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Oryza sativa
cluster # 15866 cluster # 15866       Sequences # 25       consensus # 7


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15866#0 length = 1082 sequences # 6  
consensus_15866#1 length = 988 sequences # 3  
consensus_15866#2 length = 793 sequences # 10  
consensus_15866#3 length = 669 sequences # 3  
consensus_15866#4 length = 587 sequences # 1  
consensus_15866#5 length = 391 sequences # 1  
consensus_15866#6 length = 331 sequences # 1  

consensusID : consensus_15866#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1082
fasta sequence
                              [AAGAAATCTGCCGTCTCGCTCTCGTTGTCTCCTCCGCTCCTTGCGCCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGCGCCGGGCGGCGAGCTCCATCTGGCGAGCAGAGCAGAGCAGCGGAGGGGAGGGGATCCTGGAATCAGGACATAGATGGATCCAGAGGTGAAGGACTCAAGGCCATCGAGGTCTCCCGGCGAACCAAATCTTTTCCTGCAATGGGGCAGCCGGAAACGACTCCGCTGTGTCAAGACGAGGGACGACGGCTCGCCATCACCTGCGCGGACCGATGTTCTTAGGCGCACCATACCACGAGTGAATCGCCCGCTTGGCGGTGATGTTGCCCCGTTTCGTTCGCCGCGGCGCCCGAGCACGCTGAACCGAAGGAAAACCGAGCCATTTGTGAGCGATAACAGGCACTCCATGTCACTCTCGCCAGAGAAGGATCGATATTACTCCACTAGGGGTTCTCCATTCCCATTCGAGGGAAATGGGTTTGATTTTGGTGGTGGAATGGAAGAAAAGGGAACCACAGCACTGCCAAGGTTCTTCATTTCATTATCCAACAAGGAGAAAGAAGAGGACTTCATGGCAATGAAGGGATGCAAGCTCCCACAGAGGCCGAAGAAGAGGCCAAAGTTGATGCAGAAGTGCTTGCTTATGGTAAGTCCAGGAGCATGGCTGTCTGATTTGTCTCATGAGAGGTATGAAGTTAGAGAGAAGAAGTGCGCTAGAAAGAGGGCTAGAGGATTGAAGGCTCTTTGCAATGAGAGTGATTCAGAATAGAAATACAGAGCGGGATCAATTTTTTTTGACTTTTGCTGGAGACAGTTAGGTACAATGCTGGTTCATTCATTAACTAGACAGATCTGAGCGGCTAATTTAGAGAGGGAGGATCACCGGCTCTCCTACTATCCTTATTTCACCACCCCTGTATCTCCATCCTTTTTTTGTTCATTCGTTGTTCCAAACAAATCGTCATCTAGAACTAAGCCTATCGACCGAAATAGTTGTATATTAGATCATTCCTGATCTAGCAAGTTTGTAGCTCAGACCTTAAAGGCACCGCGGAGTTTGGTCA]

[+] EMBL AK103496             [AAGAAATCTGCCGTCTCGCTCTCGTTGTCTCCTCCGCTCCTTGCGCCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGCGCCGGGCGGCGAGCTCCATCTGGCGAGCAGAGCAGAGCAGCGGAGGGGAGGGGATCCTGGAATCAGGACATAGATGGATCCAGAGGTGAAGGACTCAAGGCCATCGAGGTCTCCCGGCGAACCAAATCTTTTCCTGCAATGGGGCAGCCGGAAACGACTCCGCTGTGTCAAGACGAGGGACGACGGCTCGCCATCACCTGCGCGGACCGATGTTCTTAGGCGCACCATACCACGAGTGAATCGCCCGCTTGGCGGTGATGTTGCCCCGTTTCGTTCGCCGCGGCGCCCGAGCACGCTGAACCGAAGGAAAACCGAGCCATTTGTGAGCGATAACAGGCACTCCATGTCACCCTCGCCAGAGAAGGATCGATATTACTCCACTAGGGGTTCTCCATTCCCATTCGAGGGAAATGGGTTTGATTTTGGTGGTGGAATGGAAGAAAAGGGAACCACAGCACTGCCAAGGTTCTTCATTTCATTATCCAACAAGGAGAAAGAAGAGGACTTCATGGCAATGAAGGGATGCAAGCTCCCACAGAGGCCGAAGAAGAGGCCAAAGTTGATGCAGAAGTGCTTGCTTATGGTAAGTCCAGGAGCATGGCTGTCTGATTTGTCTCATGAGAGGTATGAAGTTAGAGAGAAGAAGTGCGCTAGAAAGAGGGCTAGAGGATTGAAGGCTCTTTGCAATGAGAGTGATTCAGAATAGAAATACAGAGCGGGATCAATTTTTTTTGACTTTTGCTGGAGACAGTTAGGTACAATGCTGGTTCATTCATTAACTAGACAGATCTGAGCGGCTAATTTAGAGAGGGAGGATCACCGGCTCTCCTACTATCCTTATTTCACCACCCCTGTATCTCCATCCTTTTTTTGTTCATTCGTTGTTCCAAACAAATCGTCATCTAGAACTAAGCCTATCGACAGAAATAGTTGTATATTAGATCATTCCTGATCTAGCAAGTTTGTAGCTCAGACCTTAAAGGCACCGCGGAGTTTGGTCA]
[+] EMBL AK063932             [ AGAAATCTGCCGTCTCGCTCTCGTTGTCTCCTCCGCTCCTTGCGCCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGCGCCGGGCGGCGAGCTCCATCTGGCGAGCAGAGCAGAGCAGCGGAGGGGAGGGGATCCTGGAATCAGGACATAGATGGATCCAGAGGTGAAGGACTCAAGGCCATCGAGGTCTCCCGGCGAACCAAATCTTTTCCTGCAATGGGGCAGCCGGAAACGACTCCGCTGTGTCAAGACGAGGGACGACGGCTCGCCATCACCTGGGCGGACCGATGTTCTTAGGCGCACCATACCACGAGTGAATCGCCCGCTTGGCGGTGATGTTGCCCCGTTTCGTTCGCCGCGGCGCCCGAGCACGCTGAACCGAAGGAAAACCGAGCCATTTGTGAGCGATAACAGGCACTCCATGTCACTCTCGCCAGAGAAGGATCGATATTACTCCACTAGGGGTTCTCCATTCCCATTCGAGGGAAATGGGTTTGATTTTGGTGGTGGAATGGAAGAAAAGGGAACCACAGCACTGCCAAGGTTCTTCATTTCATTATCCAACAAGGAGAAAGAAGAGGACTTCATGGCAATGAAGGGATGCAAGCTCCCACAGAGGCCGAAGAAGAGGCCAAAGTTGATGCAGAAGTGCTTGCTTATGGTAAGTCCAGGAGCATGGCTGTCTGATTTGTCTCATGAGAGGTATGAAGTTAGAGAGAAGAAGTGCGCTAGAAAGAGGGCTAGAGGATTGAAGGCTCTTTGCAATGAGAGTGATTCAGAATAGAAATACAGAGCGGGATCAATTTTTTTTGACTTTTGCTGGAGACAGTTAGGTACAATGCTGGTTCATTCATTAACTAGACAGATCTGAGCGGCTAATTTAGAGAGGGAGGATCACCGGCTCTCCTACTATCCTTATTTCACCACCCCTGTATCTCCATCCTTTTTTTGTTCATTCGTTGTTCCAAACAAATCGTCATCTAGAACTAAGCCTATCGACCGAAATAGTTGTATATTAGATCATTCCTGATCTAGCAAGTTTGTAGCTCAGACCTTAAAGGCACCGCGGAGTTTGGTCA]
[+] EMBL CF325510             [             TCTCGCTCTCGTTGTCTCCTCCGCTCCTTGCGCCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGCGCCGGGCGGCGAGCTCCATCTGGCGAGCAGAGCAGAGCAGCGGAGGGGAGGGGATCCTGGAATCAGGACATAGATGGATCCAGAGGTGAAGGACTCAAGGCCATCGAGGTCTCCCGGCGAACCAAATCTTTTCCTGCAATGGGGCAGCCGGAAACGACTCCGCTGTGTCAAGACGAGGGACGACGGCTCGCCATCACCTGCGCGGACCGATGTTCTTAGGCGCACCATACCACGAGTGAATCGCCCGCTTGGCGGTGATGTTGCCCCGTTTCGTTCGCCGCGGCGCCCGAGCACGCTGAACCGAAGGAAAACCGAGCCATTTGTGAGCGATAACAGGCACTCCATGTCACTCTCGCCAGAGAAGGATCGATATTACTCCACTAGGGGTTCTCCATTCCCATTCGAGGGAAATGGGTTTGATTTTGGTGGTGGAATGGAAGAAAAGGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU174248             [                         TGTCTCCTCCGCTCCTTGCGCCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGCGCCGGGCGGCGAGCTCCATCTGGCGAGCAGAGCAGAGCAGCGGAGGGGAGGGGATCCTGGAATCAGGACATAGATGGATCCAGAGGTGAAGGACTCAAGGCCATCGAGGTCTCCCGGCGAACCAAATCTTTTCCTGCAATGGGGCAGCCGGAAACGACTCCGCTGTGTCAAGACGAGGGACGACGGCTCGCCATCACCTGCGCGGACCGATGTTCTTAGGCGCACCATACCACGAGTGAATCGCCCGCTTGGCGGTGATGTTGCCCCGTTTCGTTCGCCGCGGCGCCCGAGCACGCTGAACCGAAGGAAAACCGAGCCATTTGTGAGCGATAACAGGCACTCCATGTCACTCTCGCCAGAGAAGGATCGATATTACTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CA756416             [                                                                                                                                                                                                                                                                                                                                                                                                           AGCCATTTGTGAGCGATAACAGGCACTCCATGTCACTCTCGCCAGAGAAGGATCGATATTACTCCACTAGGGGTTCTCCATTCCCATTCGAGGGAAATGGGTTTGATTTTGGTGGTGGAATGGAAGAAAAGGGAACCACAGCACTGCCAAGGTTCTTCATTTCATTATCCAACAAGGAGAAAGAAGAGGACTTCATGGCAATGAAGGGATGCAAGCTCCCACAGAGGCCGAAGAAGAGGCCAAAGTTGATGCAGAAGTGCTTGCTTATGGTAAGTCCAGGAGCATGGCTGTCTGATTTGTCTCATGAGAGGTATGAAGTTAGAGAGAAGAAGTGCGCTAGAAAGAGGGCTAGAGGATTGAAGGCTCTTTGCAATGAGAGTGATTCAGAATAGAAATACAGAGCGGGATCAATTTTTTTTGACTTTTGCTGGAGACAGTTAGGTACAATGCTGGTTCATTCATTAACTAGACAGATCTGAGCGGCTAATTTAGAGAGGGAGGATCACCGGCTCTCCTACTATCCTTATNTCACCACCCCTGTATCTCCATCCTTTTTTTGTTCATTCGTTGTTCCAAAC AATCGTCATCTAGAACTAAGCCTATC                                                                                  ]
[+] EMBL AK122072             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATTGAAGGCTCTTTGCAATGAGAGTGATTCAGAATAGAAATACAGAGCGGGATCAATTTTTTTTGACTTTTGCTGGAGACAGTTAGGTACAATGCTGGTTCATTCATTAACTAGACAGATCTGAGCGGCTAATTTAGAGAGGGAGGATCACCGGCTCTCCTACTATCCTTATTTCACCACCCCTGTATCTCCATCCTTTTTTTGTTCATTCGTTGTTCCAAACAAATCGTCATCTAGAACTAAGCCTATCGACCGAAATAGTTGTATATTAGATCATTCCTGATCTAGCAAGTTTGTAGCTCAGACCTTAAAGGCACCGCGGAGTTTGGTCA]


