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Oryza sativa
cluster # 15999 cluster # 15999       Sequences # 27       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15999#0 length = 1368 sequences # 8  
consensus_15999#1 length = 967 sequences # 9  
consensus_15999#2 length = 956 sequences # 4  
consensus_15999#3 length = 601 sequences # 4  
consensus_15999#4 length = 514 sequences # 1  
consensus_15999#5 length = 232 sequences # 1  

consensusID : consensus_15999#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1368
fasta sequence
                              [GCAGGGAATCATTTCATTTCTTCTTCTTCTTCGCCGCCGCCGCCACCTTCCACCCCTTCAGCCGCCACTCCAATCCAAGGAGGATGAGTGAAGAGGACACCAATGCTGCTGCTGGGCAGCCCAGGCGCGCCCCTAAGCTCAACGAGAGGATCCTGTCCTCCTTGTCGAGGAGATCAGTAGCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTCCTGCTGTCTTCAACGTTGTTGTTGAGATCACCAAGGGAAGCAAAGTGAAA-TATGAGCTTGACAA-GAAAACTGGACTGATT-AAGGTCGACCGTG-TCCTATACTCATCAGTTGTGTATCCCCATAATTAT-GGTTTCATTCCAA-GGACAC-TTTGTGAA-GACAAT-GATCCAATGGAT-GTTC-TGGTCCTGATGCAGGGTGAGAAGGATGACAAGATAATAGCAGTATGTGCTGATGATCCTGAATACCGTCATTACAATGACATNCAGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTAAACGCTTCTTTGAAGACTACAAGAAGAATGAGAACAAGGGAGGTTGCTGTTGATGCATTCTTGCCTGCCAACACTGCTCGTGACGCCATTCAGTACTCCATGGACCTGTATGCGCAATATATCTTGCAAAGCTTGAGGCAGTAGAGTGCTACCCGATCTTTATCGTGAAAATATTGTATTTGTGCCAACTGCAAAACTGGAGTAGAGACTTTGTTCACAAAAAT-GGAGTGCTATGGGGCTGGCTATGATTTCCTTTACCCTCCAGCTGTGTATCAATTTGCATGTGGTTTCATACTTACAAATTATGAATAAGTGAAGTTTGGGCAGAAAAAGAAGAAAGGAAGTGTATGGAAGAAGTATAGGTTATACTTTTGATAGCAAATGCGACTTTATTGTGGCGGGGGTGGTGGTCGACTGGTTTTTNGGTTTGGGGGGGGGGGCCCGGCCCCTATTTGCCCTTTATGGGGCCGTTTTACGTCCGCCTTTGGGGCGGGGTTGTGTCCACCGTGTGGTTGGGGTGAAGACCGGGTCTGCTATACAGTAAAGTCGGAATGGGCGAAACGCGATGTAGCAGGGGGGGGGAGATTATAGAGAAGTCCTGTGGGCTTTCGGCTTGCTCAACTTTAGGAAGATGGAGAAGGGAATGTGAACCCTACCTGGAATAGCGGGTTGAGAGGGGGCGGGGTCGGGGGTGCGAGCTGTGTAGCCCTTATTGCAGCGAGAGCTAGGAAGTGGGAGTGCGATAGATTATAGGAGCCGCTTAGCGAGATTGTGGTGGTGTAGCTGGGGAGGGTGGTTAGTCGGCGCATCTATGGGCGTGAAGTAACATGGAATGTAGGGAGGAGGTACAC]

[+] EMBL CF312459             [GCAGGGAATCATTTCATTTCTTCTTCTTCTTCGCCGCCGCCGCCACCTTCCACCCCTTCAGCCGCCACTCCAATCCAAGGAGGATGAGTGAAGAGGACACCAATGCTGCTGCTGGGCAGCCCAGGCGCGCCCCTAAGCTCAACGAGAGGATCCTGTCCTCCTTGTCGAGGAGATCAGTAGCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTCCTGCTGTCTTCAACGTTGTTGTTGAGATCACCAAGGGAAGCAAAGTGAAA TATGAGCTTGACAA GAAAACTGGACTGATT AAGGTCGACCGTG TCCTATACTCATCAGTTGTGTATCCCCATAATTAT GGTTTCATTCCAA GGACAC TTTGTGAA GACAAT GATCCAATGGAT GTTC TGGTCCTGATGCAGGGTGAGAAGGATGACAAGATAATAGCAGTATGTGCTGATGATCCTGAATACCGTCATTACAATGACATNCAGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTAAACGCTTCTTTGAAGACTACAAGAAGAATGAGAACAAGGGAGGTTGCTGTTGATGCATTCTTGCCTGCCAACACTGCTCGTGACGCCATTCAGTACTCCATGGACCTGTATGCGCAATATATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL OSS11634A            [    ccgATCATTTCATTTCTTCTTCTTCTTCGCCGCCGCCGCCACCTTCCACCCCTTCAGCCGCCACTCCAATCCAAGGAGGATGAGTNAAGAGGACACCAATGCTGCTGCTGGGCAG CCAGGCGCGCCCCTAAGCTCAACGAGAGGATCCTGTCCTCCTTGTCGAGGAGATCAGTAGCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTCCTGCTGTCTTCAACGTTGTTGTTGAGATCACCAAGGGANGAAAAGTNAAATTNTGACNTTTAAAAGGAAANCTGGNCT ATTAAAGNTCGACCGTT TCCNATNCTAATAAGTTGTGTATCCCCATAATTAT GGTTTCATTCCAA G                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL C26063               [           TTTCATTTCTTCTTCTTCTTCGCCGCCGCCGCCACCTTCCACCCCTTCAGCCGCCACTCCAATCCAAGGAGGATGAGTGAAGAGGACACCAATGCTGCTGCTGGGCAGCNCAGGCGCGCCCCTAAGCTCAACGAGAGGATCCTGTCCTCCTTGTCGAGGAGATCAGTAGCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTCCTGCTGTCTTCAACGTTGTTGTTGAGATCACCAAGGGAAGCAAAGTGAAA TATGAGCTTGACAA GAAAACTGGACTGATT AAGGTCGACCGTG TCCTATACTCATCAGTTGTGTATCCCCATAATTATGGGTTTCATTCCAAGGGACACTTTTGTGAAGGACAATGGATCCAATGGATGGTTCTTGGTCCTGATGCAGGGagg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL OS1088A              [                tnTCTTCTNCTTCTTCGCCGCCGCCGCCACCTTCCACCCCTTCAGCCGNCACTCCAATCCAAGGAGGATGAGTNAAGAGGACACCAATGCTGCTGCTGGGCAGCCCAGGCGCGCCCCTAAGCTCAACGAGAGGATCCTGTNCTCCTTGTCGAGGAGATCAGTAGCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTCCTGCTGTCTTCAACGTTGTTGTTGAGATCACCAAGGGAAGCAAAGTGAAA TATGAGCTTGACAA GAAAACTGGACTGATT AAGGTCGACCGTGTTCCTATACTCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU062663             [                     TCTTCTTCTTCGCCGCCGCCGCCACCTTCCACCCCTTCAGCCGCCACTCCAATCCAAGGAGGATGAGTGAAGAGGACACCAATGCTGCTGCTGGGCAGCCCAGGCGCGCCCCTAAGCTCAACGAGAGGNTCCTGTCCTCCTTGTCGAGGAGATCAGTAGCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTNCTGATGTCTTNAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CA755108             [                        TCTTCTTCGCCGCCGCCGCCACCTTCCACCCCTTCAGCCGCCACTCCAATCCAAGGAGGATGAGTGAAGAGGACACCAATGCTGCTGCTGGGCAGCCCAGGCGCGCCCCTAAGCTCAACGAGAGGATCCTGTCCTCCTTGTCGAGGAGATCAGTAGCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTCCTGCTGTCTTCAACGTTGTTGTTGAGATCACCAAGGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CF312458             [                                                                                                                                                                                                                                                                                           ACAA GAAAACTGGACTGATT AAGGTCGACCGTG TCCTATACTCATCAGTTGTGTATCCCCATAATTAT GGTTTCATTCCAA GGACAC TTTGTGAA GACAAT GATCCAATGGAT GTTC TGGTCCTGATGCAGGGTGAGAAGGATGACAAGATAATAGCAGTATGTGCTGATGATCCTGAATACCGTCATTACAATGACAT CAGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTAAACGCTTCTTTGAAGACTACAAGAAGAATGAGAACAA GGAGGTTGCTGTTGATGCATTCTTGCCTGCCAACACTGCTCGTGACGCCATTCAGTACTCCATGGACCTGTATGCGCAATATATCTTGCAAAGCTTGAGGCAGTAGAGTGCTACCCGATCTTTATCGTGAAAATATTGTATTTGTGCCAACTGCAAAACTGGAGTAGAGACTTTGTTCACAAAAAT GGAGTGCTATGGGGCTGGCTATGATTTCCTTTACCCTCCAGCTGTGTATCAATTTGCATGTGGTTTCATACTTACAAATTATGAATAAGTGAAGTTTGGGCAGAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BE040430             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGGTTGCTGGGGATGCATTCTTGCCTGAC ACACTGCTCGTGACGCCATTCAGTACTCAGTGGACCTGTATGCGCAATATATCTTGCAAAGCTTGAGGCAGTAGAGTGCTACCCGATCTTTATCGTGAGAATGTTGTATTTGTGCCAACTGCAAAACTGGAGTGGAGACTTTGTTCACAAAAATAGGAGTGCTATGGGGCTGGCTATGATATCCTTTACCCTCCAGCTGTGTATCAATTTGCATGTGGTTTCATACTTACAGAAGGTGAATAAGTGAAGTTTGGGCGGGAGAAGAAGAAAGGAAGTGTATGGAAGAAGTATAGGTTATACTTTTGATAGCAAATGCGACTTTATTGTGGCGGGGGTGGTGGTCGACTGGTTTTTNGGTTTGGGGGGGGGGGCCCGGCCCCTATTTGCCCTTTATGGGGCCGTTTTACGTCCGCCTTTGGGGCGGGGTTGTGTCCACCGTGTGGTTGGGGTGAAGACCGGGTCTGCTATACAGTAAAGTCGGAATGGGCGAAACGCGATGTAGCAGGGGGGGGGAGATTATAGAGAAGTCCTGTGGGCTTTCGGCTTGCTCAACTTTAGGAAGATGGAGAAGGGAATGTGAACCCTACCTGGAATAGCGGGTTGAGAGGGGGCGGGGTCGGGGGTGCGAGCTGTGTAGCCCTTATTGCAGCGAGAGCTAGGAAGTGGGAGTGCGATAGATTATAGGAGCCGCTTAGCGAGATTGTGGTGGTGTAGCTGGGGAGGGTGGTTAGTCGGCGCATCTATGGGCGTGAAGTAACATGGAATGTAGGGAGGAGGTACAC]


