|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16224#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 962 fasta sequence
[CTGATCCACTCCATCGCCAATTCGCCGTATCAACTCACCAACTGGGGAAAACGCCGAAGTCGAGGAGGGGAGGCCGCCCGGTCCGCGCGCGATGGCCATGGAGGGGGTGAGGGTGGTGACGCTGCGGGCGGTGGAGGCCACGCCCGAGTCCTTCGCGCCGTTCGGCCAGGTCGTCGCCGCCTACGGC-NAAAG-CGCTTCGGTCCCAACGATGCCCAGCTCGACCTCAGCCGCGGCGTCCCAAGGTTCTACATCATGAGGTTGGAGAAGCGGCCGCTCAAGTTCTGGACGATCACCCACCACGCGAGCGTGACCCAGTGCCTCGGCTCCATCGGCGGCGAAGATTGGTACCTCGGCGTGGCCAAGCCCTCGATCGTGGAGGATGGGGCACACGAGCAGG-GCGGCGAT-GGGA-GGAA-GCCCGTGCAGTC-GC-GTGCTGGCCACTACTACCTTCCTCCCGATCCAGCTGAAGTCTGCGTCTTCAGGGTTTCCGGCGCTAAGTTTC-TGAAGCTGCACATCGGGA-CCTGG-CATGCGGGG-CCG-CA-GTTCAAGGCGGATGCGGTGGATTT-CTACAA-CCTGGAGCTC-AGCAACACCAATATTGTCGACCACACTACGCACGATTTCAAGAAAGACGACGGGGTAACTTTTGTGATTGAGGACTGAGACACATTTCACAACCTAAGGCTGGGT-AATGAATATGCTAGACTGTTTGCATGTCTTGTCTGTTTCCTGAGTTTTTAATGAACAATCGATATGCAAATGTGATGTACAATATGCACATATGAGCTGCTTGTTCAAGTCATTGTAAAAAACAAATTAAGAAAAAAGAGGCAAGGGGAGTCTCTAGTGGGTACACCCAAAAGGGCAAAAAGCCGTCCAGTATGAAATGATGTTGCTCTTTTCTGAAAACAATATGAATGATTTGAGTCAATAAGTGATGTATTTCCAGAGAGAGAACTATCAGACAATGG]
[+] EMBL AK121629 [CTGATCCACTCCATCGCCAATTCGCCGTATCAACTCACCAACTGGGGAAAACGCCGAAGTCGAGGAGGGGAGGCCGCCCGGTCCGCGCGCGATGGCCATGGAGGGGGTGAGGGTGGTGACGCTGCGGGCGGTGGAGGCCACGCCCGAGTCCTTCGCGCCGTTCGGCCAGGTCGTCGCCGCCTACGGCGGCAAG CGCTTCGGTCCCAACGATGCCCAGCTCGACCTCAGCCGCGGCGTCCCAAGGTTCTACATCATGAGGTTGGAGAAGCGGCCGCTCAAGTTCTGGACGATCACCCACCACGCGAGCGTGACCCAGTGCCTCGGCTCCATCGGCGGCGAAGATTGGTGCCTCGGCGTGGCCAAGCCCTCGATCGTGGAGGATGGGGCACACGAGCAGG GCGGCGAT GGGA GGAA GCCCGTGCAGTC GC GTGCTGGCCACTACTACCTTCCTCCCGATCCAGCTGAAGTCTGCGTCTTCAGGGTTTCCGGCGCTAAGTTTC TGAAGCTGCACATCGGGA CCTGG CATGCGGGG CCG CA GTTCAAGGCGGATGCGGTGGATTT CTACAA CCTGGAGCTC AGCAACACCAATATTGTCGACCACACTACGCACGATTTCAAGAAAGACGACGGGGTAACTTTTGTGATTGAGGACTGAGACACATTTCACAACCTAAGGCTGGGT AATGAATATGCTAGACTGTTTGCATGTCTTGTCTGTTTCCTGAGTTTTTAATGAACAATCGATATGCAAATGTGATGTACAATATGCACATATGAGCTGCTTGTTCAAGTCATTGTAAAAAACAAATTAAGAAAAAAGAGGCAAGGGGAGTCTCTAGTGGGTACACCCAAAAGGGCAAAAAGCCGTCCAGTATGAAATGATGATGCTCTTTTCTGAAAACAATATGAATGATTTGAGTCAATAAGTGATGTATTTCCAGAGAGAGAACTATCAGACAATGG]
[+] EMBL OS1321803 [ ACTCCATCGCCAATTCGCCGTATCAACTCACCAACTGGGGAAAACGNCGAAGTCGAGGAGGGGAGGCCGCCCGGTCCGCGCGCGATGGCCATGGAGGGGGTGAGGGTGGTGACGCTGCGNGCGNTGGAGGCCACG CCGAGTCCTTCGCGGCGTTCGGNCAGGTCGTCGTCGNCTACGGC AAANG CGNTTCGG ]
[+] EMBL AU070633 [ AACTCACCAACTGGGGAAAACGCCGAAGTCGAGGAGGGGAGGCCGCCCGGTCCGCGCGCGATGGCCATGGAGGGGGTGAGGGTGGTGACGCTGCGGGCGGTGGAGGCCACGCCCGAGTCCTTCGCGCCGTTCGGCCAGGTCGTCGCCGCCTACGGG NANAG CGCTTCGGTCCCAACGATGCCCAGCTCGACCTCAGCCGCGGCGTCCCAAGGTTCTACATCATGA ]
