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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15827#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 743 fasta sequence
[CCGACCGTCGGCATCACAAGCCATCTCCCTNTTCTCTTGTCTTGTGATCTAGCTCCCGTCGCGATCATTGTGATATAGGCATGGCCAGGTCATCGTCGTCGCTGCTCGTCCTCACGGTCCTGGTGGTGCCCGCGNCGGCGTGCTCCACTACGNCGNCGGCGCGCAGCGTCCCGGCGGAGAGAAGAAGACGGCTGCGCCGGTGCCGGCGGCGGACGTGAAGCAGCCGGAGACGTTCCACGAGGGGACGGTGTTGATCCCTGGGCTCGGGCGGTTCGAGCTCGGCAGCACCTACGTGCCGGAC-A-TCACCGGAGTCGACCACAGCGTCCCGG-C-AGCCGAG-CACGGGCAGTTCCTCCCCGG-CGCCGACGACA-CATGGGT-CCCC-AACCCCGGCTTCGAGGTGCCCAACCCCTTCCAGCCCGGCTCGTCTTCTCCCTGAATCACCCGCCGGCTCGCCGTCGTCGCCGAGCTAGCTAGCTAGGCGGCGGTTTGCCGGAGTAATAATGTGTGTGATCCCACGTGTCCCCGTCGGTGCACGGCTGCCGTAGTGGAGTCGTTTAGTTTTTCAATTGTGTGTGGATGCGTAGGATGCATTCAGATGTTTGGCTTGATCGATC-GCGTGCTTTTGTTAGCTTTGAACTCGTAATAATGTATTAATTGGTGAGTGATTATGCAAGAGCTCGGTAAAGTAATTACTGTTCACGTACTAAAAAAAGATGCAATTGGANGCTAAAAAAAAAAAAAAAAAA]
[+] EMBL AU166015 [CCGACCGTCGGCATCACAAGCCATCTCCCTNTTCTCTTGTCTTGTGATCTAGCTCCCGTCGCGATCATTGTGATATAGGCATGGCCAGGTCATCGTCGTCGCTGCTCGTCCTCACGGTCCTGGTGGTGCCCGCGNCGGCGTGCTCCACTACGNCGNCGGCGCGCAGCGTCCCGGCGGAGAGAAGAAGACGGCTGCGCCGGTGCCGGCGGCGGACGTGAAGCAGCCGGAGACGTTCCACGAGGGGACGGTGTTGATCCCTGGGCTCGGGCGGTTCGAGCTCGGCAGCACCTACGTGCCGGAC A TCACCGGAGTCGACCACAGCGTCCCGG C AGCCGAG CACGGGCAGTTCCTCCCCGG CGCCGACGACA CATGGGT CCCC AACCCCGGCTTCGAGGTGCCCAACCCCTTCCAGCCCGGCTCGTCTTCTCCCTGAATCACCCGCCGGCTCGCCGTCGTCGCCGAGCTAGCTAGCTAGGCGGCGGTTTGCCGGAGTAATAATGTGTGTGATCCCACGTGTCCCCGTCGGTGCACGGCTGCCGTAGTGGAGTCGTTTAGTTTTTCAATTGTGTGTGGATGCGTAGGATGCATTCAGATGTTTGGCTTGATCGATC GCGTGCTTTTGTTAGCTTTGAACTCGTAATAATGTATTAATTGGTGAGTGATTATGCAAGAGCTCGGTAAAGTAAaaaaaaaa ]
[+] EMBL AU223465 [ CTCGGCAGCACCTACGTGCCGGAC A TCNCCGGAGTCGACCACAGCGTCCCGG C AGCCGAG CACGGGCAGTTCCTCCCCGG CGCCGACGACA CATGGGT CCCC AACCCCGGCTTCGAGGTGCCCAACCCCTTCCAGCCCGGCTCGTCTTCTCCCTGAATCACCCGCCGGCTCGCCGTCGTCGCCGAGCTAGCTAGCTAGGCGGCGGTTTGCCGGAGTAATAATGTGTGTGATCCCACGTGTCCCCGTCGGTGCACGGCTGCCGTAGTGGAGTCGTTTAGTTTTTCAATTGTGTGTGGATGCGTAGGATGCATTCAGATGTTTGGCTTGATCGATCGGCGTGCTTTTGTTAGCTTTGAACTCGTAATAATGTATTAATTGGTGAGTGATTATGCAAGAGCTCGGTAAAGTAATTACTGTTCACGTACTAAAAAA ]