>consensus_15999#0 GCAGGGAATCATTTCATTTCTTCTTCTTCTTCGCCGCCGCCGCCACCTTCCACCCCTTCA GCCGCCACTCCAATCCAAGGAGGATGAGTGAAGAGGACACCAATGCTGCTGCTGGGCAGC CCAGGCGCGCCCCTAAGCTCAACGAGAGGATCCTGTCCTCCTTGTCGAGGAGATCAGTAG CTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTCCTGCTGTCTTCAACGTTG TTGTTGAGATCACCAAGGGAAGCAAAGTGAAATATGAGCTTGACAAGAAAACTGGACTGA TTAAGGTCGACCGTGTCCTATACTCATCAGTTGTGTATCCCCATAATTATGGTTTCATTC CAAGGACACTTTGTGAAGACAATGATCCAATGGATGTTCTGGTCCTGATGCAGGGTGAGA AGGATGACAAGATAATAGCAGTATGTGCTGATGATCCTGAATACCGTCATTACAATGACA TNCAGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTAAACGCTTCTTTGAAGACTACAAG AAGAATGAGAACAAGGGAGGTTGCTGTTGATGCATTCTTGCCTGCCAACACTGCTCGTGA CGCCATTCAGTACTCCATGGACCTGTATGCGCAATATATCTTGCAAAGCTTGAGGCAGTA GAGTGCTACCCGATCTTTATCGTGAAAATATTGTATTTGTGCCAACTGCAAAACTGGAGT AGAGACTTTGTTCACAAAAATGGAGTGCTATGGGGCTGGCTATGATTTCCTTTACCCTCC AGCTGTGTATCAATTTGCATGTGGTTTCATACTTACAAATTATGAATAAGTGAAGTTTGG GCAGAAAAAGAAGAAAGGAAGTGTATGGAAGAAGTATAGGTTATACTTTTGATAGCAAAT GCGACTTTATTGTGGCGGGGGTGGTGGTCGACTGGTTTTTNGGTTTGGGGGGGGGGGCCC GGCCCCTATTTGCCCTTTATGGGGCCGTTTTACGTCCGCCTTTGGGGCGGGGTTGTGTCC ACCGTGTGGTTGGGGTGAAGACCGGGTCTGCTATACAGTAAAGTCGGAATGGGCGAAACG CGATGTAGCAGGGGGGGGGAGATTATAGAGAAGTCCTGTGGGCTTTCGGCTTGCTCAACT TTAGGAAGATGGAGAAGGGAATGTGAACCCTACCTGGAATAGCGGGTTGAGAGGGGGCGG GGTCGGGGGTGCGAGCTGTGTAGCCCTTATTGCAGCGAGAGCTAGGAAGTGGGAGTGCGA TAGATTATAGGAGCCGCTTAGCGAGATTGTGGTGGTGTAGCTGGGGAGGGTGGTTAGTCG GCGCATCTATGGGCGTGAAGTAACATGGAATGTAGGGAGGAGGTACAC



consensusID : consensus_15999#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 967
fasta sequence
                              [TGCAGGGAATCATTTCATTTCTTCTTCTTCTTCGCCGCCGCCGCCACCTTCCACCCCTTCAGCCGCCACTCCAATCCAAGGAGGATGAGTGAAGAGGACACCAATGCTGCTGCTGGGCAGCCCAGGCGCGCCCCTAAGCTCAACGAGAGGATCCTGTCCTCCTTGTCGAGGAGATCAGTAGCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTCCTGCTGTCTTCAACGTTGTTGTTGAGATCACCAAGGGAAGCAAAGTGAAATATGAGCTTGACAAGAAAACTGGACTGATTAAGGTCGACCGTGTCCTATACTCATCAGTTGTGTATCCCCATAATTATGGTTTCATTCCAAGGACACTTTGTG-AAGACAATGATCCAATGGAT-GTTCT-GGTCCTGATGCAGGAGCCTGTTATTCCT-GGTTCCTTCCTCCGTGCTAGAGCAATTGGCCTTATGCCCATGATTGACCAGGGTGAGAAGGATGACAAGATAATAGCAGTATGTGCTGATGATCCTGAATACCGTCATTACAATGACAT-CAGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTAAACGCTTCTTTGAAGACTACAAGAAGAATGAGAACAAGGAGGTTGCTGTTGATGCATTCTTGCCTGCCAACACTGCTCGTGACGCCATTCAGTACTCCATGGACCTGTATGCGCAATATATCTTGCAAAGCTTGAGGCAGTAGAGTGCTACCCGATCTTTATCGTGAAAATATTGTATTTGTGCCAACTGCAAAACTGGAGTAGAGACTTTGTTCACAAAAATGGAGTGCTATGGGGCTGGCTATGATTTCCTTTACCCTCCAGCTGTGTATCAATTTGCATGTGGTTTCATACTTACAAATTATGAATAAGTGAAGTTTGGGCAGACATGAATTTGTTCTGTGTCATGCTTCTGTCCCTCCGGATCGTTTATTGACAAAAAAA]

