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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15947#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 1337 fasta sequence
[ACACAACAG-CACTCCACACACAATTACACAACAATGGCGTCCGAACAACAACGCCGGCGATCACCACCTACCATCCTCGCCGCCATCCTTCTTCTCTCCTTCTTGGCGACGGCCAACCTCGCCGGCGCCATCGATCCAGCCGGAAGGAGACGGAACGTGGTCGTCTTCTGGGGAGGCAACAAGAACGAAGGCAGCCTCCGTTCAGTCTGCGACAGT-GGACTCTACAACATC-GTCATCATCTCCTTCTACAGCCTCTT-CGGCCATGGCCGC-TACTGGGACGACCTCTCCGGCCACGACCTCCGCCACATCGGCGCCGACATCACCCACTGCCATTTCAAGGCCGTCTACGTCCTCCTCTCCATCGGCGGCGGCGATGGAAAAGACTACTCCCTACCTTCCTCCAAAT-CCG-CCG-CCGACGTCGCCGACAACCTCTACAACTCCTTCCTCGGCGGCAGCCG-CCCGGGAGTCTACCACCCATTCGGCGATGACGTCACAGTCGTCGGCATTGACTTCTTCATTGACCGCGGTCAACCCGACCACTACTACGAGATCGCCGAGCGGATCAACTACGACACCCGCCACTGGCGTGACCCCATCGGGTTCAAGCTGACGGCGACGGTGAGTTGTGCGTACGACGACTCTGACCCCAGGATGAAGAAGGCGCTGGAAACCTA-CCTTTTCC-GGCGAAT-CCACGTCAGGTTCTACGATGATCCGAGGTGTTCATACAACCATGCCGGGCTCG-CCGGCGTCATGGCGCAGTGGAACAGGTGGTCGGCGAGTTACCCTTATAATGGGAAGATTTACTTGGGGCTCGCGGCGGCGAATTTGACGGGGAAGAATGACATGGTCGCCGTCGGTGAGCTCTACCGGAAGCTGCTGCCGGCGGTGCAGAAGACGGATACCTACGGAGGAGTGATGCTTTGGAACAGCTACTATGACTCCATCACTCACTACGGACGGTATGTCAGTGCCTGGGCTTAATTATAAGATTCAGAGATCAACCAACGATAATCTCTCTATATATACGTGTGCCTCCATCATCAGTCCAATCCGTGCGTGCATATAGCTCAATCACTATCACAGTAATCATTACTTAGTACATGTTGTTTTGTAATCTTTGCTAGCG-AAAGCTAGTGTTTTTTTTTTATGTGCACAACTCGGTGTGCCGCCATACATGCATGTGTGATCGACGTATCAGTCTGTACTCTCCCTTTTTTATCTTGCTAGCGAAAGCTAGTATTTTGAGTATTATTATCTGCGCAATTTGGATACCCTACATCGCTACGTGCTTTTGTAAGCT-ACTAACCTGACGGGGTTGAACCTGTATAAAAAGTAAA]
[+] EMBL AK073267 [ACACAACAG CACTCCACACACAATTACACAACAATGGCGTCCGAACAACAACGCCGGCGATCACCACCTACCATCCTCGCCGCCATCCTTCTTCTCTCCTTCTTGGCGACGGCCAACCTCGCCGGCGCCATCGATCCAGCCGGAAGGAGACGGAACGTGGTCGTCTTCTGGGGAGGCAACAAGAACGAAGGCAGCCTCCGTTCAGTCTGCGACAGT GGACTCTACAACATC GTCATCATCTCCTTCTACAGCCTCTT CGGCCATGGCCGC TACTGGGACGACCTCTCCGGCCACGACCTCCGCCACATCGGCGCCGACATCACCCACTGCCATTTCAAGGCCGTCTACGTCCTCCTCTCCATCGGCGGCGGCGATGGAAAAGACTACTCCCTACCTTCCTCCAAAT CCG CCG CCGACGCCGCCGACAACCTCTACAACTCCTTCCTCGGCGGCAGCCG CCCGGGAGTCTACCACCCATTCGGCGATGACGTCACAGTCGTCGGCATTGACTTCTTCATTGACCGCGGTCAACCCGACCACTACTACGAGATCGCCGAGCGGATCAACTACGACACCCGCCACTGGCGTGACCCCATCGGGTTCAAGCTGACGGCGACGGTGAGTTGTGCGTACGACGACTCTGACCCCAGGATGAAGAAGGCGCTGGAAACCTA CCTTTTCC GGCGAAT CCACGTCAGGTTCTACGATGATCCGAGGTGTTCATACAACCATGCCGGGCTCG CCGGCGTCATGGCGCAGTGGAACAGGTGGTCGGCGAGTTACCCTTATAATGGGAAGATTTACTTGGGGCTCGCGGCGGCGAATTTGACGGGGAAGAATGACATGGTCGCCGTCGGTGAGCTCTACCGGAAGCTGCTGCCGGCGGTGCAGAAGACGGATACCTACGGAGGAGTGATGCTTTGGAACAGCTACTATGACTCCATCACTCACTACGGACGGTATGTCAGTGCCTGGGCTTAATTATAAGATTCAGAGATCAACCAACGATAATCTCTCTATATATACGTGTGCCTCCATCATCAGTCCAATCCGTGCGTGCATATAGCTCAATCACTATCACAGTAATCATTACTTAGTACATGTTGTTTTGTAATCTTTGCTAGCG AAAGCTAGTGTTTTTTTTTTATGTGCACAACTCGGTGTGCCGCCATACATGCATGTGTGATCGACGTATCAGTCTGTACTCTCCCTTTTTTATCTTGCTAGCGAAAGCTAGTATTTTGAGTATTATTATCTGCGCAATTTGGATACCCTACATCGCTACGTGCTTTTGTAAGCT ACTAACC ]
[+] EMBL CF313943 [ACACAACAG CACTCCACACACAATTACACAACAATGGCGTCCGAACAACAACGCCGGCGATCACCACCTACCATCCTCGCCGCCATCCTTCTTCTCTCCTTCTTGGCGACGGCCAACCTCGCCGGCGCCATCGATCCAGCCGGAAGGAGACGGAACGTGGTCGTCTTCTGGGGAGGCAACAAGAACGAAGGCAGCCTCCGTTCAGTCTGCGACAGT GGACTCTACAACATC GTCATCATCTCCTTCTACAGCCTCTT CGGCCATGGCCGC TACTGGGACGACCTCTCCGGCCACGACCTCCGCCACATCGGCGCCGACATCACCCACTGCCATTTCAAGGCCGTCTACGTCCTCCTCTCCATCGGCGGCGGCGATGGAAAAGACTACTCCCTACCTTCCTCCAAAT CCG CCG CCGACGTCGCCGACAACCTCTACAACTCCTTCCTCGGCGGCAGCCG CCCGGGAGTCTACCACCCATTCGGCGATGACGTCACAGTCGTCGGCATTGACTTCTTCATTGACCGCGGTCAACCCGACCACTACTACGAGATCGCCGAGCGGATCAACTACGACACCCGCCACTGGCGTGACCCCATCGGGTTCAA ]