[+] EMBL AU162044 [ GCCGGACNATTCACCGGAGTCGACCACAGCGTCCCGGTCAAGCCGAGNCACGGGCAGTTCCTCCCCGGNCGCCGACGACA CATGGGT CCCC AACCCCGGCTTCGAGGTGCCCAACCCCTTCCAGCCCGGCTCGTCTTCTCCCTGAATCACCCGCCGGCTCGCCGTCGTCGCCGAGCTAGCTAGCTAGGCGGCGGTTTGCCGGAGTAATAATGTGTGTGATCCCACGTGTCCCCGTCGGTGCACGGCTGCCGTAGTGGAGTCGTTTAGTTTTTCAATTGTGTGTGGATGCGTAGGATGCATTCAGATGTTTGGCTTGATCGATC GCGTGCTTTTGTTAGCTTTGAACTCGTAATAATGTATTAATTGGTGAGTGATTAaaaa ]
[+] EMBL AU163106 [ TCCCCGN CGCCGACGACA CATGGGT CCCCAAACCCCGGCTTCGA GTGCCCAACCCTTTCCAGCCCGGCTCGTCTTCTCCCTGAATCACCCGCCGGCTCGCCGTCGTCGCCGAGCTAGCTAGCTAGGCGGCGGTTTGCCGGAGTAATAATGTGTGTGATCCCACGTGTCCCCGTCGGTGCACGGCTGCCGTAGTGGAGTCGTTTAGTTTTTCAATTGTGTGTGGATGCGTAGGATGCATTCAGATGTTTGGCTTGATCGATC GCGTGCTTTTGTTAGCTTTGAACTCGTAATAATGTATTAATTGGTGAGTGATTATGCAAGAGCTCGGTAAAGTAATTACTGTTCACGTACTAAAAAA ]
[+] EMBL AU162046 [ GACGACANCATGGGTCCCCC AACCCCGGCTTCGA GTGCCCAACCCNTTCCAGCCCGGCTCGTCTTCTCCCTGAATCACCCGCCGGCTCGCCGTCGTCGCCGAGCTAGCTAGCTAGGCGGCGGTTTGCCGGAGTAATAATGTGTGTGATCCCACGTGTCCCCGTCGGTGCACGGCTGCCGTAGTGGAGTCGTTTAGTTTTTCAATTGTGTGTGGATGCGTAGGATGCATTCAGATGTTTGGCTTGATCGATC GCGTGCTTTTGTTAGCTTTGAACTCGTAATAATGTATTAATTGGTGAGTGATTAaaa ]
[+] EMBL AU032530 [ cnTTCCAGCCCGGCTCGTCTTCTCCCTGAATCACCCGCCGGCTCGCCNTCGTCGCCGAGCTAGCTAGCTAGGCGGCGGTTTGCCGGNGTAATAATGTGTGTGATCCCACGTNTCCCCGTCGGTGCACGGCTGCCGTAGTGGAGTCGTTTAGTTTTTCAATTGTGTGTGGATGCGTAGGATGCATTCAGATGTTTGGCTTGATCGATC GCGTGCTTTTGTTAGCTTTGAACTCGTAATAATGTATTAATTGGTGAGTGATTATGCAAGAGCTCGGTAAAGTAATTACTGTTCACGTNCTAAATTAAGATGCAATTGGANGCTAAAAAAAAAAAAAAAAAA]
[+] EMBL AU094636 [ AATTGTGTGTGGATGCGTAGGATGCATTCAGATGTTTGGCTTGATCGATC GCGTGCTTTTGTTAGCTTTGAACTCGTAATAATGTAT ]
consensusID : consensus_15827#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 690 fasta sequence
[CGTGCAGCGAGCGACCGTCGGCATCACAAGCCATCTCCCTCTCTCTTGTCTTGTGATCTAGCTCCCGTCGCGATCATTGTGATATAGGCATGGCCAGGTCATCGTCGTCGCTGCTCGTCCTCACGGTCCTGGTGGTGGCCGCGGCGGCGTGCTCCACTACGGCGGCGGCGCGCA--GT-CCCGGCGGAGGAGAAGAA-GACGGCTGC-CCGG-TGGCGGCGGCGGAC-GTGAAGCA-GCCGGAGACGTTCCACGAGGGGACGGTGTTGAT-CCC-TGGGCTCGGGCGGTTCG-AGCTCGGCAGCACCTACGT-GCCGGACATCACCGGAGTCGACCACAGCGTCCCGGCAGCCGAGCACGGGCAGTTCCTCCCCGG-CG-CCGACGACACATGGGTCCCCAACCCCGGCTT-CGAGGTGCCCAA-CCCCTTCCAGCCCGGCTCGTCTTCTCCCTGAATCACCCGCCGGCTCGCCGTCGTCGCCGAGCTAGCTAGCTAGGCGGCGGTTTGCCGGAGTAATAATGTGTGTGATCCCACGTGTCCCCGTCGGTGCACGGCTGCCGTAGTGGAGTCGTTTAGTTTTTCAATTGTGTGTGGATGCGTAGGATGCATTCAGATGTTTGGCTTGATCGATCGCGTGCTTTTGTTAGCTTTGAACTCGTAATAATGTATTAATTGGTGAGTGATTATGCAAAAAAAAAAAAAAA]