>consensus_15866#0 AAGAAATCTGCCGTCTCGCTCTCGTTGTCTCCTCCGCTCCTTGCGCCGCCGCCAAGACGA GTCGCGGCTGAACAGGGGAGCGCCGGGCGGCGAGCTCCATCTGGCGAGCAGAGCAGAGCA GCGGAGGGGAGGGGATCCTGGAATCAGGACATAGATGGATCCAGAGGTGAAGGACTCAAG GCCATCGAGGTCTCCCGGCGAACCAAATCTTTTCCTGCAATGGGGCAGCCGGAAACGACT CCGCTGTGTCAAGACGAGGGACGACGGCTCGCCATCACCTGCGCGGACCGATGTTCTTAG GCGCACCATACCACGAGTGAATCGCCCGCTTGGCGGTGATGTTGCCCCGTTTCGTTCGCC GCGGCGCCCGAGCACGCTGAACCGAAGGAAAACCGAGCCATTTGTGAGCGATAACAGGCA CTCCATGTCACTCTCGCCAGAGAAGGATCGATATTACTCCACTAGGGGTTCTCCATTCCC ATTCGAGGGAAATGGGTTTGATTTTGGTGGTGGAATGGAAGAAAAGGGAACCACAGCACT GCCAAGGTTCTTCATTTCATTATCCAACAAGGAGAAAGAAGAGGACTTCATGGCAATGAA GGGATGCAAGCTCCCACAGAGGCCGAAGAAGAGGCCAAAGTTGATGCAGAAGTGCTTGCT TATGGTAAGTCCAGGAGCATGGCTGTCTGATTTGTCTCATGAGAGGTATGAAGTTAGAGA GAAGAAGTGCGCTAGAAAGAGGGCTAGAGGATTGAAGGCTCTTTGCAATGAGAGTGATTC AGAATAGAAATACAGAGCGGGATCAATTTTTTTTGACTTTTGCTGGAGACAGTTAGGTAC AATGCTGGTTCATTCATTAACTAGACAGATCTGAGCGGCTAATTTAGAGAGGGAGGATCA CCGGCTCTCCTACTATCCTTATTTCACCACCCCTGTATCTCCATCCTTTTTTTGTTCATT CGTTGTTCCAAACAAATCGTCATCTAGAACTAAGCCTATCGACCGAAATAGTTGTATATT AGATCATTCCTGATCTAGCAAGTTTGTAGCTCAGACCTTAAAGGCACCGCGGAGTTTGGT CA



consensusID : consensus_15866#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 988
fasta sequence
                              [TTGTGTGTGGTTCAGGTTCAGGTTCAGGGGCATCTCTCCTCTTTTCTTTCCCTTGCCGCCATTAGCCCAAGCAGCTATCTGGATTCTGGAGAGTTGTTCTCTGGTACTAGTTCTCTAGCGCACGAACAACATCCGCGACGAAGCGCATCCATGGCAGTGGCACCGACGAGAGCGGAGGCACTGTCCCTCTTCCGGTCCCTCCTCCGCACGGCAAGGCAGTTCTCTGACTACAACATCCGCGAGTACACGCGCCGCCGCGCCGCGGACGCCTTCCGTGAGAACCGTGCCCTCGGCGACACGGCTGCCGCGGCGGCAGCATTCGCGGACGGGAAGAAGCAGCTGGAGGTGGCAAAGCGGCAGGCGGTGGTGTACTCTCTGTACGCCCCAAAGGCCAAGAGCATCATGGAGATGAAGTTGCAGTGATCGACGCGAGAGGTTTCGTGCTCTCTTGCTTGCTGTCCTCTTACTCAGGATTTCTTTCTGCTCTGTTTCTAAAGTTATGTGATAGGTTCGAGGAAAATTGGTGCAATCAAAGCTGAGATGTTATCATGTTTGCTGGATAATTGCCATGACATGGTTGCTATGAGTTGAATAAATCAGTCAATTCCACGATTTTGGTCTCTTGTGTTCAACATACCATTACCTGTTAACTGTGGTTGGATTGGTGCCGATTGCAGCACTTCGACCAGGGCTCCTCGTTGCTGCTGGGGTCCCTCGTCCTGTTGCCGGCTTGCAGCCACCAGTCACCGTTGCTGGTGGTGGTGCCTTGTACCTGCTGCTCTCCGTCCTGATGGCCATGGCCTTCGTCCCACTGGACGAGCTAAGAGATCTAGTGCATCTGTTCTGAATTTTTCAGGACGGTTCATGTGTCCTGTATTGTTCTATGCTATGTGTTCCCATTTTTGTTTTTGTTGTATGCTATGACATTGTTGCTGCTCTGATCTTTTTTTTTTTCTGAAATAATGAAGATAAGCTTGCTAGTATTTGC]

