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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16137#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 25 consensus length = 927 fasta sequence
[CTGAAGGAGTAAAAAACTCCATTCGCTGCTCTAGGGTTTTTCCCTTGCTCGTCTGCGCCGCCACCTCCTCCACCTTCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG-AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC-GTGTTAC-TGTCAAGAAGAGCAAGAA-TATCC-TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA-TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAGACCCAGGCTGCAG-AGCAGTTCAAGGCGCCGGATCTGAGCAGCATGCTC-TCGAAGCC-GGAGGCGTCGACAGCAGCCCAGGAAGATGATGAGGCCGTCGACGAGACTGGTGTCGAG-CCGAAGGACATCGAGCTGGTGATGACCCAGGCCA-CCGTGTCGAGGTC-CAAGGCGGTGAAGGCACTCAAGGCTGCCAATGGC-GACATCGTCACAGCCATCATGGAACTCACAACTTAGCGAGATTCGCGTTCGATCATTTGATT-CCGT-TTCCATT-CTACCTC-ATCTAGATGGGGGGTTTACATGT-GTTGAGATGTTTGCTTTGTCGTTTGT-GCGCACCAT-T-GTTATT-ATCATGAGCAGTCTTGGGAC-GAT-GTAAGGATAATCTATTGAATGTCTT-GAGTAAGATGGGGGCTTACTGCC-TTTTCCTGCAAAAAAAAAAAAAAAAAAAAGAAAAAA]
[+] EMBL CF292883 [CTGAAGGAGTAAAAAACTCCATTCGCTGCTCTAGGGTTTTTCCCTTGCTCGTCTGCGCCGCCACCTCCTCCACCTTCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAGACCCAGGCTGCAG AGCAGTTCAAGGCGCCGGATCTGAGCA ]
[+] EMBL CF317212 [ TCGCTGCTCTAGGGTTTTTCCCTTGCTCGTCTGCGCCGCCACCTCCTCCACCTTCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGGNAGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAACCCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGC ]
[+] EMBL CF296845 [ TCGCTGCTCTAGGGTTTTTCCCTTGCTCGTCTGCGCCGCCACCTCCTCCACCTTCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAGACCCAGGCTGCAN AGCAGTTCAAGGCGCCGGATCTGAGCAGCATGCTC TCGAAGCC GGGAGCGTCGACAGCAGCCCAG ]
[+] EMBL CF308156 [ TCGCTGCTCTAGGGTTTTTCCCTTGCTCGTCTGCGCCGCCACCTCCTCCACCTTCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAANTATCC TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAGACCCAGGCTG AGNAGCAGTTCAAGGCGCCGGATCTGAGCAGCATGCTC TCGAAGCCGGGAGGCG ]
[+] EMBL AK058906 [ CGCTGCTCTAGGGTTTTTCCCTTGCTCGTCTGCGCCGCCACCTCCTCCACCTTCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAGACCCAGGCTGCAG AGCAGTTCAAGGCGCCGGATCTGAGCAGCATGCTC TCGAAGCC GGAGGCG ]
[+] EMBL CF293854 [ GGTTTTTTCCTTGCTCGTCTGCGCCGCCACCTCCTCCACCTTCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGATGAGGAGCTCCGCGCCCAGATCGGGGAGCAGAAGCTCAACGAGGGAGATTTTCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGGTGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTNTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGAC ]