[+] EMBL AU101481 [CGTCCGGCGA CGACCNTCGGCATCA AAACCATCTCCCTCTCTCTTGTCTTGTGATCTAGCTCCCGTCGCGATCATTGTGATATAGGCATGGCCAGGTCATCGTCGTCGCTGCTCGTCCTCACGGTCCTGGTGGTGGCCGCGGCGGCGTGCTCCACTACGGCGGCGGCGCGCAGCGT CCCGGCGGAGGAGAAGAANGA NCTGC CCGG TGGCGGCGGCGGAC GTGAAGCA GCCGG GACGTTCCACGAGGGGACGGTGTTGAT CCC TGGGCTCGGGCGGTTCG AGCTCGGCAGCACCTACGT GCCGGACATCACCGGAGTCGACCACAGCGTCCCGGCAGCCGAGCACGGGCAGTTCCTCCCCGG CG CCGACGACACATGGGTCCCCAACCCCGGCTT CGAGGTGCCCAA CCCCTTCCAGCCCGGCTCGTCTTCTCCCTGAATCACCCGCCGGCTCGCCGTCGTCGCCGAGCTAGCTAGCTAGGCGGCGGTTTGCCGGAGTAATAATGTGTGTGATCCCACGTGTCCCCGTCGGTGCACGGCTGCCGTAGTGGAGTCGTTTAGTTTTTCAATTGTGTGTGGATGCGTAGGATGCATTCAGATGTTTGGCTTGATCGATCGCGTGCTTTTGTTAGCTTTGAACTCGTAATAATGTATTAATTGGTGNGTNNTTATGCAAAAAAAAAAAAAAA]
[+] EMBL OSS15889A [ GCCGCGAGCNACCGTCGGCATCACAAGCCATCTCCCTCTCTCTTGTCTTGTGATCTAGCTCCCGTCGCGATCATTGTGATATAGGCATGGCCAGGTCATCGTCGTCGCTGCTCGTCCTCACGGTCCTGGTGGTGGCCGCGGCGGCGTGCTCCACTACGGCGGCGGCGCGCA GT CCCGGCGGAGGAGAAGAA GACGGCTGC GCGG TGGCGGCGGCGGAC GTNAAGCA GCCGGAGACGTTCCACGAGGGGACGGTGTTGAT CCC TGGGCTCGGGCGGTTCG AGCTCGGCAGCACCTACGT NCCGGACATCACCGGAGTCGACCACAGCNTCCCGGCAGCCGAGCACGGGCAGTTNCTTCCCGG CG CCGAAGACACATGGGT CCCAANCCCGGGTT TGAGGTGCCAAA CCCCTTTCAGCCCGGTTCGT TTTTTCCTGAATAACCCGCCGGtt ]
[+] EMBL OSS10681A [ GCAGCGAGCNACCGTCGGCATCACAAGCCATCTCCCTCTCTCTTGTCTTGTGATCTAGCTCCCGTCGCGATCATTGTNATATAGGCATGGCCAGGTCATCGTCGTCGCTGCTCGTCCTCACGGTCCTGGTGGTGGCCGCGGCGGCGTGCTCCACTACGGCGGCGGCGCGCA GTCCCCGGCGGAGGAGAAGAA GACGGCTGCGCNGT TGGCGGCGGCGGAC GTNAAGNA GCCGGAGACGTTCCACGAGGGGACGGTGTTGAT CCC TGGGNTCGGGCGGTTCG AGNTCGGAAG ACCTACGT NCCGGANATAACCG ]
[+] EMBL AU064422 [ GCAGCGAGCGACCGTCGGCATCACAAGCCATCTCCCTCTCTCTTGTCTTGTGATCTAGCTCCCGTCGCGATCATTGTGATATAGGCATGGCCAGGTCATCGTCGTCGCTGCTCGTCCTCACNGTCCTGGTGGTGGCCGCGGCGGCGTGCTCCACTACGGCGGCGGCGCGCA GT CCCGGCGGAGGAGAAGAA GACGGCTGC NCNG TGGCGGCGGCGGAC GTNAAGCA GCCGGAGACGTTCCACGAGGGGACGGTGTTGAT CCCTTGGGCTCGGGCGGTTCGAAGCTCGGCAGCACCTACGTNCCCGGACATCACCGGA ]
[+] EMBL AK062834 [ AGCGAGCGACCGTCGGCATCACAAGCCATCTCCCTCTCTCTTGTCTTGTGATCTAGCTCCCGTCGCGATCATTGTGATATAGGCATGGCCAGGTCATCGTCGTCGCTGCTCGTCCTCACGGTCCTGGTGGTGGCCGCGGCGGCGTGCTCCACTACGGCGGCGGCGCGCAGCGT CCCGGCGGAGGAGAAGAA GACGGCTGCGCCGG TGGCGGCGGCGGAC GTGAAGCA GCCGGAGACGTTCCACGAGGGGACGGTGTTGAT CCC TGGGCTCGGGCGGTTCG AGCTCGGCAGCACCTACGT GCCGGACATCACCGGAGTCGACCACAGCGTCCCGGCAGCCGAGCACGGGCAGTTCCTCCCCGG CG CCGACGACACATGGGTCCCCAACCCCGGCTT CGAGGTGCCCAA CCCCTTCCAGCCCGGCTCGTCTTCTCCCTGAATCACCCGCCGGCTCGCCGTCGTCGCCGAGCTAGCTAGCTAGGCGGCGGTTTGCCGGAGTAATAATGTGTGTGATCCCACGTGTCCCCGTCGGTGCACGGCTGCCGTAGTGGAGTCGTTTAGTTTTTCAATTGTGTGTGGATGCGTAGGATGCATTCAGATGTTTGGCTTGATCGATCGCGTGCTTTTGTTAGCTTTGAACTCGTAATAATGTATTAATTGGTGA ]