[+] EMBL AK062875             [TTGTGTGTGGTTCAGGTTCAGGTTCAGGGGCATCTCTCCTCTTTTCTTTCCCTTGCCGCCATTAGCCCAAGCAGCTATCTGGATTCTGGAGAGTTGTTCTCTGGTACTAGTTCTCTAGCGCACGAACAACATCCGCGACGAAGCGCATCCATGGCAGTGGCACCGACGAGAGCGGAGGCACTGTCCCTCTTCCGGTCCCTCCTCCGCACGGCAAGGCAGTTCTCTGACTACAACATCCGCGAGTACACGCGCCGCCGCGCCGCGGACGCCTTCCGTGAGAACCGTGCCCTCGGCGACACGGCTGCCGCGGCGGCAGCATTCGCGGACGGGAAGAAGCAGCTGGAGGTGGCAAAGCGGCAGGCGGTGGTGTACTCTCTGTACGCCCCAAAGGCCAAGAGCATCATGGAGATGAAGTTGCAGTGATCGACGCGAGAGGTTTCGTGCTCTCTTGCTTGCTGTCCTCTTACTCAGGATTTCTTTCTGCTCTGTTTCTAAAGTTATGTGATAGGTTCGAGGAAAATTGGTGCAATCAAAGCTGAGATGTTATCATGTTTGCTGGATAATTGCCATGACATGGTTGCTATGAGTTGAATAAATCAGTCAATTCCACGATTTTGGTCTCTTGTGTTCAACATACCATTACCTGTTAACTGTGGTTGGATTGGTGCCGATTGCAGCACTTCGACCAGGGCTCCTCGTTGCTGCTGGGGTCCCTCGTCCTGTTGCCGGCTTGCAGCCACCAGTCACCGTTGCTGGTGGTGGTGCCTTGTACCTGCTGCTCTCCGTCCTGATGGCCATGGCCTTCGTCCCACTGGACGAGCTAAGAGATCTAGTGCATCTGTTCTGAATTTTTCAGGACGGTTCATGTGTCCTGTATTGTTCTATGCTATGTGTTCCCATTTTTGTTTTTGTTGTATGCTATGACATTGTTGCTGCTCTGATCTTTTTTTTTTTCTGAAATAATGAAGATAAGCTTGCTAGTATTTGC]
[+] EMBL AU223411             [                                                                                                        TACTAGTTCTCTAGCGCACGAACAACATCCGCGACGAAGCGCATCCATGGCAGTGGCACCGACGAGAGCGGAGGCACTGTCCCTCTTCCGGTCCCTCCTCCGCACGGCAAGGCAGTTCTCTGACTACAACATCCGCGAGTACACGCGCCGCCGCGCCGCGGACGCCTTCCGTGAGAACCGTGCCCTCGGCGACACGGCTGCCGCGGCGGCAGCATTCGCGGACGGGAAGAAGCAGCTGGAGGTGGCAAAGCGGCAGGCGGTGGTGTACTCTCTGTACGCCCCAAAGGCCAAGAGCATCATGGAGATGAAGTTGCAGTGATCGACGCGAGAGGTTTCGTGCTCTCTTGCTTGCTGTCCTCTTACTCAGGATTTCTTTCTGCTCTGTTTCTAAAGTTATGTGATAGGTTCGAGGAAAATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU223412             [                                                                                                                                                                                GGCACTGTCCCTCTTCCGGTCCCTCCTCCGCACGGCAAGGCAGTTCTCTGACTACAACATCCGCGAGTACACGCGCCGCCGCGCCGCGGACGCCTTCCGTGAGAACCGTGCCCTCGGCGACACGGCTGCCGCGGCGGCAGCATTCGCGGACGGGAAGAAGCAGCTGGAGGTGGCAAAGCGGCAGGCGGTGGTGTACTCTCTGTACGCCCCAAAGGCCAAGAGCATCATGGAGATGAAGTTGCAGTGATCGACGCGAGAGGTTTCGTGCTCTCTTGCTTGCTGTCCTCTTACTCAGGATTTCTTTCTGCTCTGTTTCTAAAGTTATGTGATAGGTTCGAGGAAAATTGGTGCAATCAAAGCTGAGATGTTATCATGTTTGCTGGATAATTGCCATGACATGGTTGCTATGAGTTGAATAAATCAGTCAATTCCAaaaa                                                                                                                                                                                                                                                                                                                                                                                       ]


>consensus_15866#1 TTGTGTGTGGTTCAGGTTCAGGTTCAGGGGCATCTCTCCTCTTTTCTTTCCCTTGCCGCC ATTAGCCCAAGCAGCTATCTGGATTCTGGAGAGTTGTTCTCTGGTACTAGTTCTCTAGCG CACGAACAACATCCGCGACGAAGCGCATCCATGGCAGTGGCACCGACGAGAGCGGAGGCA CTGTCCCTCTTCCGGTCCCTCCTCCGCACGGCAAGGCAGTTCTCTGACTACAACATCCGC GAGTACACGCGCCGCCGCGCCGCGGACGCCTTCCGTGAGAACCGTGCCCTCGGCGACACG GCTGCCGCGGCGGCAGCATTCGCGGACGGGAAGAAGCAGCTGGAGGTGGCAAAGCGGCAG GCGGTGGTGTACTCTCTGTACGCCCCAAAGGCCAAGAGCATCATGGAGATGAAGTTGCAG TGATCGACGCGAGAGGTTTCGTGCTCTCTTGCTTGCTGTCCTCTTACTCAGGATTTCTTT CTGCTCTGTTTCTAAAGTTATGTGATAGGTTCGAGGAAAATTGGTGCAATCAAAGCTGAG ATGTTATCATGTTTGCTGGATAATTGCCATGACATGGTTGCTATGAGTTGAATAAATCAG TCAATTCCACGATTTTGGTCTCTTGTGTTCAACATACCATTACCTGTTAACTGTGGTTGG ATTGGTGCCGATTGCAGCACTTCGACCAGGGCTCCTCGTTGCTGCTGGGGTCCCTCGTCC TGTTGCCGGCTTGCAGCCACCAGTCACCGTTGCTGGTGGTGGTGCCTTGTACCTGCTGCT CTCCGTCCTGATGGCCATGGCCTTCGTCCCACTGGACGAGCTAAGAGATCTAGTGCATCT GTTCTGAATTTTTCAGGACGGTTCATGTGTCCTGTATTGTTCTATGCTATGTGTTCCCAT TTTTGTTTTTGTTGTATGCTATGACATTGTTGCTGCTCTGATCTTTTTTTTTTTCTGAAA TAATGAAGATAAGCTTGCTAGTATTTGC



consensusID : consensus_15866#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 793
fasta sequence
                              [CCGGNCCCCCCCTAGAGTCGACCCAACGNGTCCGAGAATTTTCCCCGTTTGGTCTCGTTCTCGTTGTCTCCTCCGCTCCTTGCG-CCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGGGCCGGG-TGGCGATCT-CCATCTGGCGAGCAGA-GCAGCGGAGGGGAGGGGATCCTGG-TTCAGGGGCATCTCCTCT-TTTCTTTCCCTTG-CCGCCATTAGCCCAAGCAGCTATC-TGG--ATTC--TGGAGT-AGTTCTCTAGCGCACGAA---CAGCA-TCCGTGA--CGAA---GC----GCATCCATG-G--CGGCA--G-CA-CCGACGAGAG-CGGAGGCGCTGTCCCTCTTCCGGTCCCTCCTCCGCACGGCAAGGCAGTTCTCTGACTACAACATCCGCGAGT-ACGCGCGCCGCCGCGCC----G-CGG-ACGCCTTCCGTGAGAACCGTGCCCTCGGCGATGCGGTTGCCGCGGC-GGCAGTGTTCGCGGACGGGAAGAAGCAGCTGGAGGTGGCAAAGCGGCAGGCGGTGGTGTACTCTCTGTACGCCCCAAAGGCCAAGAGCATCATGGAGATGAAGCTGCAGTGATCGGTGCAACTAAAACTGAGATGTTATTATGTTTGCTAGATAATTTCCATGACATGGTTGCTATGAGTTCAATAAACTAGTCAATTCCACAAAAAAAAAAACTTGTGTTCAACATGCCATTACCTGTTAGGCAGGGCACCTGCCTTTTCAACATGCCATTAACTGTAAGCCAATCTGTTTGGTGGCTTTGCAAAAAAAAAAAAAAAAACACAATCATGCCGTTACGTAGCGTATC]