[+] EMBL OS1321707 [ CTCACCAACTGGGGAAAACGCCGAAGTCGAGGAGGGGAGGCCGCCCGGTCCGCGCGCNATGGCCATGGAGGGGGTGAGGGTGGTGACGCTGCGGGCGGTGGAGGCCACGCCCGATTCCTTCGCGCCGTTCGGCCAGGTCGTCGCCGCCTACGG NAANGNCGCTTCGGTCCCAACGATGCCCAGCTCGACCTCAGCCGCGGCGTCCCAAGGTTCTACATCATGAGGTTGGA ]
[+] EMBL AU101831 [ AAGTTCTGGACGATCACCCACCACGCGAGCGTGACCCAGTGCCTCGGCTCCATCGGCGGCGAAGATTGGTACCTCGGCGTGGCCAAGCCCTCGATCGTGGAGGATGGGGCACACGAGCAGG GCGGCGAT GGGA GGAA GCCCGTGCAGTC GC GTGCTGGCCACTACTACCTTCCTCCCGATCCAGCTGAAGTCTGCGTCTTCAGGGTTTCCGGCGCTAAGTTTC TGAAGCTGCACATCGGGA CCTGG CATGCGGGG CCG CA GTTCAANGCGGATGCGGTGGATTT CTACAA CCTGGAGCTC AGCAACACCAATATTGTCGANCACACTACGCACGATTTCAAGAAAGACGACGGGGTAACTTTTGTGATTGAGGACTGAGACACATTTCACAACCTAAGGCTGGGTNAATGAATATGCTAGACTGTTTGCATGTCTTNTCTGTTTCCTGAGTTTTTAATGAACAAT ]
[-] EMBL AU096900 [ GACGATCACCCACCACGCGAGCGTGACCCAGTGCCTCGGCTCCATCGGCGGCGAAGATTGGTACCTCGGCGTGGCCAAGCCCTCGATCGTGGAGGATGGGGCACACGAGCAGG GCGGCGAT GGGA GGAA GCCCGTGCAGTC GC GTGCTGGCCACTACTACCTTCCTCCCGATCCAGCTGAAGTCTGCGTCTTCAGGGTTTCCGGCGCTAAGTTTC TGAAGCTGCACATCGGGA CCTGG CATGCGGGG CCG CA GTTCAAGGCGGATGCGGTGGATTT CTACAA CCTGGAGCTC AGCAACACCAATATTGTCGACCACACTACGCACGATTTCAAGAAAGACGACGGGGTAACTTTTGTGATTGAGGACTGAGACACATTTCACAACCTAAGGCTGGGT AATGAATATGCTAGACTGTTTGCATGTCTTGTCTGTTTCCTGAGTTTTTAATGAACAATCGATATGCAAATGTGATGTACAATATGCACATATGAGCTGCTTGTTCAAGTC ]
[+] EMBL AU096839 [ CACGATCAGGCCCGCCGATAGGGATGGAANCCCCGTGCAGTCAGCAGTGCTGGCCACTACTACCTTCCTCCCGATCCAGCTGAAGTCTGCGTCTTCAGGGTTTCCGGCGCTAAGTTTC TGAAGCTGCACATCGGGA CCTGG CATGCGGGG CCGNCA GTTCAAGGCGGATGCGGTGGATTT CTACAA CCTGGAGCTC AGCAACACCAATATTGTCGACCACACTACGCACGATTTCAAGAAAGACGACGGGGTAACTTTTGTGATTGAGGACTGAGACACATTTCACAACCTAAGGCTGGGT AATGAATATGCTAGACTGTTTGCATGTCTTGTCTGTTTCCTGAGTTTTTAATGAACAATCGATATGCAAATGTGATGTACAATATGCACATATGAGCTGCTTGTTCAAGTCATTGTAAAAAACAAAaaa ]
[+] EMBL AU174576 [ TCAGGGTTTCCGGCGCTAAGTTTC TGAAGCTGCACATCGGGA CCTGG CATGCGGGG CCG CA GTTCAAGGCGGATGCGGTGGATTT CTACAA CCTGGAGCTC AGCAACACCAATATTGTCGACCACACTACGCACGATTTCAAGAAAGACGACGGGGTAACTTTTGTGATTGAGGACTGAGACACATTTCACAACCTAAGGCTGGGT AATGAATATGCTAGACTGTTTGCATGTCTTGTCTGTTTCCTGAGTTTTTAATGAACAATCGATATGCAAATGTGATGTACAATATGCACATATGAGCTGCTTGTTCAAGTCATTGTAAAAAACAAATTAAGAAAAAAGAGGCAAGGGGAGTCTCTAGTGGGTACACCCAAAAGGGCAAAAAGCCGTCCAGTATGAAATGATGTTGCTCTTTTCTGAAAACAATATGAATGATTTGAGTCAATAAaaaaaa ]
[-] EMBL OSC8031 [ cCCGCCNCTAAGTTCC TGAAANTGCACATCGGGACCCTGGCCATTCGGGGCCCG CAGGTTCAAGNCGGATNCGGTGGATTTCCTACAA CCTGGAGCTC AGCAACACCAATATTGCCGACCACACTACGCACGATTTCAAGAAAGACGACGGGGTAACTTTTGTGATTGAGGACTGAGACACATTTCACAACCTAAGGCTGGGT AATGAATATGCTAGACTGTTTGCATGTCTTGTCTGTTTCCTGAGTTTTTAATGAACAATCGATATGCAAATGTGATGTACAATATGCACATATGAGCTGCTTGTTCAAGTCATTGTAAAAAACAAATTAAGAAAAAAGAGGCAAGGGGAGTCTCTAGTGGGTACACCCAAAAGGGCAAAAAGCCGTCCAGTATGAAATGATGTTGCTCTTTTCTGAAAACAATATGAATGATTTGAGTCAATAAGTGAT ]