[+] EMBL OSS15583A [ GCGAGCGACCGTCGGCATCACAAGCCATCTCCCTCTCTCTTGTCTTGTGATCTAGCTCCCGTCGCGATCATTGTGATATAGGCATGGCCAGGTCATCGTCGTCGCTGCTCGTCCTCACGGTCCTGGTGGTGGCCGCGGCGGCGTGCTCCACTACGGCGGCGGCGCGCA GT CCCGGCGGAGGAGAAGAA GACGGCTGCGCCGG TGGCGGCGGCGGAC GTGAAGCA GCCGGAGACGTTCCACGAGGGGACGGTGTTGAT CCC TGGGCTCGGGCGGTTCG AGCTCGGCAGCACCTACGT GCCGGACATCACCGGAGTCGACCACAGCGTCCCGGCAGCCGAGCACGGGCAGTTCCTTCCCGG CG CCGACGACACATGGGTNCC ]
[+] EMBL OSS15588A [ GCGAGCGACCGTCGGCATCACAAGCCATCTCCCTCTCTCTTGTCTTGTGATCTAGCTCCCGTCGCGATCATTGTGATATAGGCATGGCCAGGTCATCGTCGTCGCTGCTCGTCCTCACGGTCCTGGTGGTGGCCGCGGCGGCGTGCTCCACTACGGCGGCGGCGCGCA GT CCCGGCGGAGGAGAAGAA GACGGCTGCNCCGG TGGCGGCGGCGGAC GTNAAGCA GCCGGAGACGTTCCACGAGGGGACGGTGTTGAT CCC TGGGCTCGGGCGGTTCG AGCTCGGCAGCACCTACGT NCCGGACATCACCGGAGTCGACCACAGCNTCCCGGCAGCCGAGCACGGGCAGTTCCTCCCCGG CG NCGACGACACATGGGTCCCCAACCCCGGCTT CGAGGTGCCCAA a ]
[+] EMBL C74174 [ CCGTCGGCATCACAAGCCATCTCCCTCTCTCTTGTCTTGTGATCTAGCTCCCGTCGCGATCATTGTGATATAGGCATGGCCAGGTCATCGTCGTCGCTGCTCGTCCTCACGGTCCTGGTGGTGGCCGCGGCGGCGTGCTCCACTACGGNGGCGGCGCGCA GT CCCGGCGGAGGATAAGAA GACGGCTGC GCGG TTNGGGCGGCGGAC GTGAAGCA GCCGGAGANGTTCCACGAGG ]
[+] EMBL OSS15529A [ CATCACAAGCCATCTCCCTCTCTCTTGTCTTGTGATCTAGCTCCCGTCGCGATCATTGTGATATAGGCATGGCCAGGTCATCGTCGTCGCTGCTCGTCCTCACGGTCCTGGTGGTGGCCGCGGCGGCGTGCTCCACTACGGCGGCGGCGCGCA GT CCCGGCGGAGGAGAAGAA GACGGCTGC GCNG TTGGGGCGGCGGAC GTNAAGCA GCCGGAGACGTTCCACGAGGGGACGGTGTTGAT CCC TGGGCTCGGGCGGTTCG AGCTCGGCAGCACCTACGT GCCGGACATCACCGGAGTCGACCACAGCGTCCCGGCAGCCGAGCACGGGCAGTTCCTTCCCGG CG GCGACGACANATGGGTCCCCAAACCCGGGTT TGAGGTGCCCA ]
[+] EMBL AU065882 [ CATCACAAGCCATCTCCCTCTCTCTTGTCTTGTGATCTAGCTCCCGTCGCGATCATTGTGATATAGGCATGGCCAGGTCATCGTCGTCGCTGCTCGTCCTCACGGTCCTGGTGGTGGNCGNGNCGGCGTGCTCCACTACGGCGGCGNCGCGCA GT CCCGGCGNAGGAGAAGAA GACGNCTGC GCGGTTGNCGGCGGCGGAC GTGAAGCA GCCGNAGACGTTCCACGAGNGGACGGTGTTGAT CCC TGGGCTCGNGCGGTTC ]