[+] EMBL C97011               [CCGGNCCCCCCCTAGAGTCGACCCAACGNGTCCGAGAATTTTCCCGTTTTGGTCTCGTTCTCGTTGTCTCCTCCGCTCTTTGCGCCCGCNNCCAAGACGATTCGCGGCTGAACAGGGGAGGGCCGGG TGGCGATCT CCATCTGGCGAGCAGA GCAGCGGAGGGGAGGGNATCCTGG TTCAGGGGCATCTCCTCT TTTCTTNCCCTTGCCCGCCATTAGCCCAAGCAGCTATC TGG  ATTC  TGGAGT AGTTCTCTAGCGCACGAA   CAGCA TCCGTGA  CGAA   GC    GCATCCATG G  CGGCA  G CA CCGACGAGAG CGGAGGCGCTGTCCCTCTTCCGGTCCCTCCTCCGCACGGCAAGGCAGTTCTCTGACTACAACATCCGCGAGTAACGCGCGCCGCCGCGCC    G CGG ACGCCTTCCGTGAGAACCGTGCCCTCGGCGATGCGGTTGCCGCGGC GGCAGTGTTCGCGGACGGGAAGAAGCAGCTGGAGGTGGCAAAGCGGCAGGCGGTGGTGTACTCTCTGTACGCCCCAAAGGCCAAGAGCATCATGGAGATGAAGCTGCAGTGATCGGTGCAACTAAAACTGAGATGTTATTATGTTTGCTAGATAATTTCCATGACATGGTTGCTATGAGTTCAATAAACTAGTCAATTCCACAAAAA                                                                                                                                            ]
[+] EMBL OS1321644            [                                aaAGAAATCT CCCGTTTGGTCTCGTTCTCGTTGTCTCCTCCGCTCCTTGCG CTGNCGNCAAGACGAGTCGCGGCTGAACAGGGGAGGGCCGGG TGGCGATCT CCATCTGGCGAGCAGA GCAGCGGAGGGGAGGGGATCCTGG TTCAGGGGCATCTCCTCT TTTCTTTCCCTTG CCGCCATTAGCCCAAGCAGCTATC TGG  ATTC  TGGAGT AGTTCTCTAGCGCACGAA   CAGCA TCCGTGA  CGAA   GC    GCATCCATG G  CGGCA    NA CCGACGAGAG CGGAGGCGCTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL C26931               [                                            CCGTTTGGTCTCGTTCTCGTTGTCTCCTCCGCTCCTTGCG CCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGGGCCGGG TGGCGATCT CCATCTGGCGAGCAGA GCAGCGGAGGGGAGGGGATCCTGG TTCAGGGGCATCTCCTCT TTTCTTTCCCTTG CCGCCATTAGCCCAAGCAGCTATC TGG  ATTC  TGGAGT AGTTCTCTAGCGCACGAA   CAGCA TCCGTGA  CGAA   GC    GCATCCATG G  CGGCA  N AC CCGACGAGAG CGGAGGCGCTGTCCCTCTTCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU057242             [                                             CGTTTGGTCTCGTTCTCGTTGTCTCCTCCGCTCCTTGCG CCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGGGCCGGG TGGCGATCT CCATCTGGCGAGCAGA GCAGCGGAGGGGAGGGGATCCTGG TTCAGGGGCATCTCCTCT TTTCTTTCCCTTG CCGCCATTAGCCCAAGCAGCTATC TGG  ATTC  TGGAGT AGTTCTCTAGCGCACGAA   CAGCA TCCGTGA  CGAA   GC    GCATCCATG G  CGGCA  G CA CCGACGAGAG CGGAGGCGCTGTCCCTCTTCCGGTCCCTCCTCCGCACGGCAAGGCAGTTCTCTGACTACAACATCCGCGAGT ACGCGCGCCGCCGCGCC    G CGGAACGCCTTCCGTGAGAACCGTGCCCTCGGCGATGCGGTTGCCGCGGCGGGCAGTGTTCGCGGACGGGAAGAAGCAGCTGGAGGTGGCAA                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB665072             [                                                                                                    GTCGCGGCTGAACAGGGGAGGGCCGGG TGGCGATCT CCATCTGGCGAGCAGA GCAGCGGAGGGGAGGGGATCCTGG TTCAGGGGCATCTCCTCT TTTCTTTCCCTTG CCGCCATTAGCCCAAGCAGCTATC TGG  ATTC  TGGAGT AGTTCTCTAGCGCACGAA   CAGCA TCCGTGA  CGAA   GC    GCATCCATG G  CGGCA  G CA CCGACGAGAG CGGAGGCGCTGTCCCTCTTCCGGTCCCTCCTCCGCACGGCAAGGCAGTTCTCTGACTACAACATCCGCGAGT ACGCGCGCCGCCGCGCC    G CGG ACGCCTTCCGTGAGAACCGTGCCCTCGGCGATGCGGTTGCCGCGGC GGCAGTGTTCGCGGACGGGAAGAAGCAGCTGGAGGTGGCAAAGCGGCAGGCGGTGGTGTACTCTCTGTACGCCCCAAAGGCCAAGAGCATCATGGAGATGAAGCTGCAGTGATCGGTGCAACTAAAACTGAGATGTTATTATGTTTGCTAGATAATTTCCATGACATGGTTGCTATGAGTTCAATAAACTAG                                                                                                                                                           ]
[+] EMBL BI799789             [                                                                                                                 AGGGGAGGCCCGGG TGGCGATCT CCATCTGGCGAGCAGA GCAGCGGAGGGGAGGGGATCCTGG TTCAGGGGCATCTCCTCTGTTTCTTTCCCTTG CCGCCATTAGCCCAAGCAGCTATC TGG  ATTC  TGGAGT AGTTCTCTAGCGCACGAA   CAGCA TCCGTGA  CGAA   GC    GCATCCATG G  CGGCA  G CA CCGACGAGAG CGGAGGCGCTGTCCCTCTTCCGGTCCCTCCTCCGCACGGCAAGGCAGTTCTCTGACTACAACATCCGCGAGT ACGCGCGCCGCCGCGCC    G CGG ACGCCTTCCGTGAGAACCGTGCCCTCGGCGATGCGGCTGCCGCGGC GGCAGTGTTCGCGGACGGGAAGAAGCAGCTGGAGGTGGCAAAGCGGCAGGCGGTGGTGTACTCTCTGTACGCCCCAAAGGCCAAGAGCATCATGGAGATGAAGCTGCAGTGATCGGTGCAACTAAAACTGAGATGTTATTATGTTTGCTAGATAATTTCCATGACATGGTTGCTATGAGTTCAATAAACTAGTCAATTCCACAAAAA                                                                                                                                            ]
[+] EMBL AU031274             [                                                                                                                 gGGGAAGNCCCGGGTTGGCGATCTCCCNTTTGGCGAGCAGATCCACCGGAGGGGAGGGGATCCTGGTTTCAGGGGCATCTCCTCT TTTCTTTCCCTTG CCGCCATTAGCCCAAGCAGCTATCTTGG  ATTC  TGGAGT AGTTCTCTAGCGCACGAA   CAGCA TCCGTGA  CGAA   GC    GCATCCATG G  CGGCA  G CA CCGACGAGAG CGGAGGCGCTGTCCCTCTTCCGGTCCCTCCTCCGCACGGCAAGGCAGTTCTCTGACTACAACATCCGCGAGT ACGCGCGCCGCCGCGCC    G CGG ACGCCTTCCGTGAGAACCGTGCCCTCGGCGATGCGGTTGCCGCGGC GGCAGTGTTCGCGGACGGGAAGAAGCAGCTGGAGGTGGCAAAGCGGCAGGCGGTGGTGTACTCTCTGTACGCCCCAAAGGCCAAGAGCATCATGGAGATGAAGCTGCAGTGATCGGTGCAACTAAAACTGAGATGTTATTATGTTTGCTAGATAATTTCCATGACATGGTTGCTATGAGTTCAATAAACTAGTCAATTCCACAAAAA                                                                                                                                            ]
[+] EMBL BQ906853             [                                                                                                                                                                                 GG TTCAGGGGCATCTCCTCT TTTCTTTCCCTTG CCGCCATTAGCCCAAGCAGCTATC TGGGAATTCTTTGGAGTAAGTTCTCTAGCGCACGAAACCCAGCATTCCGTGACCCGAAAGGGCCCTGGCATCCATGTGCCCGGCATTGCCACCCGACGAGAGNCGGAGGCGCTGTCCCTCTTCCGGTCCCTCCTCCGCACGGCAAGGCAGTTCTCTGACTACAACATCCGCGAGT ACGCGCGCCGCCGCGCCCCCGGCCGG ACGCCTTCCGTGAGAACCGTGCCCTCGGCGATGCGGCTGCCGCGGC GGCAGTGTTCGCGGACGGGAAGAAGCAGCTGGAGGTGGCAAAGCGGCAGGCGGTGGTGTACTCTCTGTACGCCCC AAGGCCAAGAGCATCATGGAGATGAAGCTGCAGTGATCGGTGCAACTAAAACTGAGATGTTATTATGTTTGCTAGATAATTTCCATGACATGGTTGCTATGAGTTCAATAAACTAGTCAATTCCACAAAAAAAAAAA                                                                                                                                      ]
[-] EMBL CF291239             [                                                                                                                                                                                                                 TTG CCGCCATTAGCCCAAGCAGCTATC TGG  ATTC  TGGAGT AGTTCTCTAGCGCACGAA   CAGCA TCCGTGA  CGAA   GC    GCATCCATG G  CGGCA  G CA CCGACGAGAG CGGAGGCGCTGTCCTTCTTCCGGTCCCTCCTCCGCACGGCAAGGCAGTTCTCTGACTACAACATCCGCGAGT ACGCGCGCCGCCGCGCC    G CGG ACGCCTTCCGTGAGAACCGTGCCCTCGGCGATGCGGTTGCCGCGGC GGCAGTGTTCGCGGACGGGAAGAAGCAGCTGGAGGTGGCAAAGCGGCAGGCGGTGGTGTACTCTCTGTACGCCCCAAAGGCCAAGAGCATCATGGAGATGAAGCTGCAGTGATCGGTGCAACTAAAACTGAGATGTTATTATGTTTGCTAGATAATTTCCATGACATGGTTGCTATGAGTTCAATAAACTAGTCAATTCCACAATTCCGGTCTCTTGTGTTCAACATGCCATTACCTGTTAGGCAGGGCACCTGCCTTTTCAACATGCCATTAACTGTAAGCCAATCTGTTTGGTGGCTTTGCAAAAAAAAAAAAAAAAACACAATCATGCCGTTACGTAGCGTATC]
[+] EMBL AU057243             [                                                                                                                                                                                                                                       GCTATC TGG  ATTC  TGGAGT AGTTCTCTAGCGCACGAA   CAGCA TCCGTGA  CGAA   GC    GCATCCATG G  CGGCA  G CA CCGACGAGAG CGGAGGCGCTGTCCCTCTTCCGGTCCCTCCTCCGCACGGCAAGGCAGTTCTCTGACTACAACATCCGCGAGT ACGCGCGCCGCCGCGCC    G CGG ACGCCTTCCGTGAGAACCGTGCCCTCGGCGATGCGGTTGCCGCGGC GGCAGTGTTCGCGGACGGGAAGAAGCAGCTGGAGGTGGCAAAGCGGCAGGCGGTGGTGTACTCTCTGTACGCCCCAAAGGCCAAGAGCATCATGGAGATGAAGCTGCAGTGATCGGTGCAACTAAAACTGAGATGTTATTATGTTTGCTAGATAATTTCCATGACATGGTTGCTATGAGTTCAATAAACTAGTCAATTCCACAAAAA                                                                                                                                            ]