[+] EMBL AK073929             [TGCAGGGAATCATTTCATTTCTTCTTCTTCTTCGCCGCCGCCGCCACCTTCCACCCCTTCAGCCGCCACTCCAATCCAAGGAGGATGAGTGAAGAGGACACCAATGCTGCTGCTGGGCAGCCCAGGCGCGCCCCTAAGCTCAACGAGAGGATCCTGTCCTCCTTGTCGAGGAGATCAGTAGCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTCCTGCTGTCTTCAACGTTGTTGTTGAGATCACCAAGGGAAGCAAAGTGAAATATGAGCTTGACAAGAAAACTGGACTGATTAAGGTCGACCGTGTCCTATACTCATCAGTTGTGTATCCCCATAATTATGGTTTCATTCCAAGGACACTTTGTG AAGACAATGATCCAATGGAT GTTCT GGTCCTGATGCAGGAGCCTGTTATTCCT GGTTCCTTCCTCCGTGCTAGAGCAATTGGCCTTATGCCCATGATTGACCAGGGTGAGAAGGATGACAAGATAATAGCAGTATGTGCTGATGATCCTGAATACCGTCATTACAATGACAT CAGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTAAACGCTTCTTTGAAGACTACAAGAAGAATGAGAACAAGGAGGTTGCTGTTGATGCATTCTTGCCTGCCAACACTGCTCGTGACGCCATTCAGTACTCCATGGACCTGTATGCGCAATATATCTTGCAAAGCTTGAGGCAGTAGAGTGCTACCCGATCTTTATCGTGAAAATATTGTATTTGTGCCAACTGCAAAACTGGAGTAGAGACTTTGTTCACAAAAATGGAGTGCTATGGGGCTGGCTATGATTTCCTTTACCCTCCAGCTGTGTATCAATTTGCATGTGGTTTCATACTTACAAATTATGAATAAGTGAAGTTTGGGCAGACATGAATTT                                                ]
[+] EMBL CF321429             [ GCAGGGAATCATTTCATTTCTTCTTCTTCTTCGCCGCCGCCGCCACCTTCCACCCCTTCAGCCGCCACTCCAATCCAAGGAGGATGAGTGAAGAGGACACCAATGCTGCTGCTGGGCAGCCCAGGCGCGCCCCTAAGCTCAGCGAGAGGATCCTGTCCTCCTTGTCGAGGAGATCAGTAGCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTCCTGCTGTCTTCAACGTTGTTGTTGAGATCACCAAGGGAAGCAAAGTGAAATATGAGCTTGACAAGAAAACTGGACTGATTAAGGTCGACCGTGTCCTATACTCATCAGTTGTGTATCCCCATAATTATGGTTTCATTCCAAGGACACTTTGTG AAGACAATGATCCAATGGAT GTTCT GGTCCTGATGCAGGAGCCTGTTGTTCCT GGTTCCTTCCTCCGTGCTAGAGCAATTGGCCTTATGCCCATGATTGACCAGGGTGAGAAGGATGACAAGATAATAGCAGTATGTGCTGATGATCCTGAATACCGTCATTACAATGACAT CAGTGAGCTG                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF314305             [ GCAGGGAATCATTTCATTTCTTCTTCTTCTTCGCCGCCGCCGCCACCTTCCACCCCTTCAGCCGCCACTCCAATCCAAGGAGGATGAGTGAAGAGGACACCAATGCTGCTGCTGGGCAGCCCAGGCGCGCCCCTAAGCTCAACGAGAGGATCCTGTCCTCCTTGTCGAGGAGATCAGTAGCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTCCTGCTGTCTTCAACGTTGTTGTTGAGATCACCAAGGGAAGCAAAGTGAAATATGAGCTTGACAAGAAAACTGGACTGATTAAGGTCGACCGTGTCCTATACTCATCATTTGTGTATCCCCATAATTATGGTTTCATTCCAAGGACACTTTGTG AAGACAATGATCCAATGGAT GTTCT GGTCCTGATGCAGGAGCCTGTTATTCCT GGTTCCTTCCTCCGTGCTAGAGCAATTGGCCTTATGCCCATGATTGACCAGGGTGAGAAGGATGACAAGATAATAGCAGTATGTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF309262             [ GCAGGGAATCATTTCATTTCTTCTTCTTCTTCGCCGCCGCCGCCACCTTCCACCCCTTCAGCCGCCACTCCAATCCAAGGAGGATGAGTGAAGAGGACACCAATGCTGCTGCTGGGCAGCCCAGGCGCGCCCCTAAGCTCAACGAGAGGATCCTGTCCTCCTTGTCGAGGAGATCAGTAGCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTCCTGCTGTCTTCAACGTTGTTGTTGAGATCACCAAGGGAAGCAAAGTGAAATATGAGCTTGACAAGAAAACTGGACTGATTAAGGTCGACCGTGTCCTATACTCATCAGTTGTGTATCCCCATAATTATGGTTTCATTCCAAGGACACTTTGTG AAGACAATGATCCAATGGAT GTTCT GGTCCTGATGCAGGAGCCTGTTATTCCT GGTTCCTTCCTCCGTGCTAGAGCAATTGGCCTTATGCCCATGATTGACCAGGGTGAGAAGGATGACAAGATAATAGCAGTATGTGCTGATGATCCTGAATACCGTCATTACAATGACATNCAGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTAAACGCTTCTTTGAAGACTACA                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK061239             [  CAGGGAATCATTTCATTTCTTCTTCTTCTTCGCCGCCGCCGCCACCTTCCACCCCTTCAGCCGCCACTCCAATCCAAGGAGGATGAGTGAAGAGGACACCAATGCTGCTGCTGGGCAGCCCAGGCGCGCCCCTAAGCTCAACGAGAGGATCCTGTCCTCCTTGTCGAGGAGATCAGTAGCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTCCTGCTGTCTTCAACGTTGTTGTTGAGATCACCAAGGGAAGCAAAGTGAAATATGAGCTTGACAAGAAAACTGGACTGATTAAGGTCGACCGTGTCCTATACTCATCAGTTGTGTATCCCCATAATTATGGTTTCATTCCAAGGACACTTTGTG AAGACAATGATCCAATGGAT GTTCT GGTCCTGATGCAGGAGCCTGTTATTCCT GGTTCCTTCCTCCGTGCTAGAGCAATTGGCCTTATGCCCATGATTGACCAGGGTGAGAAGGATGACAAGATAATAGCAGTATGTGCTGATGATCCTGAATACCGTCATTACAATGACAT CAGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTAAACGCTTCTTTGAAGACTACAAGAAGAATGAGAACAAGGAGGTTGCTGTTGATGCATTCTTGCCTGCCAACACTGCTCGTGACGCCATTCAGTACTCCATGGACCTGTATGCGCAATATATCTTGCAAAGCTTGAGGCAGTAGAGTGCTACCCGATCTTTATCGTGAAAATATTGTATTTGTGCCAACTGCAAAACTGGAGTAGAGACTTTGTTCACAAAAATGGAGTGCTATGGGGCTGGCTATGATTTCCTTTACCCTCCAGCTGTGTATCAATTTGCATGTGGTTTCATACTTACAAATTATGAATAAGTGAAGTTTGGGCAGACATGAATT                                                 ]
[+] EMBL AU032351             [             TTCATTTCTTCTTCTTCTTCGCCGCCGCCGCCACCTTCCACCCCTTCAGCCGCCACTCCAATCCAAGGAGGATGAGTGAAGAGGACACCAATGCTGCTGCTGGGCAGCCCAGGCGCGCCCCTAAGCTCAACGAGAGGATCCTGTCCTCCTTGTCGAGGAGATCAGTAGCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTCCTGCTGTCTTCAACGTTGTTGTTGAGATCACCAAGGGAAGCAAAGTGAAATATGAGCTTGACAAGAAAACTGGACTGATTAAGGTCGANCGTGTNCTATACTCATCAGTTGTGTATCCCCATAATTATGGTTTCATTCCAAGGACACTTTGTGAAAGACAATGATCCAATGGATGGTCCTGGGTCCTGATGCAGGAGCCTGTTAATCCTGGGTTCCTTCCTCCGTGCTAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CA997906             [                               TCGCCGCCGCCGCCACCTTCCACCCCTTCAGCCGCCACTCCAATCCAAGGAGGATGAGTGAAGAGGACACCAATGCTGCTGCTGGGCAGCCCAGGCGCGCCCCTAAGCTCAACGAGAGGATCCTGTCCTCCTTGTCGAGGAGATCATTTGCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTCCTGCTGTCTTCAACGTTGTTGTTGAGATCACCAAGGGAAGCAAAGTGAAATATGAGCTTGACAAGAAAACTGGACTGATTAAGGTCGACCGTGTCCTATACTCATCAGTTGTGTATCCCCATAATTATGGTTTCATTCCAAGGACACTTTGTG AAGACAATGATCCAATGGAT GTTCT GGTCCTGATGCAGGAGCCTGTTATTCCT GGTTCCTTCCTCCGTGCTAGAGCAATTGGCCTTATGCCCATGATTGACCAGGGTGAGAAGGATGACAAGATAATAGCAGTATGTGCTGATGATCCTGAATACCGTCATTACAATGACAT CAGTGAGCTGTCTC                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU092268             [                                                                                                                                                                                                                                                                              AAATATGAGCTTGACAAGAAAACTGGACTGATTAAGNTCGACCGTGTCCTATACTCATCAGTTGTGTATCCCCATAATTATGGTTTCATTCCAAGGACACTTTGTG AAGACAATGATCCAATGGAT GTTCT GGTCCTGATGCAGGAGCCTGTTATTCCT GGTTCCTTCCTCCGTGCTAGAGCAATTGGCCTTATGCCCATGATTGACCAGGGTGAGAAGGATGACAAGATAATAGCAGTATGTGCTGATGATCCTGAATACCGTCATTACAATGACAT CAGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTAAACGCTTCTTTGAAGACTACAAGAAGAATGAGAACAAGGAGGTTGCTGTTGATGCATTCTTGCCTGCCAACACTGCTCGTGACGCCATTCAGTACTCCATGGACCTGTATGCGCAATATATCTTGCAAAGCTTGAGGCAGTAGAGTGCTACCCGATCTTTATCGTGAAAATATTGTATTTGTGCCAACTGCAAAACTGGAGTAGAGACTTTGTTCACAAAAATGGAGTGCTATGGGGCTGGCTATGATTTCCTTTACCCTCCAGCTGTGTATCAATTTGCATGTGGTTTCATACTTACAAATTATGAATAAGTGAAGTTTGGGCAGACATGAATTTGTTCTGTGTCATGCTTCTGTCCCTCCGGATCGTTTATTGACAAAAAAA]
[-] EMBL AU089668             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCAGTAGAGCGCTACCCGATTTTTATGGTGAGAATATTGTATCTGTGCCCACTGCAAAAGTGGAGTAGAGACTTTGTTCACAAAAATGGAGTGCTATGGGGCTGGATATGATTTCCTTTACCCTCCAGCTGTGTATCAATTTGCATGTGGTATCATACTTACAAATTATGAATAAGTGAAGTTTGAGCAGACATGAATTTGTTTTGTGTCATGCTTCTTTCCCTCCGGATCGTTAATTGAAAAAA   ]