[-] EMBL OSS16450A [ CTAAGTTCCTTGAACCTGCACATCGGGA CCTGGCCATNCGGGGCCCG CA GTTCAAGGCGGATCCGGTGGATTTCCTACAACCCTGGAGCTCAAGCAACACCAATATTGTCGACCACACTACGCACGATTTCAAGAAAGACGACGGGGTAACTTTTGTGATTGAGGACTGAGACACATTTCACAACCTAAGGCTGGGT AATGAATATGCTAGACTGTTTGCATGTCTTGTCTGTTTCCTGAGTTTTTAATGAACAATCGATATGCAAATGTGATGTACAATATGCACATATGAGCTGCTTGTTCAAGTCATTGTAAAAAACAAATTAAGAAAAAAGAGGCAAGGGGAGTCTCTAGTGGGTACACCCAAAAGGGCAAAAAGCCGTCCAGTATGAAATGATGTTGCTCTTTTCTGAAAACAATATGAATGATTTGAGTCAATAAGTGAT ]
[+] EMBL AU032879 [ aCGNATGCGGTGGATTT CTACAA CCTGGAGCTC AGCAACACCAATATTGTCGACCACACTACGCACGATTTCAAGAAAGNCGACGGGGTAACTTTTGTGATTGAGGACTGAGACACATTTCACAACCTAAGGCTGGGT AATGAATATGCTAGACTGTTTNCATGNCTTGTCTGTTTCCTGAGTTTTTAATGAACAATCGATATGCAAATGTGATGTACAATATGCACATATGAGCTGCTTGTTCAAGTCATTGTAAAAAACAAAaa ]
consensusID : consensus_16224#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 804 fasta sequence
[GCCGCTCGACGATCGATGCAGGCGATTCGCCCGGGCCGTTCGTGCCGCCTGGGCCGTTCCTGCGGCCGCGACGGCGTCTCCTCCCGCTGCCTTGCTCGGCTCCACCGTAGCAGCGGCAGTAGCAACGGGGGCGGAGGAGCAGTGAGGTGCGCGAAGGCAGCCGCGCAGTCGATGGAGGCCGTGAAGAAGGACGAGGAGGCGAGGGTGGTGGCGCTGCGGGCGGTGGAGGCAACGCCCGAGTCGTTCGCGCCGTTCGGCCAGGTCATCGCCGCCACACCCGACGGCGACGAGTTTGGCCCCCACGACGCCCAGCTCGACCTCACCCGCGGCATCCCAAGGTTCTACATCATGAGGTTGGAGAAGCGGCCGCTCGAGTTCTGGACGATCACCCACCACGCGAGCGTGACCCAGTGCCTCGGCTCCATCGGCGGCGAAGATTGGTACCTCGGCGTGGCCAAGCCCTCGATCGTGGAGGATGGGGCACACGAGCAGGGCGGCGATGGGAGGAAGCCCGTGCAGTCGCGTGCTGGCCACTACTACCTTCCTCCCGATCCAGCTGAAGTCTGCGTCTTCAGGGTTTCCGGCGCTAAGTTTCTGAAGCTGCACATCGGGACCTGGCATGCGGGGCCGCAGTTCAAGGCGGATGCGGTGGATTTCTACAACCTGGAGCTCAGCAACACCAATATTGTCGACCACACTACGCACGATTTCAAGAAAGACGACGGGGTAACTTTTGTGATTGAGGACTGAGACACATTTCACAACCTAAGGCTGGGTAATGAATATGCTAGACTGGTTGCATGT]
[+] EMBL AU225381 [GCCGCTCGACGATCGATGCAGGCGATTCGCCCGGGCCGTTCGTGCCGCCTGGGCCGTTCCTGCGGCCGCGACGGCGTCTCCTCCCGCTGCCTTGCTCGGCTCCACCGTAGCAGCGGCAGTAGCAACGGGGGCGGAGGAGCAGTGAGGTGCGCGAAGGCAGCCGCGCAGTCGATGGAGGCCGTGAAGAAGGACGAGGAGGCGAGGGTGGTGGCGCTGCGGGCGGTGGAGGCAACGCCCGAGTCGTTCGCGCCGTTCGGCCAGGTCATCGCCGCCACACCCGACGGCGACGAGTTCGGCCCCCACGACGCCCAGCTCGACCTCACCCGCGGCATCCCAAGGTTCTACATCATGAGGTTGGAGAAGCGGCCGCTCAAGTTCTGGACGATCACCCACCACGCGAGCGTGACCCAGTGCCTCGGCTCCA ]
[+] EMBL AU174577 [ ACGATCGATGCAGGCGATTCGCCCGGGCCGTTCGTGCCGCCTGGGCCGTTCCTGCGGCCGCGACGGCGTCTCCTCCCGCTGCCTTGCTCGGCTCCACCGTAGCAGCGGCAGTAGCAACGGGGGCGGAGGAGCAGTGAGGTGCGCGAAGGCAGCCGCGCAGTCGATGGAGGCCGTGAAGAAGGACGAGGAGGCGAGGGTGGTGGCGCTGCGGGCGGTGGAGGCAACGCCCGAGTCGTTCGCGCCGTTCGGCCAGGTCATCGCCGCCACACCCGACGGCGACGAGTTCGGCCCCCACGACGCCCAGCTCGACCTCACCCGCGGCATCCCAAGGTTCTACATCATGAGGTTGGAGAAGCGGCCGCTCAAGTTCTGGACGATCACCCACCACGC ]