>consensus_15866#2 CCGGNCCCCCCCTAGAGTCGACCCAACGNGTCCGAGAATTTTCCCCGTTTGGTCTCGTTC TCGTTGTCTCCTCCGCTCCTTGCGCCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGG GCCGGGTGGCGATCTCCATCTGGCGAGCAGAGCAGCGGAGGGGAGGGGATCCTGGTTCAG GGGCATCTCCTCTTTTCTTTCCCTTGCCGCCATTAGCCCAAGCAGCTATCTGGATTCTGG AGTAGTTCTCTAGCGCACGAACAGCATCCGTGACGAAGCGCATCCATGGCGGCAGCACCG ACGAGAGCGGAGGCGCTGTCCCTCTTCCGGTCCCTCCTCCGCACGGCAAGGCAGTTCTCT GACTACAACATCCGCGAGTACGCGCGCCGCCGCGCCGCGGACGCCTTCCGTGAGAACCGT GCCCTCGGCGATGCGGTTGCCGCGGCGGCAGTGTTCGCGGACGGGAAGAAGCAGCTGGAG GTGGCAAAGCGGCAGGCGGTGGTGTACTCTCTGTACGCCCCAAAGGCCAAGAGCATCATG GAGATGAAGCTGCAGTGATCGGTGCAACTAAAACTGAGATGTTATTATGTTTGCTAGATA ATTTCCATGACATGGTTGCTATGAGTTCAATAAACTAGTCAATTCCACAAAAAAAAAAAC TTGTGTTCAACATGCCATTACCTGTTAGGCAGGGCACCTGCCTTTTCAACATGCCATTAA CTGTAAGCCAATCTGTTTGGTGGCTTTGCAAAAAAAAAAAAAAAAACACAATCATGCCGT TACGTAGCGTATC



consensusID : consensus_15866#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 669
fasta sequence
                              [TGACTGGACTGAAGGAGTAGAAAGTTGTCTCCTCCGCTCCTTGCGCCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGGGCCGGGTGGCGATCTCCATCTGGCGAGCAGAGCAGCGGAGGGGAGGGGATCCTGGTTCAGGGGCATCTCCTCTTTTCTTTCCCTTGCCGCCATTAGCCCAAGCAGCTATCTGGATTCTGGAGTAGTTCTCTAGCGCACGAACAGCATCCGTGACGAAGCGCATCCATGGCGGCAGCACCGACGAGAGCGGAGGCGCTGTCCCTCTTCCGGTCCCTCCTCCGCACGGCAAGGCAGTTCTCTGACTACAACATCCGCGAGTACGCGCGCCGCCGCGCCGC-GGACGCC-TTCCGTGAGAACCGT-GCCC-TCGGCGATGCGGTTGCCGCGGCGGC-AGTG-TTCGC-GGACGGGAAGAAGCAGCTGGAGGTGGCAAAGCGGCAGGCGNGTGGTGTACTCTCTGTACGCCCCAAAGGCCAAGAGCATCATGGAGATGAAGCTGCAGTGATCGGTGCAACTAAAACTGAGATGTTATTATGTTTGCTAGATAATTTCCATGACATGGTTGCTATGAGTTCAATAAACTAGTCAATTCCACAATT-CCGGTCTCTTGT-GTTCAACATGCCATTACCTGTTAGGCAGGGCACTGCCTTTTCA]

[+] EMBL CF291238             [TGACTGGACTGAAGGAGTAGAAAGTTGTCTCCTCCGCTCCTTGCGCCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGGGCCGGGTGGCGATCTCCATCTGGCGAGCAGAGCAGCGGAGGGGAGGGGATCCTGGTTCAGGGGCATCTCCTCTTTTCTTTCCCTTGCCGCCATTAGCCCAAGCAGCTATCTGGATTCTGGAGTAGTTCTCTAGCGCACGAACAGCATCCGTGACGAAGCGCATCCATGGCGGCAGCACCGACGAGAGCGGAGGCGCTGTCCCTCTTCCGGTCCCTCCTCCGCACGGCAAGGCAGTTCTCTGACTACAACATCCGCGAGTACGCGCGCCGCCGCGCCGC GGACGCC TTCCGTGAGAACCGT GCCC TCGGCGATGCGGTTGCCGCGGCGGC AGTG TTCGC GGACGGGAAGAAGCAGCTGGAGGTGGCAAAGCGGCAGGCGNGTGGTGTACTCTCTGTACGCCCCAAAGGCCAAGAGCATCATGGAGATGAAGCTGCAGTGATCGGTGCAACTAAAACTGAGATGTTATTATGTTTGCTAGATAATTTCCATGACATGGTTGCTATGAGTTCAATAAACTAGTCAATTCCACAATT CCGGTCTCTTGT GTTCAACATG                                 ]
[+] EMBL CA754717             [                     tcGTTGTCTCCTCCGCTCCTTGCGCCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGGGCCGGGTGGCGATCTCCATCTGGCGAGCAGAGCAGCGGAGGGGAGGGGATCCTGGTTCAGGGGCATCTCCTCTTTTCTTTCCCTTGCCGCCATTAGCCCAAGCAGCTATCTGGATTCTGGAGTAGTTCTCTAGCGCACGAACAGCATCCGTGACGAAGCGCATCCATGGCGGCAGCACCGACGAGAGCGGAGGCGCTGTCCCTCTTCCGGTCCCTCCTCCGCACGGCAAGGCAGTTCTCTGACTACAACATCCGCGAGTACGCGCGCCGCCGCGCCGC GGACGCC TTCCGTGAGAACTGT GCCC TCGGCGATGCGGTTGCCGCGGCGGC AGTG TTCGC GGACGGGAAGAAGCAGCTGGAGGTGGCAAAGCGGCAGGCG GTGGTGTACTCTCTGTACGCCCCAAAGGCCAAGAGCATCATGGAGATGAAGCTGCAGTGATCGGTGCAACTAAAACTGAGATGTTATTATGTTTGCTAGAT ATTTCCATGACATGGTTGCTATGAGTTCAATAAACTAGTCAATTCCCCAATTCCCGGTCTCTTGTGGGTC ACATGCCATTACCTGTTAGGCAGGGCACTGCCTTTTCA]
[+] EMBL AU031275             [                         TGTCTCCTCCGCTCCTTGCGCCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGGGCCGGGTGGCGATCTCCATCTGGCGAGCAGAGCAGCGGAGGGGAGGGGATCCTGGTTCAGGGGCATCTCCTCTTTTCTTTCCCTTGCCGCCATTAGCCCAAGCAGCTATCTGGATTCTGGAGTAGTTCTCTAGCGCACGAACAGCATCCGTGACGAAGCGCATCCATGGCGGCAGCACCGACGAGAGCGGANGCGCTGTCCCTCTTCCGGTCCCTCCTCCGCACGGCAAGGCAGTTCTCTGACTACAACATCCGCGAGTANGCGCGCCGCCGCGCCGCGGGACGCCTTTCCGTGAGAACCGTGGCCCTTCGGCGATGCGGTTGCCGCGGCGGCAAGTGTTTCGCGGGACGGGAAGAAGCAGCTGG                                                                                                                                                                                                                                        ]


