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Oryza sativa
cluster # 1603 cluster # 1603       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1603#0 length = 1879 sequences # 2  

consensusID : consensus_1603#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1879
fasta sequence
                              [TCTCTCCCTCCCTTTCTCTTTCTCTCTCGAGCCATGAATGAGCTCTGCGACCTCAAGGTGCACATCAATGGCCATCACACGCTTCTTCTTCATCAGAGCGTCATGTGTGCGTTCTCGGGGAGGTTGAGGACAATGGTGACGCAGGAGAAGAAGAAGAGAAGACGAGCCGGGCGGAGAGCCTGTCCGTCAAGCTCGCCGACTTCCCCGGCGGCGGCGAGGGGTTCGAGCTCGTGGCCAGGTTCTGCTACAACAATGGCCGCGTCCCGCTCTGCCCGTCCAACCTCCCGCTCCTGCACTGCGCCGCCGTGTTCTTGGAGATGACCGAGGAGGTGTGCACCTGCAACCTCCTGACCCAAGCAGAGGCATTCGTGGACGGCCTCTACTACTGGACATGGGCCGACGTCCTCGCCGCCGTCAAGAGCTGCGAGCCATTCGCCGCGGCGGCCGACGCCTCCGGCCTCCTCGAGAGGCTCATCTCCGCGCTGTTCTCCAAGATCACCGCCAATCCGGAGACGCCCGTCGCCGCGGGGGCAGTCGGGACGCCGAACCGCTCGTCGTCGTCGTGCTCGTCGTCGCCGGACACGCTCGGGTTCGGCCGGTCGTCGTCCACCAAGACGCCCGAGTCGATGAAGCCGTGCTTCGCCAGGGAGTGGTGGTTCGACGACATGACGTCGCTGTGCCCGCAGACCATCGAGAAGGCGATGAGGGTGCTCGGCTGCTACGGCATCGAGAACAAGAACCTGATCCTGACGCGGTTCCTGCTGCACTACCTCCGCGCCGCCACGCGCAGGCCGGCGCTGTGCAGGGAGGGCGGCGGCGGACTCGCCGGACTCGCCGACACGGCCGTGCACGGCGTGGCGCTCGTCGGCGGCACCGCGTTCTCGTGCCGGGGCCTCTTCTGGGTGCTCCGGATCGTGTCGGCCGTGGGGCTGAGCAAGGAGTGCAGGCACAAACTGGAGAGGCTCATGGGGCTGATGCTGGACCAGGCCACGCTCGACGACCTCCTCGTCTCCGGCGACGACGGTGGCGTGTACGACGTGAACCTGGTCATGCGGCTGGTCAGGGTGTTCGTCGGCTCCGAGGAGGAGGCCGACTTGCCGTCGCAGAGGATGAGGAAGGTTGGAAGGCTGGTCGACAAGTACCTCGGTGAGATCTCGCCGGACCATGGCCTGAGGGTGTCCAAGTTCCTCGCCGTCGCCGAGAGCCTGCCGGACTCGGCTCGGGAATGCTACGACGGCGTGTACAGGGCATTGGATATCTACCTTGAGTCTCACCCGACGCTGACCATCGAGGAGCGGACGACGCTATGCCGGTGCCTCAACTACGAGAAGCTGACGCTGGAGGCGTGCAAGGACCTGGCCAAGAACCGGAGGATCCCGCCGGGGATCGCCGTGCAGGCGCTAGCCTCGCAGCAGTCCAAGCTCCAGATCAGACCCGCCGCCGCCGCGGCGAAGGGCACCGGCGGCTGCAGGCCTGACCCGTCGCAGACGCCGAGGAAGATCATCGTCAGCGGCAGCCGCGCCCGGAGCGTGGACCTGGACGCCATGGACGAGAAGGAGCTGCTCAAGCTGAACCTGCAGAAGATGCAGAATCGGGTGGTGGAGCTGGAGAGAGCGTGCAAGGAGATGCGAGGGCAGATGTCCAAGATGGCCAAGGGCGGCAGGCCGTCGTCGTCGTTCGGCGCCGCCGCCTGCCATCAAACCGGCGGTAGAGGCTTGCCTAGGCTGTGCTAATGATGGATCAAGCAGTAATACGTCTTCTTCTTCTTTGAATTCTTCTTTTTGTTGGTCAAGATTTGCCACCACATCACATAGGGGCATTTAACTACATAGCTCGCCTTAATTTTTCACCTGTAAATTAAGTTGATGATCTACTGCAT]

[+] EMBL AK119773             [TCTCTCCCTCCCTTTCTCTTTCTCTCTCGAGCCATGAATGAGCTCTGCGACCTCAAGGTGCACATCAATGGCCATCACACGCTTCTTCTTCATCAGAGCGTCATGTGTGCGTTCTCGGGGAGGTTGAGGACAATGGTGACGCAGGAGAAGAAGAAGAGAAGACGAGCCGGGCGGAGAGCCTGTCCGTCAAGCTCGCCGACTTCCCCGGCGGCGGCGAGGGGTTCGAGCTCGTGGCCAGGTTCTGCTACAACAATGGCCGCGTCCCGCTCTGCCCGTCCAACCTCCCGCTCCTGCACTGCGCCGCCGTGTTCTTGGAGATGACCGAGGAGGTGTGCACCTGCAACCTCCTGACCCAAGCAGAGGCATTCGTGGACGGCCTCTACTACTGGACATGGGCCGACGTCCTCGCCGCCGTCAAGAGCTGCGAGCCATTCGCCGCGGCGGCCGACGCCTCCGGCCTCCTCGAGAGGCTCATCTCCGCGCTGTTCTCCAAGATCACCGCCAATCCGGAGACGCCCGTCGCCGCGGGGGCAGTCGGGACGCCGAACCGCTCGTCGTCGTCGTGCTCGTCGTCGCCGGACACGCTCGGGTTCGGCCGGTCGTCGTCCACCAAGACGCCCGAGTCGATGAAGCCGTGCTTCGCCAGGGAGTGGTGGTTCGACGACATGACGTCGCTGTGCCCGCAGACCATCGAGAAGGCGATGAGGGTGCTCGGCTGCTACGGCATCGAGAACAAGAACCTGATCCTGACGCGGTTCCTGCTGCACTACCTCCGCGCCGCCACGCGCAGGCCGGCGCTGTGCAGGGAGGGCGGCGGCGGACTCGCCGGACTCGCCGACACGGCCGTGCACGGCGTGGCGCTCGTCGGCGGCACCGCGTTCTCGTGCCGGGGCCTCTTCTGGGTGCTCCGGATCGTGTCGGCCGTGGGGCTGAGCAAGGAGTGCAGGCACAAACTGGAGAGGCTCATGGGGCTGATGCTGGACCAGGCCACGCTCGACGACCTCCTCGTCTCCGGCGACGACGGTGGCGTGTACGACGTGAACCTGGTCATGCGGCTGGTCAGGGTGTTCGTCGGCTCCGAGGAGGAGGCCGACTTGCCGTCGCAGAGGATGAGGAAGGTTGGAAGGCTGGTCGACAAGTACCTCGGTGAGATCTCGCCGGACCATGGCCTGAGGGTGTCCAAGTTCCTCGCCGTCGCCGAGAGCCTGCCGGACTCGGCTCGGGAATGCTACGACGGCGTGTACAGGGCATTGGATATCTACCTTGAGTCTCACCCGACGCTGACCATCGAGGAGCGGACGACGCTATGCCGGTGCCTCAACTACGAGAAGCTGACGCTGGAGGCGTGCAAGGACCTGGCCAAGAACCGGAGGATCCCGCCGGGGATCGCCGTGCAGGCGCTAGCCTCGCAGCAGTCCAAGCTCCAGATCAGACCCGCCGCCGCCGCGGCGAAGGGCACCGGCGGCTGCAGGCCTGACCCGTCGCAGACGCCGAGGAAGATCATCGTCAGCGGCAGCCGCGCCCGGAGCGTGGACCTGGACGCCATGGACGAGAAGGAGCTGCTCAAGCTGAACCTGCAGAAGATGCAGAATCGGGTGGTGGAGCTGGAGAGAGCGTGCAAGGAGATGCGAGGGCAGATGTCCAAGATGGCCAAGGGCGGCAGGCCGTCGTCGTCGTTCGGCGCCGCCGCCTGCCATCAAACCGGCGGTAGAGGCTTGCCTAGGCTGTGCTAATGATGGATCAAGCAGTAATACGTCTTCTTCTTCTTTGAATTCTTCTTTTTGTTGGTCAAGATTTGCCACCACATCACATAGGGGCATTTAACTACATAGCTCGCCTTAATTTTTCACCTGTAAATTAAGTTGATGATCTACTGCAT]
[+] EMBL AK059048             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CGGCTGCTACGGCATCGAGAACAAGAACCTGATCCTGACGCGGTTCCTGCTGCACTACCTCCGCGCCGCCACGCGCAGGCCGGCGCTGTGCAGGGAGGGCGGCGGCGGACTCGCCGGACTCGCCGACACGGCCGTGCACGGCGTGGCGCTCGTCGGCGGCACCGCGTTCTCGTGCCGGGGCCTCTTCTGGGTGCTCCGGATCGTGTCGGCCGTGGGGCTGAGCAAGGAGTGCAGGCACAAACTGGAGAGGCTCATGGGGCTGATGCTGGACCAGGCCACGCTCGACGACCTCCTCGTCTCCGGCGACGACGGTGGCGTGTACGACGTGAACCTGGTCATGCGGCTGGTCAGGGTGTTCGTCGGCTCCGAGGAGGAGGCCGACTTGCCGTCGCAGAGGATGAGGAAGGTTGGAAGGCTGGTCGACAAGTACCTCGGTGAGATCTCGCCGGACCATGGCCTGAGGGTGTCCAAGTTCCTCGCCGTCGCCGAGAGCCTGCCGGACTCGGCTCGGGAATGCTACGACGGCGTGTACAGGGCATTGGATATCTACCTTGAGTCTCACCCGACGCTGACCATCGAGGAGCGGACGACGCTATGCCGGTGCCTCAACTACGAGAAGCTGACGCTGGAGGCGTGCAAGGACCTGGCCAAGAACCGGAGGATCCCGCCGGGGATCGCCGTGCAGGCGCTAGCCTCGCAGCAGTCCAAGCTCCAGATCAGACCCGCCGCCGCCGCGGCGAAGGGCACCGGCGGCTGCAGGCCTGACCCGTCGCAGACGCCGAGGAAGATCATCGTCAGCGGCAGCCGCGCCCGGAGCGTGGACCTGGACGCCATGGACGAGAAGGAGCTGCTCAAGCTGAACCTGCAGAAGATGCAGAATCGGGTGGTGGAGCTGGAGAGAGCGTGCAAGGAGATGCGAGGGCAGATGTCCAAGATGGCCAAGGGCGGCAGGCCGTCGTCGTCGTTCGGCGCCGCCGCCTGCCATCAAACCGGCGGTAGAGGCTTGCCTAGGCTGTGCTAATGATGGATCAAGCAGTAATACGTCTTCTTCTTCTTTGAATTCTTCTTTTTGTTGGTCAAGATTTGCCACCACATCACATAGGGGCATTTAACTACATAGCTCGCCTTAATTTTTCACCTGTAAATTAAGTTGAT            ]