>consensus_15999#1 TGCAGGGAATCATTTCATTTCTTCTTCTTCTTCGCCGCCGCCGCCACCTTCCACCCCTTC AGCCGCCACTCCAATCCAAGGAGGATGAGTGAAGAGGACACCAATGCTGCTGCTGGGCAG CCCAGGCGCGCCCCTAAGCTCAACGAGAGGATCCTGTCCTCCTTGTCGAGGAGATCAGTA GCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTCCTGCTGTCTTCAACGTT GTTGTTGAGATCACCAAGGGAAGCAAAGTGAAATATGAGCTTGACAAGAAAACTGGACTG ATTAAGGTCGACCGTGTCCTATACTCATCAGTTGTGTATCCCCATAATTATGGTTTCATT CCAAGGACACTTTGTGAAGACAATGATCCAATGGATGTTCTGGTCCTGATGCAGGAGCCT GTTATTCCTGGTTCCTTCCTCCGTGCTAGAGCAATTGGCCTTATGCCCATGATTGACCAG GGTGAGAAGGATGACAAGATAATAGCAGTATGTGCTGATGATCCTGAATACCGTCATTAC AATGACATCAGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTAAACGCTTCTTTGAAGAC TACAAGAAGAATGAGAACAAGGAGGTTGCTGTTGATGCATTCTTGCCTGCCAACACTGCT CGTGACGCCATTCAGTACTCCATGGACCTGTATGCGCAATATATCTTGCAAAGCTTGAGG CAGTAGAGTGCTACCCGATCTTTATCGTGAAAATATTGTATTTGTGCCAACTGCAAAACT GGAGTAGAGACTTTGTTCACAAAAATGGAGTGCTATGGGGCTGGCTATGATTTCCTTTAC CCTCCAGCTGTGTATCAATTTGCATGTGGTTTCATACTTACAAATTATGAATAAGTGAAG TTTGGGCAGACATGAATTTGTTCTGTGTCATGCTTCTGTCCCTCCGGATCGTTTATTGAC AAAAAAA



consensusID : consensus_15999#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 956
fasta sequence
                              [ACGAGGCCTTCCACCCCTTCAGCCGCCACTCCAATCCAAGGAGGATGAGTGAAGAGGACACCAATGCTGCTGCTGGGCAGCCCAGGCGCGCCCCTAAGCTCAACGAGAGGATCCTGTCCTCCTTGTCGAGGAGATCAGTAGCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTCCTGCTGTCTTCAACGTTGTTGTTGAGATCACCAAGGGAAGCAAAGTGAAATAT-GAGC-TTGACAAGAAAACT-GGAC-TGATTAAGGTCGACCGTGTCCTA-TACTCATCAGTTGTGTATCCCCATAATTAT-GGTTTCATTCCAA-GGACACTTTGTGAAGACAATGATCCAATGGATGTTCTGGTCCTGATGCAGGAGCCTGTTATTCCTGGTTCCTTCCTCCGTGCTAGAGCAATTGGCCTTATGCCCATGATTGACCAGGGTGAGAAGGATGACAAGATAATAGCAGTATGTGCTGATGATCCTGAATACCGTCATTACAATGACATCAGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTAAACGCTTCTTTGAAGACTACAAGAAGAATGAGAACCAGGAGGTTGCTTGTGATGCATTCTTGCCTGCCAACACTGCTCGTGACGCCATTCAGTACTTCATGGCCCTGTTGCCCAATATATCTTGCAAGCTTGGAGCAGTAGAGGGCTCCCGATCTTTATCGTGAAATGTTGATTTTGGCCACTGAAAACTGAGTAAAACTTTGTCACAAAATGGATGCTTGGGGCTGCTATGAATCCTTACCCCACTGGGTTAATGGTTGGGTTCTACTCCAATTTAATATGAGTGGCCGCCTCCACAACAATTTTTTTTCGCTTCATTATCCTCGTGGGGCCGGACAATCCCCTAGGGTCGATCGCCCCCGGCGCTTTACCTGGGTCGGAAACCCGGGCCATTATCTCTTCAAATCCTTCCC]

