These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16037#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 26 consensus length = 857 fasta sequence [CTCAATTTGAGCAACAGAAACACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG-TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAA-TCAGCTCGACCC-GGGGCAGAGC-TGGGCCGT-GTACGT--GCCGGC-GGGCACC-AAGGGCGCGCGCGTGTGGGGGCGCACGGGCTGC-GGCTTCATCTCCGGCGGCAGCCTAGGGCAGTGCCAGACGGGCGACTGC-GGCGGCACGCTGCGGTGCGCGGCCGTCGGCGCGCCGCCCGTCACGGTGGCCGAGTTCTCGCTGGGCCAGGCGAGCAAGGACGACTACTTCGACATCTCGCTCGTGGATGGGTTCAACGCGCCAATGGCCATCGTGCCGGCGGCGGCGGGCGGGCGGCGGTGCCCCCGCGGCGGGCCTCG-GTGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGCGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTCTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT-CGCACTGAGTGAATCACTTGTTTGGGATAATGAAAATAAATGGATAAA-TCTTGTCACTTA--A--AAAAAAAAAAAAAA] [+] EMBL AK102970 [CTCAATTTGAGCAACAGAAACACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT GCCGGC GGGCACC AAGGGCGCGCGCGTGTGGGGGCGCACGGGCTGC GGCTTCATCTCCGGCGGCAGCCTAGGGCAGTGCCAGACGGGCGACTGC GGCGGCACGCTGCGGTGCGCGGCCGTCGGCGCGCCGCCCGTCACGGTGGCCGAGTTCTCGCTGGGCCAGGCGAGCAAGGACGACTACTTCGACATCTCGCTCGTGGATGGGTTCAACGCGCCAATGGCCATCGTGCCGGCGGCGGCGGGCGGGCGGCGGTGCCCCCGCGGCGGGCCTCG GTGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGCGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTCTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT CGCACTGAGTGAATCACTTGTTTGGGATAATGAAAATAAATGGAT ] [+] EMBL AK102798 [ CAATTTGAGCAACAGAAACACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT GCCGGC GGGCACC AAGGGCGCGCGCGTGTGGGGGCGCACGGGCTGC GGCTTCATCTCCGGCGGCAGCCTAGGGCAGTGCCAGACGGGCGACTGC GGCGGCACGCTGCGGTGCGCGGCCGTCGGCGCGCCGCCCGTCACGGTGGCCGAGTTCTCGCTGGGCCAGGCGAGCAAGGACGACTACTTCGACATCTCGCTCGTGGATGGGTTCAACGCGCCAATGGCCATCGTGCCGGCGGCGGCGGGCGGGCGGCGGTGCCCCCGCGGCGGGCCTCG GTGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGCGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTCTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT CGCACTGAGTGAATCACTTGTT ] [+] EMBL AK119160 [ TGAGCAACAGAAACACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTTAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT GCCGGC GGGCACC AAGGGCGCGCGCGTGTGGGGGCGCACGGGCTGC GGCTTCATCTCCGGCGGCAGCCTAGGGCAGTGCCAGACGGGCGACTGC GGCGGCACGCTGCGGTGCGCGGCCGTCGGCGCGCCGCCCGTCACGGTGGCCGAGTTCTCGCTGGGCCAGGCGAGCAAGGACGACTACTTCGACATCTCGCTCGTGGATGGGTTCAACGCGCCAATGGCCATCGTGCCGGCGGCGGCGGGCGGGCGGCGGTGCCCCCGCGGCGGGCCTCG GTGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGCGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTCTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT CGCACTGAGTGAATCACTTGTT ] [+] EMBL OSS1451A [ CAACAGAAACACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCGTTGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCANCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAATTCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT TCCGGC GGGCACC AAa ] [+] EMBL OS1321593 [ ACAGAAACACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGCAAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT GNCGGC GGGCANC AAGGGCGCGCGNGTGTGGGGGCGCACGNGCTGC GGC ] [+] EMBL AU101914 [ AAACACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT NCCGGC GGGCACC AAGGGCGCGCGCGTGTNGGGGCGCACGGGCTGC GGCTTCATCTCCGGCGGCAG CTAGGGCAGTNCCAGACGGGCGACTNC GGCGGCACG TGCGGTGCNCGGCCGTCGGCGCGCCGNCCGTCACGGTGGCCGANTTCTCGCTGGGCCATGCGAGCAAGGACGACTACTTCGACATC ] [+] EMBL OS0664A [ AAACACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT NCCGGC GGGCACC AAGGGCGCGCGCGTGTGGGGGCGCACGGGCTGC GGCTTCATCTCCGGCGGCAGCTAAGGGCAGTGCCAGACGGGCGACTGC GGCGGCACGTTGCGGTGC ] [+] EMBL AU222742 [ AAACACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT GCCGGC GGGCACC AAGGGCGCGCGCGTGTGGGGGCGCACGGGCTGC GGCTTCATCTCCGGCGGCAGCCTAGGGCAGTGCCAGACGGGCGACTGC GGCGGCACGCTGCGGTGCGCGGCCGTCGGCGCGCCGCCCGTCACGGTGGCCGAGTTCTCGCTGGGCCAGGCGAGCAAGGACGACTACTTCGACATCTCGCTCGTGGATGGGTTCAACGCGCCAATGGCCATCGTGCCGG ] [+] EMBL AU222737 [ AAACACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT GCCGGC GGGCACC AAGGGCGCGCGCGTGTGGGGGCGCACGGGCTGC GGCTTCATCTCCGGCGGCAGCCTAGGGCAGTGCCAGACGGGCGACTGC GGCGGCACGCTGCGGTGCGCGGCCGTCGGCGCGCCGCCCGTCACGGTGGCCGAGTTCTCGCTGGGCCAGGCGAGCAAGGACGACTACTTCGACATCTCGCTCGTGGATGGGTTCAACGCGCCAATGGCCATCGTGCCGG ] [+] EMBL OSS1219A [ ACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT GCCGGC GGGCACC AA ] [+] EMBL OSS1510A [ ACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGAGGTTCACCATCGTCAACAAGTNCGGGTACAACGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAATTCAGCTCGACCCGGGGGCAGANCTTGGGCCGTNTTACGTTNCCCGGCGGGGCAAC AAa ] [+] EMBL OSS1579A [ ACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACANCGTGTNGCCGGCGGCGCTGCCGTCGGGCGACGGCAA TCAGCTCGACCC GGGGCAGAGC TNGGCCGT GTACGT NCCGGC GGGCACC AAGGGCGCGCGCGTTTTGGGGCGCACGGGCTTC GGCTTCATCTTCGGCGGCAGC ] [+] EMBL CB683756 [ AACACGTCACCAATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACAGCAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT GCCGGC GGGCACC AAGGGCACGCGCGTGTGGGGGCGCACGGGCTGC GGCTTCATCTCCGGCGGCAGCCTAGGGCAGTGCCAGACGGGCGACTGC TGCGGCACGCTGCGGTGCGCGGTCGTCGGCGCGCCGCCCGTCACGGTGGCCGAGTTCTCGCTGGGCCAGGCGAGCAAGGACGACTACTTCGACATCTCGCTCGTGGATGGGTTCAACGCGCCAATGGCCATCGTGCCGGCGGCGGCGGGCGGGCGGCGGTGCCCCCGCGGCGGGCCTCG GTGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGCGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAAGCACCATCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTCTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT CGCACTGAGTGAATCACTTGTTTGGGATAATGAAAATAAATGGATAAA T ] [+] EMBL OSS2995A [ AATAATGGCGTCCCTCGCCAACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT GCCNGC GGGNA C AAGGGCGCGCGCTTTTGGGGGCGCACGGGCTGC GGCTTCATCTCCGGCGGCAG CTAGGGCAGTTCCAAACGGGCGACT ] [+] EMBL OSS2853A [ ACTCTTCTGTCCACCTCCTCCTCCTCGTCG TGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGCAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT GCCGGC GGGCACC AAGGGCGCGCGCNTTTGGGGGCGCACGGGCTGC GGCTTCATCTCCGGCGGCAGCTAAGGGCAGTTCCAGACGGGCGACTNCGGGCGGCACGTTG ] [+] EMBL C73268 [ CTCGTCG TGGTGCTCGCCGNCGCNGCCGATGCGGTGACGTTCACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGAC GNAA TCAGCTCGACCC GGGGCAGAGC TGGGCCGT GTACGT GCCGGC GGGCACC AAGGGCGCGCGCNTNTGGGGGCGCACGGGCTGC GGCTTCATCTCCGGCGGCAGCTAAGGGCAGTNCCAGANGGGCGACTGN GGCGGCACG TGCGGgt ] [+] EMBL AU094186 [ CTCCCGTCGGGCGACGGCAA TCAGTTGGACCC GGGGCANAACTTGGCCCGT GTACGT GCCGNC GGGCACCAAAGGGCGCGCGCGTGTGGGGGCGCACGGGTTGCGGGCTTCATCTCCGGCGGCAGCCTAGGGCAGTGCCAGACGGGCGACTGC GGCGGCACGCTGCGGTGCGCGGCCGTCGGCGCGCCGCCCGTCACGGTGGCCGAGTTCTCGCTGGGCCAGGCGAGCAAGGACGACTACTTCGACATCTCGCTCGTGGATGGGTTCAACGCGCCAATGGCCATCGTGCCGGCGGCGGCGGGCGGGCGGCGGTGCCCCCGCGGCGGGCCTCG GTGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGCGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTCTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT CGCACTGAGTGAATCACTTGTTTGGGATAATGAAAATAAATGGATAAA TCTTGTCACTTA A AAAAAAA ] [+] EMBL