>consensus_15866#3 TGACTGGACTGAAGGAGTAGAAAGTTGTCTCCTCCGCTCCTTGCGCCGCCGCCAAGACGA GTCGCGGCTGAACAGGGGAGGGCCGGGTGGCGATCTCCATCTGGCGAGCAGAGCAGCGGA GGGGAGGGGATCCTGGTTCAGGGGCATCTCCTCTTTTCTTTCCCTTGCCGCCATTAGCCC AAGCAGCTATCTGGATTCTGGAGTAGTTCTCTAGCGCACGAACAGCATCCGTGACGAAGC GCATCCATGGCGGCAGCACCGACGAGAGCGGAGGCGCTGTCCCTCTTCCGGTCCCTCCTC CGCACGGCAAGGCAGTTCTCTGACTACAACATCCGCGAGTACGCGCGCCGCCGCGCCGCG GACGCCTTCCGTGAGAACCGTGCCCTCGGCGATGCGGTTGCCGCGGCGGCAGTGTTCGCG GACGGGAAGAAGCAGCTGGAGGTGGCAAAGCGGCAGGCGNGTGGTGTACTCTCTGTACGC CCCAAAGGCCAAGAGCATCATGGAGATGAAGCTGCAGTGATCGGTGCAACTAAAACTGAG ATGTTATTATGTTTGCTAGATAATTTCCATGACATGGTTGCTATGAGTTCAATAAACTAG TCAATTCCACAATTCCGGTCTCTTGTGTTCAACATGCCATTACCTGTTAGGCAGGGCACT GCCTTTTCA



consensusID : consensus_15866#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 587
fasta sequence
                              [AAAAGAAATCTGCCGTCTCGCTCTCGTTGTCTCCTCCGCTCCTTGCGCCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGCGCCGGGCGGCGAGCTCCATCTGGCGAGCAGAGCAGAGCAGCGGAGGGGAGGGGATCCTGGAATCAGGACATAGATGGATCCAGAGGTGAAGGACTCAAGGCCATCGAGGTCTCCCGGCGAACCAAATCTTTTCCTGCAATGGGGCAGCCGGAAACGACTCCGCTGTGTCAAGACGAGGGACGACGGCTCGCCATCACCTGCGCGGACCGATGTTCTTAGGCGCACCATACCACGAGTGAATCGCCCGCTTGGCGGGTGATGTTGCCCCGTTTCGTTCGCCGCGGCGCCCGAGCACGCTGAACCGAAGGTAGCTTCAGTATGCCATAGAACACACTCGCATCGACTGGAAATATCGAGCAATTCTTCCTAATATAAGGTAACTGATTGTCTGAGAGCAGGAAAACCGAGCCATTTGTGAGCGATAACAGGCACTCCATGTCACTCTCGCCAGAGAAGGATCGATATTACTCCACTAGGGGTTCTCCATTCCCATTCGAGGGAAAT]

[+] EMBL CF315400             [AAAAGAAATCTGCCGTCTCGCTCTCGTTGTCTCCTCCGCTCCTTGCGCCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGCGCCGGGCGGCGAGCTCCATCTGGCGAGCAGAGCAGAGCAGCGGAGGGGAGGGGATCCTGGAATCAGGACATAGATGGATCCAGAGGTGAAGGACTCAAGGCCATCGAGGTCTCCCGGCGAACCAAATCTTTTCCTGCAATGGGGCAGCCGGAAACGACTCCGCTGTGTCAAGACGAGGGACGACGGCTCGCCATCACCTGCGCGGACCGATGTTCTTAGGCGCACCATACCACGAGTGAATCGCCCGCTTGGCGGGTGATGTTGCCCCGTTTCGTTCGCCGCGGCGCCCGAGCACGCTGAACCGAAGGTAGCTTCAGTATGCCATAGAACACACTCGCATCGACTGGAAATATCGAGCAATTCTTCCTAATATAAGGTAACTGATTGTCTGAGAGCAGGAAAACCGAGCCATTTGTGAGCGATAACAGGCACTCCATGTCACTCTCGCCAGAGAAGGATCGATATTACTCCACTAGGGGTTCTCCATTCCCATTCGAGGGAAAT]


>consensus_15866#4 AAAAGAAATCTGCCGTCTCGCTCTCGTTGTCTCCTCCGCTCCTTGCGCCGCCGCCAAGAC GAGTCGCGGCTGAACAGGGGAGCGCCGGGCGGCGAGCTCCATCTGGCGAGCAGAGCAGAG CAGCGGAGGGGAGGGGATCCTGGAATCAGGACATAGATGGATCCAGAGGTGAAGGACTCA AGGCCATCGAGGTCTCCCGGCGAACCAAATCTTTTCCTGCAATGGGGCAGCCGGAAACGA CTCCGCTGTGTCAAGACGAGGGACGACGGCTCGCCATCACCTGCGCGGACCGATGTTCTT AGGCGCACCATACCACGAGTGAATCGCCCGCTTGGCGGGTGATGTTGCCCCGTTTCGTTC GCCGCGGCGCCCGAGCACGCTGAACCGAAGGTAGCTTCAGTATGCCATAGAACACACTCG CATCGACTGGAAATATCGAGCAATTCTTCCTAATATAAGGTAACTGATTGTCTGAGAGCA GGAAAACCGAGCCATTTGTGAGCGATAACAGGCACTCCATGTCACTCTCGCCAGAGAAGG ATCGATATTACTCCACTAGGGGTTCTCCATTCCCATTCGAGGGAAAT



consensusID : consensus_15866#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 391
fasta sequence
                              [TTTTTTTATTCTAAAAAGCAAATACTAGCAAGCTTATCTTCATTATTTCAGAAAAAAAAAAAGATCAGAGCAGCAACAATGTCATAGCATACTTTAAAAACAAAAATGGGAACACATAGCATAGAACAATACAGGACACATTTTTTTTTCCTGAAAAATTCAGAACATATGCACTAGATCTCTTAGTCCGTCATTGGGACGAAGGCCATGGCCATCAGGACGGAGAGCAGCAGGTACAAGGCACCACCACCAGCAACGGTGACTGGTGGCTGCAAGCCGGCAACAGGACGAGGGACCCCAGCAGCAACGAGGAGCCCTGGTCGAAGTGCTCTCGCGTCGATCACTGCAACTTCATCTCCATGATGCTCTTGGCCTTTGGGGCGTACAGAGA]

[+] EMBL CF279113             [TTTTTTTATTCTAAAAAGCAAATACTAGCAAGCTTATCTTCATTATTTCAGAAAAAAAAAAAGATCAGAGCAGCAACAATGTCATAGCATACTTTAAAAACAAAAATGGGAACACATAGCATAGAACAATACAGGACACATTTTTTTTTCCTGAAAAATTCAGAACATATGCACTAGATCTCTTAGTCCGTCATTGGGACGAAGGCCATGGCCATCAGGACGGAGAGCAGCAGGTACAAGGCACCACCACCAGCAACGGTGACTGGTGGCTGCAAGCCGGCAACAGGACGAGGGACCCCAGCAGCAACGAGGAGCCCTGGTCGAAGTGCTCTCGCGTCGATCACTGCAACTTCATCTCCATGATGCTCTTGGCCTTTGGGGCGTACAGAGA]


>consensus_15866#5 TTTTTTTATTCTAAAAAGCAAATACTAGCAAGCTTATCTTCATTATTTCAGAAAAAAAAA AAGATCAGAGCAGCAACAATGTCATAGCATACTTTAAAAACAAAAATGGGAACACATAGC ATAGAACAATACAGGACACATTTTTTTTTCCTGAAAAATTCAGAACATATGCACTAGATC TCTTAGTCCGTCATTGGGACGAAGGCCATGGCCATCAGGACGGAGAGCAGCAGGTACAAG GCACCACCACCAGCAACGGTGACTGGTGGCTGCAAGCCGGCAACAGGACGAGGGACCCCA GCAGCAACGAGGAGCCCTGGTCGAAGTGCTCTCGCGTCGATCACTGCAACTTCATCTCCA TGATGCTCTTGGCCTTTGGGGCGTACAGAGA



consensusID : consensus_15866#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 331
fasta sequence
                              [GCGACGCGTGGCGACGCGTGGGCGGCAAGGCAGTTCTCTGACTACAACATCCGCGAGTACGCGCCCCCCGCGCCGCGGACCCCTTCCGTGAGAACCGTGCCCTCGGCGATGCGGCTGCCGCGGCGGCAGTGTTCGCGGACGGGAAGAAGCAGCTGGAGGTGGCCAAGCGGCAGGCGGTGGTGTACTCTCTGTACGCCCCAAGGCCAAGAGCATCATGGAGATGAAGCTGCAGTGATCGGTGCAACTAAAACTGAGATGTTATTATGTTTGCTAGATAATTTCCATGACATGGTTGCTATGAGTTCAATAAACTAGTCAATTCCACCAAAAA]

