These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16223#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 23 consensus length = 1806 fasta sequence [AACCCATCCATCACCGCATCTCATCGTCTCCGTCTCCGTCTCCGGCGATGGCCACCAAGCCCCGCCGCCGCTCCCCGTCGCTCTCCTCCTCCTCCTCAACATCCTACTCGCGCTCCCCCGCATCGCC---------CTCCTCCTCCCCGTCGCGCAGCCGCTCCCCTCCCCGCCCCGCGGGG-GGGGCCC-GCT-CGCCTTCG-CCGCCGC-CGCCACCG-CCTCCTCCCAGGAAAGCGTCTCCGCCCCCTGAGTCCACCGTCCTCCATGTTGACCATCTCTCCAGGAACGTCAATGAGGATCATCTCAAGGAGATTTTTGAAAATTATGGTGAAGTCGTCAATGTGGAGCTCTCCATGGATAGGGTGGTCAATCTTCCCCGTGGGTATGGATATGTTGAGTTCAAGAATAGAGCTGATGCAGAGAAGGCTCTTCTTTACTTGGATGGTGGCCAAATTGATGGAAATGTTGTTAAAGTCAGATTCGCGCTTCCACCACAGCAGCAAAGAGCTGCTGCTTCTCCAAAAGCTCTTCACCCTTCACCAAAAAGGGATGTGGTTGATCATAATAAAGTTGGTCCTAGTGCTGAAAAGGCCACCAAACAGCAGCCCAGGAAAC---CATCTCCTCAAAGAAAGCCAGCTCCATCTCCAAGAAGGCGATCTCCTCCAAGTCGAA-GAGTTG--AATCACCTAGGTGTAGGCCTGATTCTCCTCCAATTCGCCGTCGAACAGCTCCTTCTCCAATCAGGCATGGTGGAACTCCTAGCAGGAGACCAGGATCCCCAATCAGAAGGCGCTCACCCTCTCCGCCCCCTCGAAGACTAAGATCACCAAGGCACCTATCACCAAGAAGAGATCGGGGCAGTCCAATCCGCAGGCGCTCCCCATTGCCTCGTAGAAGGCTGACTCCTCCAAGGAGGATGTGGAGTCCTCCCAGAAGACCACAGTCACTTCGCCATCGCAGTAGATCTCCCATTCACCGACCAATTCGCTCCCCTTCCAGATCGATTTCTCCACGCAGGGGTCGGGGTCCTCCTGTGCGCCGTGGACGGTCATCCTCATCGTATTCTGATTCACCTACTCCTCCAAGAAGGGGACCAAGAAGGGTGCTCAGAAGTCGCAGTCCTAGAAGGCCTTTAAGAGGAAGAAGTGCCTCTAGCTACAGCCGTAGTAGCAGCAGCTCAGGTTCCCCTATCCGCAATTAAAACTCTTGGCATGGCATGGCATGGAATGGAATGGTGTGGTGATCCTGGTAGGTAAATCTTTCCGTCTCGTCCCTTTTTATCGCTGATTTTGTGTCTTTTT-GTCTTTGCTGCTGCTGTTTTTGTTGTCAAGCTTTGGTTCTTCGTGTGAGTTTGGGGCTTTGCGCGATGGTGCATGCGTTCCCTACGATCAAGCTGGCACTGGAACATTTAGATATTGCTGGAAGTTAAACATTTTCAAGCTTCTTGGAGGCTCTGTCTGAACTCTGGATTTCTCCTCTTGGAGGGAGCGATGACTTATGCATGTCAATGCTGCAGTAAATAAAGTGGAGTACATTAGTATTCTGTAGTAGCCTATTAAAGCACAGATTTCTGTGGGTTGGGAATCCAGGAGCACCAACATTTACTGGTGAAATTGAATTCACCACTCACTTGTCGAACCTGAAGGCAAGATTGACTTGACAATTTCTCTTTGTAATGGTTATGTTTTGTTATCTACGTGGAGTTATTTTGGACATCTGAACCTTTAGATTCCAGTGGAGATGATATCATCTCCAAAAAGATCTTGTCATGGAGTTGACTATCAATGTTTTGGCAGGCAGGAAAAAAATGAAATTAAATT] [+] EMBL AK063761 [AACCCATCCATCACCGCATCTCATCGTCTCCGTCTCCGTCTCCGGCGATGGCCACCAAGCCCCGCCGCCGCTCCCCGTCGCTCTCCTCCTCCTCCTCAACATCCTACTCGCGCTCCCCCGCATCGCC CTCCTCCTCCCCGTCGCGCAGCCGCTCCCCTCCCCGCCCCGCGGGG GGGGCCC GCT CGCCTTCG CCGCCGC CGCCACCG CCTCCTCCCAGGAAAGCGTCTCCGCCCCCTGAGTCCACCGTCCTCCATGTTGACCATCTCTCCAGGAACGTCAATGAGGATCATCTCAAGGAGATTTTTGAAAATTATGGTGAAGTCGTCAATGTGGAGCTCTCCATGGATAGGGTGGTCAATCTTCCCCGTGGGTATGGATATGTTGAGTTCAAGAATAGAGCTGATGCAGAGAAGGCTCTTCTTTACTTGGATGGTGGCCAAATTGATGGAAATGTTGTTAAAGTCAGATTCGCGCTTCCACCACAGCAGCAAAGAGCTGCTGCTTCTCCAAAAGCTCTTCACCCTTCACCAAAAAGGGATGTGGTTGATCATAATAAAGTTGGTCCTAGTGCTGAAAAGGCCACCAAACAGCAGCCCAGGAAACCAGCATCTCCTCAAAGAAAGCCAGCTCCATCTCCAAGAAGGCGATCTCCTCCAAGTCGAA GAGTTG AATCACCTAGGTGTAGGCCTGATTCTCCTCCAATTCGCCGTCGAACAGCTCCTTCTCCAATCAGGCATGGTGGAACTCCTAGCAGGAGACCAGGATCCCCAATCAGAAGGCGCTCACCCTCTCCGCCCCCTCGAAGACTAAGATCACCAAGGCACCTATCACCAAGAAGAGATCGGGGCAGTCCAATCCGCAGGCGCTCCCCATTGCCTCGTAGAAGGCTGACTCCTCCAAGGAGGATGTGGAGTCCTCCCAGAAGACCACAGTCACTTCGCCATCGCAGTAGATCTCCCATTCACCGACCAATTCGCTCCCCTTCCAGATCGATTTCTCCACGCAGGGGTCGGGGTCCTCCTGTGCGCCGTGGACGGTCATCCTCATCGTATTCTGATTCACCTACTCCTCCAAGAAGGGGACCAAGAAGGGTGCTCAGAAGTCGCAGTCCTAGAAGGCCTTTAAGAGGAAGAAGTGCCTCTAGCTACAGCCGTAGTAGCAGCAGCTCAGGTTCCCCTATCCGCAATTAAAACTCTTGGCATGGCATGGCATGGAATGGAATGGTGTGGTGATCCTGGTAGGTAAATCTTTCCGTCTCGTCCCTTTTTATCGCTGATTTTGTGTCTTTTT GTCTTTGCTGCTGCTGTTTTTGTTGTCAAGCTTTGGTTCTTCGTGTGAGTTTGGGGCTTTGCGCGATGGTGCATGCGTTCCCTACGATCAAGCTGGCACTGGAACATTTAGATATTGCTGGAAGTTAAACATTTTCAAGCTTCTTGGAGGCTCTGTCTGAACTCTGGATTTCTCCTCTTGGAGGGAGCGATGACTTATGCATGTCAATGCTGCAGTAAATAAAGTGGAGTACATTAGTATTCTGTAGTAGCCTATTAAAGCACAGATTTCTGTGGGTTGGGAATCCAGGAGCACCAACATTTACTGGTGAAATTGAATTCACCACTCACTTGTCGAACCTGAAGGCAAGATTGACTTGACAATTTCTCTTTGTAATGGTTATGTTTTGTTATCTACGTGGAGTTATT ] [+] EMBL CB671002 [ TCATCGTCTCCGTCTCCGTCTCCGGCGATGGCCACCAAGCCCCGCCGCCGCTCCCCGTCGCTCTCCTCCTCCTCCTCAACATCCTACTCGCGCTCCCCCGCATCGCC CTCCTCCTCCCCGTCGCGCAGCCGCTCCCCTCCCCGCCCCGCGGGG GGGGCCC GCT CGCCTTCG CCGCCGC CGCCACCG CCTCCTCCCAGGAAAGCGTCTCCGCCCCCTGAGTCCACCGTCCTCCATGTTGACCATCTCTCCAGGAACGTCAATGAGGATCATCTCAAGGAGATTTTTGAAAATTATGGTGAAGTCGTCAATGTGGAGCTCTCCATGGATAGGGTGGTCAATCTTCCCCGTGGGTATGGATATGTTGAGTTCAAGAATAGAGCTGATGCAGAGAAGGCTCTTCTTTACTTGGATGGTGGCCAAATTGATGGAAATGTTGTTAAAGTCAGATTCGCGCTTCCACCACAGCAGCAAAGAGCTGCTGCTTCTCCAAAAGCTCTTCACCCTTCACCAAAAAGGGATGTGGTTGATCATAATAAAGTTGGTCCTAGTGCTGAAAAGGCCACCAAACAGCAGCCCAGGAAAC