[+] EMBL BE230689 [ GCTGCGGGCGGTGGAGGCAACGCCCGAGTCGTTCGCGCCGTTCGGCCAGGTCATCGCCGCCACACCCGACGGCGACGAGTTTGGCCCCCACGACGCCCAGCTCGACCTCACCCGCGGCATCCCAAGGTTCTACATCATGAGGTTGGAGAAGCGGCCGCTCGAGTTCTGGACGATCACCCACCACGCGAGCGTGACCCAGTGCCTCGGCTCCATCGGCGGCGAAGATTGGTACCTCGGCGTGGCCAAGCCCTCGATCGTGGAGGATGGGGCACACGAGCAGGGCGGCGATGGGAGGAAGCCCGTGCAGTCGCGTGCTGGCCACTACTACCTTCCTCCCGATCCAGCTGAAGTCTGCGTCTTCAGGGTTTCCGGCGCTAAGTTTCTGAAGCTGCACATCGGGACCTGGCATGCGGGGCCGCAGTTCAAGGCGGATGCGGTGGATTTCTACAACCTGGAGCTCAGCAACACCAATATTGTCGACCACACTACGCACGATTTCAAGAAAGACGACGGGGTAACTTTTGTGATTGAGGACTGAGACACATTTCACAACCTAAGGCTGGGTAATGAATATGCTAGACTGGTTGCATGT]
[+] EMBL BE230164 [ GCTGCGGGCGGTGGAGGCAACGCCCGAGTCGTTCGCGCCGTTCGGCCAGGTCATCGCCGCCACACCCGACGGCGACGAGTTTGGCCCCCACGACGCCCAGCTCGACCTCACCCGCGGCATCCCAAGGTTCTACATCATGAGGTTGGAGAAGCGGCCGCTCGAGTTCTGGACGATCACCCACCACGCGAGCGTGACCCAGTGCCTCGGCTCCATCGGCGGCGAAGATTGGTACCTCGGCGTGGCCAAGCCCTCGATCGTGGAGGATGGGGCACACGAGCAGGGCGGCGATGGGAGGAAGCCCGTGCAGTCGCGTGCTGGCCACTACTACCTTCCTCCCGATCCAGCTGAAGTCTGCGTCTTCAGGGTTTCCGGCGCTAAGTTTCTGAAGCTGCACATCGGGACCTGGCATGCGGGGCCGCAGTTCAAGGCGGATGCGGTGGATTTCTACAACCTGGAGCTCAGCAACACCAATATTGTCGACCACACTACGCACGATTTCAAGAAAGACGACGGGGTAA ]
[+] EMBL BE230165 [ GCTGCGGGCGGTGGAGGCAACGCCCGAGTCGTTCGCGCCGTTCGGCCAGGTCATCGCCGCCACACCCGACGGCGACGAGTTTGGCCCCCACGACGCCCAGCTCGACCTCACCCGCGGCATCCCAAGGTTCTACATCATGAGGTTGGAGAAGCGGCCGCTCGAGTTCTGGACGATCACCCACCACGCGAGCGTGACCCAGTGCCTCGGCTCCATCGGCGGCGAAGATTGGTACCTCGGCGTGGCCAAGCCCTCGATCGTGGAGGATGGGGCACACGAGCAGGGCGGCGATGGGAGGAAGCCCGTGCAGTCGCGTGCTGGCCACTACTACCTTCCTCCCTATCCAGCTGAAGTCTGCGTCTTCAGGGTTTCCGGCGCTAAGTTTCTGAAGCTGCACATCGGGACCT GCATGCGGGGCCGGAGTTCAAGGCGGATGCTGTGGATTTCTACAACCTGGAGCTCAGCAACACCAATATTGTCGACCACACTACGCACGATTTCAAGAAAGACGACGGGGTAA ]
consensusID : consensus_16224#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 584 fasta sequence
[ATTACCCTCACTAAGGGAATAGCTTGCGGCCTATCGAGTTCTGGACGATCACCCACCACGCGAGCGTGACCCAGTGCCTCG-GCTCCATCGGCGGCGAAGATTGGTACCTCG-GCGTGGCCAAGCCCTCGATCGTGGAGGATGGGGCACACGAGCAGGGCGGCGATGGGAGGAAGCCCGTGCAGTCGCGTGCTGGCCACTACTACCTTCCTCCCGATCCAGCTGAAGTCTGCGTCTTCAG-GGTTTCCGGCGCTAAGTTTCTGAAGCTGCACATCGGGACCTGGCATGCGGGGCCGCAGTTCA-AGGCGGATGCGGTGGATTTCTACAACC-TGGAGCTCA-GCAA-CACCAATA-TTGTCGACCAC-ACTACGCACGATTTCAAGAAAGACGACGGGGTA-ACTTTTGTGA-TT-GAGGA-CTGAGACACATTTCACAACCTAAGGCTGGGTAATGAA-T-ATGCTAGACTGTTTGCATGTCTTGGCTGTTTCCTGA-GTTTTTAATGAACAATCGATATGCAA-ATGTGATGTA-CAATATGCACATATGAGCTGCTTGTTTAAGTCATTGTAAAAAACAAAAAAAAAAAAAACAGAGCG]