>consensus_1603#0 TCTCTCCCTCCCTTTCTCTTTCTCTCTCGAGCCATGAATGAGCTCTGCGACCTCAAGGTG CACATCAATGGCCATCACACGCTTCTTCTTCATCAGAGCGTCATGTGTGCGTTCTCGGGG AGGTTGAGGACAATGGTGACGCAGGAGAAGAAGAAGAGAAGACGAGCCGGGCGGAGAGCC TGTCCGTCAAGCTCGCCGACTTCCCCGGCGGCGGCGAGGGGTTCGAGCTCGTGGCCAGGT TCTGCTACAACAATGGCCGCGTCCCGCTCTGCCCGTCCAACCTCCCGCTCCTGCACTGCG CCGCCGTGTTCTTGGAGATGACCGAGGAGGTGTGCACCTGCAACCTCCTGACCCAAGCAG AGGCATTCGTGGACGGCCTCTACTACTGGACATGGGCCGACGTCCTCGCCGCCGTCAAGA GCTGCGAGCCATTCGCCGCGGCGGCCGACGCCTCCGGCCTCCTCGAGAGGCTCATCTCCG CGCTGTTCTCCAAGATCACCGCCAATCCGGAGACGCCCGTCGCCGCGGGGGCAGTCGGGA CGCCGAACCGCTCGTCGTCGTCGTGCTCGTCGTCGCCGGACACGCTCGGGTTCGGCCGGT CGTCGTCCACCAAGACGCCCGAGTCGATGAAGCCGTGCTTCGCCAGGGAGTGGTGGTTCG ACGACATGACGTCGCTGTGCCCGCAGACCATCGAGAAGGCGATGAGGGTGCTCGGCTGCT ACGGCATCGAGAACAAGAACCTGATCCTGACGCGGTTCCTGCTGCACTACCTCCGCGCCG CCACGCGCAGGCCGGCGCTGTGCAGGGAGGGCGGCGGCGGACTCGCCGGACTCGCCGACA CGGCCGTGCACGGCGTGGCGCTCGTCGGCGGCACCGCGTTCTCGTGCCGGGGCCTCTTCT GGGTGCTCCGGATCGTGTCGGCCGTGGGGCTGAGCAAGGAGTGCAGGCACAAACTGGAGA GGCTCATGGGGCTGATGCTGGACCAGGCCACGCTCGACGACCTCCTCGTCTCCGGCGACG ACGGTGGCGTGTACGACGTGAACCTGGTCATGCGGCTGGTCAGGGTGTTCGTCGGCTCCG AGGAGGAGGCCGACTTGCCGTCGCAGAGGATGAGGAAGGTTGGAAGGCTGGTCGACAAGT ACCTCGGTGAGATCTCGCCGGACCATGGCCTGAGGGTGTCCAAGTTCCTCGCCGTCGCCG AGAGCCTGCCGGACTCGGCTCGGGAATGCTACGACGGCGTGTACAGGGCATTGGATATCT ACCTTGAGTCTCACCCGACGCTGACCATCGAGGAGCGGACGACGCTATGCCGGTGCCTCA ACTACGAGAAGCTGACGCTGGAGGCGTGCAAGGACCTGGCCAAGAACCGGAGGATCCCGC CGGGGATCGCCGTGCAGGCGCTAGCCTCGCAGCAGTCCAAGCTCCAGATCAGACCCGCCG CCGCCGCGGCGAAGGGCACCGGCGGCTGCAGGCCTGACCCGTCGCAGACGCCGAGGAAGA TCATCGTCAGCGGCAGCCGCGCCCGGAGCGTGGACCTGGACGCCATGGACGAGAAGGAGC TGCTCAAGCTGAACCTGCAGAAGATGCAGAATCGGGTGGTGGAGCTGGAGAGAGCGTGCA AGGAGATGCGAGGGCAGATGTCCAAGATGGCCAAGGGCGGCAGGCCGTCGTCGTCGTTCG GCGCCGCCGCCTGCCATCAAACCGGCGGTAGAGGCTTGCCTAGGCTGTGCTAATGATGGA TCAAGCAGTAATACGTCTTCTTCTTCTTTGAATTCTTCTTTTTGTTGGTCAAGATTTGCC ACCACATCACATAGGGGCATTTAACTACATAGCTCGCCTTAATTTTTCACCTGTAAATTA AGTTGATGATCTACTGCAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)