[+] EMBL OS2044A [ CCCTTGCTCGTCTGCGCCGCCACCTCCTCCACCTTCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAANCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCCNGTGTTAC TGTCAAGAAGNGC ]
[+] EMBL AU172974 [ CCTTGCTCGTCTGCGCCGCCACCTCCTCCACCTTCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAG ]
[+] EMBL AU069043 [ CTCGTCTGCGCCGCCACCTCCTCCACCTTCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCCTTTTTTGTCATCTCC AACCNGATGTCTTCAAGA ]
[+] EMBL CA753515 [ TCTGCGCCGCCACCTCCTCCACCTCCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGAGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAGACCCAGGCTGCAG AGCAGTTCAAGGCGCCGGATCTGAGCAGCATGCTC TCGAAGCC GGAGGCGTCGACAGCAGGCCAGGAAGATGATGAGGCCGTCGACGAGACTGGTGTTGAGCCCGAA GACATCNAGCTGGTGATGACCCANGCCA CCGTG ]
[+] EMBL OSS4881A [ TCTGCGCCGNCACCTCCTCCACCTTCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTACTTGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAAACCGGTTGTCTTCAAGAGCCCTACATCCGACACCTATTGTNATTTTTTGCGAGGCCAAGATCGAGGn ]
[+] EMBL AB110178 [ TCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAGACCCAGGCTGCAG AGCAGTTCAAGGCGCCGGATCTGAGCAGCATGCTC TCGAAGCC GGAGGCG ]
[+] EMBL BP184579 [ TCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAGACCCAGGCTGCAG AGCAGTTCAAGGCGCCGGATCTGAGCAGCATGCTC TCGAAGCC GGAGGCG ]
[+] EMBL BP184894 [ acgaGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAGACCCAGGCTGCAG AGCAGTTCAAGGCGCCGGATCTGAGCAGCATGCTC TCGAAGCC GGAGGCG ]
[+] EMBL CA999966 [ CAACGAGGGAGATGAGCCAGTCGTTGTTGAAGACTTCGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAGACCCAGGCTGCAT AGCAGTTCAAGGCGCCGGATCTGAGCAGCATGCTC TCGAAGCC GGAGGCG ]
[+] EMBL CA999730 [ AACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTG ]
[+] EMBL CB000690 [ AACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAGACCCAGGCTGCAG AGCAGTTCAAGGCGCCGGATCTGAGCAGCATGCTC TCGAAGCC GGAGGCG ]
[+] EMBL CA999121 [ AACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAGACCCAGGCTGCAG AGCAGTTCAAGGCGCCGGATCTGAGCAGCATGCTC TCGAAGCC GGAGGCG ]
[+] EMBL CA999658 [ AACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCA ]
[+] EMBL BI801588 [ GCAGA CCAGGCTCCAG A CAGTTCAA GCCCCGGATCTGA CAGCATGCTCTTCGAA CC GGAGGCGTCGACA CAGCCCAGGAAGATGATGA GCCGTCGACGAGACTGGTGTTGA CCGAAGGACATCGA CTGGTGATGACCCAGGCCA CCGTGTCGAGGTC CAA GCGGTGAA GCACTCAAGGCT CCAATGGC GACATCGTCACAGCCATCATGGAACTCACAACTTAGCGAGATTCGCGTTCGATCATTTGATT CCGT TTCCATT CTACCTC ATCTAGATGGGGGGTTTACATGT GTTGAGATGTCTGCTTTGTCGTTTGT GCGCACCAT T GTTATT ATTATGAGCAGTCTTGGGAC GAT GTAAGGATAATCTATTGAATGTCTT GAGTAAGATGGGGGCTTACTGCC TTTTCCTGCAAAAAAAAAAAAAAAAAAAAGAAAAAA]
