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Oryza sativa
cluster # 1590 cluster # 1590       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1590#0 length = 896 sequences # 2  

consensusID : consensus_1590#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 896
fasta sequence
                              [TAGGGAGCTAGCTAGCTCGATCTCACCATGGCGAACTTCCAGGCCGCGCTGCTCCTCCTCCTCCTCCGCTTCCTCCTCAATCTCGCCGGCCACCGCGGAGAGGTTCTCTCGGTCTCGGCGGCGCAGCAGCAAGACCCACCCGGCGACGACCTGGTCTTTCTCAAACTGCGTAGCGGCGACGGCGACGGCACCGTCCTGGCCATGCACCGCCACGACATCTCCTTCGCCGGCTTCACCAACGGGAGCCACCACTGGCACGTCTTCCGCGGCGACGAGGACGCCATCCCCAACGCCAGGCGCCTCCCGTTCCGCAACACCTACCGCGACCTCATCGGCGGCCTCCACCACGTCCCCGGCCTGCCGCTCGGGAAAGCGGCCGCGGCGCGGGCCGCCGGGGTGCTCGCCTCCTACGACCCCGACGCCGAGGAGGGGACGGCGGCGGTGAAGCGGGCGGTGGCGGCGCTGTCGGTGATGTTCACCCAGGCCCTGCGGCTGGAGCCGATCAGGGAGACGGTGTCGAGCGGGTGGGAGAGCGGCGAGGCGCGCGTGGCGGCGGAGCACCTGCCGTACATCGAGCACTGGGACACCATGTCGTTCGAGGTCCTCCGGTGGAGGCGCACCGGCGAGTGGGACGGGCCCTTCACCGAGGTGCTGAGGAGGCGCGCCGGCATCCGCAGCGCCGGCGAGGCGCTCGCCATTGCCAAGCTGCTCGCGAACCGCAGCTTCGTGCAGCTGCTGCAGGATCACAGCCACAGCGCCTGATACTTATATGGAGTATATTCTGCATTTGCACGGGTGCTGTTTCTCTGAATAAAACGTTGCTCTCTATGCTCTAGTGTCAGTTCGTGTGTCACCGTGATGTCTGTGTTCGTTGCTCCCTTTCTGAATGGGATGAT]