CATCTCCTCAAAGAAAGCCAGCTCCATCTCCAAGAAGGCGATCTCCTCCAAGTCGAA GAGTTG AATCACCTANGTGTAGGCCTGATTCTCCTCCAATTCGCCGTCGAACAGCTCCTTCTCCAATCAGGCATGGTGGAACTCCTAGCA ] [+] EMBL CB674136 [ CATCGTCTCCGTCTCCGTCTCCGGCGATGGCCACCAAGCCCCGCCGCCGCTCCCCGTCGCTCTCCTCCTCCTCCTCAACATCCTACTCGCGCTCCCCCGCATCGCC CTCCTCCTCCCCGTCGCGCAGCCGCTCCCCTCCCCGCCCCGCGGGG GGGGCCC GCT CGCCTTCG CCGCCGC CGCCACCG CCTCCTCCCAGGAAAGCGTCTCCGCCCCCTGAGTCCACCGTCCTCCATGTTGACCATCTCTCCAGGAACGTCAATGAGGATCATCTCAAGGAGATTTTTGAAAATTATGGTGAAGTCGTCAATGTGGAGCTCTCCATGGATAGGGTGGTCAATCTTCCCCGTGGGTATGGATATGTTGAGTTCAAGAATAGAGCTGATGCAGAGAAGGCTCTTCTTTACTTGGATGGTGGCCAAATTGATGGAAATGTTGTTAAAGTCAGATTCGCGCTTCCACCACAGCAGCAAAGAGCTGCTGCTTCTCCAAAAGCTCTTCACCCTTCACCAAAAAGGGATGTGGTTGATCATAATAAAGTTGGTCCTAGTGCTGAAAAGGCCACCAAACAGCAGCCCAGGAAACCAGCATCTCCTCAAAGAAAGCCAGCTCCATCTCCAAGAAGGCGATCTCCTCCAAGTCGAA GAGTTG AATCACCTAGGTGTAGGCCTGATTCTCCTCCAATTCGCCGTCGAACAGCTCCTTCTCCAATCAGGCATGGTGGAACTCCTAGCAGGAGACCAGGATCCCCAATCAGAAAGCGCTCACCCTCT ] [+] EMBL CB629506 [ ATCGCCTCCGTCTCCGTCTCCGGCGATGGCCACCAAGCCCCGCCGCCGCTCCCCGTCGCTCCCCTCCTCCTCCTCAACATCCTACTCGCGCTCCCCCGCATCGCCCTCCTCCTTCTCCTCCTCCCCGTCGCGCAGCCGCTCCCTTCCCCGCCCCGCGGGG GGGGCCC GCT CGCCTTCG CCGCCGC CGCCACCG CCTCCTCCCAGGAAAGCGTCTCCGCCCCCTGAGTCCACCGTCCTCCATGTTGACCATCTCTCCAGGAACGTCAATGAGGATCATCTCAAGGAGATTTTTGAAAATTATGGTGAAGTCGTCAATGTGGAGCTCTCCATGGATAGGGTGGTCAATCTTCCCCGTGGGTATGGATATGTTGAGTTCAAGAATAGAGCTGATGCAGAGAAGGCTCTTCTTTACTTGGATGGTGGCCAAATTGATGGAAATGTTGTTAAAGTCAGATTCGCGCTTCCACCACAGCAGCAAAGAGCTGCTGCTTCTCCAAAAGCTCTTCACCCTTCACCAAAAAGGGATGTGGTTGATCATAATAAAGTTGGTCCTAGTGCTGAAAAGGCCACCAAACAGCAGCCCAGGAAACCAGCATCTCCTCAAAGAAAGCCAGCTCCATCTCCAAGAAGGCGATCTCCTCCAAGTCGAA GAGTTG AATCACCTAGGCGTAGGCCTGATTCTCCTCCAATTCGCCGACGAACAGCTCCCTCTCCAATCAGGCGTGGTGG ] [+] EMBL CB629536 [ ATCGTCCCCGACTCCGTCTCCGGCGATGGCCACCAAGCCCCGCCGCCGCTCCCCGTCGCTCCCCTCCTCCTCCTCAACATCCTACTCGCGCTCCCCCGCATCGCCCTCCTCCTTCTCCTCCTCCCCGTCGCGCAGCCGCTCCCTTCCCCGCGCCGCGGGGAGGGGCCCAGCTGCGCCTTCGTCCGCCGCACGCCACCGACGTCCTCCCAGGAAAGCGTCTCCGCCCCCTGAGTCCACCGTCCTCCATGTTGACCATCTCTCCAGGAACGTCAATGAGGATCATCTCAAGGAGATTTTTGAAAATTATGGTGAAGTCGTCAATGTGGAGCTCTCCATGGATAGGGTGGTCAATCTTCCCCGTGGGTATGGATATGTTGAGTTCAAGAATAAAGCTGATGCAGAGAAGGCTCTTCTTTACTTGGATGGTGGCCAAATTGATGGAAATGTTGGTAAAGTCAGATTCGCGCTTCCACCACAGCAGCAAAGAGCTGATGCTTCTCCAAAAGCTCTTCACCCTTCACCAAAAAGGGATGTGGTTGATCATAATAGAGTTGGACCTAGTGCTGAAAATGCCACCAAACAGCAGCCCAGGAAACCAGCATCTCCTCAAAGAAAGCCAGCTCCATCTCCAAGAAGGC ] [+] EMBL CB668007 [ TCCGCCTCCGTCTCCGGCGATGGCCACCAAGCCCCGCCGCCGCTCCCCGTCGCTCTCCTCCTCCTCCTCAACATCCTACTCGCGCTCCCCCGCATCGCC CTCCTCCTCCCCGTCGCGCAGCCGCTCCCCTCCCCGCCCCGCGGGG GGGGCCC GCT CGCCTTCG CCGCCGC CGCCACCG CCTCCTCCCAGGAAAGCGTCTCCGCCCCCTGAGTCCACCGTCCTCCATGTTGACCATCTCTCCAGGAACGTCAATGAGGATCATCTCAAGGAGATTTTTGAAAATTATGGTGAAGTCGTCAATGTGGAGCTCTCCATGGATAGGGTGGTCAATCTTCCCCGTGGGTATGGATATGTTGAGTTCAAGAATAGAGCTGATGCAGAGAAGGCTCTTCTTTACTTGGATGGTGGCCAAATTGATGGAAATGTTGTTAAAGTCAGATTCGCGCTTCCACCACAGCAGCAAAGAGCTGCTGCTTCTCCAAAAGCTCTTCACCCTTCACCAAAAAGGGATGTGGTTGATCATAATAAAGATGGTCCTAGTGCTGAAAAGGCCACCAGACAGCAGCGCATGAAACCAGCATCTCCTCAAAGAAAGCCAGCTCCATCTCCAAGAAGGCGATCTCCTCCAAGTCGAA GAGT ] [+] EMBL CB669745 [ TCCGTCTCCGTCTCCGGCGATGGCCACCAAGCCCCGCCGCCGCTCCCCGTCGCTCTCCTCCTCCTCCTCAACATCCTACTCGCGCTCCCCCGCATCGCC CTCCTCCTCCCCGTCGCGCAGCCGCTCCCCTCCCCGCCCCGCGGGG GGGGCCC GCT CGCCTTCG CCGCCGC CGCCACCG CCTCCTCCCAGGAAAGCGTCTCCGCCCCCTGAGTCCACCGACCTCCATGTTGACCATCTCTCCAGGAACGTCAATGAGGATCATCTCAAGGAGATTTTTGAAAATTATGGTGAAGTCGTCAATGTGGAGCTCTCCATGGATAGGGTGGTCAATCTTCCCCGTGGGTATGGATATGTTGAGTTCAAGAATAGAGCTGATGCAGAGAAAGCTCTTCTTTACTTGGATGGTGGCCAAATTGATGGAAATGATGTAAAAGTCAGATTCGCGCTTCCACCACAGCAGCAAAGAGCTGCTGCTTCTCCAAAAGCTCTTCACCCTTCACCAAAAAGGGATGTGGGTGATCATAATAAAGTTGGTCCTAGTGCTGAAAAGGCCACCGAACAGCAGGACAGGAAAC CATCTCCTCAAAGAAAGCCAGCTCCATCTCCAGGAAGGCGATCTCCTCCAAGTCGAA GAGTTG ] [+] EMBL CB671782 [ GTCTCCCTTTCCGGCGATGGCCACCAAGCCCCGCCGCCGCTCCCCGTCGCTCTCCTCCTCCTCCTCAACATCCTACTCGCGCTCCCCCGCATCGCC CTCCTCCTCCCCGTCGCGCAGCCGCTCCCCTCCCCGCCCCGCGGGG GGGGCCC GCT CGCCTTCG CCGCCGC CGCCACCG CCTCCTCCCAGGAAAGCGTCTCCGCCCCCTGAGTCCACCGTCCTCCATGTTGACCATCTCTCCAGGAACGTCAATGAGGATCATCTCAAGGAGATTTTTGAAAATTATGGTGAAGTCGTCAATGTGGAGCTCTCCATGGATAGGGTGGTCAATCTTCCCCGTGGGTATGGATATGTTGAGTTCAAGAATAGAGCTGATGCAGAGAAGGCTCTTCTTTACTTGGATGGTGGCCAAATTGATGGAAATGTTGTTAAAGTCAGATTCGCGCTTCCACCACAGCAGCAAAGAGCTGCTGCTTCTCCAAAAGCTCTTCACCCTTCACCAAAAAGGGATGTGGTTGATCATAATAAAGTTGGTCCTAGTGCTGAAAAGGCCACCAAACAGCAGCCCAGGAAAC CATCTCCTCAAAGAAAGCCAGCTCCATCTCCAAGAAGGCGATCTCCTCCAAGTCGAA