[+] EMBL BP185026             [ACGAGGCCTTCCACCCCTTCAGCCGCCACTCCAATCCAAGGAGGATGAGTGAAGAGGACACCAATGCTGCTGCTGGGCAGCCCAGGCGCGCCCCTAAGCTCAACGAGAGGATCCTGTCCTCCTTGTCGAGGAGATCAGTAGCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTCCTGCTGTCTTCAACGTTGTTGTTGAGATCACCAAGGGAAGCAAAGTGAAATAT GAGC TTGACAAGAAAACT GGAC TGATTAAGGTCGACCGTGTCCTA TACTCATCAGTTGTGTATCCCCATAATTAT GGTTTCATTCCAA GGACACTTTGTGAAGACAATGATCCAATGGATGTTCTGGTCCTGATGCAGGAGCCTGTTATTCCTGGTTCCTTCCTCCGTGCTAGAGCAATTGGCCTTATGCCCATGATTGACCAGGGTGAGAAGGATGACAAGATAATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BE039604             [     aCCTTCCACCCCTTCAGCCGCCACTCCAATCCAAGGAGGATGAGTGAAGAGGACACCAATGCTGCTGCTGGGCAGCCCAGGCGCGCCCCTAAGCTCAACGAGAGGATCCTGTCCTCCTTGTCGAGGAGATCAGTAGCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTCCTGCTGTCTTCAACGTTGTTGTTGAGATCACCAAGGGAAGCAAAGTGAAATAT GAGC TTGACAAGAAAACT GGAC TGATTAAGGTCGACCGTGTCCTA TACTCATCAGTTGTGTATCCCCATAATTAT GGTTTCATTCCAA GGACACTTTGTGAAGACAATGATCCAATGGATGTTCTGGTCCTGATGCAGGAGCCTGTTATTCCTGGTTCCTTCCTCCGTGCTAGAGCAATTGGCCTTATGCCCATGATTGACCAGGGTGAGAAGGATGACAAGATAATAGCAGTATGTGCTGATGATCCTGAATACCGTCATTACAATGACATCAGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTAAACGCTTCTTTGAAGACTACAAGAAGAATGAGAACCAGGAGGTTGCTTGTGATGCATTCTTGCCTGCCAACACTGCTCGTGACGCCATTCAGTACTTCATGGCCCTGTTGCCCAATATATCTTGCAAGCTTGGAGCAGTAGAGGGCTCCCGATCTTTATCGTGAAATGTTGATTTTGGCCACTGAAAACTGAGTAAAACTTTGTCACAAAATGGATGCTTGGGGCTGCTATGAATCCTTACCCCACTGGGTTAATGGTTGGGTTCTACTCCAATTTAATATGAGTGGCCGCCTCCACAACAATTTTTTTTCGCTTCATTATCCTCGTGGGGCCGGACAATCCCCTAGGGTCGATCGCCCCCGGCGCTTTACCTGGGTCGGAAACCCGGGCCATTATCTCTTCAAATCCTTCCC]
[+] EMBL CF323075             [                      gCGCCACTCCAATCCAAGGAGGATGAGTGAAGAGGACACCAATGCTGCTGCTGGGCAGCCCAGGCGCGCCCCTAAGCTCAACGAGAGGATCCTGTCCTCCTTGTCGAGGAGATCAGTAGCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTCCTGCTGTCTTCAACGTTGTTGTTGAGATCACCAAGGGAAGCAAAGTGAAATAT GAGC TTGACAAGAAAACT GGAC TGATTAAGGTCGACCGTGTCCTA TACTCATCAGTTGTGTATCCCCATAATTAT GGTTTCATTCCAA GGACACTTTGTGAAGACAATGATCCAATGGATGTTCTGGTCCTGATGCAGGAGCCTGTTATTCCTGGTTCCTTCCTCCGTGCTAGAGCAATTGGCCTTATGCCCATGATTGACCAGGGTGAGAAGGATGACAAGATAATAGCAGTATGTGCTGATGATCCTGAATACCGTCATTACAATGACATCAGTGAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL OSS11635A            [                                                                                                  CTCAACGAGAGGATCCTGTCCTCCTTGTCGAGGAGATCAGTAGCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTCCTGCTGTCTTCAACGTTGTTGTTGAGATCACCAAGGGAAGCAAAGTGAAATATGGAGCTTTGACAAGAAAACTGGGACTTGATTAAGGTCGACCGTGTCCTATTACTCATCAGTTGTGTATCCCCATAATTATGGGTTTCATTCCAAGGGACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]


>consensus_15999#2 ACGAGGCCTTCCACCCCTTCAGCCGCCACTCCAATCCAAGGAGGATGAGTGAAGAGGACA CCAATGCTGCTGCTGGGCAGCCCAGGCGCGCCCCTAAGCTCAACGAGAGGATCCTGTCCT CCTTGTCGAGGAGATCAGTAGCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTG CTCCTGCTGTCTTCAACGTTGTTGTTGAGATCACCAAGGGAAGCAAAGTGAAATATGAGC TTGACAAGAAAACTGGACTGATTAAGGTCGACCGTGTCCTATACTCATCAGTTGTGTATC CCCATAATTATGGTTTCATTCCAAGGACACTTTGTGAAGACAATGATCCAATGGATGTTC TGGTCCTGATGCAGGAGCCTGTTATTCCTGGTTCCTTCCTCCGTGCTAGAGCAATTGGCC TTATGCCCATGATTGACCAGGGTGAGAAGGATGACAAGATAATAGCAGTATGTGCTGATG ATCCTGAATACCGTCATTACAATGACATCAGTGAGCTGTCTCCTCACCGCCTCCAAGAGA TTAAACGCTTCTTTGAAGACTACAAGAAGAATGAGAACCAGGAGGTTGCTTGTGATGCAT TCTTGCCTGCCAACACTGCTCGTGACGCCATTCAGTACTTCATGGCCCTGTTGCCCAATA TATCTTGCAAGCTTGGAGCAGTAGAGGGCTCCCGATCTTTATCGTGAAATGTTGATTTTG GCCACTGAAAACTGAGTAAAACTTTGTCACAAAATGGATGCTTGGGGCTGCTATGAATCC TTACCCCACTGGGTTAATGGTTGGGTTCTACTCCAATTTAATATGAGTGGCCGCCTCCAC AACAATTTTTTTTCGCTTCATTATCCTCGTGGGGCCGGACAATCCCCTAGGGTCGATCGC CCCCGGCGCTTTACCTGGGTCGGAAACCCGGGCCATTATCTCTTCAAATCCTTCCC



consensusID : consensus_15999#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 601
fasta sequence
                              [ACACTTTGTGAAGACAATGATCCAATGGATGTTCTGGT-CCTGATGCAGGAGCCTGTTATTCCTGGTTCCTTCCTCCGTGCTAGAGCAATTGGCCTTATGCCCATGATTGACCAGGGTGAGAAGGATGACAAGATAATAGCAGTATGTGCTGATGATCCTGAATACCGTCATTACAATGACATCAGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTAAACGCTTCTTTGAAGACTACAAGAAGAATGAGAACAAGGAGGTTGCTGTTGATGCATTCTTGCCTGCCAACACTGCTCGTGACGCCATTCAGTACTCCATGGACCTGTATGCGCAATATATCTTGCAAAGCTTGAGGCAGTAGAGTGCTACCCGATCTTTATCGTGAAAATATTGTATTTGTGCCAACTGCAAAACTGGAGTAGAGACTTTGTTCACAAAAATGGAGTGCTATGGGGCTGGCTATGATTTCCTTTACCCTCCAGCTGTGTATCAATTTGCATGTGGTTTCATACTTACAAATTATGAATAAGTGAAGTTTGGGCAGACATGAATTTGTTCTGTGTCAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTATG]