AU101915 [ GACCC GGGNCAAAGT TGGGCCCT TTTAGT GCCGGC GGGCACC AAGGGCGCGCGCNTTTGGGGCCGCACGGGTTGC GGCTTCATCTCCGGCGGCAGCNTAGGGCAGTGCCAGACGGGCGACTGC GGCGGCACGNTGCGGTGCGCGGCCGTCGGCGCGCCGCCCGTCACGTTGGCCGAGTTCTCGCTGGGCCAGGCGAGCAAGGACGACTACTTCGACATCTCGCTCGTGGATGGGTTCAACGCGCCAATGGCCATCGTGCCGGCGGCGGCGGGCGGNCGGC GTGCCCCCGCGGCGGGCCTCG GTGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGA NTGCGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTNTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT CGCACTGAGTGAATCACTTGTTTGGGATAATGAAAATAAATGGATAAA TCTTGTCACTAA A AA ] [-] EMBL CB683307 [ CC GGGGCAGAGC TGGGCCGT GTTCGT CCCGGC GGGCACC AAGGGCGCGTGCGTGTGGGGGCTCACGGGCTGC GGCTTCATCTCCGGCGGCAGCTTAGGGCAGTGCCAGACGGGGGACTGC GGCGGCACGCTGCGGTGCGCGACCGTCGGCGCGCCGCCCGTCACGGTGGCGGAGTTCTCGCTGGGCCAGGCGAGCAAGGACGAGTACTTCGACATCTCGCTCGTGGATGGGTTCAACGCGCCAATGGCCATCGTGCCGGCGGCGGCGGGCGGGAGGCGGTGCCCCCGCGGCGGGCCTCG GTGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGTGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTGTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGTCCGGGACGGCCAAGGCACCACCTTCTCCTGCCCCGCCGGCACCGACTACCAGATGGTGTTCTGCCCATGATGAGCTTGGTTTCGTACAGGGACAGTAATAACTATGTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACATGCGCACGGAGTGAATCACTTGTTTGGGAGAATGAAAATAAATGGATAAA TCTTGTCCCTCA A AAAAAAga ] [+] EMBL AU223022 [ CGGCGGGCGGGCGNCGGTGCCCCCGCGGCGGGCCTCG GTGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGCGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTNTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTCTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT CGCACTGAGTGAATCACTTGTTTGGGATAATGAAAATAAATGGATAAATTCTTGTCNCTTA A AAAAA ] [+] EMBL AU223246 [ GCGGGCGGCGGTGCCCCCNCGGCGGGCCTCG GTGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGCGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTCTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT CGCACTGAGTGAATCACTTGTTTGGGATAATGAAAATAAATGGATAAA TCTTGTCACTTA A AAAAAAAA ] [+] EMBL AU222878 [ GCGGGCGGCGGTGCCCCCCCGGCGGGCCTCG GTGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGCGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTNTTCAANAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGNCGGCCAAGGCACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTNTTCTGCCCATGATGAGCTTGGTNTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT CGCNCTGAGTGAATCNCTTGTTTGGGATAATGAAAATAAATGGATAAA A A A AAAAAAAAAAA ] [+] EMBL AU161560 [ GCGGGCGGCGGTGCCCCCGCGGCGGGCCTCG GTGCGCGGCGGAGATCACGCTGNNGTGCCCCGGCGA NTGCGCGCNAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTCTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAANCCT CGCACTGAGTGAATCACTTGTTTGGGATAATGAAAATAAATGGATAAA TCTTGTCACTAA A AA ] [+] EMBL BM421225 [ ccgcggacgCGTGGGCGGACGCGTGGGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGCGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTCTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT CGCACTGAGTGAATCACTTGTTTGGGATAATGAAAATAAATGGATAAA TCTGGTCA A A AAAA ] [+] EMBL BM038769 [ gGGC GGACGCGTGGGC CGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGCGCGCCAAGGCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAGTTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCACCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTCTCGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT CGCACTGAGTGAATCACTTGTTTGGGATAATGAAAATAAATGGATAAA TCTTGTCA A A AAA ] [+] EMBL AU222738 [ GGGNACAGCACGTGCGGGCCGACCAAGGACACGGAGTTTTTCAAAAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCNCCACCTTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTNTCGTACAGGGNCAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAACCT CGCNCTGAGTGAATCACTTGTTTGGGATAATGAAAATAAATGGATAAA TCTTGTCACTTATGATCAAAAAAAAAAAAAA] consensusID : consensus_16037#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 189 fasta sequence [ACTTTTCTTTCCACCTCCTCCTCCTCGTGGTGGTGCTCGCNGCCGCCGCCNATGCGGTGACGTTNACNATCGTNAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCNACGNAATNAGCTCGACCCGGGGNANAGCTGGGCCGTNTACGTGCCGGCGGGCACAAGGGCGCGCGCTTT] [+] EMBL OSS3835A [ACTTTTCTTTCCACCTCCTCCTCCTCGTGGTGGTGCTCGCNGCCGCCGCCNATGCGGTGACGTTNACNATCGTNAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCNACGNAATNAGCTCGACCCGGGGNANAGCTGGGCCGTNTACGTGCCGGCGGGCACAAGGGCGCGCGCTTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_16037#0 CTCAATTTGAGCAACAGAAACACTAACACGTCACCAATAATGGCGTCCCTCGCCAACTCT 60 consensus_16037#1 -------------------------------------------------------ACTTT 5 *** * consensus_16037#0 TCTGTCCACCTCCTCCTCCTCGTCGTGGTGCTCGCCGCCGCCGCCGATGCGGTGACGTTC 120 consensus_16037#1 TCTTTCCACCTCCTCCTCCTCGTGGTGGTGCTCGCNGCCGCCGCCNATGCGGTGACGTTN 65 *** ******************* *********** ********* ************* consensus_16037#0 ACCATCGTCAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCGACGGC 180 consensus_16037#1 ACNATCGTNAACAAGTGCGGGTACACCGTGTGGCCGGCGGCGCTGCCGTCGGGCNACGN- 124 ** ***** ********************************************* *** consensus_16037#0 AATCAGCTCGACCCGGGGCAGAGCTGGGCCGTGTACGTGCCGGCGGGCACCAAGGGCGCG 240 consensus_16037#1 AATNAGCTCGACCCGGGGNANAGCTGGGCCGTNTACGTGCCGGCGGGCAC-AAGGGCGCG 183 *** ************** * *********** ***************** ********* consensus_16037#0 CGCGTGTGGGGGCGCACGGGCTGCGGCTTCATCTCCGGCGGCAGCCTAGGGCAGTGCCAG 300 consensus_16037#1 CGCTTT------------------------------------------------------ 189 *** * consensus_16037#0 ACGGGCGACTGCGGCGGCACGCTGCGGTGCGCGGCCGTCGGCGCGCCGCCCGTCACGGTG 360 consensus_16037#1 ------------------------------------------------------------ consensus_16037#0 GCCGAGTTCTCGCTGGGCCAGGCGAGCAAGGACGACTACTTCGACATCTCGCTCGTGGAT 420 consensus_16037#1 ------------------------------------------------------------ consensus_16037#0 GGGTTCAACGCGCCAATGGCCATCGTGCCGGCGGCGGCGGGCGGGCGGCGGTGCCCCCGC 480 consensus_16037#1 ------------------------------------------------------------ consensus_16037#0 GGCGGGCCTCGGTGCGCGGCGGAGATCACGCTGCAGTGCCCCGGCGAGCTGCGCGCCAAG 540 consensus_16037#1 ------------------------------------------------------------ consensus_16037#0 GCCGGGTGCAGCAACCCGTGCAGGGGGAACAGCACGTGCGGGCCGACCAAGGACACGGAG 600 consensus_16037#1 ------------------------------------------------------------ consensus_16037#0 TTCTTCAAGAAGCTGTGCCCGGAGACGGTCACCTACGCCCGGGACGGCCAAGGCACCACC 660 consensus_16037#1 ------------------------------------------------------------ consensus_16037#0 TTCACCTGCCCCGCCGGCACCGACTACCAGATCGTCTTCTGCCCATGATGAGCTTGGTCT 720 consensus_16037#1 ------------------------------------------------------------ consensus_16037#0 CGTACAGGGACAGTAATAACTATCTTAGTTCCTGTACTTGTATATGGTGGTAAATAAAAC 780 consensus_16037#1 ------------------------------------------------------------ consensus_16037#0 CTCGCACTGAGTGAATCACTTGTTTGGGATAATGAAAATAAATGGATAAATCTTGTCACT 840 consensus_16037#1 ------------------------------------------------------------ consensus_16037#0 TAAAAAAAAAAAAAAAA 857 consensus_16037#1 ----------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||