[+] EMBL BM037683 [ TACGGC GCGGCGCGCAGCGT CCC GCGGAGGAGAAGAA GACGGCTGC GCCG CGCGGC GCGGAC GTGAAGCA GCCGGAGACGTTCCACGAGGGGACGGTGTTGATCCCC TGGGCTC GGCGGTTCG AGCTCGGCAGCACCTACGT GCCGGACATCACCGGAGTCGACCACAGCGTCCCGGCAGCCGAGCACGGGCAGTTCCTCCCCGG CG CCGACGACACATGGGTCCCCAACCCCGGCTT CGAGGTGCCCAA CCCCTTCCAGCCCGGCTCGTCTTCTCCCTGAATCACCCGCCGGCTCGCCGTCGTCGCCGAGCTAGCTAGCTAGGCGGCGGTTTGCCGGAGTAATAATGTGTGTGATCCCACGTGTCCCCGTCGGTGCACGGCTGCCGTAGTGGAGTCGTTTAGTTTTTCAATTGTGTGTGGATGCGTAGGATGCATTCAGATGTTTGGCTTGATCGATCGCGTGCTTTTGTTAGCTTTGAACTCGTAATAATGTATTAATTGGTGAGTGATTATGCCAAAAAAA ]
[+] EMBL AU166048 [ gc GT CCCGGCGGAGGAGAAGAA GACGGCTGCGCCGG TGCCGNCGGCGGAC GTGAAGCA GCCGGAGACGTTCCACGAGGGGACGGTGTTGAT CCC TGGGCTCGGGCGGTTCG AGCTCGGCAGCACCTACGT GCCGGACATCACCGGAGTCGACCACAGCGTCCCGGCAGCCGAGCACGGGCAGTTCCTCCCCGG CG CCGACGACACATGGGTCCCCAACCCCGGCTT CGAGGTGCCCAA CCCCTTCCAGCCCGGCTCGTCTTCTCCCTGAATCACCCGCCGGCTCGCCGTCGTCGCCGAGCTAGCTAGCTAGGCGGCGGTTTGCCGGAGTAATAATGTGTGTGATCCCACGTGTCCCCGTCGGTGCACGGCTGCCGTAGTGGAGTCGTTTAGTTTTTCAATTGTGTGTGGATGCGTAGGATGCATTCAGATGTTTGGCTTGATCGATCGCGTGCTTTTGTTAGCTTTGAACTCGTAATAATGTATTAATTGGTGAGTGATTATGCAAAAAAAA ]
[+] EMBL BI805065 [ ACGGCTGCGCCGG CGGC GC GCGGACTGTGAA CACGCCGGAGACGTTCCACGAGGGGACGGTGTTGAT CCC TGGGCTC GGCGGTTCG AGCTC GCAGCACCTACGT GCCGGACATCACCGGAGTCGACCACAGCGTCCCGGCAGCCGAGCACGGGCAGTTCCTCCCCGG CG CCGACGACACATGGGTCCCCAACCCCGGCTT CGAGGTGCCCAA CCCCTTCCAGCCCGGCTCGTCTTCTCCCTGAATCACCCGCCGGCTCGCCGTCGTCGCCGAGCTAGCTAGCTAGGCGGCGGTTTGCCGGAGTAATAATGTGTGTGATCCCACGTGTCCCCGTCGGTGCACGGCTGCCGTAGTGGAGTCGTTTAGTTTTTCAATTGTGTGTGGATGCGTAGGATGCATTCAGATGTTTGGCTTGATCGATCGCGTGCTTTTGTTAGCTTTGAACTCGTAATAATGTATTAATTGGTGAGTGATTATGCAAAAAAAAAA ]
[+] EMBL AU162085 [ TCCCCGGTCGCCCGACGACACAT GGTCCCCAACCCCGGCTTCCGA GTGCCCAANCCCCTTCCAGCCCGGCTCGTCTTCTCCCTGAATCACCCGCCGGCTCGCCGTCGTCGCCGAGCTAGCTAGCTAGGCGGCGGTTTGCCGGAGTAATAATGTGTGTGATCCCACGTGTCCCCGTCGGTGCACGGCTGCCGTAGTGGAGTCGTTTAGTTTTTCAATTGTGTGTGGATGCGTAGGATGCATTCAGATGTTTGGCTTGATCGATCGCGTGCTTTTGTTAGCTTTGAACTCGTAATAATGTATTAATTGGTGAGTGATTATGCAAAAAA ]
consensusID : consensus_15827#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 402 fasta sequence
[GTCAANGNCTTAGCGANCCTGTCGGCATCACAAGCCATCTCCCTCTCTCTTGTCTTGTGATCTAGCTCCCNTCGCGATCATTGTGATATAGGCATGG-CAGGTCATCGTCGTCGCTGCTCGTCCTCACGGTCCTGGTGGTNGCCGCGGC-GNGTGCTCCACTACGGCGGCGGCNCGCAGTCCCGGCGGAGGAGAAGAAGACGGCTNCGCTTGNGCGCGGCNGANCGTGAAGCAGCCGGAGACGTTCCACGAGGGGACGGTGTTGATCCCTGGGCTCGGGCGGTTCGACTCGGCANACTACGTNCCGGACATCACCGGAGTCGACACAGCGTCCCGGCACCGACACGGGAGTTCTTCCCGGCGCGACANAATGGTCCAACCGGTTCGAGTGCCACCCNTCACCGG]