[+] EMBL CF327369 [ACACAACAG CACTCCACACACAATTACACAACAATGGCGTCCGAACAACAACGCCGGCGATCACCACCTACCATCCTCGCCGCCATCCTTCTTCTCTCCTTCTTGGCGACGGCCAACCTCGCCGGCGCCATCGATCCAGCCGGAAGGAGACGGAACGTGGTCGTCTTCTGGGGAGGCAACAAGAACGAAGGCAGCCTCCGTTCAGTCTGCGACAGT GGACTCTACAACATC GTCATCATCTCCTTCTACAGCCTCTT CGGCCATGGCCGC TACTGGGACGACCTCTCCGGCCACGACCTCCGCCACATCGGCGCCGACATCACCCACTGCCATTTCAAGGCCGTCTACGTCCTCCTCTCCATCGGCGGCGGCGATGGAAAAGACTACTCCCTACCTTCCTCCAAATCCCG CCG CCGACGTCGCCGACAACCTCTACAACTCCTTCCTCGGCGGCAGCCGCCCCGGGAGTCTACCACCCATTCGGCGATGACGTCACAGTCGTCGGCATTGACTTCTTCATTTACCGCGGTCAACCCGACCACTACTACGAGATCGCCGAGCGGATCAACTACGACACCCGCCACTGGCGTGACCCCACCGGGT ]
[+] EMBL AB027425 [gggCAACAG CACTCCACACACAATTACACAACAATGGCGTCCGAACAACAACGCCGGCGATCACCACCTACCATCCTCGCCGCCATCCTTCTTCTCTCCTTCTTGGCGACGGCCAACCTCGCCGGCGCCATCGATCCAGCCGGAAGGAGACGGAACGTGGTCGTCTTCTGGGGAGGCAACAAGAACGAAGGCAGCCTCCGTTCAGTCTGCGACAGT GGACTCTACAACATC GTCATCATCTCCTTCTACAGCCTCTT CGGCCATGGCCGC TACTGGGACGACCTCTCCGGCCACGACCTCCGCCACATCGGCGCCGACATCACCCACTGCCATTTCAAGGCCGTCTACGTCCTCCTCTCCATCGGCGGCGGCGATGGAAAAGACTACTCCCTACCTTCCTCCAAAT CCG CCG CCGACGTCGCCGACAACCTCTACAACTCCTTCCTCGGCGGCAGCCG CCCGGGAGTCTACCACCCATTCGGCGATGACGTCACAGTCGTCGGCATTGACTTCTTCATTGACCGCGGTCAACCCGACCACTACTACGAGATCGCCGAGCGGATCAACTACGACACCCGCCACTGGCGTGACCCCATCGGGTTCAAGCTGACGGCGACGGTGAGTTGTGCGTACGACGACTCTGACCCCAGGATGAAGAAGGCGCTGGAAACCTA CCTTTTCC GGCGAAT CCACGTCAGGTTCTACGATGATCCGAGGTGTTCATACAACCATGCCGGGCTCG CCGGCGTCATGGCGCAGTGGAACAGGTGGTCGGCGAGTTACCCTTATAATGGGAAGATTTACTTGGGGCTCGCGGCGGCGAATTTGACGGGGAAGAATGACATGGTCGCCGTCGGTGAGCTCTACCGGAAGCTGCTGCCGGCGGTGCAGAAGACGGATACCTACGGAGGAGTGATGCTTTGGAACAGCTACTATGACTCCATCACTCACTACGGACGGTATGTCAGTGCCTGGGCTTAATTATAAGATTCAGAGATCAACCAACGATAATCTCTCTATATATACGTGTGCCTCCATCATCAGTCCAATCCGTGCGTGCATATAGCTCAATCACTATCACAGTAATCATTACTTAGTACATGTTGTTTTGTAATCTTTGCTAGCG AAAGCTAGTGTTTTTTTTTTATGTGCACAACTCGGTGTGCCGCCATACATGCATGTGTGATCGACGTATCAGTCTGTACTCTCCCTTTTTTATCTTGCTAGCGAAAGCTAGTATTTTGAGTATTATTATCTGCGCAATT ]
[+] EMBL CF329178 [ CAG CACTCCACACACAATTACACAACAATGGCGTCCGAACAACAACGCCGGCGATCACCACCTACCATCCTCGCCGCCATCCTTCTTCTCTCCTTCTTGGCGACGGCCAACCTCGCCGGCGCCATCGATCCAGCCTGAAGGAGACGGAACGTGGTCGTCTTCTGGGGAGGCAACAAGAACGAAGGCAGCCTCCGTTCAGTCTGCGACAGT GGACCCTACAACATC GTCATCATCTCCTTCTACAGCCTCTT CGGCCATGGCCGC TACTGGGACGACCTCTCCGGCCACGACCTCCGCCACATCGGCGCCGACATCACCCACTGCCATTTCAAGGCCGTCTACGTCCTCCTCTCCATCGGCGGCGGCGATGGAAAAGACTACTCCCTACCTTCCTCCAAAT CCGCCCG CCGACGTCGCCGACAACCTCTACAACTCCTTCCTCGGCGGCAGCCG CCCGGGAGTCTACCACCCATTCGGCGATGACGTCACAGTCGTCGGCATTGACTTCTTCATTGACCGCGGTCAACCCGACCACTACTACGAGATCGCCGAGCGGATCAACTACGACACCCGCCACTGGCGTGAC ]
[+] EMBL C26700 [ gagCAGNCACTCCACACACAATTACACAACANTGGCGTCCGAACAACAACGCCGGCGATCACCACCTACCATCCTCGCCGCCATCCTTNTTCTCTCCTTCTTGGCGACGGCCAACCTCGCCGGCGCCATCGNTCCAGCCGGAAGGAGACGGAACGTGGTCGTTTTCTGGGGAGGCAACAAGAACGAAGGCAGCCTCCGTTCAGTCTGCGACAGTGGGACTTTACAACATCGGTNATCATCTCCTTCTACAGCtttt ]
[+] EMBL CF314957 [ AG CACTCCACACACAATTACACAACAATGGCGTCCGAACAACAACGCCGGCGATCACCACCTACCATCCTCGCCGCCATCCTTCTTCTCTCCTTCTTGGCGACGGCCAACCTCGCCGGCGCCATCGATCCAGCCGGAAGGAGACGGAACGTGGTCGTCTTCTGGGGAGGCAACAAGAACGAAGGCAGCCTCCGTTCAGTCTGCGACAGT GGACTCTACAACATC GTCATCATCTCCTTCCACAGCCTCTT CGGCCATGGCCGC TACTGGGACGACCTCTCCGGCCACGACCTCCGCCACATCGGCGCCGACATCACCCACTGCCATTTCAAGGCCGTCTACGTCCTCCTCTCCATCGGCGGCGGCGATGGAAAAGACTACTCCCTACCTTCCTCCAAAT CCG CCGNNCGACGTCGCCGACAACCTCTACAACTCCTTCCTCGGCGGCAGCCGCCCCGGGAGTCTACCACCCATTCGGCGATGACGTCACAGTCGTCGGCATTGACTTCTTCATTGACCGCGGTCAACCCGACCACTACTACGAGATCACCGAGCGGATCAACT ]