[-] EMBL CF293853 [ gtTGCAG AGCAGTTCAAGGCGCCGGATTTGAGCAGCATGCTT TCGAAGCC GGAGGCGTCGACAGCAGCCCAGGAAGATGATGAGCCCGTCGACGAGACTGGTGTCGAG CCGAAGGACATCGAGCTGGTGATGACCCAGGCCC CCGTGTCGAGGTC CAAGGCGGTGAAGGCACTCAAGGCTGCCAATGGC GACATCGTCACAGCCATCATGGAACTCACAACTTAGCGAGATTCGCGTTCGATCATTTGATT CCGT TTCCATT CTCCCTC ATCTAGATGGGGGGTTTACATGT GTTGAGATGTTTGCTTTGTCGTTTGT GCGCCCCAT T GTTATT ATCATGAGCAGTCTTGGGAC GAT GTAAGGATAATCTATTGAATGTCTT GAGTAAGAT GGGGCTTACTGCC TTTTCCTGCAAAAAAAAAAAAAAAAA ]
[-] EMBL CF292884 [ TCAAGGCGCCGGATCTGAGCAGCATGCTC TCGAAGCC GGAGGCGTCGACAGCAGCCCAGGAAGATGGTGAGGCCGTCGACGAGACTGGTGTCGAG CCGAAGGACATCGAGCTGGTGATGACCCAGGCCA CCGTGTCGAGGTC CAAGGCGGTGAAGGCACTCAAGGCTGCCAATGGC GACATCGTCACAGCCATCATGGAACTCACAACTTAGCGAGATTCGCGTTCGATCAAATGATT CCGT TTCCATT AAAAATC ATCTAGATGGGGGGTTTACATGT GTTGAGATGTTTGCTTTGTCGTAAGT GCGCACCAT T GTTATT ATCATGAGCAGTCTTGGGAC GAT GTAAGGATAATCTATTGAATGTCTT GAGTAAGATGGGGGCTAACTGCC TTTTCCTGCAAAAAAAAAAAAAAAAAAcactg ]
[-] EMBL CF296846 [ AGACTGGTGTCGAG CCGAAGGACATCGAGCTGGTGATGACCCAGGCCA CCGTGTCGAGGTC CAAGGCGGTGAAGGCACTCAAGGCTGCCAATGGC GACATCGTCACAGCCATCATGGAACTCACAACTTAGCGAGATTCGCGTTCGATCATTTGATT CCGT TTCCATT CTACCTC ATCTAGACGGGGGGTTTACATGT GTTGAGATGTTTGCTTTGTCGTTTGT GCGCACCAT T GTTATT ATCATGAGCAGTCTTGGGAC GAT GTAAGGATAATCTATTGAATGTCTT GAGTAAGATGGGGGCTTACTGCC TTTTCCTGCAAAAAA ]
[+] EMBL BI805904 [ TGACCCAGGCCACCCGTGTCGAGGTCACAAGGCGGTGAAGGCACTCAAGGCTGCCAATGGCTGATATCGTCACAGCCATCATGGAACTCACAACTTAGCGAGATTCGCGTTCGATCATTTGATTGCCGTGTTCCNTTGCTACCTCTATCTAGATGGGGGGTTTACATGTGGTTGAGATGTTTGCTTTGTCGTTTGTGGCGCACCATGTGGTTATTGATCATGANCAGTCTTGGGACAGATGGTAAGGATAATCTATTGAATGTCTTGGAGTAAGATGGGGGCTTACTNCCATTTTCCTGCCAAAAAAAAAA ]
[+] EMBL AU197594 [ TGCTTTGTCGTTTGT GCGCACCAT T GTTATT ATCATGAGCAGTCTTGGGAC GAT GTAAGGATAATCTATTGAATGTCTT GAGTAAGATGGGGGCTTACTGCC TTTTCCTGCAAAAAAA ]
consensusID : consensus_16137#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 530 fasta sequence
[AGCCCAAGATCGAGACCTGAGCTCCAGCTGCAGACCCAGGCTCCAGACAGTTCAAGGCGCCGGA-TCTGA--CAGCA-TGCTCTCGAAGCCGGAGGCGTCGACA-CAGCCCAGGAAG-ATGATGAGCCCGTCGACGAGA-CTGGTGTTGAGCCGAAGGACATCGAG-CTGGTGATGA-CCCAGGCCA-CCGTGTCGAGGTCCAAGGCGGTGAAGGCACTCAAGGCTGCCAATGGCGACATCGTCACAGCCATCATGGAACTCACAACTTAGCGAGATTCGCGTTCGATCATTTGATTCCGTTTCCA-TTCTACCT-ATCTAGATGGGGGGTTTACA-TGTGTTG-AGATGTCTGCTTTG-TCGTTTGTGCGCACCA-TTGTTATTATTATGAG-CAGTCTTGGGA-CGATGTAAGGATAATCTATTGAATGTCTTGAGTAAGATGGGGGCTTACTGCCTTTTCCTGCACTTGGACAATGTCAGTTGGCTTGAAATGCTTGA-TAGT-GAAGTGAATATACCTGACACCCAAAAATTCGGCAAAAAAAAAA]