[+] EMBL BI306170 [ATTACCCTCACTAAGGGAATAGCTTGCGGCCGCTCGAGTTCTGGACGATCACCCACCACGCGAGCGTGACCCAGTGCCTCG GCTCCATCGGCGGCGAAGATTGGTACCTCG GCGTGGCCAAGCCCTCGATCGTGGAGGATGGGGCACACGAGCAGGGCGGCGATGGGAGGAAGCCCGTGCAGTCGCGTGCTGGCCACTACTACCTTCCTCCCGATCCAGCTGAAGTCTGCGTCTTCAG GGTTTCCGGCGCTAAGTTTCTGAAGCTGCACATCGGGACCTGGCATGCGGGGCCGCAGTTCA AGGCGGATGCGGTGGATTTCTACAACC TGGAGCTCA GCAA CACCAATA TTGTCGACCAC ACTACGCACGATTTCAAGAAAGACGACGGGGTA ACTTTTGTGA TT GAGGA CTGAGACACATTTCACAACCTAAGGCTGGGTAATGAA T ATGCTAGACTGTTTGCATGTCTTGGCTGTTTCCTGA GTTTTTAATGAACAATCGATATGCAA ATGTGATGTA CAATATGCACATATGAGCTGCTTGTTTAAGTCATTGTAAAAAACAAAAAAAAAAAAAACAGAGCG]
[+] EMBL BU673062 [ AATAGCTT C GCCTATCGAGTTCTGGACGATCACCCACCACGCGAGCGTGACCCAGTGCCTCG GCTCCATCGGCGGCGAAGATTGGTACCTCG GCGTGGCCAAGCCCTCGATCGTGGAGGATGGGGCACACGAGCAGGGCGGCGATGGGAGGAAGCCCGTGCAGTCGCGTGCTGGCCACTACTACCTTCCTCCCGATCCAGCTGAAGTCTGCGTCTTCAG GGTTTCCGGCGCTAAGTTTCTGAAGCTGCACATCGGGACCTGGCATGCGGGGCCGCAGTTCA AGGCGGATGCGGTGGATTTCTACAACC TGGAGCTCA GCAA CACCAATA TTGTCGACCAC ACTACGCACGATTTCAAGAAAGACGACGGGGTA ACTTTTGTGA TT GAGGA CTGAGACACATTTCACAACCTAAGGCTGGGTAATGAA TAATGCTAGACTGTCTGCCTGTCTTGGCTGTTTCCTGA GTTTTTAATGAACAATCGATATGCAA ATGTGATGTA CAATATGCACATATGAGCTGCTTGTT ]
[+] EMBL BU673737 [ aCTTGCGG TTATCGAGTTCTGGACGATCACCCACCACGCGAGCGTGACCCAGTGCCTCG GCTCCATCGGCGGCGAAGATTGGTACCTCG GCGTGGCCAAGCCCTCGATCGTGGAGGATGGGGCACACGAGCAGGGCGGCGATGGGAGGAAGCCCGTGCAGTCGCGTGCTGGCCACTACTACCTTCCTCCCGATCCAGCTGAAGTCTGCGTCTTCAG GGTTTCCGGCGCTAAGTTTCTGAAGCTGCACATCGGGACCTGGCATGCGGGGCCGCAGTTCACCGGCGGATGCGGTGGATTTCTACACCC TGGAGCTCACGCAA CACCAATACTTGTCGACCAC ACTACGCACGATTTCACGAAAGACGACGGGGTACACTTTTGTGACTT GAGGACCTGAGACACATTTCACAACCTAAGGCTGGGTAATGAACT ATGCTAGACTGTTTGCATGTCTTGGCTGTTTCCTGACGTTTTTAATGAACAATCGATATGCAA ATGTGATGTA CAATATGCACATATGAGCTGCTTGT ]
[+] EMBL CB964983 [ CTGGACGATCACCCACCACGCGAGCGTGACCCAGTGCCTCG GCTCCATCGGCGGCGAAGA TGGTACCTCG GCGTGGCCAAGCCCTCGATCGTGGAGGATGGGGCACACGAGCAGGGCGGCGATGGGAGGAAGCCCGTGCAGTCGCGTGCTGGCCACTACTACCTTCCTCCCGATCCAGCTGAAGTCTGCGTCTTCAG GGTTTCCGGCGCTAAGTTTCTGAAGCTGCACATCGGGACCTGGCATGCGGGGCCGCAGTTCA AGGCGGATGCGGTGGATTTCTACAACC TGGAGCTCA GCAA CACCAATA TTGTCGACCAC ACTACGCACGATTTCAAGAAAGACGACGGGGTA ACTTTTGTGA TT GAGGA CTGAGACACATTTCACAACCTAAGGCTGGGTAATGAA T ATGCTAGACTGTTTGCATGTCTTGGCTGTTTCCTGA GTTTTTAATGAACAATCGATATGCAA CTGTGATGTA CAATATGCACATATGAGCTGCTTGT ]
[+] EMBL AU070479 [ CTGGACGATCACCCACCACGCGAGCGTGACCCAGTGCCTCG GCTCCATCGGCGGCGAAGATTGGTACCTCG GCGTGGCCAAGCCCTCGATCGTGGAGGATGGGGCACACGAGCAGGGC GCGATGGGAGGAAGCCCGTGCAGTCGCGTGCTGGCCACTACTACCTTCCTCCCGATCCAGCTGAAGTCTGCGTCTTCAG GGTTTCCGGCGCTAAGTTTCTGAAGCTGCACATCGGGACCTGGCATGCGGGGCCGCAGTTCA AGGCGGATGCGGTGGATTTCTACAACCTTGGAGCTCA GCAAGCACCAATA TTGTCGACCACNACTACGCACGATTTCAAGAAAGACGACGGGGTA ACTTTTGTGA TTCGAGGA CTGATACACATTTCACA ]