[+] EMBL AK064673             [TAGGGAGCTAGCTAGCTCGATCTCACCATGGCGAACTTCCAGGCCGCGCTGCTCCTCCTCCTCCTCCGCTTCCTCCTCAATCTCGCCGGCCACCGCGGAGAGGTTCTCTCGGTCTCGGCGGCGCAGCAGCAAGACCCACCCGGCGACGACCTGGTCTTTCTCAAACTGCGTAGCGGCGACGGCGACGGCACCGTCCTGGCCATGCACCGCCACGACATCTCCTTCGCCGGCTTCACCAACGGGAGCCACCACTGGCACGTCTTCCGCGGCGACGAGGACGCCATCCCCAACGCCAGGCGCCTCCCGTTCCGCAACACCTACCGCGACCTCATCGGCGGCCTCCACCACGTCCCCGGCCTGCCGCTCGGGAAAGCGGCCGCGGCGCGGGCCGCCGGGGTGCTCGCCTCCTACGACCCCGACGCCGAGGAGGGGACGGCGGCGGTGAAGCGGGCGGTGGCGGCGCTGTCGGTGATGTTCACCCAGGCCCTGCGGCTGGAGCCGATCAGGGAGACGGTGTCGAGCGGGTGGGAGAGCGGCGAGGCGCGCGTGGCGGCGGAGCACCTGCCGTACATCGAGCACTGGGACACCATGTCGTTCGAGGTCCTCCGGTGGAGGCGCACCGGCGAGTGGGACGGGCCCTTCACCGAGGTGCTGAGGAGGCGCGCCGGCATCCGCAGCGCCGGCGAGGCGCTCGCCATTGCCAAGCTGCTCGCGAACCGCAGCTTCGTGCAGCTGCTGCAGGATCACAGCCACAGCGCCTGATACTTATATGGAGTATATTCTGCATTTGCACGGGTGCTGTTTCTCTGAATAAAACGTTGCTCTCTATGCTCTAGTGTCAGTTCGTGTGTCACCGTGATGTCTGTGTTCGTTGCTCCCTTTCTGAATGGGATGAT]
[+] EMBL AK119706             [  GGGAGCTAGCTAGCTCGATCTCACCATGGCGAACTTCCAGGCCGCGCTGCTCCTCCTCCTCCTCCGCTTCCTCCTCAATCTCGCCGGCCACCGCGGAGAGGTTCTCTCGGTCTCGGCGGCGCAGCAGCAAGACCCACCCGGCGACGACCTGGTCTTTCTCAAACTGCGTAGCGGCGACGGCGACGGCACCGTCCTGGCCATGCACCGCCACGACATCTCCTTCGCCGGCTTCACCAACGGGAGCCACCACTGGCACGTCTTCCGCGGCGACGAGGACGCCATCCCCAACGCCAGGCGCCTCCCGTTCCGCAACACCTACCGCGACCTCATCGGCGGCCTCCACCACGTCCCCGGCCTGCCGCTCGGGAAAGCGGCCGCGGCGCGGGCCGCCGGGGTGCTCGCCTCCTACGACCCCGACGCCGAGGAGGGGACGGCGGCGGTGAAGCGGGCGGTGGCGGCGCTGTCGGTGATGTTCACCCAGGCCCTGCGGCTGGAGCCGATCAGGGAGACGGTGTCGAGCGGGTGGGAGAGCGGCGAGGCGCGCGTGGCGGCGGAGCACCTGCCGTACATCGAGCACTGGGACACCATGTCGTTCGAGGTCCTCCGGTGGAGGCGCACCGGCGAGTGGGACGGGCCCTTCACCGAGGTGCTGAGGAGGCGCGCCGGCATCCGCAGCGCCGGCGAGGCGCTCGCCATTGCCAAGCTGCTCGCGAACCGCAGCTTCGTGCAGCTGCTGCAGGATCACAGCCACAGCGCCTGATACTTATATGGAGTATATTCTGCATTTGCACGGGTGCTGTTTCTCTGAATAAAACGTTGCTCTCTATGCTCTAGTGTCAGTTCGTGTGTCACCGTGATGTCTGTGTTCGTTGTTCCCTTTCTGAATGGGATGAT]


>consensus_1590#0 TAGGGAGCTAGCTAGCTCGATCTCACCATGGCGAACTTCCAGGCCGCGCTGCTCCTCCTC CTCCTCCGCTTCCTCCTCAATCTCGCCGGCCACCGCGGAGAGGTTCTCTCGGTCTCGGCG GCGCAGCAGCAAGACCCACCCGGCGACGACCTGGTCTTTCTCAAACTGCGTAGCGGCGAC GGCGACGGCACCGTCCTGGCCATGCACCGCCACGACATCTCCTTCGCCGGCTTCACCAAC GGGAGCCACCACTGGCACGTCTTCCGCGGCGACGAGGACGCCATCCCCAACGCCAGGCGC CTCCCGTTCCGCAACACCTACCGCGACCTCATCGGCGGCCTCCACCACGTCCCCGGCCTG CCGCTCGGGAAAGCGGCCGCGGCGCGGGCCGCCGGGGTGCTCGCCTCCTACGACCCCGAC GCCGAGGAGGGGACGGCGGCGGTGAAGCGGGCGGTGGCGGCGCTGTCGGTGATGTTCACC CAGGCCCTGCGGCTGGAGCCGATCAGGGAGACGGTGTCGAGCGGGTGGGAGAGCGGCGAG GCGCGCGTGGCGGCGGAGCACCTGCCGTACATCGAGCACTGGGACACCATGTCGTTCGAG GTCCTCCGGTGGAGGCGCACCGGCGAGTGGGACGGGCCCTTCACCGAGGTGCTGAGGAGG CGCGCCGGCATCCGCAGCGCCGGCGAGGCGCTCGCCATTGCCAAGCTGCTCGCGAACCGC AGCTTCGTGCAGCTGCTGCAGGATCACAGCCACAGCGCCTGATACTTATATGGAGTATAT TCTGCATTTGCACGGGTGCTGTTTCTCTGAATAAAACGTTGCTCTCTATGCTCTAGTGTC AGTTCGTGTGTCACCGTGATGTCTGTGTTCGTTGCTCCCTTTCTGAATGGGATGAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)