[+] EMBL OSS15224A [GTCAANGNCTTAGCGANCCTGTCGGCATCACAAGCCATCTCCCTCTCTCTTGTCTTGTGATCTAGCTCCCNTCGCGATCATTGTGATATAGGCATGG CAGGTCATCGTCGTCGCTGCTCGTCCTCACGGTCCTGGTGGTNGCCGCGGC GNGTGCTCCACTACGGCGGCGGCNCGCAGTCCCGGCGGAGGAGAAGAAGACGGCTNCGCTTGNGCGCGGCNGANCGTGAAGCAGCCGGAGACGT ]
[+] EMBL AU058400 [ GTCGGCATCACAAGCCATCTCCCTCTCTCTTGTCTTGTGATCNAGCTCCCGTCGCGATCATTGTGATATAGGCATGGCCAGGTCATCGTCGTCGCTGCTCGTCCTCACGGTCCTGGTGGTGGCCGCGGCGGCGTGCTCCACTACGGCGGCGGCGCGCAGTCCCGGCGGAGGAGAAGAAGACGGCTGCGNGTG GGGCGGCGGA CGTGAAGCAGCCGG GACGTTCCACGAGGGGACGGTGTTGATCCCTGGGCTCGGGCGGTTCGACTCGGCANACTACGTNCCGGACATCACCGGAGTCGACACAGCGTCCCGGCACCGACACGGGAGTTCTTCCCGGCGCGACANAATGGTCCAACCGGTTCGAGTGCCACCCNTCACCGG]
consensusID : consensus_15827#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 243 fasta sequence
[CGTCGGCATCACAAGCCATCTCCCTCTCTCTTGTNTTGTGATCTTGCTNCCGTCGCGATCATTGTNATATAGGCATGGCCAGGTCATCGTCGTCGCTGCTCGTCCTCACGGTCCTGGTGGTGGCCGCGGCGGCGTGCTCCACTACGGNGGCGGCGCGCAGTNCCGTNCGNAGGNGAAGAAGANGGCTGCGTCNGTGGCGGNGGNGGACGTAAAGCAGCCGNAGACGTTCCACGAGGGGACGGT]
[+] EMBL AU070643 [CGTCGGCATCACAAGCCATCTCCCTCTCTCTTGTNTTGTGATCTTGCTNCCGTCGCGATCATTGTNATATAGGCATGGCCAGGTCATCGTCGTCGCTGCTCGTCCTCACGGTCCTGGTGGTGGCCGCGGCGGCGTGCTCCACTACGGNGGCGGCGCGCAGTNCCGTNCGNAGGNGAAGAAGANGGCTGCGTCNGTGGCGGNGGNGGACGTAAAGCAGCCGNAGACGTTCCACGAGGGGACGGT]
consensusID : consensus_15827#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 165 fasta sequence
[GTGCTTTTGTTAGCTTTGAACTCGTAATAATGTATTAATTGGTGAGTGATTATGCAAGAGCTCGGTAAAGTAATTACTGTTCACGTACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAN]
[+] EMBL AU094651 [GTGCTTTTGTTAGCTTTGAACTCGTAATAATGTATTAATTGGTGAGTGATTATGCAAGAGCTCGGTAAAGTAATTACTGTTCACGTACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAN]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15827#2 GTCAANGNCTTAGCGANCCTGTCGGCATCACAAGCCATCTCCCTCT-CTCTTGTCTTGTG 59
consensus_15827#3 -------------------CGTCGGCATCACAAGCCATCTCCCTCT-CTCTTGTNTTGTG 40
consensus_15827#1 ----CGTGCAGCGAGCGACCGTCGGCATCACAAGCCATCTCCCTCT-CTCTTGTCTTGTG 55
consensus_15827#0 --------------CCGACCGTCGGCATCACAAGCCATCTCCCTNTTCTCTTGTCTTGTG 46
consensus_15827#4 ---------------------------------------------------------GTG 3
***
consensus_15827#2 ATCTAGCTCCCNTCGCGATCATTGTGATATAGGCATGGC-AGGTCATCGTCGTCGCTGCT 118
consensus_15827#3 ATCTTGCTNCCGTCGCGATCATTGTNATATAGGCATGGCCAGGTCATCGTCGTCGCTGCT 100
consensus_15827#1 ATCTAGCTCCCGTCGCGATCATTGTGATATAGGCATGGCCAGGTCATCGTCGTCGCTGCT 115