[+] EMBL BI803916 [AGCCCAAGATCGAGACCTGAGCTCCAGCTGCAGACCCAGGCTCCAGACAGTTCAAGGCGCCGGA TCTGA CAGCA TGCTCTCGAAGCCGGAGGCGTCGACA CAGCCCAGGAAG ATGATGAGCCCGTCGACGAGA CTGGTGTTGAGCCGAAGGACATCGAG CTGGTGATGA CCCAGGCCA CCGTGTCGAGGTCCAAGGCGGTGAAGGCACTCAAGGCTGCCAATGGCGACATCGTCACAGCCATCATGGAACTCACAACTTAGCGAGATTCGCGTTCGATCATTTGATTCCGTTTCCA TTCTACCT ATCTAGATGGGGGGTTTACA TGTGTTG AGATGTCTGCTTTG TCGTTTGTGCGCACCA TTGTTATTATTATGAG CAGTCTTGGGA CGATGTAAGGATAATCTATTGAATGTCTTGAGTAAGATGGGGGCTTACTGCCTTTTCCTGCACTTGGACAATGTCAGTTGGCTTGAAATGCTTGA TAGT GAAGTGAATATACCTGACACCCAAAAA ]
[+] EMBL BI803031 [ cCCGGATTCTGACCCAGCAGTGCTCTCGAACCCGGAGGCGTCGACAGCAGCCCAGGAAGTATGATGAGCCCGTCGACGAGA CTGGTGTTGAGCCGAAGGACATCGAG CTGGTGATGA CCCAGGCCA CCGTGTCGAGGTCCAAGGCGGTGAAGGCACTCAAGGCTGCCAATGGCGACATCGTCACAGCCATCATGGAACTCACAACTTAGCGAGATTCGCGTTCGATCATTTGATTCCGTTTCCA TTCTACCTCATCTAGATGGGGGGTTTACA TGTGTTG AGATGTCTGCTTTC TCGTTTGTGCGCACCA TTGTTATTATTATGA CAGTCTTGGGA CGATGTAAGGATAATCTATTGAATGTCTTGAGTAAGATGGGGGCTTACTGCCTTTTCCTGCACTTGGACCATGTCAGTTGGCTTGAAATGCTTGACCCCTCGAAGTGAATATACCTGACACCAAAAA ]
[+] EMBL BI799957 [ CGAGACCTGGTGTTGAGCCGAAGGACATCGAGCCTGGTGATGACCCCAGGCCACCCGTGTCGAGGTCCAAGGCGGTGAAGGCACTCAAGGCTGCCAATGGCGACATCGTCACAGCCATCATGGAACTCACAACTTAGCGAGATTCGCGTTCGATCATTTGATTCCGTTTCCACTTCTACCT CACTAGATGGGGGGTTTACACTGTGTTGAAGATGTCTGCTTTGCTCGTTTGTGCGCACCACTTGTTATTATTATGAGCCAGTCTTGGGACCGATGTAAGGATAATCTATTGAATGTCTTGAGTAAGATGGGGGCTTACTGCCTTTTCCTGCACTTGGACAATGTCAGTTGGCTTGAAATGCTTGA TAGT GAAGTGAATATACCTGACACCCCAACTTTCGGCAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_16137#0 CTGAAGGAGTAAAAAACTCCATTCGCTGCTCTAGGGTTTTTCCCTTGCTCGTCTGCGCCG 60
consensus_16137#1 ------------------------------------------------------------
consensus_16137#0 CCACCTCCTCCACCTTCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGGGAAGCAG 120
consensus_16137#1 ------------------------------------------------------------
consensus_16137#0 GAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTC 180
consensus_16137#1 ------------------------------------------------------------
consensus_16137#0 GTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGAT 240
consensus_16137#1 ------------------------------------------------------------
consensus_16137#0 GATGCGGAGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGC 300
consensus_16137#1 ------------------------------------------------------------