[+] EMBL OSC105301 [ CACTCCACACACAATTACACAACAATGGCGTCCGAACAACAACGCCGGCGATCACCACCTACCATCCTCGNCGCCATCCTTCTTCTCTCCTTCTTGGCGACGGCCAACCTCGNCGGCGNCATCGATCCAGCCGGAAGGAGACGGAACGTGGTCGTTTTCTGGGGAGGCAACAAGAACGAAGGCAGCCTCCGTTCAGTNTGCGACAGT GGAC ]
[+] EMBL AU075988 [ CACTCCACACACAATTACACAACAATGGCGTCCGAACAACAACGCCGGCGATCACCACCTACCATCCTCGCCGCCATCCTTCTTCTCTCCTTCTTGGCGACGGCCAACCTCGCCGGCGCCATCGATCCAGCCGGAAGGAGACGGAACGTGGTCGTCTTCTGGGGAGGCAACAAGAACGAAGGCAGCCTCCGTTCAGTCTGCGACAGT GGACTCTACAACATC GTCATCATCTCCTTCTACAGCCTCTT CGGCCATGGCCGC TACTGGGACGACCTCTNCGG CACGACCTCCG CACATCGGCGCCGACAT ACCCACTGGCATTTCAAGGCCGTCTACGTNCTTCTCT CATCGGCGGCGGCGATGGAAAAGACTACTTCCTA CTT CTTCAAAT CCG GCG GCGACGTCGgc ]
[+] EMBL C96800 [ TCCACACACAATTACACAACAATGGCGTCCGAACAACAACGCCGGCGATCACCACCTACCATCCTCGCCGCCATCCTTCTTCTCTCCTTCTTGGCGACGGCCAACCTCGCCGGCGCCATCGATCCAGCCGGAAGGAGACGGAACGTGGTCGTCTTCTGGGGAGGCAACAAGAACGAAGGCAGCCTCCGTTCAGTCTGCGACAGT GGACTCTACAACATC GTCATCATCTCCTTCTACAGGCTCTT CGGCCATGGGCGCTTACTGGGACGACCTCTTCGGGCACGANCTTCGGCACATCGGNGGCGACATna ]
[+] EMBL D55709 [ AATTACACAACAATGGCGTCCGAACAACAACGCCGGCGATCACCACCTACCATCCTCGCCGCCATCCTTCTTCTCTCCTTCTTGGCGACGGCCAACCTCGCCGGCGCCATCGATCCAGCCGGAAGGAGACGGAACGTGGTCGTCTTCTGGGGAGGCAACAAGAACGAAGGCAGCCTCCGTTCAGTCTGCGACAGT GGACTCTACAACATC GTCATCATCTCCTTCTACAGCCTCTT CGGCCATGGCCGC TACTGGGACGACCTCTCCGGCCACGACCTCCGCCACATCGGCGCCGACATCACCCACTGCCATTTCAAGGCCGTCTACGTCCTCCTCTCCATCGGCGGCGGCGATGGAAAAGACTACTCCCTACCTTCCTCCAAAT CCG CCG CCGACGTCGCCGACAACCTCTACAACTCCTTCCTCGGCGGCAGCCG CCCGGGAGTCTACCACCCATTCGGCGATGACGTCACAGTCGTCGGCATTGACTTCTTCATTGACCGCGGTCAACCCGACCACTACTACGAGATCGCCGAGCGGATCAACTACGACACCCGCCACTGGCGTGACCCCATCGGGTTCAAGCTGACGGCGACGGTGAGTTGTGCGTACGACGACTCTGACCCCAGGATGAAGAAGGCGCTGGAAACCTA CCTTTTCC GGCGAAT CCACGTCAGGTTCTACGATGATCCGAGGTGTTCATACAACCATGCCGGGCTCG CCGGCGTCATGGCGCAGTGGAACAGGTGGTCGGCGAGTTACCCTTATAATGGGAAGATTTACTTGGGGCTCGCGGCGGCGAATTTGACGGGGAAGAATGACATGGTCGCCGTCGGTGAGCTCTACCGGAAGCTGCTGCCGGCGGTGCAGAAGACGGATACCTACGGAGGAGTGATGCTTTGGAACAGCTACTATGACTCCATCACTCACTACGGACGGTATGTCAGTGCCTGGGCTTAATTATAAGATTCAGAGATCAACCAACGATAATCTCTCTATATATACGTGTGCCTCCATCATCAGTCCAATCCGTGCGTGCATATAGCTCAATCACTATCACAGTAATCATTACTTAGTACATGTTGTTTTGTAATCTTTGCTAGCG AAAGCTAGTGTTTTTTTTTTATGTGCACAACTCGGTGTGCCGCCATACATGCATGTGTGATCGACGT ]
[+] EMBL OSC103211 [ TCCTCGCCNCCATCCTTNTTCTCTCCNTCTTGGCGACGGCCAACCTCGCCGANGCCATCGATCCANCCGGANGGNGACGGAACGAGGTCGTNTTCTAGGGAGGCAACAAGAACGAAGGCAGCCTCCGTTCAGTCTNCGACANT GGACTCTACAACATC GTCATCATCTCCTTCTACAGCCTCTTACGGCCATGGCCGC TACTGGGACGACCTCT ]
[+] EMBL CF331276 [ acggcatgaACAGT GGACTCTACAACATC GTCATCATCTCCTTCTACAGCCTCTT CGGCCATGGCCGC TACTGGGACGACCTCTCCGGCCACGACCTCCGCCACATCGGCGCCGACATCACCCACTGCCATTTCAAGGCCGTCTACGTCCTCCTCTCCATCGGCGGCGGCGATGGAAAAGACTACTCCCTACCTTCCTCCAAAT CCG CCG CCGACGTCGCCGACAACCTCTACAACTCCTTCCTCGGCGGCAGCCG CCCGGGAGTCTACCACCCATTCGGCGATGACGTCACAGTCGTCGGCATTGACTTCTTCATTGACCGCGGTCAACCCGACCACTACTACGAGATCGCCGAGCGGATCAACTACGACACCCGCCACTGGCGTGACCCCATCGGGTTCAAGCTGACGGCGACGGTGAGTTGTGCGTACGACGACTCTGACC ]