consensus_15827#0 ATCTAGCTCCCGTCGCGATCATTGTGATATAGGCATGGCCAGGTCATCGTCGTCGCTGCT 106
consensus_15827#4 CTTTTGTTAGCTTTGAACTCGTAATAATGTATTAATTGGTGAGTGATTAT-------GCA 56
* * * * * * * ** * * ** ** ** * ** ** * **
consensus_15827#2 CGTCCTCACGGTCCTGGTGGTNGCCGCGGCGN-GTGCTCCACTACGGCGGCGGCNCGCAG 177
consensus_15827#3 CGTCCTCACGGTCCTGGTGGTGGCCGCGGCGGCGTGCTCCACTACGGNGGCGGCGCGCAG 160
consensus_15827#1 CGTCCTCACGGTCCTGGTGGTGGCCGCGGCGGCGTGCTCCACTACGGCGGCGGCGCGCAG 175
consensus_15827#0 CGTCCTCACGGTCCTGGTGGTGCCCGCGNCGGCGTGCTCCACTACGNCGNCGGCGCGCAG 166
consensus_15827#4 AGAGCTC---GGTAAAGTAATTACTGT--TCACGTACTAAAAAAAAAAAAAAAAAAAAAA 111
* *** * ** * * * ** ** * * *
consensus_15827#2 TCCCG-GCGGAGGAGAAGAAGACGGCTNCGCTTGNG-CGCGGCNGANCGTGAAGCAGCCG 235
consensus_15827#3 TNCCGTNCGNAGGNGAAGAAGANGGCTGCGTCNGTGGCGGNGGNGGACGTAAAGCAGCCG 220
consensus_15827#1 TCCCG-GCGGAGGAGAAGAAGACGGCTGC-CCGGTGGCGGCGGCGGACGTGAAGCAGCCG 233
consensus_15827#0 CGTCCCGGCGGAGAGAAGAAGACGGCTGCGCCGGTGCCGGCGGCGGACGTGAAGCAGCCG 226
consensus_15827#4 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAN------ 165
** ** * **
consensus_15827#2 GAGACGTTCCACGAGGGGACGGTGTTGATCCCTGGGCTCGGGCGGTTCGA-CTCGGCANA 294
consensus_15827#3 NAGACGTTCCACGAGGGGACGGT------------------------------------- 243
consensus_15827#1 GAGACGTTCCACGAGGGGACGGTGTTGATCCCTGGGCTCGGGCGGTTCGAGCTCGGCAGC 293
consensus_15827#0 GAGACGTTCCACGAGGGGACGGTGTTGATCCCTGGGCTCGGGCGGTTCGAGCTCGGCAGC 286
consensus_15827#4 ------------------------------------------------------------
consensus_15827#2 --CTACGTNCCGGACATCACCGGAGTCGAC-ACAGCGTCCCGGCACCGACACGGGAGTTC 351
consensus_15827#3 ------------------------------------------------------------
consensus_15827#1 ACCTACGTGCCGGACATCACCGGAGTCGACCACAGCGTCCCGGCAGCCGAGCACGGGCAG 353
consensus_15827#0 ACCTACGTGCCGGACATCACCGGAGTCGACCACAGCGTCCCGGCAGCCGAGCACGGGCAG 346
consensus_15827#4 ------------------------------------------------------------
consensus_15827#2 TTCCCGGCGCGACANAATGGTCCAACCGGTTCGAGTGCCACCCNTCACCGG--------- 402
consensus_15827#3 ------------------------------------------------------------
consensus_15827#1 TTCCTCCCCGGCGCCGACGACACATGGGTCCCCAACCCCGGCTTCGAGGTGCCCAACCCC 413
consensus_15827#0 TTCCTCCCCGGCGCCGACGACACATGGGTCCCCAACCCCGGCTTCGAGGTGCCCAACCCC 406
consensus_15827#4 ------------------------------------------------------------