GAGTTG AATCACCTAGGTGTAGGCCTGATTCTCCTCCAATTCGCCGTCGAACAGCTCCTTCTCCAATCAGGCATGGTGGAACTCCTAGCAGGAGACCAGGATCCCCAATCAGAAAGCGCTCACCCTCTCCGCCCCCTCGGAGACTAAGATCACCAAG ] [+] EMBL CB664371 [ CGGCGATGGCCACCAAGCCCCGCCGCCGCTCCCCGTCGCTCTCCTCCTCCTCCTCAACATCCTACTCGCGCTCCCCCGCATCGCC CTCCTCCTCCCCGTCGCGCAGCCGCTCCCCTCCCCGCCCCGCGGGG GGGGCCC GCT CGCCTTCG CCGCCGC CGCCACCG CCTCCTCCCAGGAAAGCGTCTCCGCCCCCTGAGTCCACCGTCCTCCATGGTGACCATCTCTCCAGGAACGTCAATGAGGATCATCTCAAGGAGATTTTTGAAAATTATGGAGAAGTCGGCAATGTGGAGCTCTCCATGGATAGGGAGGTCAATCTTCCCCGTGGGTATGGATATGTTGAGTTCAAAAATAGAGCTGATGCAGAGAAGGCTCTTCTTTACTTGGATGGTGGCCAAATTGATGGAAATGTTGGTAAAATCAGATTCGCGCTTCCACCACAGAAGCAAAGAGCTGCTGCTTCTCGAAAAGCTCTTCACCCATCACCAAAAAGGGATGTGGGAGATCATAATAAAGTTGGTCCTAGTGCTGAAAAAGGCACCAAACAGCAGCCCAGGAAAC CATCTCCTCAAAGATAGCCAGCTCCATCTCGGAGAACGTGATCTCCTCCAAGGCGAA TAGTAG AATCACCTAGGTGTACGCCT ] [+] EMBL CB627929 [ TGGCCACCAAGCCCCGCCGCCGCTCCCCGTCGCTCCCCTCCTCCTCCTCAACATCCTACTCGCGCTCCCCCGCATCGCCCTCCTCCTTCTCCTCCTCCCCGTCGCGCAGCCGCTCCCTTCCCCGCCCCGCGGGG GGGGCCC GCT CGCCTTCG CCGCCGC CGCCACCG CCTCCTCCCAGGAAAGCGTCTCCGCCCCCTGAGTCCACCGTCCTCCATGTTGACCATCTCTCCAGGAACGTCAATGAGGATCATCTCAAGGAGATTTTTGAAAATTATGGTGAAGTCGTCAATGTGGAGCTCTCCATGGATAGGGTGGTCAATCTTCCCCGTGGGTATGGATATGTTGAGTTCAAGAATAGAGCTGATGCAGAGAAGGCTCTTCTTTACTTGGATGGTGGCCAAATTGATGGAAATGTTGTTAAAGTCAGATTCGCGCTTCCACCACAGCAGCAAAGAGCTGCTGCTTCTCCAAAAGCTCTTCACCCTTCACCAAAAAGGGATGTGGTTGATCATAATAAAGTTGGTCCTAGTGCTGAAAAGGCCACCAAACAGCAGCCCAGGAAAC CATCTCCTCAAAGAAAGCCAGCTCCATCTCCAAGAAGGCGATCTCCTCCAAGTCGAA GAGTTG AATCACCTAGGCGTAGGCCTGATTCTCCTCCAATTCGCCGTCGAACAGCTCCCTCTCCAATCAGGCGTGGTGGAACTCCTAGCAGGAGACCAGGATCCCCAATCAGAAGGCGCTCACCCTCTCCGCCCCCTCGAAGACTAAGATCACCAAAGCg ] [+] EMBL CB657696 [ CCCAGGAAAGCGTCTCCGCCCCCTGAGTCCACCGTCCTCCATGTTGACCATCTCTCCAGGAACGTCAATGAGGATCATCTCAAGGAGATTTTTGAAAATTATGGTGAAGTCGTCAATGTGGAGCTCTCCATGGATAGGGTGGTCAATCTTCCCCGTGGGTATGGATATGTTGAGTTCAAGAATAGAGCTGATGCAGAGAAGGCTCTTCTTTACTTGGATGGTGGCCAAATTGATGGAAATGTTGTTAAAGTCAGATTCGCGCTTCCACCACAGCAGCAAAGAGCTGCTGCTTCTCCAAAAGCTCTTCACCCTTCACCAAAAAGGGATGTGGTTAATCATAATAAAGTTGGTCCTAGTGCTGAAAAGGCCACCAAACAGCAGCCCAGGAAAC CATCTCCTCAAAGAAAGCCAGCTCCATCTCCAAGAAGGCGATCTCCTCCAAGTCGAA GAGTTG AATCACCTAGGTGTAGGCCTGATTCTCCTCCAATTCGCCGTCGAACAGCTCCTTCTCCAATCAGGCATGGTGGAACTCCTAGCAGGAGACCAGGATCCCCAATCAGAAGGCGCTCACCCTCTCCGCCCCCTCGAAGACTAAGATCACCAAGGCACCTATCACCAAGAAGAGATCGGGGCAGTCCAATCCGCAGGCGCTCCCCATTGCCTCGTAGAAGGCTGACTCCTCCAAGGAGGATGTGGAGTCCTCCCAGAAGACCACAGTCACTTCGCCATCGCAGTAGATCTCCCATTCACCGACCAATT ] [+] EMBL CB657653 [ CCCAGGAAAGCGTCTCCGCCCCCTGAGTCCACCGTCCTCCATGTTGACCATCTCTCCAGGAACGTCAATGAGGATCATCTCAAGGAGATTTTTGAAAATTATGGTGAAGTCGTCAATGTGGAGCTCTCCATGGATAGGGTGGTCAATCTTCCCCGTGGGTATGGATATGTTGAGTTCAAGAATAGAGCTGATGCAGAGAAGGCTCTTCTTTACTTGGATGGTGGCCAAATTGATGGAAATGTTGTTAAAGTCAGATTCGCGCTTCCACCACAGCAGCAAAGAGCTGCTGCTTCTCCAAAAGCTCTTCACCCTTCACCAAAAAGGGATGTGGTTAATCATAATAAAGTTGGTCCTAGTGCTGAAAAGGCCACCAAACAGCAGCCCAGGAAAC CATCTCCTCAAAGAAAGCCAGCTCCATCTCCAAGAAGGCGATCTCCTCCAAGTCGAA GAGTTG AATCACCTAGGTGTAGGCCTGATTCTCCTCCAATTCGCCGTCGAACAGCTCCTTCTCCAATCAGGCATGGTGGAACTCCTAGCAGGAGACCAGGATCCCCAATCAGAAGGCGCTCACCCTCTCCGCCCCCTCGAAGACTAAGATCACCAAGGCACCTATCACCAAGAAGAGATCGGGGCAGTCCAATCCGCAGGCGCTCCCCATTGCCTCGTAGAAGGCTGACTCCTCCAAGGAGGATGTGGAGTCCTCCCAGAAGACCACAGTCACTTCGCCATCGCAGTAGATCTCCCATTCACCGACCAATTCGCTCCCCTTCCAGATCGATTTCTCCACGCAGGGGTCGGGGTC ] [+] EMBL CF277496 [ GAAGGAGTAGAAAATCACCTAGGTGTAGGCCTGATTCTCCTCCAATTCGCCGTCGAACAGCTCCTTCTCCAATCAGGCATGGTGGAACTCCTAGCAGGAGACCAGGATCCCCAATCAGAAGGCGCTCGCCCTCTCCGCCCCCTCGAAGACTAAGATCACCAAGGCACCTATCACCAAGAAGAGATCGGGGCAGTCCAATCCGCAGGCGCTCCCCATTGCCTCGTAGAAGGCTGACTCCTCCAAGGAGGATGTGGAGTCCTCCCAGAAGACCACAGTCACTTCGCCATCGCAGTAGATCTCCCATTCACCGACCAATTCGCTCCCCTTCCAGATCGATTTCTCCACGCAGGGGTCGGGGTCCTCCTGTGCGCCGTGGACGGTCATCCTCATCGTATTCTGATTCACCTACTCCTCCAAGAAGGGGACCAAGAAGGGTGCTCAGAAGTCGCAGTCCTAGAAGGCCTTTAAGAGGAAGAAGTGCCTCTAGCTACAGCCGTAGTAGCAGCAGCTCAGGTTCCCCTATCCGCAATTAAAACTCTTGGCATGGCATGGCATG ] [-] EMBL CB664372 [ ATGTGGAGTCCTCCCAGAAGACCACAGTCACTTCGCCATCGCAGTAGATCTCCCATTCACCGACCAATTCGCTCCCCTTCCAGATCGATTTCTCCACGCAGGGGTCGGGGTCCTCCTGTGCGCCGTGGACGGTCATCCTCATCGTATTCTGATTCACCTACTCCTCCAAGAAGGGGACCAAGAAGGGTGCTCAGAAGTCGCAGTCCTAGAAGGCCTTTAAGAGGAAGAAGTGCCTCTAGCTACAGCCGTAGTAGCAGCAGCTCAGGTTCCCCTATCCGCAATTAAAACTCTTGGCATGGCATGGCATGGAATGGAATGGTGTGGTGATCCTGGTAGGTAAATCTTTCCGTCTCGTCCCTTTTTATCGCTGATTTTGTGTCTTTTT