[+] EMBL BI808245             [GCGACGCGTGGCGACGCGTGGGCGGCAAGGCAGTTCTCTGACTACAACATCCGCGAGTACGCGCCCCCCGCGCCGCGGACCCCTTCCGTGAGAACCGTGCCCTCGGCGATGCGGCTGCCGCGGCGGCAGTGTTCGCGGACGGGAAGAAGCAGCTGGAGGTGGCCAAGCGGCAGGCGGTGGTGTACTCTCTGTACGCCCCAAGGCCAAGAGCATCATGGAGATGAAGCTGCAGTGATCGGTGCAACTAAAACTGAGATGTTATTATGTTTGCTAGATAATTTCCATGACATGGTTGCTATGAGTTCAATAAACTAGTCAATTCCACCAAAAA]


>consensus_15866#6 GCGACGCGTGGCGACGCGTGGGCGGCAAGGCAGTTCTCTGACTACAACATCCGCGAGTAC GCGCCCCCCGCGCCGCGGACCCCTTCCGTGAGAACCGTGCCCTCGGCGATGCGGCTGCCG CGGCGGCAGTGTTCGCGGACGGGAAGAAGCAGCTGGAGGTGGCCAAGCGGCAGGCGGTGG TGTACTCTCTGTACGCCCCAAGGCCAAGAGCATCATGGAGATGAAGCTGCAGTGATCGGT GCAACTAAAACTGAGATGTTATTATGTTTGCTAGATAATTTCCATGACATGGTTGCTATG AGTTCAATAAACTAGTCAATTCCACCAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15866#0      ---------------------------------------AAGAAATCTGCCGTCTCGCTC 21
consensus_15866#4      -------------------------------------AAAAGAAATCTGCCGTCTCGCTC 23
consensus_15866#2      CCGGNCCCCCCCTAGAGTCGACCCAACGNGTCCGAGAATTTTCCCCGTTTGGTCTCGTTC 60
consensus_15866#3      ----------------------------------------TGACTGGACTGAAGGAGTAG 20
consensus_15866#1      ------------------------------------------------------------
consensus_15866#6      ------------------------------------------------------------
consensus_15866#5      -------------------------------------------TTTTTTTATTCTAAAAA 17
                                                                                   

consensus_15866#0      TC-GTTGTCTCCTCCGCTCCTTGCGCCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAG 80
consensus_15866#4      TC-GTTGTCTCCTCCGCTCCTTGCGCCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAG 82
consensus_15866#2      TC-GTTGTCTCCTCCGCTCCTTGCGCCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAG 119
consensus_15866#3      AAAGTTGTCTCCTCCGCTCCTTGCGCCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAG 80
consensus_15866#1      ------------------------------------------------------------
consensus_15866#6      ------------------------------------------------------------
consensus_15866#5      GCAAATACTAGCAAGCTTATCTTCATTATTTCAGAAAAAAAAAAAGATCAGAGCAGCAAC 77
                                                                                   

consensus_15866#0      CGCCGGGCGGCGAGCTCCATCTGGCGAGCAGAGCAGAGCAGCGGAGGGGAGGGGATCCTG 140
consensus_15866#4      CGCCGGGCGGCGAGCTCCATCTGGCGAGCAGAGCAGAGCAGCGGAGGGGAGGGGATCCTG 142
consensus_15866#2      GGCCGGGTGGCGATCTCCATCTGGCGAGCAGAGCAGCGGAGGGGAGGGGATCCTGGTTCA 179
consensus_15866#3      GGCCGGGTGGCGATCTCCATCTGGCGAGCAGAGCAGCGGAGGGGAGGGGATCCTGGTTCA 140
consensus_15866#1      ----------------------------------TTGTGTGTGGTTCAGGTTCAGGTTCA 26
consensus_15866#6      ------------------------------------------------------------
consensus_15866#5      AATGTCATAGCATACTTTAAA-AACAAAAATGGGAACACATAGCATAGAA--CAATACAG 134
                                                                                   

consensus_15866#0      GAATCAGGAC-----ATAGATGGATCCAGAGGTGAAGGACTCAAG--GCCATCGAGGTCT 193
consensus_15866#4      GAATCAGGAC-----ATAGATGGATCCAGAGGTGAAGGACTCAAG--GCCATCGAGGTCT 195
consensus_15866#2      GGGGCATCTC--CTCTTTTCTTTCCCTTGCCGCCATTAGCCCAAGCAGCTATCTGGATTC 237
consensus_15866#3      GGGGCATCTC--CTCTTTTCTTTCCCTTGCCGCCATTAGCCCAAGCAGCTATCTGGATTC 198
consensus_15866#1      GGGGCATCTCTCCTCTTTTCTTTCCCTTGCCGCCATTAGCCCAAGCAGCTATCTGGATTC 86
consensus_15866#6      ------------------------------------------------------------
consensus_15866#5      GACACATTTTTTTTTCCTGAAAAATTCAGAACATATGCACTAGATCTCTTAGTCCGTCAT 194
                                                                                   

consensus_15866#0      CCCGGCGA-----------ACCAAATCTTTTCCTGCAATGGGGCAGCCG----GAAACGA 238
consensus_15866#4      CCCGGCGA-----------ACCAAATCTTTTCCTGCAATGGGGCAGCCG----GAAACGA 240
consensus_15866#2      TGGAG----------------TAGTTCTCTAGCGCACGAACAGCATCCGTGACGAAGCGC 281
consensus_15866#3      TGGAG----------------TAGTTCTCTAGCGCACGAACAGCATCCGTGACGAAGCGC 242
consensus_15866#1      TGGAGAGTTGTTCTCTGGTACTAGTTCTCTAGCGCACGAACAACATCCGCGACGAAGCGC 146
consensus_15866#6      ------------------------------------------------------------
consensus_15866#5      TGGGACGAA----------GGCCATGGCCATCAGGACGGAGAGCAGCAGGTACAAGGCAC 244
                                                                                   

consensus_15866#0      CTCCGCTGTGTCAAGACGAGGGACGACGGCT-CGCCATCACCTGCGCGGACCGATGTTCT 297
consensus_15866#4      CTCCGCTGTGTCAAGACGAGGGACGACGGCT-CGCCATCACCTGCGCGGACCGATGTTCT 299
consensus_15866#2      ATCCATGGCGGCAGCACCGACGAGAGCGGAGGCGCTGTCCCTCTTCCGGTCCCTCCTCCG 341
consensus_15866#3      ATCCATGGCGGCAGCACCGACGAGAGCGGAGGCGCTGTCCCTCTTCCGGTCCCTCCTCCG 302
consensus_15866#1      ATCCATGGCAGTGGCACCGACGAGAGCGGAGGCACTGTCCCTCTTCCGGTCCCTCCTCCG 206
consensus_15866#6      --------------------------------------GCGACGCGTGGCGACGCGT--G 20
consensus_15866#5      CACCACCA-GCAACGGTGACTGGTGGCTGCA-AGCCGGCAACAGGACGA---GGGACCCC 299
                                                                      *            

consensus_15866#0      TA-GGCGCACCA-TACCACGAGTGAATCGCCCGCTTG-GCGG-TGATGTTGCCCCGTTT- 352
consensus_15866#4      TA-GGCGCACCA-TACCACGAGTGAATCGCCCGCTTG-GCGGGTGATGTTGCCCCGTTT- 355
consensus_15866#2      CACGGCAAGGCAGTTCTCTGACTACAACATCCGCGAGTACGCGCGCCGCCGCGCCGCGGA 401
consensus_15866#3      CACGGCAAGGCAGTTCTCTGACTACAACATCCGCGAGTACGCGCGCCGCCGCGCCGCGGA 362
consensus_15866#1      CACGGCAAGGCAGTTCTCTGACTACAACATCCGCGAGTACACGCGCCGCCGCGCCGCGGA 266
consensus_15866#6      GGCGGCAAGGCAGTTCTCTGACTACAACATCCGCGAGTACGCGCCCC-CCGCGCCGCGGA 79
consensus_15866#5      AGCAGCAACGAGGAGCCCTGGTCGAAGTGCTCTCGCG-TCGATCACTGCAACTTCAT--- 355
                           **         *   *     *     * *  *  *           *  *     

consensus_15866#0      CGTTCGCCGCGGCGCCCGAGCACGCTGAACCGAAGGAAAACCGAGCCATTTGTGAGCGAT 412
consensus_15866#4      CGTTCGCCGCGGCGCCCGAGCACGCTGAACCGAAGGTAG-------CTTCAGTATGCCAT 408
consensus_15866#2      CGCCTTCCGTGAGAACCGTGCCCTCGGCGATGCGGTTGC--CGCGGCGGCAGTGTTCGCG 459
consensus_15866#3      CGCCTTCCGTGAGAACCGTGCCCTCGGCGATGCGGTTGC--CGCGGCGGCAGTGTTCGCG 420
consensus_15866#1      CGCCTTCCGTGAGAACCGTGCCCTCGGCGACACGGCTGC--CGCGGCGGCAGCATTCGCG 324
consensus_15866#6      CCCCTTCCGTGAGAACCGTGCCCTCGGCGATGCGGCTGC--CGCGGCGGCAGTGTTCGCG 137
consensus_15866#5      ----CTCCATGATGCTCTTGGCCTTTGGGGCGTACAGAGA-------------------- 391
                             **  *     *  *  *   *                                 