[+] EMBL CB967159 [ CTGGACGATCACCCACCACGCGAGCGTGACCCAGTGCCTCG GCTCCATCGGCGGCGAAGATTGGTACCTCG GCGTGGCCAAGCCCTCGATCGTGGAGGATGGGGCACACGAGCAGGGCGGCGATGGGAGGAAGCCCGTGCAGTCGCGTGCTGGCCACTACTACCTTCCTCCCGATCCAGCTGAAGTCTGCGTCTTCAG GGTTTCCGGCGCTAAGTTTCTGAAGCTGCACATCGGGACCTGGCATGCGGGGCCGCAGTTCA AGGCGGATGCGGTGGATTTCTACAACC TGGAGCTCA GCAA CACCAATA TTGTCGACCAC ACTACGCACGATTTCAAGAAAGACGACGGGGTA ACTTTTGTGA TT GAGGA CTGAGACACATTTCACAACCTAAGGCTGGGTAATGAA T ATGCTAGACTGTTTGCATGTCTTGGCTGTTTCCTGA GTTTTTAATGAACAATCGATATGCAA ATGTGATGTA CAATATGCACATATGAGCTGCTTGTT ]
[+] EMBL BU672999 [ CTGGACGATCACCCACCACGCGAGCGTGACCCAGTGCCTCG GCTCCATCGGCGGCGAAGATTGGTACCTCG GCGTGGCCAAGCCCTCGATCGTGGAGGATGGGGCACACGAGCAGGGCGGCGATGGGAGGAAGCCCGTGCAGTCGCGTGCTGGCCACTACTACCTTCCTCCCGATCCAGCTGAAGTCTGCGTCTTCAG GGTTTCCGGCGCTAAGTTTCTGAAGCTGCACATCGGGACCTGGCATGCGGGGCCGCAGTTCA AGGCGGATGCGGTGGATTTCTACAACC TGGAGCTCA GCAA CACCAATA TTGTCGACCAC ACTACGCACGATTTCAAGAAAGACGACGGGGTA ACTTTTGTGA TT GAGGA CTGAGACACATTTCACAACCTAAGGCTGGGTAATGAA T ATGCTAGACTGTTTGCATGTCTTGGCTGTTTCCTGA GTTTTTAATGAACAATCGATATGCAA ATGTGATGTA CAATATGCACATATGAGCTGCTTGT ]
[+] EMBL BU673548 [ TGGACGATCACCCACCACGCGAGCGTGACCCAGTGCCTCG GCTCCATCGGCGGCGAAGATTGGTACCTCG GCGTGGCCAAGCCCTCGATCGTGGAGGATGGGGCACACGAGCAGGGCGGCGATGGGAGGAAGCCCGTGCAGTCGCGTGCTGGCCACTACTACCTTCCTCCCGATCCAGCTGAAGTCTGCGTCTTCAG GGTTTCCGGCGCTAAGTTTCTGAAGCTGCACATCGGGACCTGGCATGCGGGGCCGCAGTTCA AGGCGGATGCGGTGGATTTCTACAACC TGGAGCTCA GCAA CACCAATA TTGTCGACCAC ACTACGCACGATTTCAAGAAAGACGACGGGGTA ACTTTTGTGA TT GAGGA CTGAGACACATTTCACAACCTAAGGCTGGGTAATGAA T ATGCTAGACTGTTTGCATGTCTTGGCTGTTTCCTGA GTTTTTAATGAACAATCGATATGCAA ATGTGATGTA CAATATGCACATATGAGCTGCTTGT ]
[+] EMBL CB965925 [ ctTGGACGATCACCCACCACGCGAGCGTGACCCAGTGCCTCG GCTCCATCGGCGGCGAAGATTGGTACCTCG GCGTGGCCAAGCCCTCGATCGTGGAGGATGGGGCACACGAGCAGGGCGGCGATGGGAGGAAGCCCGTGCAGTCGCGTGCTGGCCACTACTACCTTCCTCCCGATCCAGCTGAAGTCTGCGTCTTCAG GGTTTCCGGCGCTAAGTTTCTGAAGCTGCACATCGGGACCTGGCATGCGGGGCCGCAGTTCA AGGCGGATGCGGTGGATTTCTACAACC TGGAGCTCA GCAA CACCAATA TTGTCGACCAC ACTACGCACGATTTCACGAAAGACGACGGGGTA CCTTCTGTGA TT GCGGA CTGAGACACATTTCACAACCTAAGGCTGGGTAATGCA T CTGCTAGACTGATTGCATGTCTTGGCTGTATCCTGA GATACTCATGCACAATCGATATGCAACATGTGATGTACCAATA ]