consensus_15827#2 ------------------------------------------------------------
consensus_15827#3 ------------------------------------------------------------
consensus_15827#1 TTCCAGCCCGGCTCGTCTTCTCCCTGAATCACCCGCCGGCTCGCCGTCGTCGCCGAGCTA 473
consensus_15827#0 TTCCAGCCCGGCTCGTCTTCTCCCTGAATCACCCGCCGGCTCGCCGTCGTCGCCGAGCTA 466
consensus_15827#4 ------------------------------------------------------------
consensus_15827#2 ------------------------------------------------------------
consensus_15827#3 ------------------------------------------------------------
consensus_15827#1 GCTAGCTAGGCGGCGGTTTGCCGGAGTAATAATGTGTGTGATCCCACGTGTCCCCGTCGG 533
consensus_15827#0 GCTAGCTAGGCGGCGGTTTGCCGGAGTAATAATGTGTGTGATCCCACGTGTCCCCGTCGG 526
consensus_15827#4 ------------------------------------------------------------
consensus_15827#2 ------------------------------------------------------------
consensus_15827#3 ------------------------------------------------------------
consensus_15827#1 TGCACGGCTGCCGTAGTGGAGTCGTTTAGTTTTTCAATTGTGTGTGGATGCGTAGGATGC 593
consensus_15827#0 TGCACGGCTGCCGTAGTGGAGTCGTTTAGTTTTTCAATTGTGTGTGGATGCGTAGGATGC 586
consensus_15827#4 ------------------------------------------------------------
consensus_15827#2 ------------------------------------------------------------
consensus_15827#3 ------------------------------------------------------------
consensus_15827#1 ATTCAGATGTTTGGCTTGATCGATCGCGTGCTTTTGTTAGCTTTGAACTCGTAATAATGT 653
consensus_15827#0 ATTCAGATGTTTGGCTTGATCGATCGCGTGCTTTTGTTAGCTTTGAACTCGTAATAATGT 646
consensus_15827#4 ------------------------------------------------------------
consensus_15827#2 ------------------------------------------------------------
consensus_15827#3 ------------------------------------------------------------
consensus_15827#1 ATTAATTGGTGAGTGATTATGCAAAAAAAAAAAAAAA----------------------- 690
consensus_15827#0 ATTAATTGGTGAGTGATTATGCAAGAGCTCGGTAAAGTAATTACTGTTCACGTACTAAAA 706
consensus_15827#4 ------------------------------------------------------------
consensus_15827#2 -------------------------------------
consensus_15827#3 -------------------------------------
consensus_15827#1 -------------------------------------
consensus_15827#0 AAAGATGCAATTGGANGCTAAAAAAAAAAAAAAAAAA 743
consensus_15827#4 -------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||