[+] EMBL CF327221 [ AACATC GTCATCATCTCCTTCTACAGCCTCTT CGGCCATGGCCGC TACTGGGACGACCTCTCCGGCCACGACCTCCGCCACATCGGCGCCGACATCACCCACTGCCATTTCAAGGCCGTCTACGTCCTCCTCTCCATCGGCGGCGGCGATGGAAAAGACTACTCCCTACCTTCCTCCAAAT CCG CCG CCGACGTCGCCGACAACCTCTACAACTCCTTCCTCGGCGGCAGCCG CCCGGGAGTCTACCACCCATTCGGCGATGACGTCACAGTCGTCGGCATTGACTTCTTCATTGACCGCGGTCAACCCGACCACTACTACGAGATCGCCGAGCGGATCAACTACGACACCCGCCACTGGCGTGACCCCATCGGGTTCAAGCTGACGGCGACGGTGAGTTGTGCGTACGACGACTCTGACCCCAGGATGAAGAAGTCGCTGGAAACCTA CCTTTTCC GGCGAAT CCACGTCAGGTTCTACGATGATCCGAGGTGTTCATACAACCATGCCGGGCTCG CCGGCGTCATGGCGCAGTGGAACAGGTGGTCGGCGAGTTACCCTTAT ]
[-] EMBL CF313942 [ TGAAGAAGGCGCTGGAAACCTACCCTTTTCC GGCGAAT CCACGTCAGGTTCTACGATGATCCGAGGTGTTCATACAACCATGCCGGGCTCG CCGGCGTCATGGCGCAGTGGAACAGGTGGTCGGCGAGTTACCCTTATAATGGGAAGATTTACTTGGGGCTCGCGGCGGCGAATTTGACGGGGAAGAATGACATGGTCGCCGTCGGTGAGCTCTACCGGAAGCTGCTGCCGGCGGTGCAGAAGACGGATACCTACGGAGGAGTGATGCTTTGGAACAGCTACTATGACTCCATCACTCACTACGGACGGTATGTCAGTGCCTGGGCTTAATTATAAGATTCAGAGATCAACCAACGATAATCTCTCTATATATACGTGTGCCTCCATCATCAGTCCAATCCGTGCGTGCATATAGCTCAATCACTATCACAGTAATCATTACTTAGTACATGTTGTTTTGTAATCTTTGCTAGCGAAAAGCTAGTGTTTTTTTTTaaaaaa ]
[+] EMBL AU082866 [ TTTTCCGGGCGAATCCCACGTCAGGTTCTACGATGATCCGAGGTGTTCATACAACCATGCCGGGCTCGCCCGGCGTCATGGCGCAGTGGAACAGGTGGTCGNCGAGTTACCCTTATAATGGGAAGATTTACTTGGGGCTCGCGGCGGCGAATTTGACGGGGAAGAATGACATGGTCGCCGTCGGTGAGCTCTACCGGAAGCTGCTGCCGGCGGTGCAGAAGACGGATA CTACGGAGGAGTGATGCTTTGGAACAGCTACTATGACTCCATCACTCACTACGGACGGTATGTCAGTGCCTGGGCTTAATTATAAGATTCAGAGATCAACCAACGATAATCTCTCTATATATACGTGTGCCTCCATCATCAGTCCAATCCGTGCGTGCATATAGCTCAATCACTATCACAGTAATCATTACTTAGTACATGTTGTTTTGTAATCTTTGCTAGCG AAAGCTAGTGTTTTTTTTTTATGTGCACAACTCGGTGTGCCGCCATACATGCATGTGTGATCGACGTATCAGTCTGTACTCTCCCTTTTTTATCTTGCTAGCGAAAGCTAGTATTTTGAGTATTATTATCTGCGCAATTTGGATACCCTAaaaaaa ]
[-] EMBL CF314958 [ AT CCACGTCAGGTTCTACGATGATCCGAGGTGTTCATACAACCATGCCGGGCTCG CCGGCGTCATGGCGCAGTGGAACAGGTGGTCGGCGAGTTACCCTTATAATGGGAAGATTTACTTGGGGCTCGCGGCGGCGAATTTGACGGGGAAGAATGACATGGTCGCCGTCGGTGAGCTCTACCGGAAGCTGCTGCCGGCGGTGCAGAAGACGGATACCTACGGAGGAGTGATGCTTTGGAACAGCTACTATGACTCCATCACTCACTACGGACGGTATGTCAGTGCCTGGGCTTAATTATAAGATTCAGAGATCAACCAACGATAATCTCTCTATATATACGTGTGCCTCCATCATCAGTCCAATCCGTGCGTGCATATAGCTCAATCACTATCACAGTAATCATTACTTAGTACATGTTGTTTTGTAATCTTTGCTAGCG AAAGCTAGTGTTTTTTTTTTATGTGCACAACTCGGTGTGCCGCCAaaaaa ]
[-] EMBL CF331277 [ GTGGAACAGGTGGTCGGCGAGTTACCCTTATAATGGGAAGATTTACTTGGGGCTCGCGGCGGCGAATTTGACGGGGAAGAATGACATGGTCGCCGTCGGTGAGCTCTACCGGAAGCTGCTGCCGGCGGTGCAGAAGACGGATACCTACGGAGGAGTGATGCTTTGGAACAGCTACTATGACTCCATCACTCACTACGGACGGTATGTCAGTGCCTGGGCTTAATTATAAGATTCAGAGATCAACCAACGATAATCTCTCTATATATACGTGTGCCTCCATCATCAGTCCAATCCGTGCGTGCATATAGCTCAATCACCATCACAGTAATCATTACTTAGTACATGTTGTTTTGTAATCTTTGCTAGCG AAAGCTAGTGTTTTTTTTTTATGTGCACAACTCGGTGTGCCGCCATACATGCATGTGTGATCGACGTATCAGTCTGTACTCTCCCTTTTTTATCTTGCTAGCGAAAGCTAGTATTTTGAGTATTATTATCTGCGCAATTTGGATACCCTACATCGCTACGTGCTTTTGTAAGCT ACTAACCTGACGGGGTTGAACCTGTATAAAAA ]
[+] EMBL AU091503 [ CGGCGANTTACCCTTATAATGGGAAGATTTACTTGGGGNTCGCGGCGGCGAATTTGACGGGGAAGAATGACATGGTCNCCGTCGGTGAGNTCTACCGGAAGNTGTTGCCGGCGGTGCAGAAGACGGATA CTACGGAGGAGTGATGCTTTGGAACAGCTACTATGACTCCATCACTCACTACGGACGGTATGTCAGTGCCTGGGCTTAATTATAAGATTCAGAGATCAACCAACGATAATCTCTCTATATATACGTGTGCCTCCATCATCAGTCCAATCCGTGCGTGCATATAGCTCAATCACTATCACAGTAATCATTACTTAGTACATGTTGTTTTGTAATCTTTGCTAGCG AAAGCTAGTGTTTTTTTTTTATGTGCACAACTCGGTGTGCCGCCATACATGCATGTGTGATCGACGTATCAGTCTGTAaaaa ]
[+] EMBL AU092050 [ TGTGCCTCCATCATCAGTCCAATCCGTGCGTGNATATAGCTCAATCACTATCACAGTAATCATTACTTAGTACATGTTGTTTTGTAATCTTTGCTAGCG AAAGCTAGTG TTTTTTTTTATGTGCACAACTCGGTGTGCCGCCATACATGCATGTGTGATCGACGTATCAGTCTGTACTCTCCCTTTTTTATCTTGCTAGCGAAAGCTAGTATTTTGAGTATTATTATCTGCGCAATTTGGATACCCTACATCGCTACGTGCTTTTGTAAGCT ACTAACC ]