[+] EMBL CB967011 [ GGACGATCACCCACCACGCGAGCGT ACCCCCTGCCTCG ATTCCATCGGCGGCGAAGATTGGTACCTCG GCGTGG CAAGCCCTCGATCGTGGAGGATGGGGCACACGAGCAGGGCGGCGATGGGAGGAAGCCCGTGCAGTCGCGTGCTGGCCACTACTACCTTCCTCCCGATCCAGCTGAAGTCTGCGTCTCCAG GGTTTCCGGCGCTAAGTTTCTGAAGCTGCACATCGGGACCTGGCATGCGGGGCCGCAGTTCA AGGCGGATGCGGTGGATTTCTACAACC TGGAGCTCA GCAA CACCAATA TTGTCGACCAC ACTACGCACGATTTCAAGAAAGACGACGGGGTA ACTTTTGTGA TT GAGGA CTGAGACACATTTCACAACCTAAGGCTGGGTAATGAA T ATGCTAGACTGTTTGCATGTCTTGGCTGTTTCCTGA GTTTTTAATGAACAATCGATATGCAA ATGTGATGTA CAATATGCACATATGAGCTGCTTGT ]
[+] EMBL BI306650 [ GACGATCACCCACCACGCGAGCGTGACCCAGTGCCTCG GCTCCATCGGCGGCGAAGATTGGTACCTCG GCGTGGCCAAGCCCTCGATCGTGGAGGATGGGGCACACGAGCAGGGCGGCGATGGGAGGAAGCCCGTGCAGTCGCGTGCTGGCCACTACTACCTTCCTCCCGATCCAGCTGAAGTCTGCGTCTTCAG GGTTTCCGGCGCTAAGTTTCTGAAGCTGCACATCGGGACCTGGCATGCGGGGCCGCAGTTCA AGGCGGATGCGGTGGATTTCTACAACC TGGAGCTCA GCAA CACCAATA TTGTCGACCAC ACTACGCACGATTTCAAGAAAGACGACGGGGTA ACTTTTGTGA TT GAGGA CTGAGACACATTTCACAACCTAAGGCTGGGTAATGAA T ATGCTAGACTGTTTGCATGTCTTGGCTGTTTCCTGA GTTTTTAATGAACAATCGATATGCAA ATGTGATGTA CAATATGCACATATGAGCTGCTTGTTTAAGTCATTGTAAAAAACAAAAAAAAAAAAAACAGAGCG]
[+] EMBL BI306196 [ GACGATCACCCACCACGCGAGCGTGACCCAGTGCCTCG GCTCCATCGGCGGCGAAGATTGGTACCTCG GCGTGGCCAAGCCCTCGATCGTGGAGGATGGGGCACACGAGCAGGGCGGCGATGGGAGGAAGCCCGTGCAGTCGCGTGCTGGCCACTACTACCTTCCTCCCGATCCAGCTGAAGTCTGCGTCTTCAG GGTTTCCGGCGCTAAGTTTCTGAAGCTGCACATCGGGACCTGGCATGCGGGGCCGCAGTTCA AGGCGGATGCGGTGGATTTCTACAACC TGGAGCTCA GCAA CACCAATA TTGTCGACCAC ACTACGCACGATTTCAAGAAAGACGACGGGGTA ACTTTTGTGA TT GAGGA CTGAGACACATTTCACAACCTAAGGCTGGGTAATGAA T ATGCTAGACTGTTTGCATGTCTTGGCTGTTTCCTGA GTTTTTAATGAACAATCGATATGCAA ATGTGATGTA CAATATGCACATATGAGCTGCTTGTTTAAGTCATTGTAAAAAACAAAAAAAAAAAAAACAGAGCG]
[+] EMBL BU673556 [ ACAATCACCCACCACGCGAGCGTGACCCAGTGCCTCGTGCTCCATCGGCGGAGAAGATTGGTACCTCGAGCGTGGCCTAGCCCTCGATCGTGGAGGATGGGGCACACGAGCAGGGCGGTGATGGGAGGAAGCCCGTGCAGTCGCGTGCTGGCCACTACTACCTTCCTCCCGATCCAGCTGAAGTCTGCGTCTTCAGTGGTTTCCGGCGCTAAGTTTCTGAAGCTGCACATCGGGACCTGGCATGCGGGGCCGCAGTTCA AGGCGGATGCGGTGGATTTCTACAACCGTGGAGCTCA GCAA GACCAATA TTGTCGAGCACGACTACGCACGATTTCCAGAAAGACGACGGGGTA ACTTTTGTGA TT GAGGA CTGAGACACATTGCACAACCTAGGGCTGGGTAATGAA T ATGCTAGACTGTTTGCATGTCTTGGCTGTTTCCTGA GTTTTTAATGAACAATCGATATGCAG ATGTGATGTA CAATATGCACATATGAGCTGCTTGT ]
[+] EMBL CB964712 [ GATCACCCACCACGCGAGCGTGACCCAG GCCTCG GCT CATCGGCGGCGAAGA TGGTACCTCG GCGTGGCCAAGCCCTCGATCGTGGAGGATGGGGCACACGAGCAGGGCGGCGATGGGAGGAAGCCCGTGCAGTCGCGTGCTGGCCACTACTACCTTCCTCCCGATCCAGCTGAAGTCTGCGTCTTCAG GGTTTCCGGCGCTAAGTTTCTGAAGCTGCACATCGGGACCTGGCATGCGGGGCCGCAGTTCA AGGCGGATGCGGTGGATTTCTACAACC TGGAGCTCA GCAA CACCAATA TTGTCGACCAC ACTACGCACGATTTCAAGAAAGACGACGGGGTA ACTTTTGTGA TT GAGGA CTGAGACACATTTCACAACCTAAGGCTGGGTAATGAA T ATGCTAGACTGTTTGCATGTCTTGGCTGTTTCCTGA GTTTTTAATGAACAATCGATATGCAA ATGTGATGTA CAATATGCACATATGAGCTGCTTGT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_16224#0 ------------------------------------------------------------