[-] EMBL CF309263             [ACACTTTGTGAAGACAATGATCCAATGGATGTTCTGGT CCTGATGCAGGAGCCTGTTATTCCTGGTTCCTTCCTCCGTGCTAGAGCAATTGGCCTTATGCCCATGATTGACCAGGGTGAGAAGGATGACAAGATAATAGCAGTATGTGCTGATGATCCTGAATACCGTCATTACAATGACATCAGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTAAACGCTTCTTTGAAGACTACAAGAAGAATGAGAACAAGGAGGTTGCTGTTGATGCATTCTTGCCTGCCAACACTGCTCGTGACGCCATTCAGTACTCCATGGACCTGTATGCGCAATATATCTTGCAAAGCTTGAGGCAGTAGAGTGCTACCCGATCTTTATCGTGAAAATATTGTATTTGTGCCAACTGCAAAAATAAAGTAGAGACTTTGTTCACAAAAATGGAGTGCTATGGGGCTGGCTATGATTTCCTTTACCCTCCAGCTGTGTATCAATTTGCATGTGGTTTCATACTTACAAATTATGAATAAGTGAAGTTTGGGCAGACATGAATTTGTTCTGTGTCAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTATG]
[+] EMBL AU032352             [                             TGTTCTGGTCCCTGATGCAGGANCCTGTTTTTCCTGGTTCCTTCCTCCGTGCTAGAGCAATTGGCCTTATGCCCNTGATTGACCAGGGTGAGANGGATGNCAAGATAATAGCAGTATGTGCTGATGATCCTGAATACCGTCATTAC ATGACATCAGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTAAACGCTTCTTTGAAGACTACAAGAAGAATGAGAACAAGGAGGTTGCTGTTGATGCATTCTTGCCTGCCAACACTGCTCGTGACGCCATTCAGTACTCCATGGACCTGTATGCGCAATATATCTTGCAAAGCTTGAGGCAGTAGAGTGCTACCCGATCTTTATCGTGAAAATATTGTATTTGTGCCAACTGCAAAACTGGAGTAGAGACTTTGTTCACAAAAATGGAGTGCTATGGGGCTGGCTATGATTTCCTTTACCCTCCAGCTGTGTATCAATTTGCATGTGGTTTCATACTTACAAATTATGAATAAGTGAAGTTTGGGCAGACATGAATTTGTTCTGTGTCAAAAAAAAAAAAAA                        ]
[+] EMBL AU162835             [                                       CCTGATGCAGGAGCCTGTTATTCCTGGTTCCTTCCTCCGTGCTAGAGCAATTGGCCTTATGCCCATGATTGACCAGGGTGAGAAGGATGACAAGATAATAGCAGTATGTGCTGATGATCCTGAATACCGTCATTACAATGACATCAGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTAAACGCTTCTTTGAAGACTACAAGAAGAATGAGAACAAGGAGGTTGCTGTTGATGCATTCTTGCCTGCCAACACTGCTCGTGACGCCATTCAGTACTCCATGGACCTGTATGCGCAATATATCTTGCAAAGCTTGAGGCAGTAGAGTGCTACCCGATCTTTATCGTGAAAATATTGTATTTGTGCCAACTGCAAAACTGGAGTAGAGACTTTGTTCACAAAAATGGAGTGCTATGGGGCTGGCTATGATTTCCTTTACCCTCCAGCTGTGTATCAATTTGCATGTGGTTTCATACTTACAAATTATGAATAAGTGAAGTTTGGGCAGACATGAAATT                                                ]
[+] EMBL BI795482             [                                                                                                                                                                                                                                                                                                                                ACCTGTATGC CAATATATCTTGC AAGCTTGAGGCAGTAGAGTGCTACCCGATCTTTATCGTGAAAATATTGTATTTGTGCCAACTGC AAACTGGAGTAGAGACTTTGTTCACAAAAATGGAGTGCTATGGGGCTGGCTATGATTTCCTTTACCCTCCAGCTGTGTATC ATTTGCATGTGGTTTCATACTTAC AATTATGAATAAGTGAAGTTTGGGCAGACATGAATTTGTTCTGTGTCAAAAAAAAAA                            ]


>consensus_15999#3 ACACTTTGTGAAGACAATGATCCAATGGATGTTCTGGTCCTGATGCAGGAGCCTGTTATT CCTGGTTCCTTCCTCCGTGCTAGAGCAATTGGCCTTATGCCCATGATTGACCAGGGTGAG AAGGATGACAAGATAATAGCAGTATGTGCTGATGATCCTGAATACCGTCATTACAATGAC ATCAGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTAAACGCTTCTTTGAAGACTACAAG AAGAATGAGAACAAGGAGGTTGCTGTTGATGCATTCTTGCCTGCCAACACTGCTCGTGAC GCCATTCAGTACTCCATGGACCTGTATGCGCAATATATCTTGCAAAGCTTGAGGCAGTAG AGTGCTACCCGATCTTTATCGTGAAAATATTGTATTTGTGCCAACTGCAAAACTGGAGTA GAGACTTTGTTCACAAAAATGGAGTGCTATGGGGCTGGCTATGATTTCCTTTACCCTCCA GCTGTGTATCAATTTGCATGTGGTTTCATACTTACAAATTATGAATAAGTGAAGTTTGGG CAGACATGAATTTGTTCTGTGTCAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTAT G



consensusID : consensus_15999#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 514
fasta sequence
                              [TGGGTCTGATGCCAGGAGCCTGTTATTCCTGGTTCCTTCCTCCTGCTAGACATTGCCTTATGCCCATGATGACCAGGGTGAGAAGGATGACAAGATAATACCAGTATGTGCTGATGATCCGTGAATACCGTCATTACAATGACATCAGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTAAACGCTTCTTTGAAGACTACAAGAAGAATGAGAACAAGGAGGTTGCTGTTGATGCATTCTGTGCCTGCCAACACTGCTCGTGACCCATTCAGTACTCCATGGACCTGTATGCGCCAATATATCTTCAAGCTTGAGCAGTAGAGTGCTACCCGATCTTTATCGTGAAAATATTCGTATTTGTGCCAACTGCAAACTGGAGTAGAGACTTTGTTCACCAAAATGGAGTGCTATGGGGCTGGCTATGATTTCCTTTACCCTCCAGCTGTGTATCATTTGCATGTGGTTTCATACTTACAATTATGAATAAGTGAAGTTTGGCCGCCCAAAAAAAAAA]

[+] EMBL BI806397             [TGGGTCTGATGCCAGGAGCCTGTTATTCCTGGTTCCTTCCTCCTGCTAGACATTGCCTTATGCCCATGATGACCAGGGTGAGAAGGATGACAAGATAATACCAGTATGTGCTGATGATCCGTGAATACCGTCATTACAATGACATCAGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTAAACGCTTCTTTGAAGACTACAAGAAGAATGAGAACAAGGAGGTTGCTGTTGATGCATTCTGTGCCTGCCAACACTGCTCGTGACCCATTCAGTACTCCATGGACCTGTATGCGCCAATATATCTTCAAGCTTGAGCAGTAGAGTGCTACCCGATCTTTATCGTGAAAATATTCGTATTTGTGCCAACTGCAAACTGGAGTAGAGACTTTGTTCACCAAAATGGAGTGCTATGGGGCTGGCTATGATTTCCTTTACCCTCCAGCTGTGTATCATTTGCATGTGGTTTCATACTTACAATTATGAATAAGTGAAGTTTGGCCGCCCAAAAAAAAAA]


>consensus_15999#4 TGGGTCTGATGCCAGGAGCCTGTTATTCCTGGTTCCTTCCTCCTGCTAGACATTGCCTTA TGCCCATGATGACCAGGGTGAGAAGGATGACAAGATAATACCAGTATGTGCTGATGATCC GTGAATACCGTCATTACAATGACATCAGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTA AACGCTTCTTTGAAGACTACAAGAAGAATGAGAACAAGGAGGTTGCTGTTGATGCATTCT GTGCCTGCCAACACTGCTCGTGACCCATTCAGTACTCCATGGACCTGTATGCGCCAATAT ATCTTCAAGCTTGAGCAGTAGAGTGCTACCCGATCTTTATCGTGAAAATATTCGTATTTG TGCCAACTGCAAACTGGAGTAGAGACTTTGTTCACCAAAATGGAGTGCTATGGGGCTGGC TATGATTTCCTTTACCCTCCAGCTGTGTATCATTTGCATGTGGTTTCATACTTACAATTA TGAATAAGTGAAGTTTGGCCGCCCAAAAAAAAAA



consensusID : consensus_15999#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 232
fasta sequence
                              [CTTGAGGCAGTAGAGTGCTNCCCGANCTTTANCGTGAAAATNNTGTATTTGTGCCAACTGCAAAACTGGAGTAGAGACNTTGTTCNCNAAAATGGAGTGCTATGGGGCTGGCTATGATTTCCTTTACCCNCCAGCTGTGTATCNATTTGCATGTGGTTTCATACTTNCNAATTNTGNATAAGTGAAGTTTGGGCAGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU108111             [CTTGAGGCAGTAGAGTGCTNCCCGANCTTTANCGTGAAAATNNTGTATTTGTGCCAACTGCAAAACTGGAGTAGAGACNTTGTTCNCNAAAATGGAGTGCTATGGGGCTGGCTATGATTTCCTTTACCCNCCAGCTGTGTATCNATTTGCATGTGGTTTCATACTTNCNAATTNTGNATAAGTGAAGTTTGGGCAGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_15999#5 CTTGAGGCAGTAGAGTGCTNCCCGANCTTTANCGTGAAAATNNTGTATTTGTGCCAACTG CAAAACTGGAGTAGAGACNTTGTTCNCNAAAATGGAGTGCTATGGGGCTGGCTATGATTT CCTTTACCCNCCAGCTGTGTATCNATTTGCATGTGGTTTCATACTTNCNAATTNTGNATA AGTGAAGTTTGGGCAGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15999#3      ------------------------------------------------------------
consensus_15999#5      ------------------------------------------------------------
consensus_15999#4      ------------------------------------------------------------
consensus_15999#1      TGCAGGGAATCATTTCATTTCTTCTTCTTCTTCGCCGCCGCCGCCACCTTCCACCCCTTC 60
consensus_15999#0      ------------------------------------------------------------
consensus_15999#2      ------------------------------------------------------------
                                                                                   