consensus_16137#0 AGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCCGTGTTACTGTC 360
consensus_16137#1 ------------------------------------------------------------
consensus_16137#0 AAGAAGAGCAAGAATATCCTTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACA 420
consensus_16137#1 ------------------------------------------------------------
consensus_16137#0 TCCGACACCTATGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAG 480
consensus_16137#1 -------------------------AGCCCAAGATCGAG-ACCTGAGCTC-CAGCTGCAG 33
** *********** ********** *********
consensus_16137#0 ACCCAGGCTGCAGAGCAGTTCAAGGCGCCGGATCTGAGCAGCATGCTCTCGAAGCCGGAG 540
consensus_16137#1 ACCCAGGCTCCAGA-CAGTTCAAGGCGCCGGATCTGA-CAGCATGCTCTCGAAGCCGGAG 91
********* **** ********************** **********************
consensus_16137#0 GCGTCGACAGCAGCCCAGGAAGATGATGAGGCCGTCGACGAGACTGGTGTCGAGCCGAAG 600
consensus_16137#1 GCGTCGACA-CAGCCCAGGAAGATGATGAGCCCGTCGACGAGACTGGTGTTGAGCCGAAG 150
********* ******************** ******************* *********
consensus_16137#0 GACATCGAGCTGGTGATGACCCAGGCCACCGTGTCGAGGTCCAAGGCGGTGAAGGCACTC 660
consensus_16137#1 GACATCGAGCTGGTGATGACCCAGGCCACCGTGTCGAGGTCCAAGGCGGTGAAGGCACTC 210
************************************************************
consensus_16137#0 AAGGCTGCCAATGGCGACATCGTCACAGCCATCATGGAACTCACAACTTAGCGAGATTCG 720
consensus_16137#1 AAGGCTGCCAATGGCGACATCGTCACAGCCATCATGGAACTCACAACTTAGCGAGATTCG 270
************************************************************
consensus_16137#0 CGTTCGATCATTTGATTCCGTTTCCATTCTACCTCATCTAGATGGGGGGTTTACATGTGT 780
consensus_16137#1 CGTTCGATCATTTGATTCCGTTTCCATTCTACCT-ATCTAGATGGGGGGTTTACATGTGT 329
********************************** *************************
consensus_16137#0 TGAGATGTTTGCTTTGTCGTTTGTGCGCACCATTGTTATTATCATGAGCAGTCTTGGGAC 840
consensus_16137#1 TGAGATGTCTGCTTTGTCGTTTGTGCGCACCATTGTTATTATTATGAGCAGTCTTGGGAC 389
******** ********************************* *****************
consensus_16137#0 GATGTAAGGATAATCTATTGAATGTCTTGAGTAAGATGGGGGCTTACTGCCTTTTCCTGC 900
consensus_16137#1 GATGTAAGGATAATCTATTGAATGTCTTGAGTAAGATGGGGGCTTACTGCCTTTTCCTGC 449
************************************************************
consensus_16137#0 AAAAAAAAAAAAAAAAAAAAGAAAAAA--------------------------------- 927
consensus_16137#1 ACTTGGACAATGTCAGTTGGCTTGAAATGCTTGATAGTGAAGTGAATATACCTGACACCC 509
* * ** * ***
consensus_16137#0 ---------------------
consensus_16137#1 AAAAATTCGGCAAAAAAAAAA 530
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||