[-] EMBL CF327222 [ TTTATGTGCACAACTCGGTGTTCCGCCATACATGCATGTGTGCTCGACGTATCAGTCTGTACTCTCCCTTTTTTATCTTGCTAGCGAAAGCTAGTATTTCGAGTATTATTACCTGCGCAATTTGGATACCCTACATCGCTACGTGCTTTTGTAAGTTGGGTAACCTCACGGGGTT CCCTGTAAAAAAAGTAAA]
consensusID : consensus_15947#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 608 fasta sequence
[CGGCGAATCCACGTCAGGTTCTACGATGATCCGAGGTGTTCATNCACCCATGCCGGGCTCGCCGGGCGTCATGGCNCAGTGGAACAGGTGGTCGGCGAGTTACCCTTATAATGGGAAGATTTACTTGGGGCTCGCGNCGCGAATTTGACGGGGAAGAATGACATGGTCGCCGTCGGTGAGCTCTACCGGAAGCTGCTGCCGCCGGTGCAGAAGNCGGATACCTACGGAGGAGTGATGCTTTGGAACAGCTACTATGACTCCATCACTCACTACGGACGGTATGTCAGTGCCTGGGCTTAATTATAAGATTCAGAGATCAACCAACGATAATCTCTCTATATATACGTGTGCCTCCATCATCAGTCCAATCCGTGCGTGCATATAGCTCAATCACTATCACAGTAATCATTACTTAGTACATGTTGTTTTGTAATCTTTGCTAGCGAAAGCTAGTG-TTTTTTTTTTTATGTGCACAACTCGGTGTGCCGCCATACATGCATGTGTGATCGACGTATCAGTCTGTACTCTCCCTTTTTTATCTTGCTAGCGAAAGCTAGTATTTTGAGTATTATTATCTGCGCAATTTGGATACCCTAAAAAAAAAAAAA]
[+] EMBL AU075987 [CGGCGAATCCACGTCAGGTTCTACGATGATCCGAGGTGTTCATNCACCCATGCCGGGCTCGCCGGGCGTCATGGCNCAGTGGAACAGGTGGTCGGCGAGTTACCCTTATAATGGGAAGATTTACTTGGGGCTCGCGNCGCGAATTTGACGGGGAAGAATGACATGGTCGCCGTCGGTGAGCTCTACCGGAAGCTGCTGCCGCCGGTGCAGAAGNCGGATACCTACGGAGGAGTGATGCTTTGGAACAGCTACTATGACTCCATCACTCACTACGGACGGTATGTCAGTGCCTGGGCTTAATTATAAGATTCAGAGATCAACCAACGATAATCTCTCTATATATACGTGTGCCTCCATCATCAGTCCAATCCGTGCGTGCATATAGCTCAATCACTATCACAGTAATCATTACTTAGTACATGTTGTTTTGTAATCTTTGCTAGCGAAAGCTAGTG TTTTTTTTTTTATGTGCACAACTCGGTGTGCCGCCATACATGCATGTGTGATCGACGTATCAGTCTGTACTCTCCCTTTTTTATCTTGCTAGCGAAAGCTAGTATTTTGAGTATTATTATCTGCGCAATTTGGATACCCTAAAAAAAAAAAAA]
[+] EMBL C96801 [ TATGACTCCATCACTCACTACGGACGGTATGTCAGTNCCTGGGCTTAATTATAAGATTCAGAGATCAACCAACGATAATCTCTCTATATATACGTGTGCCTCCATCATCAGNCCAANCCGTGCGTGCATATAGCTCAATCACTATCACAGTAATCATTACTTAGTACATGTTGTTTTGTAATCTTTGCTAGCGAAAGCTAGTGTTTTTTTTTTTTATGTGCACAACTCGGTGTGCCGCCATACATGCATGTGTGATCGACGTATCAGTCTGTACTCTCCCTTTTTTATCTTGCTAGCGAAAGCTAGTATTTTGAGTAaaa ]
consensusID : consensus_15947#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 510 fasta sequence
[AACCTACCTTCCGGGGAATCCACGTCAGGTTTTACGATGATCCGAGGTGTTCATACAACCATGCCGGGCTTGCCGGGGTCATGGCGCAGTGGAACAGGTGGTCGGCGAGTTACCCTTATAATGGGAAGATTTACTTGGGGCTCGCGGCGGCGAATTTGACGGGGAAAAATGACATGGTCCCCGTCGGTGAGCTTTACCGGAAACTGCTGCCGGCGGTGCAAAAAACGGATACCTACGGAGGAGTGATGCTTTGGAACAGCTACTATGACTCCATCACTCCCTACGGACGGTATGTCAGTGCCTGGGCTTAATTATAAGATTCAGAGATCAACCCACGATAATTTTTTTATATAAACGTGTGCCTCCATCATCAGTCCAATCCGTGGGTGCATATAGGTCAATCCCTATCCCAGTAATCATTACTTAGGACATGTTGTTTTGTAATTTTTGCTAGCGAAAGGTAGTGTTTTTTTTTTATGTGCCAAAAGAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CF327368 [AACCTACCTTCCGGGGAATCCACGTCAGGTTTTACGATGATCCGAGGTGTTCATACAACCATGCCGGGCTTGCCGGGGTCATGGCGCAGTGGAACAGGTGGTCGGCGAGTTACCCTTATAATGGGAAGATTTACTTGGGGCTCGCGGCGGCGAATTTGACGGGGAAAAATGACATGGTCCCCGTCGGTGAGCTTTACCGGAAACTGCTGCCGGCGGTGCAAAAAACGGATACCTACGGAGGAGTGATGCTTTGGAACAGCTACTATGACTCCATCACTCCCTACGGACGGTATGTCAGTGCCTGGGCTTAATTATAAGATTCAGAGATCAACCCACGATAATTTTTTTATATAAACGTGTGCCTCCATCATCAGTCCAATCCGTGGGTGCATATAGGTCAATCCCTATCCCAGTAATCATTACTTAGGACATGTTGTTTTGTAATTTTTGCTAGCGAAAGGTAGTGTTTTTTTTTTATGTGCCAAAAGAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_15947#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 323 fasta sequence
[GAGNACGNTGTGGGCGGATGCGTGGGCGGACGCGTGGGCGGACGGTGGGCGGACGGTGGGTCCACACACAATTACACAACAATGGCGTCCGAACAACAACGCCGGCGATCACCACCTACCATCCTCGCCGCCATCCTTCTTCTCTCCTTCTTGGCGACGGCCAACCTCGCCGGCGCCATCGATCCAGCCGGAAGGAGACGGAACGTGGTCGTCTTCTGGGGAGGCAACAAGAACGAAGGCAGCCTCCGTTCAGTCTGCGACAGTGGACTNTACAACATCGTCATCATCTCCTTCTACAGGCTTTTCGGCCATGGCGCTAATGG]