consensus_15999#3      ------------------------------------------------------------
consensus_15999#5      ------------------------------------------------------------
consensus_15999#4      ------------------------------------------------------------
consensus_15999#1      AGCCGCCACTCCAATCCAAGGAGGATGAGTGAAGAGGACACCAATGCTGCTGCTGGGCAG 120
consensus_15999#0      ----------GCAGGGAATCATTTCATTTCTTCTTCTTCTTCGCCGCCGCCGCCACCTTC 50
consensus_15999#2      -------------------------------------------------ACGAGGCCTTC 11
                                                                                   

consensus_15999#3      ------------------------------------------------------------
consensus_15999#5      ------------------------------------------------------------
consensus_15999#4      ------------------------------------------------------------
consensus_15999#1      CCCAGGCGCGCCCCTAAGCTCAACGAGAGGATCCTGTCCTCCTTGTCGAGGAGATCAGTA 180
consensus_15999#0      CACCCCTTCAGCCGCCACTCCAATCCAAGGAGGATGAGTGAAGAGGACACCAATGCTGCT 110
consensus_15999#2      CACCCCTTCAGCCGCCACTCCAATCCAAGGAGGATGAGTGAAGAGGACACCAATGCTGCT 71
                                                                                   

consensus_15999#3      ------------------------------------------------------------
consensus_15999#5      ------------------------------------------------------------
consensus_15999#4      ------------------------------------------------------------
consensus_15999#1      GCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTCCTGCTGTCTTCAACGTT 240
consensus_15999#0      GCTGGGCAGCCCAGGCGCGCCCCTAAGCTCAACGAGAGGATCCTGTCCTCCTTGTCGAGG 170
consensus_15999#2      GCTGGGCAGCCCAGGCGCGCCCCTAAGCTCAACGAGAGGATCCTGTCCTCCTTGTCGAGG 131
                                                                                   

consensus_15999#3      ------------------------------------------------------------
consensus_15999#5      ------------------------------------------------------------
consensus_15999#4      ------------------------------------------------------------
consensus_15999#1      GTTGTTGAGATCACCAAGGGAAGCAAAGTGAAATATGAGCTTGACAAGAAAACTGGACTG 300
consensus_15999#0      AGATCAGTAGCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTCCTGCTGTC 230
consensus_15999#2      AGATCAGTAGCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTCCTGCTGTC 191
                                                                                   

consensus_15999#3      ------------------------------------------------------------
consensus_15999#5      ------------------------------------------------------------
consensus_15999#4      ------------------------------------------------------------
consensus_15999#1      ATTAAGGTCGACCGTGTCCTATACTCATCAGTTGTGTATCCCCATAATTATGGTTTCATT 360
consensus_15999#0      TTCAACGTTGTTGTTGAGATCACCAAGGGAAGCAAAGTGAAATATGAGCTTGACAAGAAA 290
consensus_15999#2      TTCAACGTTGTTGTTGAGATCACCAAGGGAAGCAAAGTGAAATATGAGCTTGACAAGAAA 251
                                                                                   

consensus_15999#3      ------ACACTTTGTGAAGACAATGATCCAATGGATGTTCTGGTCCTGATGCAGGAGCCT 54
consensus_15999#5      ------------------------------------------------------------
consensus_15999#4      ---------------------------------------TGGGTCTGATGCCAGGAGCCT 21
consensus_15999#1      CCAAGGACACTTTGTGAAGACAATGATCCAATGGATGTTCTGGTCCTGATGCAGGAGCCT 420
consensus_15999#0      ACTGGACTGATTAAGGTCGACCGTGTCCTATACTCATCAGTTGTGTATCCCCATAATTAT 350
consensus_15999#2      ACTGGACTGATTAAGGTCGACCGTGTCCTATACTCATCAGTTGTGTATCCCCATAATTAT 311
                                                                                   

consensus_15999#3      G----------------------------------------------------------- 55
consensus_15999#5      ------------------------------------------------------------
consensus_15999#4      G----------------------------------------------------------- 22
consensus_15999#1      G----------------------------------------------------------- 421
consensus_15999#0      GGTT-------------------------------------------------------- 354
consensus_15999#2      GGTTTCATTCCAAGGACACTTTGTGAAGACAATGATCCAATGGATGTTCTGGTCCTGATG 371
                                                                                   

consensus_15999#3      ----------TTATTCCTGGTTCCTTCCTCCGTGCTAGAGCAATTGGCCTTATGCCCATG 105
consensus_15999#5      ------------------------------------------------------------
consensus_15999#4      ----------TTATTCCTGGTTCCTTCCTC----CTGCTAGACATTGCCTTATGCCCATG 68
consensus_15999#1      ----------TTATTCCTGGTTCCTTCCTCCGTGCTAGAGCAATTGGCCTTATGCCCATG 471
consensus_15999#0      ----------TCATTCCAAGGACACTTTGTGAAGACAATGATCCAATGGATGTTCTGGTC 404
consensus_15999#2      CAGGAGCCTGTTATTCCTGGTTCCTTCCTCCGTGCTAGAGCAATTGGCCTTATGCCCATG 431
                                                                                   

consensus_15999#3      ATTGACCAGGGTGAGAAGGATGACAAGATAATAGCAGTATGTGCTGATGATCC-TGAATA 164
consensus_15999#5      ------------------------------------------------------------
consensus_15999#4      AT-GACCAGGGTGAGAAGGATGACAAGATAATACCAGTATGTGCTGATGATCCGTGAATA 127
consensus_15999#1      ATTGACCAGGGTGAGAAGGATGACAAGATAATAGCAGTATGTGCTGATGATCC-TGAATA 530
consensus_15999#0      CTGATGCAGGGTGAGAAGGATGACAAGATAATAGCAGTATGTGCTGATGATCC-TGAATA 463
consensus_15999#2      ATTGACCAGGGTGAGAAGGATGACAAGATAATAGCAGTATGTGCTGATGATCC-TGAATA 490
                                                                                   

consensus_15999#3      CCGTCATTACAATGACATC-AGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTAAACGCT 223
consensus_15999#5      ------------------------------------------------------------
consensus_15999#4      CCGTCATTACAATGACATC-AGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTAAACGCT 186
consensus_15999#1      CCGTCATTACAATGACATC-AGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTAAACGCT 589
consensus_15999#0      CCGTCATTACAATGACATNCAGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTAAACGCT 523
consensus_15999#2      CCGTCATTACAATGACATC-AGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTAAACGCT 549
                                                                                   

consensus_15999#3      TCTTTGAAGACTACAAGAAGAATGAGAACAAGG-AGGTTGCTGTTGATGCATTCT-TGCC 281
consensus_15999#5      ------------------------------------------------------------
consensus_15999#4      TCTTTGAAGACTACAAGAAGAATGAGAACAAGG-AGGTTGCTGTTGATGCATTCTGTGCC 245
consensus_15999#1      TCTTTGAAGACTACAAGAAGAATGAGAACAAGG-AGGTTGCTGTTGATGCATTCT-TGCC 647
consensus_15999#0      TCTTTGAAGACTACAAGAAGAATGAGAACAAGGGAGGTTGCTGTTGATGCATTCT-TGCC 582
consensus_15999#2      TCTTTGAAGACTACAAGAAGAATGAGAACCAGG-AGGTTGCTTGTGATGCATTCT-TGCC 607
                                                                                   

consensus_15999#3      TGCCAACACTGCTCGTGACGCCATTCAGTACTCCATGGACCTGTATGCGCAATATATCTT 341
consensus_15999#5      ------------------------------------------------------------
consensus_15999#4      TGCCAACACTGCTCGTGAC-CCATTCAGTACTCCATGGACCTGTATGCGCCA-ATATATC 303
consensus_15999#1      TGCCAACACTGCTCGTGACGCCATTCAGTACTCCATGGACCTGTATGCGCAATATATCTT 707
consensus_15999#0      TGCCAACACTGCTCGTGACGCCATTCAGTACTCCATGGACCTGTATGCGCAATATATCTT 642
consensus_15999#2      TGCCAACACTGCTCGTGACGCCATTCAGTACTTCATGGCCCTGT-TGCCCAATATATCTT 666
                                                                                   