GTCTTTGCTGCTGCTGTTTTTGTTGTCAAGCTTTGGTTCTTCGTGTGAGTTTGGGGCTTTGCGCGATGGTGCATGCGTTCCCTACGATCAAGCTGGCACTGGAACATTTAGATATTGCTGGAAGTTAAACATTTTCAAGCTTCTTGGAGGCTCTGTCTGAACTCTGGATTTCTCCTCTTGGAGGGAGCGATGACTTATGCATGTCAATGCTGCAGTAAATAAAGTGGAGTACATTAGTATTCTGTAGTAGCCTATTAAAGCACAGATTTCTGTGGGTTGGGAATCCAGGAGCACCAACATTTACTGGTGAAATTGAATTCACCACTCACTTGTCGAACCTGAAGGCAAGATTGACTTGACAATTTCTCTTTGTAATGGTTATGTTTTGTTATCTACGTGGAGTTATTTgg ] [-] EMBL CB664373 [ TGGAGTCCTCCCAGAAGACCACAGTCACTTCGCCATCGCAGTAGATCTCCCATTCACCGACCAATTCGCTCCCCTTCCAGATCGATTTCTCCACGCAGGGGTCGGGGTCCTCCTGTGCGCCGTGGACGGTCATCCTCATCGTATTCTGATTCACCTACTCCTCCAAGAAGGGGACCAAGAAGGGTGCTCAGAAGTCGCAGTCCTAGAAGGCCTTTAAGAGGAAGAAGTGCCTCTAGCTACAGCCGTAGTAGCAGCAGCTCAGGTTCCCCTATCCGCAATTAAAACTCTTGGCATGGCATGGCATGGAATGGAATGGTGTGGTGATCCTGGTAGGTAAATCTTTCCGTCTCGTCCCTTTTTATCGCTGATTTTGTGTCTTTTT GTCTTTGCTGCTGCTGTTTTTGTTGTCAAGCTTTGGTTCTTCGTGTGAGTTTGGGGCTTTGCGCGATGGTGCATGCGTTCCCTACGATCAAGCTGGCACTGGAACATTTAGATATTGCTGGAAGTTAAACATTTTCAAGCTTCTTGGAGGCTCTGTCTGAACTCTGGATTTCTCCTCTTGGAGGGAGCGATGACTTATGCATGTCAATGCTGCAGTAAATAAAGTGGAGTACATTAGTATTCTGTAGTAGCCTATTAAAGCACAGATTTCTGTGGGTTGGGAATCCAGGAGCACCAACATTTACTGGTGAAATTGAATTCACCACTCACTTGTCGAACCTGAAGGCAAGATTGACTTGACAATTTCTCTTTGTAATGGTTATGTTTTGTTATCTACGTGGAGTT ] [-] EMBL CB657697 [ CAGTCACTTCGCCATCGCAGTAGATCTCCCATTCACCGACCAATTCGCTCCCCTTCCAGATCGATTTCTCCACGCAGGGGTCGGGGTCCTCCTGTGCGCCGTGGACGGTCATCCTCATCGTATTCTGATTCACCTACTCCTCCAAGAAGGGGACCAAGAAGGGTGCTCAGAAGTCGCAGTCCTAGAAGGCCTTTAAGAGGAAGAAGTGCCTCTAGCTACAGCCGTAGTAGCAGCAGCTCAGGTTCCCCTATCCGCAATTAAAACTCTTGGCATGGCATGGCATGGAATGGAATGGTGTGGTGATCCTGGTAGGTAAATCTTTCCGTCTCGTCCCTTTTTATCGCTGATTTTGTGTCTTTTT GTCTTTGCTGCTGCTGTTTTTGTTGTCAAGCTTTGGTTCTTCGTGTGAGTTTGGGGCTTTGCGCGATGGTGCATGCGTTCCCTACGATCAAGCTGGCACTGGAACATTTAGATATTGCTGGAAGTTAAACATTTTCAAGCTTCTTGGAGGCTCTGTCTGAACTCTGGATTTCTCCTCTTGGAGGGAGCGATGACTTATGCATGTCAATGCTGCAGTAAATAAAGTGGAGTACATTAGTATTCTGTAGTAGCCTATTAAAGCACAGATTTCTGTGGGTTGGGAATCCAGGAGCACCAACATTTACTGGTGAAATTGAATTCACCACTCACTTGTCGAACCTGAAGGCAAGATTGACTTGACAATTTCTCTTTGTAATGGTTATGTTTTGTTATCTACGTGGAGTTATTTTGGAC ] [-] EMBL CB669746 [ CCAATTCGCTCCCCTTCCAGATCGATTTCTCCACGCAGGGGTCGGGGTCCTCCTGTGCGCCGTGGACGGTCATCCTCATCGTATTCTGATTCACCTACTCCTCCAAGAAGGGGACCAAGAAGGGTGCTCAGAAGTCGCAGTCCTAGAAGGCCTTTAAGAGGAAGAAGTGCCTCTAGCTACAGCCGTAGTAGCAGCAGCTCAGGTTCCCCTATCCGCAATTAAAACTCTTGGCATGGCATGGCATGGAATGGAATGGTGTGGTGATCCTGGTAGGTAAATCTTTCCGTCTCGTCCCTTTTTATCGCTGATTTTGTGTCTTTTT GTCTTTGCTGCTGCTGTTTTTGTTGTCAAGCTTTGGTTCTTCGTGTGAGTTTGGGGCTTTGCGCGATGGTGCATGCGTTCCCTACGATCAAGCTGGCACTGGAACATTTAGATATTGCTGGAAGTTAAACATTTTCAAGCTTCTTGGAGGCTCTGTCTGAACTCTGGATTTCTCCTCTTGGAGGGAGCGATGACTTATGCATGTCAATGCTGCAGTAAATAAAGTGGAGTACATTAGTATTCTGTAGTAGCCTATTAAAGCACAGATTTCTGTGGGTTGGGAATCCAGGAGCACCAACATTTACTGGTGAAATTGAATTCACCACTCACTTGTCGAACCTGAAGGCAAGATTGACTTGACAATTTCTCTTTGTAAAGGGGATGTTTTGTTATCTACGTGGAGTTATTTTGG ] [-] EMBL CB671003 [ CTTCCAGATCGATTTCTCCACGCAGGGGTCGGGGTCCTCCTGTGCGCCGTGGACGGTCATCCTCATCGTATTTTGATTCACCTACTCCTCCAAGAAGGGGACCAAGAAGGGTGCTCAGAAGTCGCAGTCCTAGAAGGCCTTTAAGAGGAAGAAGTGCCTCTAGCTACAGCCGTAGTAGCAGCAGCTCAGGTTCCCCTATCCGCAATTAAAACTCTTGGCATGGCATGGCATGGAATGGAATGGTGTGGTGATCCTGGTAGGTAAATCTTTCCGTCTCGTCCCTTTTTATCGCTGATTTTGTGTCTTTTT GTCTTTGCTGCTGCTGTTTTTGTTGTCAAGCTTTGGTTCTTCGTGTGAGTTTGGGGCTTTGCGCGATGGTGCATGCGTTCCCTACGATCAAGCTGGCACTGGAACATTTAGATATTGCTGGAAGTTAAACATTTTCAAGCTTCTTGGAGGCTCTGTTTGAACTCTGGATTTCTCCTCTTGGAGGGAGCGATGACTTATGCATGTCAATGCTGCAGTAAATAAAGTGGAGTACATTAGTATTTTGTAGTAGCCTATTAAAGCACAGATTTTTGTGGGTTGGGAATCCAGGAGCCCCAACATTTACTGGTGAAATTGAATTCACCCCTCCCTTGTCGAACCTGAAGGCAAGATTGACTTGACAATTTCTCTTTGTAATGGTTATGTTTTGTTATTTACAAGGAGTTATTTT ] [-] EMBL CB671783 [ ATCCTCATCGTATTCTGATTCACCTACTCCTCCAAGAAGGGGACCAAGAAGGGTGCTCAGAAGTCGCAGTCCTAGAAGGCCTTTAAGAGGAAGAAGTGCCTCTAGCTACAGCCGTAGTAGCAGCAGCTCAGGTTCCCCTATCCGCAATTAAAACTCTTGGCATGGCATGGCATGGAATGGAATGGTGTGGTGATCCTGGTAGGTAAATCTTTCCGTCTCGTCCCTTTTTATCGCTGATTTTGTGTCTTTTT GTCTTTGCTGCTGCTGTTTTTGTTGTCAAGCTTTGGTTCTTCGTGTGAGTTTGGGGCTTTGCGCGATGGTGCATGCGTTCCCTACGATCAAGCTGGCACTGGAACATTTAGATATTGCTGGAAGTTAAACATTTTCAAGCTTCTTGGAGGCTCTGTCTGAACTCTGGATTTCTCCTCTTGGAGGGAGCGATGACTTATGCATGTCAATGCTGCAGTAAATAAAGTGGAGTACATTAGTATTCTGTAGTAGCCTATTAAAGCACAGATTTCTGTGGGTTGGGAATCCAGGAGCACCAACATTTACTGGTGAAATTGAATTCACCACTCACTTGTCGAACCTGAAGGCAAGATTGACTTGACAATTTCTCTTTGTAATGGTTATGTTTTGTTATCTACGTGGAGTT ] [-] EMBL CB678115 [ AAGAAGGGTGCTCAGAAGTCGCAGTCCTAGAAGGCCTTTAAGAGGAAGAAGTGCCTCTAGCTACAGCCGTAGTAGCAGCAGCTCAGGTTCCCCTATCCGCAATTAAAACTCTTGGCATGGCATGGCATGGAATGGAATGGTGTGGTGATCCTGGTAGGTAAATCTTTCCGTCTCGTCCCTTTTTATCGCTGATTTTGTGTCTTTTT