[+] EMBL OSC101221 [GAGNACGNTGTGGGCGGATGCGTGGGCGGACGCGTGGGCGGACGGTGGGCGGACGGTGGGTCCACACACAATTACACAACAATGGCGTCCGAACAACAACGCCGGCGATCACCACCTACCATCCTCGCCGCCATCCTTCTTCTCTCCTTCTTGGCGACGGCCAACCTCGCCGGCGCCATCGATCCAGCCGGAAGGAGACGGAACGTGGTCGTCTTCTGGGGAGGCAACAAGAACGAAGGCAGCCTCCGTTCAGTCTGCGACAGTGGACTNTACAACATCGTCATCATCTCCTTCTACAGGCTTTTCGGCCATGGCGCTAATGG]
consensusID : consensus_15947#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 208 fasta sequence
[TCATTACTTAGTACATGTTGTTTTGTAATCTTTGCTAGCGAAAGCTAGTGTTTTTTTTTTATGTGCACAACTCGGTGTGCCGCCATACATGCATGTGTGATCGACGTATCAGTCTGTACTCTCCCTTTTTTATCTTGCTAGCGAAAGCTAGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF329753 [TCATTACTTAGTACATGTTGTTTTGTAATCTTTGCTAGCGAAAGCTAGTGTTTTTTTTTTATGTGCACAACTCGGTGTGCCGCCATACATGCATGTGTGATCGACGTATCAGTCTGTACTCTCCCTTTTTTATCTTGCTAGCGAAAGCTAGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15947#1 ------------------------------------------------------------
consensus_15947#2 ------------------------------------------------------------
consensus_15947#4 ------------------------------------------------------------
consensus_15947#0 ACACAACAGCACTCCACACACAATTACACAACAATGGCGTCCGAACAACAACGCCGGCGA 60
consensus_15947#3 ------------------------------------------------------------
consensus_15947#1 ------------------------------------------------------------
consensus_15947#2 ------------------------------------------------------------
consensus_15947#4 ------------------------------------------------------------
consensus_15947#0 TCACCACCTACCATCCTCGCCGCCATCCTTCTTCTCTCCTTCTTGGCGACGGCCAACCTC 120
consensus_15947#3 ------------------------------------------------------------
consensus_15947#1 ------------------------------------------------------------
consensus_15947#2 ------------------------------------------------------------
consensus_15947#4 ------------------------------------------------------------
consensus_15947#0 GCCGGCGCCATCGATCCAGCCGGAAGGAGACGGAACGTGGTCGTCTTCTGGGGAGGCAAC 180
consensus_15947#3 ------------------------------------------------------------
consensus_15947#1 ------------------------------------------------------------
consensus_15947#2 ------------------------------------------------------------
consensus_15947#4 ------------------------------------------------------------
consensus_15947#0 AAGAACGAAGGCAGCCTCCGTTCAGTCTGCGACAGTGGACTCTACAACATCGTCATCATC 240
consensus_15947#3 ------------------------------------------------------------
consensus_15947#1 ------------------------------------------------------------
consensus_15947#2 ------------------------------------------------------------
consensus_15947#4 ------------------------------------------------------------
consensus_15947#0 TCCTTCTACAGCCTCTTCGGCCATGGCCGCTACTGGGACGACCTCTCCGGCCACGACCTC 300
consensus_15947#3 ------------------------------------------------------------
consensus_15947#1 ------------------------------------------------------------
consensus_15947#2 ------------------------------------------------------------
consensus_15947#4 ------------------------------------------------------------
consensus_15947#0 CGCCACATCGGCGCCGACATCACCCACTGCCATTTCAAGGCCGTCTACGTCCTCCTCTCC 360
consensus_15947#3 ------------------------------------------------------------
consensus_15947#1 ------------------------------------------------------------