consensus_15866#0      AACAGGCACTCCATGTCACTCTCGCCAGAGAAGGATCGATATTACTCCACTAGGGGTTCT 472
consensus_15866#4      AGAACACACTCGCATCGACT--------GGAAATATCGA-------------GCAATTCT 447
consensus_15866#2      GACGGGAA---GAAGCAGCTGGAGGTGGCAAAGCGGCAGG-------CGG-TGGTGTACT 508
consensus_15866#3      GACGGGAA---GAAGCAGCTGGAGGTGGCAAAGCGGCAGG-------CGNGTGGTGTACT 470
consensus_15866#1      GACGGGAA---GAAGCAGCTGGAGGTGGCAAAGCGGCAGG-------CGG-TGGTGTACT 373
consensus_15866#6      GACGGGAA---GAAGCAGCTGGAGGTGGCCAAGCGGCAGG-------CGG-TGGTGTACT 186
consensus_15866#5      ------------------------------------------------------------
                                                                                   

consensus_15866#0      CCATTCCCATTCGAGGGAAATGGGTTTGATTTTGGTGGTGGAATGGAAGAAAAGG--GAA 530
consensus_15866#4      ----TCCTAATATAAGGTAACTGATTGTCTGAGAGCAGGAAAACCGAGCCATTTGT-GAG 502
consensus_15866#2      CTCTGTACGCCCCAAAG--GCCAAGAGCATCATGGAGATGAAGCTGCAGTGATCG----- 561
consensus_15866#3      CTCTGTACGCCCCAAAG--GCCAAGAGCATCATGGAGATGAAGCTGCAGTGATCG----- 523
consensus_15866#1      CTCTGTACGCCCCAAAG--GCCAAGAGCATCATGGAGATGAAGTTGCAGTGATCGACGCG 431
consensus_15866#6      CTCTGTACGCCCCAA-G--GCCAAGAGCATCATGGAGATGAAGCTGCAGTGATCG----- 238
consensus_15866#5      ------------------------------------------------------------
                                                                                   

consensus_15866#0      CCACAGCACTGCCAAGGTTCTTCATTTCATTATCCAACAAGGAGAAAGAAGAGGACTTCA 590
consensus_15866#4      CGATAACA-------GGCACTCCATGTCACTCTCGCCAGAGAAGGATCGATATTACTCCA 555
consensus_15866#2      ------------------------------------------------------------
consensus_15866#3      ------------------------------------------------------------
consensus_15866#1      AGAGGTTTCGTGCTCTCTTGCTTGCTGTCCTCTTACTCAGGATTTCTTTCTGCTCTGTTT 491
consensus_15866#6      ------------------------------------------------------------
consensus_15866#5      ------------------------------------------------------------
                                                                                   

consensus_15866#0      TGGCAATGAAGGGATGCAAGCTCCCACAGAGGCCGAAGAAGAGGCCAAAGTTGATGCAGA 650
consensus_15866#4      CT------AGGGGTTCTCCATTCCCAT-----TCGAGGGAAAT----------------- 587
consensus_15866#2      --------------------------------GTGCAACTAAAACTGAGATGTTATTATG 589
consensus_15866#3      --------------------------------GTGCAACTAAAACTGAGATGTTATTATG 551
consensus_15866#1      CTAAAGTTATGTGATAGGTTCGAGGAAAATTGGTGCAATCAAAGCTGAGATGTTATCATG 551
consensus_15866#6      --------------------------------GTGCAACTAAAACTGAGATGTTATTATG 266
consensus_15866#5      ------------------------------------------------------------
                                                                                   

consensus_15866#0      AGTGCTTGCTTATGGTAAGTCCAGGAGCATGGCTGTCTGATTTGTCTCATGAGAGGTATG 710
consensus_15866#4      ------------------------------------------------------------
consensus_15866#2      TTTGCTAGATAATTTCCATGACATGGTTGCTATGAGTTCAATAAACTAGTCAATTCCACA 649
consensus_15866#3      TTTGCTAGATAATTTCCATGACATGGTTGCTATGAGTTCAATAAACTAGTCAATTCCACA 611
consensus_15866#1      TTTGCTGGATAATTGCCATGACATGGTTGCTATGAGTTGAATAAATCAGTCAATTCCACG 611
consensus_15866#6      TTTGCTAGATAATTTCCATGACATGGTTGCTATGAGTTCAATAAACTAGTCAATTCCACC 326
consensus_15866#5      ------------------------------------------------------------
                                                                                   

consensus_15866#0      AAGTTAGAGAGAAGAAGTGCGCTAGAAAGAGGGCTAGAGGATTGAAGGCTCTTTGCAATG 770
consensus_15866#4      ------------------------------------------------------------
consensus_15866#2      AAAAAAAAAACTTGT-GTTCAACATGCCATTACCTGTTAGGCAGGGC---ACCTGCCTTT 705
consensus_15866#3      ATTCCGGTCTCTTGT-GTTCAACATGCCATTACCTGTTAGGCAGGGC---AC-TGCCTTT 666
consensus_15866#1      ATTTTGGTCTCTTGT-GTTCAACATACCATTACCTGTTAACTGTGGTTGGATTGGTGCCG 670
consensus_15866#6      AAAAA------------------------------------------------------- 331
consensus_15866#5      ------------------------------------------------------------
                                                                                   

consensus_15866#0      AGAGTGATTCAGAATAGAAATACAGAGCGGGATCAATTTTTTTTGACTTTTGCTGGAGAC 830
consensus_15866#4      ------------------------------------------------------------
consensus_15866#2      TCAACATGCCATTAACTGTAAGCCAATCTGTTTGGTGGCTTTGCAAAAAAAAAAAAAAAA 765
consensus_15866#3      TCA--------------------------------------------------------- 669
consensus_15866#1      ATTGCAGCACTTCGACCAGGGCTCCTCGTTGCTGCTGGGGTCCCTCGTCCTGTTGCCGGC 730
consensus_15866#6      ------------------------------------------------------------
consensus_15866#5      ------------------------------------------------------------
                                                                                   

consensus_15866#0      AGTTAGGTACAATGCTGGTTCATTCATTAACTAGACAGATCTGAGCGGCTAATTTAGAGA 890
consensus_15866#4      ------------------------------------------------------------
consensus_15866#2      ACACAATCATGCCGTTACGTAGCGTATC-------------------------------- 793
consensus_15866#3      ------------------------------------------------------------
consensus_15866#1      TTGCAGCCACCAGTCACCGTTGCTGGTGGTGGTGCCTTGTACCTGCTGCTCTCCGTCCTG 790
consensus_15866#6      ------------------------------------------------------------
consensus_15866#5      ------------------------------------------------------------
                                                                                   

consensus_15866#0      GGGAGGATCACCGGCTCTCCTACTATCCTTATTTCACCACCCCTGTATCTCCATCCTTTT 950
consensus_15866#4      ------------------------------------------------------------
consensus_15866#2      ------------------------------------------------------------
consensus_15866#3      ------------------------------------------------------------
consensus_15866#1      ATGGCCATGGCCTTCGTCCCACTGGACGAGCTAAGAGATCTAGTGCATCTGTTCTGAATT 850
consensus_15866#6      ------------------------------------------------------------
consensus_15866#5      ------------------------------------------------------------
                                                                                   

consensus_15866#0      TTTGTTCATTCGTTGTTCCAAACAAATCGTCATCTAGAACTAAGCCTATCGACCGAAATA 1010
consensus_15866#4      ------------------------------------------------------------
consensus_15866#2      ------------------------------------------------------------
consensus_15866#3      ------------------------------------------------------------
consensus_15866#1      TTTCAGGACGGTTCATGTGTCCTGTATTGTTCTATGCTATGTGTTCCCATTTTTGTTTTT 910
consensus_15866#6      ------------------------------------------------------------
consensus_15866#5      ------------------------------------------------------------
                                                                                   

consensus_15866#0      GTTGTATATTAGATCATTCCTGATCTAGCAAGTTTGTAGCTCAGACCTTAAAGGCACCGC 1070
consensus_15866#4      ------------------------------------------------------------
consensus_15866#2      ------------------------------------------------------------
consensus_15866#3      ------------------------------------------------------------
consensus_15866#1      GTTGTATGCTATGACATTGTTGCTGCTCTGATCTTTTTTTTTTTCTGAAATAATGAAGAT 970
consensus_15866#6      ------------------------------------------------------------
consensus_15866#5      ------------------------------------------------------------
                                                                                   

consensus_15866#0      GGAGTTTGGTCA------ 1082
consensus_15866#4      ------------------
consensus_15866#2      ------------------
consensus_15866#3      ------------------
consensus_15866#1      AAGCTTGCTAGTATTTGC 988
consensus_15866#6      ------------------
consensus_15866#5      ------------------
                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)