GTCTTTGCTGCTGCTGTTTTTGTTGTCAAGCTTTGGTTCTTCGTGTGAGTTTGGGGCTTTGCGCGATGGTGCATGCGTTCCCTACGATCAAGCTGGCACTGGAACATTTAGATATTGCTGGAAGTTAAACATTTTCAAGCTTCTTGGAGGCTCTGTCTGAACTCTGGATTTCTCCTCTTGGAGGGAGCGATGACTTATGCATGTCAATGCTGCAGTAAATAAAGTGGAGTACATTAGTATTCTGTAGTAGCCTATTAAAGCACAGATTTCTGTGGGTTGGGAATCCAGGAGCACCAACATTTACTGGTGAAATTGAATTCACCACTCACTTGTCGAACCTGAAGGCAAGATTGACTTGACAATTTCTCTTTGTAATGGTTATGTTTTGTTATCTACGTGGAGTTATTTTGGACATCTGAACCTTTAGATTCCAGTGGAGATGATATCATCTCCAAAAAGATCTTGTCATGGAGTTGACTATCAATGTTTTGGCAGGCAGGAAAAAAATGAAATTAAATT] [-] EMBL CB646970 [ GAAGGGTGCTCAGAAGTCGCAGTCCTAGAAGGCCTTTAAGAGGAAGAAGTGCCTCTAGCTACAGCCGTAGTAGCAGCAGCTCAGGTTCCCCTATCCGCAATTAAAACTCTTGGCATGGCATGGCATGGAATGGAATGGTGTGGTGATCCTGGTAGGTAAATCTTTCCGTCTCGTCCCTTTTTATCGCGGATTTTGTGTCTTTTTGGTCTTTGCTGCTGCTGTTTTTGTTGTCAAGCTTTGGTTCTTCGTGTGAGTTTGGGGCTTTGCGCGATGGTGCATGCGTTCCCTACGATCAAGCTGGCACTGGAACATTTAGATATTGCTGGAAGTTAAACATTTTCAAGCTTCTTGGAGGCTCTGTCTGAACTCTGGATTTCTCCTCTTGGAGGGAGCGATGACTTATGCATGTCAATGCTGCAGTAAATAAAGTGGAGTACATTAGTATTCTGTAGTAGCCTATTAAAGCACAGATTTCTGTGGGTTGGGAATCCAGGAGCACCAACATTTACTGGTGAAATTGAATTCACCACTCACTTGTCGAACCTGAAGGCAAGATTGACTTGACAATTTCTCTTTGTAAAAGGGATGTTTTGTTATCTACGT ] [+] EMBL CA764165 [ GGGTGCTCAGAAGTCGCAGTCCTAGAAGGCCTTTAAGAGGAAGAAGTGCCTCTAGCTACAGCCGTAGTAGCAGCAGCTCAGGTTCCCCTATCCGCAATTAAAACTCTTGGCATGGCATGGCATGGAATGGAATGGTGTGATGATCCTGGTAGGTAAATCTTTCCGTCTCGTCCCTTTTTATCGCTGATTTTGTGTCTTTTT GTCTTTGCTGCTGCTGTTTTTGTTGTCAAGCTTTGGTTCTTCGTGTGAGTTTGGGGCTTTGCGCGATGGTGCATGCGTTCCCTACGATCAAGCTGGCACTGGAACATTTAGATATTGCTGGAAGTTAAACATTTTCAAGCTTCTTGGAGGCTCTGTCTGAACTCTGGATTTCTCCTCTTGGAGGGAGCGATGACTTATGCATGTCAATGCTGCAGTAAATAAAGTGGAGTACATTAGTATTCTGTAGTAGCCTATTAAAGCACAGATTTCTGTGGGTTGGGAATCCAGGAGCACCAACATTTACTGGTGAAATTGAATTCACCACTCACTTGTCGAACCTGAANGCAAGATTGACTTGACAATTTCTCTTTGNAATGGGTATGGTTTGGTATCTACGNGGAGNTA ] [+] EMBL CB096713 [ GGGTGCTCAGAAGTCGCAGTCCTAGAAGGCCTTTAAGAGGAAGAAGTGCCTCTAGCTACAGCCGTAGTAGCAGCAGCTCAGGTTCCCCTATCCGCAATTAAAACTCTTGGCATGGCATGGCATGGAATGGAATGGTGTGGTGATCCTGGTAGGTAAATCTTTCCGTCTCGTCCCTTTTTATCGCTGATTGTGTGTCTTTTT GTCTTTGCTGCTGCTGTTTTTGTTGTCAAGCTTTGGTTCTTCGTGTGAGTTTGGGGCTTTGCGCGATGGTGCATGCGTTCCCTACGATCAAGCTGGCACTGGAACATTTAGATATTGCTGGAAGTTAAACATTTTCAAGCTTCTTGGAGGCTCTGTCTGAACTCTGGATTTCTCCTCTTGGAGGGAGCGATGACTTATGCATGTCAATGCTGCAGTAAATAAAGTGGAGTACATTAGTGTTCTGTAGTAGCCTATTAAAGCACAGATTTCTGTGGGTTGGGAATCCAGGAGCACCAACATTTACTGGTGAAATTGAATTCACCACTCACTTGTCGAACCTGAAGGCAAGATTGACTTGACAATTTCTCTTTGTAATGGTTATGTTT ] consensusID : consensus_16223#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1325 fasta sequence [TCGTCTCCGTCTCCGTCTCCGGCGATGGCCACCAAGCCCCGCCGCCGCTCCCCGTCGCTCTCCTCCTCCTCCTCAACATCCTACTCGCGCTCCCCCGCATCGCCCTCCTCCTCCCCGTCGCGCAGCCGCTCCCCTCCCCGCCCCGCGGGGGGGGCCCGCTCGCCTTCGCCGCCGCCGCCACCGCCTCCTCCCAGGAAAGCGTCTCCGCCCCCTGAGTCCACCGTCCTCCATGTTGACCATCTCTCCAGGAACGTCAATGAGGATCATCTCAAGGAGATTTTTGAAAATTATGGTGAAGTCGTCAATGTGGAGCTCTCCATGGATAGGGTGGTCAATCTTCCCCGTGGGTATGGATATGTTGAGTTCAAGAATAGAGCTGATGCAGAGAAGGCTCTTCTTTACTTGGATGGTGGCCAAATTGATGGAAATGTTGTTAAAGTCAGATTCGCGCTTCCACCACAGCAGCAAAGAGCTGCTGCTTCTCCAAAAGCTCTTCACCCTTCACCAAAAAGGGATGTGGAGTCCTCCCAGAAGACCACAGTCACTTCGCCATCGCAGTAGATCTCCCATTCACCGACCAATTCGCTCCCCTTCCAGATCGATTTCTCCACGCAGGGGTCGGGGTCCTCCTGTGCGCCGTGGACGGTCATCCTCATCGTATTCTGATTCACCTACTCCTCCGAGAAGGGGACCAAGAAGGGTGCTCAGAAGTCGCAGTCCTAGAAGGCCTTTAAGAGGAAGAAGTGCCTCTAGCTACAGCCGTAGTAGCAGCAGCTCAGGTTCCCCTATCCGCAATTAAAACTCTTGGCATGGCATGGCATGGAATGGAATGGTGTGGTGATCCTGGTAGGTAAATCTTTCCGTCTCGTCACTTTTTATCGCTGATTTTGTGTCTTTTTGTCTTTGCTGCTGCTGTTTTTGTTGTCAAGCTTTGGTTCTTCGTGTGAGTTTGGGGCTTTGCGCGATGGTGCATGCGTTCCCTACGATCAAGCTGGCACTGGAACATTTAGATATTGCTGGAAGTTAAACATTTTCAAGCTTCTTGGAGGCTCTGTCTGAACTCTGGATTTCTCCTCTTGGAGGGAGCGATGACTTATGCATGTCAATGCTGCAGTAAATAAAGTGGAGTACATTAGTATTCTGTAGTAGCCTATTAAAGCACAGATTTCTGTGGGTTGGGAATCCAGGAGCACCAACATTTACTGGTGAAATTGAATTCACCACTCACTTGTCGAACCTGAAGGCAAGATTGACTTGACAATTTCTCTTTGTAATGGTTAGTGTTTTGTTATCTA-CGTGGAGTTATTTTGGACAAAAAAAAAAAA] [+] EMBL CB678114 [TCGTCTCCGTCTCCGTCTCCGGCGATGGCCACCAAGCCCCGCCGCCGCTCCCCGTCGCTCTCCTCCTCCTCCTCAACATCCTACTCGCGCTCCCCCGCATCGCCCTCCTCCTCCCCGTCGCGCAGCCGCTCCCCTCCCCGCCCCGCGGGGGGGGCCCGCTCGCCTTCGCCGCCGCCGCCACCGCCTCCTCCCAGGAAAGCGTCTCCGCCCCCTGAGTCCACCGTCCTCCATGTTGACCATCTCTCCAGGAACGTCAATGAGGATCATCTCAAGGAGATTTTTGAAAATTATGGTGAAGTCGTCAATGTGGAGCTCTCCATGGATAGGGTGGTCAATCTTCCCCGTGGGTATGGATATGTTGAGTTCAAGAATAGAGCTGATGCAGAGAAGGCTCTTCTTTACTTGGATGGTGGCCAAATTGATGGAAATGTTGTTAAAGTCAGATTCGCGCTTCCACCACAGCAGCAAAGAGCTGCTGCTTCTCCAAAAGCTCTTCACCCTTCACCAAAAAGGGATGTGGAGTCCTCCCAGAAGACCACAGTCACTTCGCCATCGCAGTAGATCTCCCATTCACCGACCAATTCGCTCCCCTTCCAGATCGATTTCTCCACGCAGGGGTCGGGGTCCTCCTGTGCGCCGTGGACGGTCATCCTCATCGTATTCTGATTCACCTA ] [-] EMBL CB629507 [ ATGTGGAGTCCTCCCAGAAGACCACAGTCACTTCGCCATCGCAGTAGATCTCCCATTCACCGACCAATTCGCTCCCCTTCCAGATCGATTTCTCCACGCAGGGGTCGGGGTCCTCCTGTGCGCCGTGGACGGTCATCCTCATCGTATTCTGATTCACCTACTCCTCCGAGAAGGGGACCAAGAAGGGTGCTCAGAAGTCGCAGTCCTAGAAGGCCTTTAAGAGGAAGAAGTGCCTCTAGCTACAGCCGTAGTAGCAGCAGCTCAGGTTCCCCTATCCGCAATTAAAACTCTTGGCATGGCATGGCATGGAATGGAATGGTGTGGTGATCCTGGTAGGTAAATCTTTCCGTCTCGTCACTTTTTATCGCTGATTTTGTGTCTTTTTGTCTTTGCTGCTGCTGTTTTTGTTGTCAAGCTTTGGTTCTTCGTGTGAGTTTGGGGCTTTGCGCGATGGTGCATGCGTTCCCTACGATCAAGCTGGCACTGGAACATTTAGATATTGCTGGAAGTTAAACATTTTCAAGCTTCTTGGAGGCTCTGTCTGAACTCTGGATTTCTCCTCTTGGAGGGAGCGATGACTTATGCATGTCAATGCTGCAGTAAATAAAGTGGAGTACATTAGTATTCTGTAGTAGCCTATTAAAGCACAGATTTCTGTGGGTTGGGAGTGCAGGAGCACCAACATTTACTGGTGAAATTGAATTCACCACTCACTTGTCGAA ] [-] EMBL CB668008 [ AGTCACTTCGCCATCGCAGTAGATCTCCCATTCACCGACCAATTCGCTCCCCTTCCAGATCGATTTCTCCACGCAGGGGTCGGGGTCCTCCTGTGCGCCGTGGACGGTCATCCTCATCGTATTCTGATTCACCTACTCCTCCAAGAAGGGGACCAAGAAGGGTGCTCAGAAGTCGCAGTCCTAGAAGGCCTTTAAGAGGAAGAAGTGCCTCTAGCTACAGCCGTAGTAGCAGCAGCTCAGGTTCCCCTATCCGCAATTAAAACTCTTGGCATGGCATGGCATGGAATGGAATGGTGTGGTGATCCTGGTAGGTAAATCTTTCCGTCTCGTCCCTTTTTATCGCTGATTTTGTGTCTTTTTGTCTTTGCTGCTGCTGTTTTTGTTGTCAAGCTTTGGTTCTTCGTGTGAGTTTGGGGCTTTGCGCGATGGTGCATGCGTTCCCTACGATCAAGCTGGCACTGGAACATTTAGATATTGCTGGAAGTTAAACATTTTCAAGCTTCTTGGAGGCTCTGTCTGAACTCTGGATTTCTCCTCTTGGAGGGAGCGATGACTTATGCATGTCAATGCTGCAGTAAATAAAGTGGAGTACATTAGTATTCTGTAGTAGCCTATTAAAGCACAGATTTCTGTGGGTTGGGAATCCAGGAGCACCAACATTTACTGGTGAAATTGAATTCACCACTCACTTGTCGAACCTGAAGGCAAGATTGACTTGACAATTTCTCTTTGTAATGGTTAGTGTTTTGTTATCTAGCGTGGAGTTATTTTGGACAAAAAAAAgga ] [-] EMBL CB629537 [ CCATTCACCGACCAATTCGCTCCCCTTCCAGATCGATTTCTCCACGCAGGGGTCGGGGTCCTCCTGTGCGCCGTGGACGGTCATCCTCATCGTATTCTGATTCACCTACTCCTCCGAGAAGGGGACCAAGAAGGGTGCTCAGAAGTCGCAGTCCTAGAAGGCCTTTAAGAGGAAGAAGTGCCTCTAGCTACAGCCGTAGTAGCAGCAGCTCAGGTTCCCCTATCCGCAATTAAAACTCTTGGCATGGCATGGCATGGAATGGAATGGTGTGGTGATCCTGGTAGGTAAATCTTTCCGTCTCGTCACTTTTTATCGCTGATTTTGTGTCTTTTTGTCTTTGCTGCTGCTGTTTTTGTTGTCAAGCTTTGGTTCTTCGTGTGAGTTTGGGGCTTTGAAAGATGGTGCATGCGTTCCCTACGATCAAGCTGGCACTGGAACATTTAGATATTGCTGGAAGTTAAACATTTTCAAGCTTCTTGGAGGCTCTGTCTGAACTCTGGATTTCTCCTCTTGGAGGGAGCGATGACTTATGCATGTCAATGCTGCAGTAAATAAAGTGGAGTACATTAGTATTCTGTAGTAGCCTATTAAAGCACAGATTTCTGTGGGTTGGGAGTCCAGGAGCACCAACATTTACTGGTGAAATTGAATTCA ] [-] EMBL CB657654 [ CCAATTCGCTCCCCTTCCAGATCGATTTCTCCACGCAGGGGTCGGGGTCCTCCTGTGCGCCGTGGACGGTCATCCTCATCGTATTCTGATTCACCTACTCCTCCAAGAAGGGGACCAAGAAGGGTGCTCAGAAGTCGCAGTCCTAGAAGGCCTTTAAGAGGAAGAAGTGCCTCTAGCTACAGCCGTAGTAGCAGCAGCTCAGGTTCCCCTATCCGCAATTAAAACTCTTGGCATGGCATGGCATGGAATGGAATGGTGTGGTGATCCTGGTAGGTAAATCTTTCCGTCTCGTCCCTTTTTATCGCTGATTTTGTGTCTTTTTGTCTTTGCTGCTGCTGTTTTTGTTGTCAAGCTTTGGTTCTTCGTGTGAGTTTGGGGCTTTGCGCGATGGTGCATGCGTTCCCTACGATCAAGCTGGCACTGGAACATTTAGATATTGCTGGAAGTTAAACATTTTCAAGCTTCTTGGAGGCTCTGTCTGAACTCTGGATTTCTCCTCTTGGAGGGAGCGATGACTTATGCATGTCAATGCTGCAGTAAATAAAGTGGAGTACATTAGTATTCTGTAGTAGCCTATTAAAGCACAGATTTCTGTGGGTTGGGAATCCAGGAGCACCAACATTTACTGGTGAAATTGAATTCACCACTCACTTGTCGAACCTGAAGGCAAGATTGACTTGACAATTTCTCTTTGTAATGGTTAG GTTTTGTTATCTA CGTGGAGTTATTTTGGCCAAAAAAAAAAga] [-] EMBL CF277497 [ CTGTTTTTGTTGTCAAGCTTTGGTTCTTCGTGTGAGTTTGGGGCTTTGCGCGATGGTGCATGCGTTCCCTACGATCAAGCTGGCACTGGAACATTTAGATATTGCTGGAAGTTAAACATTTTCAAGCTTCCTGGAGGCTCTGTCTGAACTCTGGATTTCTCCTCTTGGAGGGAGCGATGACTTATGCATGTCAATGCTGCAGTAAATAAAGTGGAGTACATTAGTATTCTGTAGTAGCCTATTAAAGCACAGATTTCTGTGGGTTGGGAATCCAGGAGCACCAACATTTACTGGTGAAATTGAATTCACCACTCACTTGTCGAACCTGAAGGCAAGATTGACTTGACAATTTCTCTTTGTAATGGTT GTGTTTTGTTATCTA CGTGGAGTTATTTTGGACAAAAAAAAAAA ] consensusID : consensus_16223#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 628 fasta sequence [GATATGTTGAGTTCAAGAATAGAGCTGATGCAGAGAAGGCTCTTCTTTACTTGGATGGTGGCCAAATTGATGGAAATGTTGTTAAAGTCAGATTCGCGCTTCCACCACAGCAGCAAAGAGCTGCTGCTTCTCCAAAAGCTCTTCACCCTTCACCAAAAAGGGATGTGGTTGATCATAATAAAGTTGGTCCTAGTGCTGAAAAGGCCACCAAACAGCAGCCCAGGAAACCAGCATCTCCTCAAAGAAAGCCAGCTCCATCTCCAAGAAGGCGATCTCCTCCAATTCGCCGTCGAACAGCTCCTTCTCCAATCAGGCATGGTGGAACTCCTAGCAGGAGACCAGGATCCCCAATCAGAAGGCGCTCACCCTCTCCGCCCCCTCGAAGACTAAGATCACCAAGGCACCTATCACCAAGAAGAGATCGGGGCAGTCCAATCCGCAGGCGCTCCCCATTGCCTCGTAGAAGGCTGACTCCTCCAAGGAGGATGTGGAGTCCTCCCAGAAGACCACAGTCACTTCGCCATCGCAGTAGATCTCCCATTCACCGACCAATTCGCTCCCCTTCCAGATCGATTTCTCCACGCAGGGGTCGGGGTCCTCCTGTGCGCCGTGGACGGTCATCCTCATC] [+] EMBL CB646969 [GATATGTTGAGTTCAAGAATAGAGCTGATGCAGAGAAGGCTCTTCTTTACTTGGATGGTGGCCAAATTGATGGAAATGTTGTTAAAGTCAGATTCGCGCTTCCACCACAGCAGCAAAGAGCTGCTGCTTCTCCAAAAGCTCTTCACCCTTCACCAAAAAGGGATGTGGTTGATCATAATAAAGTTGGTCCTAGTGCTGAAAAGGCCACCAAACAGCAGCCCAGGAAACCAGCATCTCCTCAAAGAAAGCCAGCTCCATCTCCAAGAAGGCGATCTCCTCCAATTCGCCGTCGAACAGCTCCTTCTCCAATCAGGCATGGTGGAACTCCTAGCAGGAGACCAGGATCCCCAATCAGAAGGCGCTCACCCTCTCCGCCCCCTCGAAGACTAAGATCACCAAGGCACCTATCACCAAGAAGAGATCGGGGCAGTCCAATCCGCAGGCGCTCCCCATTGCCTCGTAGAAGGCTGACTCCTCCAAGGAGGATGTGGAGTCCTCCCAGAAGACCACAGTCACTTCGCCATCGCAGTAGATCTCCCATTCACCGACCAATTCGCTCCCCTTCCAGATCGATTTCTCCACGCAGGGGTCGGGGTCCTCCTGTGCGCCGTGGACGGTCATCCTCATC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_16223#0 AACCCATCCATCACCGCATCTCATCGTCTCCGTCTCCGTCTCCGGCGATGGCCACCAAGC 60 consensus_16223#2 ------------------------------------------------------------ consensus_16223#1 -----------------------TCGTCTCCGTCTCCGTCTCCGGCGATGGCCACCAAGC 37 consensus_16223#0 CCCGCCGCCGCTCCCCGTCGCTCTCCTCCTCCTCCTCAACATCCTACTCGCGCTCCCCCG 120 consensus_16223#2 ------------------------------------------------------------ consensus_16223#1 CCCGCCGCCGCTCCCCGTCGCTCTCCTCCTCCTCCTCAACATCCTACTCGCGCTCCCCCG 97 consensus_16223#0 CATCGCCCTCCTCCTCCCCGTCGCGCAGCCGCTCCCCTCCCCGCCCCGCGGGGGGGGCCC 180 consensus_16223#2 ------------------------------------------------------------ consensus_16223#1 CATCGCCCTCCTCCTCCCCGTCGCGCAGCCGCTCCCCTCCCCGCCCCGCGGGGGGGGCCC 157 consensus_16223#0 GCTCGCCTTCGCCGCCGCCGCCACCGCCTCCTCCCAGGAAAGCGTCTCCGCCCCCTGAGT 240 consensus_16223#2 ------------------------------------------------------------ consensus_16223#1 GCTCGCCTTCGCCGCCGCCGCCACCGCCTCCTCCCAGGAAAGCGTCTCCGCCCCCTGAGT 217 consensus_16223#0 CCACCGTCCTCCATGTTGACCATCTCTCCAGGAACGTCAATGAGGATCATCTCAAGGAGA 300 consensus_16223#2 ------------------------------------------------------------ consensus_16223#1 CCACCGTCCTCCATGTTGACCATCTCTCCAGGAACGTCAATGAGGATCATCTCAAGGAGA 277 consensus_16223#0 TTTTTGAAAATTATGGTGAAGTCGTCAATGTGGAGCTCTCCATGGATAGGGTGGTCAATC 360 consensus_16223#2 ------------------------------------------------------------ consensus_16223#1 TTTTTGAAAATTATGGTGAAGTCGTCAATGTGGAGCTCTCCATGGATAGGGTGGTCAATC 337 consensus_16223#0 TTCCCCGTGGGTATGGATATGTTGAGTTCAAGAATAGAGCTGATGCAGAGAAGGCTCTTC 420 consensus_16223#2 ---------------GATATGTTGAGTTCAAGAATAGAGCTGATGCAGAGAAGGCTCTTC 45 consensus_16223#1 TTCCCCGTGGGTATGGATATGTTGAGTTCAAGAATAGAGCTGATGCAGAGAAGGCTCTTC 397 ********************************************* consensus_16223#0 TTTACTTGGATGGTGGCCAAATTGATGGAAATGTTGTTAAAGTCAGATTCGCGCTTCCAC 480 consensus_16223#2 TTTACTTGGATGGTGGCCAAATTGATGGAAATGTTGTTAAAGTCAGATTCGCGCTTCCAC 105 consensus_16223#1 TTTACTTGGATGGTGGCCAAATTGATGGAAATGTTGTTAAAGTCAGATTCGCGCTTCCAC 457 ************************************************************ consensus_16223#0 CACAGCAGCAAAGAGCTGCTGCTTCTCCAAAAGCTCTTCACCCTTCACCAAAAAGGGATG 540 consensus_16223#2 CACAGCAGCAAAGAGCTGCTGCTTCTCCAAAAGCTCTTCACCCTTCACCAAAAAGGGATG 165 consensus_16223#1 CACAGCAGCAAAGAGCTGCTGCTTCTCCAAAAGCTCTTCACCCTTCACCAAAAAGGGATG 517 ************************************************************ consensus_16223#0 TGGTTGATCATAATAAAGTTGGTCCTAGTGCTGAAAAGGCCACCAAACAGCAGCCCAGGA 600 consensus_16223#2 TGGTTGATCATAATAAAGTTGGTCCTAGTGCTGAAAAGGCCACCAAACAGCAGCCCAGGA 225 consensus_16223#1 TGGA-GTCCTCCCAGAAGACCACAGTCACTTCGCCATCGCAGTAGATCTCCCATTCACCG 576 *** * * *** * * * ** * * * ** consensus_16223#0 AACCA---TCTCCTCAAAGAAAGCCAGCTCCATCTCCAAGAAGGCGATCTCCTCCAAGTC 657 consensus_16223#2 AACCAGCATCTCCTCAAAGAAAGCCAGCTCCATCTCCAAGAAGGCGATCTCCTCCAA--- 282 consensus_16223#1 ACCAATTCGCTCCCCTTCCAGA-TCGATTTCTCCACGCAGGGGTCGGGGTCCTCCTG--- 632 * * * **** * * * * * * * * ** * ** ****** consensus_16223#0 GAAGAGTTGAATCACCTAGGTGTAGGCCTGATTCTCCTCCAATTCGCCGTCGAACAGC-T 716 consensus_16223#2 ------------------------------------------TTCGCCGTCGAACAGC-T 299 consensus_16223#1 ------------------------------------------TGCGCCGTGGACGGTCAT 650 * ****** ** * * consensus_16223#0 CCTTCTCCAATCAGGCATGGTGGAA--CTCCTAGCAGGAGACCAGGATCCCCAATCAGAA 774 consensus_16223#2 CCTTCTCCAATCAGGCATGGTGGAA--CTCCTAGCAGGAGACCAGGATCCCCAATCAGAA 357 consensus_16223#1 CCTCATCGTATTCTGATTCACCTACTCCTCCGAGAAGGGGACCAAGAAGGGTGCTCAGAA 710 *** ** ** * * * **** ** *** ***** ** ****** consensus_16223#0 GGCGCTCACCCTCTCCGCCCCCTCGAAGACTAAGATCACCAAGGCACCTATCACCAAGAA 834 consensus_16223#2 GGCGCTCACCCTCTCCGCCCCCTCGAAGACTAAGATCACCAAGGCACCTATCACCAAGAA 417 