consensus_15947#2 ------------------------------------------------------------
consensus_15947#4 ------------------------------------------------------------
consensus_15947#0 ATCGGCGGCGGCGATGGAAAAGACTACTCCCTACCTTCCTCCAAATCCGCCGCCGACGTC 420
consensus_15947#3 ------------------------------------------------------------
consensus_15947#1 ------------------------------------------------------------
consensus_15947#2 ------------------------------------------------------------
consensus_15947#4 ------------------------------------------------------------
consensus_15947#0 GCCGACAACCTCTACAACTCCTTCCTCGGCGGCAGCCGCCCGGGAGTCTACCACCCATTC 480
consensus_15947#3 ------------------------------------------------------------
consensus_15947#1 ------------------------------------------------------------
consensus_15947#2 ------------------------------------------------------------
consensus_15947#4 ------------------------------------------------------------
consensus_15947#0 GGCGATGACGTCACAGTCGTCGGCATTGACTTCTTCATTGACCGCGGTCAACCCGACCAC 540
consensus_15947#3 ------------------------------------------------------------
consensus_15947#1 ------------------------------------------------------------
consensus_15947#2 ------------------------------------------------------------
consensus_15947#4 ------------------------------------------------------------
consensus_15947#0 TACTACGAGATCGCCGAGCGGATCAACTACGACACCCGCCACTGGCGTGACCCCATCGGG 600
consensus_15947#3 ------------------------------------------------------------
consensus_15947#1 ------------------------------------------------------------
consensus_15947#2 ------------------------------------------------------------
consensus_15947#4 ------------------------------------------------------------
consensus_15947#0 TTCAAGCTGACGGCGACGGTGAGTTGTGCGTACGACGACTCTGACCCCAGGATGAAGAAG 660
consensus_15947#3 ------------------------------------------------------------
consensus_15947#1 ---------------------CGGCGAATCCACGTCAGGTTCTACGATGATCCGAGGTGT 39
consensus_15947#2 --------AACCTACCTT--CCGGGGAATCCACGTCAGGTTTTACGATGATCCGAGGTGT 50
consensus_15947#4 ------------------------------------------------------------
consensus_15947#0 GCGCTGGAAACCTACCTTTTCCGGCGAATCCACGTCAGGTTCTACGATGATCCGAGGTGT 720
consensus_15947#3 ------------------------------------------------------------
consensus_15947#1 TCATNCACCCATGCCGGGCTCGCCGGGCGTCATGGCNCAGTGGAACAGGTGGTCGGCGAG 99
consensus_15947#2 TCATACAACCATGCCGGGCTTGCCGGG-GTCATGGCGCAGTGGAACAGGTGGTCGGCGAG 109
consensus_15947#4 ------------------------------------------------------------
consensus_15947#0 TCATACAACCATGCCGGGCTCGCCGGC-GTCATGGCGCAGTGGAACAGGTGGTCGGCGAG 779
consensus_15947#3 ------------------------------------------------------------
consensus_15947#1 TTACCCTTATAATGGGAAGATTTACTTGGGGCTCGCGNCG-CGAATTTGACGGGGAAGAA 158
consensus_15947#2 TTACCCTTATAATGGGAAGATTTACTTGGGGCTCGCGGCGGCGAATTTGACGGGGAAAAA 169
consensus_15947#4 ------------------------------------------------------------
consensus_15947#0 TTACCCTTATAATGGGAAGATTTACTTGGGGCTCGCGGCGGCGAATTTGACGGGGAAGAA 839
consensus_15947#3 ------------------------------------------------------------
consensus_15947#1 TGACATGGTCGCCGTCGGTGAGCTCTACCGGAAGCTGCTGCCGCCGGTGCAGAAGNCGGA 218
consensus_15947#2 TGACATGGTCCCCGTCGGTGAGCTTTACCGGAAACTGCTGCCGGCGGTGCAAAAAACGGA 229
consensus_15947#4 ------------------------------------------------------------