consensus_15999#3      GCAAAGCTTGAGGCAGTAGAGTGCTACCCGATCTTTATCGTGAAAATATT-GTATTTGTG 400
consensus_15999#5      ------CTTGAGGCAGTAGAGTGCTNCCCGANCTTTANCGTGAAAATNNT-GTATTTGTG 53
consensus_15999#4      TTCAAGCTTGAG-CAGTAGAGTGCTACCCGATCTTTATCGTGAAAATATTCGTATTTGTG 362
consensus_15999#1      GCAAAGCTTGAGGCAGTAGAGTGCTACCCGATCTTTATCGTGAAAATATT-GTATTTGTG 766
consensus_15999#0      GCAAAGCTTGAGGCAGTAGAGTGCTACCCGATCTTTATCGTGAAAATATT-GTATTTGTG 701
consensus_15999#2      GC-AAGCTTGGAGCAGTAGAGGGCT-CCCGATCTTTATCGTGAAA-TGTT---GATTTTG 720
                             ****   ******** *** ***** ***** ******* *  *     ** **

consensus_15999#3      CCAACTGCAAAACTGGAGTAGAGACTTTGTTCACAAAAATGGAGTGCTATGGGGCTGGCT 460
consensus_15999#5      CCAACTGCAAAACTGGAGTAGAGACNTTGTTCNCNAAAATGGAGTGCTATGGGGCTGGCT 113
consensus_15999#4      CCAACTGCAAA-CTGGAGTAGAGACTTTGTTCACCAAAATGGAGTGCTATGGGGCTGGCT 421
consensus_15999#1      CCAACTGCAAAACTGGAGTAGAGACTTTGTTCACAAAAATGGAGTGCTATGGGGCTGGCT 826
consensus_15999#0      CCAACTGCAAAACTGGAGTAGAGACTTTGTTCACAAAAATGGAGTGCTATGGGGCTGGCT 761
consensus_15999#2      GCCACTG-AAAACTG-AGTAAA-ACTTTGT-CAC-AAAATGGA-TGCT-TGGGGCTG-CT 772
                        * **** *** *** **** * ** **** * * ******** **** ******** **

consensus_15999#3      ATGATTTCCTTTACCCTCCAGCTGTGTATCAATTTGCATGTGGTTTCATACTTACAAATT 520
consensus_15999#5      ATGATTTCCTTTACCCNCCAGCTGTGTATCNATTTGCATGTGGTTTCATACTTNCNAATT 173
consensus_15999#4      ATGATTTCCTTTACCCTCCAGCTGTGTATCA-TTTGCATGTGGTTTCATACTTACAA-TT 479
consensus_15999#1      ATGATTTCCTTTACCCTCCAGCTGTGTATCAATTTGCATGTGGTTTCATACTTACAAATT 886
consensus_15999#0      ATGATTTCCTTTACCCTCCAGCTGTGTATCAATTTGCATGTGGTTTCATACTTACAAATT 821
consensus_15999#2      ATGAATCCTTACCCCACTGGGTTAATGGTTGGGTTCTACTCCAATTTAATATGAGTGGCC 832
                       **** * * *   **     * *     *    **  *      ** *   *        

consensus_15999#3      ATGAATAAGTGAAGTTTGGGCAGACATGAATTTGTTCTGTGTCAAAAAAAAAAAAAAAAA 580
consensus_15999#5      NTGNATAAGTGAAGTTTGGGCAGACAAAAAAAAA----AAAAAAAAAAAAAAAAAAAAAA 229
consensus_15999#4      ATGAATAAGTGAAGTTTGGCCGCCCAAAAAAAAAA------------------------- 514
consensus_15999#1      ATGAATAAGTGAAGTTTGGGCAGACATGAATTTGTTCTGTGTCATGCTTCTGTCCCTCCG 946
consensus_15999#0      ATGAATAAGTGAAGTTTGGGCAGAAAAAGAAGAAAGGAAGTGTATGGAAGAAGTATAGGT 881
consensus_15999#2      GCCTCCACAACAATTTTTTTTCGCTTCATTATCCTCGTGGGGCCGGACAATCCCCTAGGG 892
                             *    ** ***                                           

consensus_15999#3      AAACACTGTCATGCCGTTATG--------------------------------------- 601
consensus_15999#5      AAA--------------------------------------------------------- 232
consensus_15999#4      ------------------------------------------------------------
consensus_15999#1      GATCGTTTATTGACAAAAAAA--------------------------------------- 967
consensus_15999#0      TATACTTTTGATAGCAAATGCGACTTTATTGTGGCGGGGGTGGTGGTCGACTGGTTTTTN 941
consensus_15999#2      TCGATCGCCCCCGGCGCTTTACCTGGGTCGGAAACCCGGGCCATTATCTCTTCAAATCCT 952
                                                                                   

consensus_15999#3      ------------------------------------------------------------
consensus_15999#5      ------------------------------------------------------------
consensus_15999#4      ------------------------------------------------------------
consensus_15999#1      ------------------------------------------------------------
consensus_15999#0      GGTTTGGGGGGGGGGGCCCGGCCCCTATTTGCCCTTTATGGGGCCGTTTTACGTCCGCCT 1001
consensus_15999#2      TCCC-------------------------------------------------------- 956
                                                                                   

consensus_15999#3      ------------------------------------------------------------
consensus_15999#5      ------------------------------------------------------------
consensus_15999#4      ------------------------------------------------------------
consensus_15999#1      ------------------------------------------------------------
consensus_15999#0      TTGGGGCGGGGTTGTGTCCACCGTGTGGTTGGGGTGAAGACCGGGTCTGCTATACAGTAA 1061
consensus_15999#2      ------------------------------------------------------------
                                                                                   

consensus_15999#3      ------------------------------------------------------------
consensus_15999#5      ------------------------------------------------------------
consensus_15999#4      ------------------------------------------------------------
consensus_15999#1      ------------------------------------------------------------
consensus_15999#0      AGTCGGAATGGGCGAAACGCGATGTAGCAGGGGGGGGGAGATTATAGAGAAGTCCTGTGG 1121
consensus_15999#2      ------------------------------------------------------------
                                                                                   

consensus_15999#3      ------------------------------------------------------------
consensus_15999#5      ------------------------------------------------------------
consensus_15999#4      ------------------------------------------------------------
consensus_15999#1      ------------------------------------------------------------
consensus_15999#0      GCTTTCGGCTTGCTCAACTTTAGGAAGATGGAGAAGGGAATGTGAACCCTACCTGGAATA 1181
consensus_15999#2      ------------------------------------------------------------
                                                                                   

consensus_15999#3      ------------------------------------------------------------
consensus_15999#5      ------------------------------------------------------------
consensus_15999#4      ------------------------------------------------------------
consensus_15999#1      ------------------------------------------------------------
consensus_15999#0      GCGGGTTGAGAGGGGGCGGGGTCGGGGGTGCGAGCTGTGTAGCCCTTATTGCAGCGAGAG 1241
consensus_15999#2      ------------------------------------------------------------
                                                                                   

consensus_15999#3      ------------------------------------------------------------
consensus_15999#5      ------------------------------------------------------------
consensus_15999#4      ------------------------------------------------------------
consensus_15999#1      ------------------------------------------------------------
consensus_15999#0      CTAGGAAGTGGGAGTGCGATAGATTATAGGAGCCGCTTAGCGAGATTGTGGTGGTGTAGC 1301
consensus_15999#2      ------------------------------------------------------------
                                                                                   

consensus_15999#3      ------------------------------------------------------------
consensus_15999#5      ------------------------------------------------------------
consensus_15999#4      ------------------------------------------------------------
consensus_15999#1      ------------------------------------------------------------
consensus_15999#0      TGGGGAGGGTGGTTAGTCGGCGCATCTATGGGCGTGAAGTAACATGGAATGTAGGGAGGA 1361
consensus_15999#2      ------------------------------------------------------------
                                                                                   

consensus_15999#3      -------
consensus_15999#5      -------
consensus_15999#4      -------
consensus_15999#1      -------
consensus_15999#0      GGTACAC 1368
consensus_15999#2      -------
                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)