consensus_16223#1 GTCGCAGTCCTAGAAGGCCTTTAAGAGGAAGAAGTGCCTCTAGCTACAGCCGTAGTAGCA 770 * *** ** *** ** ** *** * * ** ** ** * consensus_16223#0 GAGATCGGGGCAGTCCAATCCGCAG-----GCGCTCCCCATTGCCTCGTAGAAGGCTGAC 889 consensus_16223#2 GAGATCGGGGCAGTCCAATCCGCAG-----GCGCTCCCCATTGCCTCGTAGAAGGCTGAC 472 consensus_16223#1 GCAGCTCAGGTTCCCCTATCCGCAATTAAAACTCTTGGCATGGCATGGCATGGAATGGAA 830 * ** ** ******* * ** *** ** * * * ** consensus_16223#0 TCCTCCAAGGA----GGATGTGGAGTCCTCCCAGAAGACCACAGTCACTTCGCCATCGCA 945 consensus_16223#2 TCCTCCAAGGA----GGATGTGGAGTCCTCCCAGAAGACCACAGTCACTTCGCCATCGCA 528 consensus_16223#1 TGGTGTGGTGATCCTGGTAGGTAAATCTTTCCGTCTCGTCACT-TTTTATCGCTGATTTT 889 * * ** ** * * ** * ** *** * **** consensus_16223#0 GTAGATCTCCCATTCACCGACCAATTCGCTCCCCTTCCAGATCGATTTCTCCACGCAGGG 1005 consensus_16223#2 GTAGATCTCCCATTCACCGACCAATTCGCTCCCCTTCCAGATCGATTTCTCCACGCAGGG 588 consensus_16223#1 GTGTCTTTTTGTCTTTGCTGCTGCTGTTTTTGTTGTCAAGCTTTGGTTCTTCGTGT-GAG 948 ** * * * * * * * ** ** * **** * * * * consensus_16223#0 GTCGGGGTCCTCCTGTGCGCCGTGGACGGTCATCCTCATCGTATTCTGATTCACCTACTC 1065 consensus_16223#2 GTCGGGGTCCTCCTGTGCGCCGTGGACGGTCATCCTCATC-------------------- 628 consensus_16223#1 TTTGGGGCTTTGCGCGATGGTGCATGCGTTCCCTACGATCAAGCTGGCACTGGAACATTT 1008 * **** * * * * ** ** *** consensus_16223#0 CTCCAAGAAGGGGACCAAGAAGGGTGCTCAGAAGTCGCAGTCCTAGAAGGCCTTTAAGAG 1125 consensus_16223#2 ------------------------------------------------------------ consensus_16223#1 AGATATTGCTGGAAGTTAAACATTTTCAAGCTTCTTGGAGGCTCTGTCTGAACTCTGGAT 1068 consensus_16223#0 GAAGAAGTGCCTCTAGCTACAGCCGTAGTAGCAGCAGCTCAGGTTCCCCTATCCGCAATT 1185 consensus_16223#2 ------------------------------------------------------------ consensus_16223#1 TTCTCCTCTTGGAGGGAGCGATGACTTATGCATGTCAATGCTGCAGTAAATAAAGTGGAG 1128 consensus_16223#0 AAAACTCTTGGCATGGCATGGCATGGAATGGAATGGTGTGGTGATCCTGGTAGGTAAATC 1245 consensus_16223#2 ------------------------------------------------------------ consensus_16223#1 TACATTAGTATTCTGTAGTAGCCTATTAAAGCACAGATTTCTGTGGGTTGGGAATCCAGG 1188 consensus_16223#0 TTTCCGTCTCGTCCCTTTTTATCGCTGATTTTGTGTCTTTTTGTCTTTGCTGCTGCTGTT 1305 consensus_16223#2 ------------------------------------------------------------ consensus_16223#1 AGCACCAACATTTACTGGTGAAATTGAATTCACCACTCACTTGTCGAACCTGAAGGCAAG 1248 consensus_16223#0 TTTGTTGTCAAGCTTTGGTTCTTCGTGTGAGTTTGGGGCTTTGCGCGATGGTGCATGCGT 1365 consensus_16223#2 ------------------------------------------------------------ consensus_16223#1 ATTGACTTGACAATTTCTCTTTGTAATGGTTAGTGTTTTGTTATCTACGTGGAGTTATTT 1308 consensus_16223#0 TCCCTACGATCAAGCTGGCACTGGAACATTTAGATATTGCTGGAAGTTAAACATTTTCAA 1425 consensus_16223#2 ------------------------------------------------------------ consensus_16223#1 TGGACAAAAAAAAAAAA------------------------------------------- 1325 consensus_16223#0 GCTTCTTGGAGGCTCTGTCTGAACTCTGGATTTCTCCTCTTGGAGGGAGCGATGACTTAT 1485 consensus_16223#2 ------------------------------------------------------------ consensus_16223#1 ------------------------------------------------------------ consensus_16223#0 GCATGTCAATGCTGCAGTAAATAAAGTGGAGTACATTAGTATTCTGTAGTAGCCTATTAA 1545 consensus_16223#2 ------------------------------------------------------------ consensus_16223#1 ------------------------------------------------------------ consensus_16223#0 AGCACAGATTTCTGTGGGTTGGGAATCCAGGAGCACCAACATTTACTGGTGAAATTGAAT 1605 consensus_16223#2 ------------------------------------------------------------ consensus_16223#1 ------------------------------------------------------------ consensus_16223#0 TCACCACTCACTTGTCGAACCTGAAGGCAAGATTGACTTGACAATTTCTCTTTGTAATGG 1665 consensus_16223#2 ------------------------------------------------------------ consensus_16223#1 ------------------------------------------------------------ consensus_16223#0 TTATGTTTTGTTATCTACGTGGAGTTATTTTGGACATCTGAACCTTTAGATTCCAGTGGA 1725 consensus_16223#2 ------------------------------------------------------------ consensus_16223#1 ------------------------------------------------------------ consensus_16223#0 GATGATATCATCTCCAAAAAGATCTTGTCATGGAGTTGACTATCAATGTTTTGGCAGGCA 1785 consensus_16223#2 ------------------------------------------------------------ consensus_16223#1 ------------------------------------------------------------ consensus_16223#0 GGAAAAAAATGAAATTAAATT 1806 consensus_16223#2 --------------------- consensus_16223#1 --------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||