consensus_15947#0 TGACATGGTCGCCGTCGGTGAGCTCTACCGGAAGCTGCTGCCGGCGGTGCAGAAGACGGA 899
consensus_15947#3 ------------------------------GAGNACGNTGTGGGCGGATGCGTGGGCGGA 30
consensus_15947#1 TACCTACGGAGGAGTGATGCTTTGGAACAGCTACTATGACTCCATCACTCACTACGGACG 278
consensus_15947#2 TACCTACGGAGGAGTGATGCTTTGGAACAGCTACTATGACTCCATCACTCCCTACGGACG 289
consensus_15947#4 ---------------------------------------------------------TCA 3
consensus_15947#0 TACCTACGGAGGAGTGATGCTTTGGAACAGCTACTATGACTCCATCACTCACTACGGACG 959
consensus_15947#3 CGCGTGGGCGGACGGTGGGCGGACGGTGGGTCCACACACAATTACACAACAATGGCGTCC 90
*
consensus_15947#1 GTATGTCAGTGCCTGGGCTTAA---TTATAAGATTCAGAGATCAACCAACGATAATCTCT 335
consensus_15947#2 GTATGTCAGTGCCTGGGCTTAA---TTATAAGATTCAGAGATCAACCCACGATAATTTTT 346
consensus_15947#4 TTAC-TTAGTACATGTTGTT-----TTGTAATCTTTG----CTAGCGAAAGCTAGTGTTT 53
consensus_15947#0 GTATGTCAGTGCCTGGGCTTAA---TTATAAGATTCAGAGATCAACCAACGATAATCTCT 1016
consensus_15947#3 GAACAACAACGCCGGCGATCACCACCTACCATCCTCGCCG-CCATCCTTCTTCTCTCCTT 149
* * * * * * * * * * * *
consensus_15947#1 CTATATATACGTGTGCCTC-----CATCATCAGTCCAATCCGTGCGTGCATATAGCTCAA 390
consensus_15947#2 TTATATAAACGTGTGCCTC-----CATCATCAGTCCAATCCGTGGGTGCATATAGGTCAA 401
consensus_15947#4 TTTTTT---TATGTGCACA-----ACTCGGTGTGCCG--CCATACATGCATGTG---TGA 100
consensus_15947#0 CTATATATACGTGTGCCTC-----CATCATCAGTCCAATCCGTGCGTGCATATAGCTCAA 1071
consensus_15947#3 CTTGGCGACGGCCAACCTCGCCGGCGCCATCGATCCAG-CCGGAAGGAGACGGAACGTGG 208
* * * ** ** *
consensus_15947#1 TCACTATCACAGTAATCATTACT--TAGTACATGTTGTTTTGTAATCTTTGCTAGCGAAA 448
consensus_15947#2 TCCCTATCCCAGTAATCATTACT--TAGGACATGTTGTTTTGTAATTTTTGCTAGCGAAA 459
consensus_15947#4 TCGACGT----------ATCAGT--CTGTACTCTCCCTTTTTTA--TCTTGCTAGCGAAA 146
consensus_15947#0 TCACTATCACAGTAATCATTACT--TAGTACATGTTGTTTTGTAATCTTTGCTAGCGAAA 1129
consensus_15947#3 TCGTCTTCTGGGGAGGCAACAAGAACGAAGGCAGCCTCCGTTCAGTCTGCGACAGTGGAC 268
** * * * * * * ** * *
consensus_15947#1 GCTAGTGTTTTTTTTTTTATGTGCACAACTCGGTGTGCCGCCATACATGCATGTGTGATC 508
consensus_15947#2 GGTAGTGTTTTTTTTTT-ATGTGCCAAAAGAAAAAAAAAAAAAAAAAAAAAA-------- 510
consensus_15947#4 GCTAGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 206
consensus_15947#0 GCTAGTGTTTTTTTTTT-ATGTGCACAACTCGGTGTGCCGCCATACATGCATGTGTGATC 1188
consensus_15947#3 TNTACAACATCGTCATCATCTCCTTCTACAGGCTTTTCGGCCATGGCGCTAATGG----- 323
** * * *
consensus_15947#1 GACGTATCAGTCTGTACTCTCCCTTTTTTATCTTGCTAGCGAAAGCTAGTATTTTGAGTA 568
consensus_15947#2 ------------------------------------------------------------
consensus_15947#4 AA---------------------------------------------------------- 208
consensus_15947#0 GACGTATCAGTCTGTACTCTCCCTTTTTTATCTTGCTAGCGAAAGCTAGTATTTTGAGTA 1248
consensus_15947#3 ------------------------------------------------------------
consensus_15947#1 TTATTATCTGCGCAATTTGGATACCCTAAAAAAAAAAAAA-------------------- 608
consensus_15947#2 ------------------------------------------------------------
consensus_15947#4 ------------------------------------------------------------
consensus_15947#0 TTATTATCTGCGCAATTTGGATACCCTACATCGCTACGTGCTTTTGTAAGCTACTAACCT 1308
consensus_15947#3 ------------------------------------------------------------
consensus_15947#1 -----------------------------
consensus_15947#2 -----------------------------
consensus_15947#4 -----------------------------
consensus_15947#0 GACGGGGTTGAACCTGTATAAAAAGTAAA 1337
consensus_15947#3 -----------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||