consensus_16224#2 ------------------------------------------------------------
consensus_16224#1 GCCGCTCGACGATCGATGCAGGCGATTCGCCCGGGCCGTTCGTGCCGCCTGGGCCGTTCC 60
consensus_16224#0 -------------------------------CTGATCCACTCCATCGCCA-ATTCGCCGT 28
consensus_16224#2 ------------------------------------------------------------
consensus_16224#1 TGCGGCCGCGACGGCGTCTCCTCCCGCTGCCTTGCTCGGCTCCACCGTAGCAGCGGCAGT 120
consensus_16224#0 ATCAACTCACCAACTGGGGAAAACGCCGAAGTCGAGGAGGGGAGGCCGCCCGGTCCGCGC 88
consensus_16224#2 ------------------------------------------------------------
consensus_16224#1 AGCAACGGGGGCGGAGGAGCAGTGAGGTGCGCGAAGGCAGCCGCGCAGTCGATGGAGGCC 180
consensus_16224#0 GCGATGGCCATGGAGGGGGTGAGGGTGGTGACGCTGCGGGCGGTGGAGGCCACGCCCGAG 148
consensus_16224#2 ------------------------------------------------------------
consensus_16224#1 GTGAAGAAGGACGAGGAGGCGAGGGTGGTGGCGCTGCGGGCGGTGGAGGCAACGCCCGAG 240
consensus_16224#0 TCCTTCGCGCCGTTCGGCCAGGTCGTCGCCGCCTACGGCNAAAGCGC----TTCGGTCCC 204
consensus_16224#2 ------------------------------------------------------------
consensus_16224#1 TCGTTCGCGCCGTTCGGCCAGGTCATCGCCGCCACACCCGACGGCGACGAGTTTGGCCCC 300
consensus_16224#0 AACGATGCCCAGCTCGACCTCAGCCGCGGCGTCCCAAGGTTCTACATCATGAGGTTGGAG 264
consensus_16224#2 ------------------------------------ATTACCCTCACTAAGGGAATAGCT 24
consensus_16224#1 CACGACGCCCAGCTCGACCTCACCCGCGGCATCCCAAGGTTCTACATCATGAGGTTGGAG 360
* * ** * * * * *
consensus_16224#0 AAGCGGCCGCTCAAGTTCTGGACGATCACCCACCACGCGAGCGTGACCCAGTGCCTCGGC 324
consensus_16224#2 T-GCGGCCTATCGAGTTCTGGACGATCACCCACCACGCGAGCGTGACCCAGTGCCTCGGC 83
consensus_16224#1 AAGCGGCCGCTCGAGTTCTGGACGATCACCCACCACGCGAGCGTGACCCAGTGCCTCGGC 420
****** ** ***********************************************
consensus_16224#0 TCCATCGGCGGCGAAGATTGGTACCTCGGCGTGGCCAAGCCCTCGATCGTGGAGGATGGG 384
consensus_16224#2 TCCATCGGCGGCGAAGATTGGTACCTCGGCGTGGCCAAGCCCTCGATCGTGGAGGATGGG 143
consensus_16224#1 TCCATCGGCGGCGAAGATTGGTACCTCGGCGTGGCCAAGCCCTCGATCGTGGAGGATGGG 480
************************************************************
consensus_16224#0 GCACACGAGCAGGGCGGCGATGGGAGGAAGCCCGTGCAGTCGCGTGCTGGCCACTACTAC 444
consensus_16224#2 GCACACGAGCAGGGCGGCGATGGGAGGAAGCCCGTGCAGTCGCGTGCTGGCCACTACTAC 203
consensus_16224#1 GCACACGAGCAGGGCGGCGATGGGAGGAAGCCCGTGCAGTCGCGTGCTGGCCACTACTAC 540
************************************************************
consensus_16224#0 CTTCCTCCCGATCCAGCTGAAGTCTGCGTCTTCAGGGTTTCCGGCGCTAAGTTTCTGAAG 504
consensus_16224#2 CTTCCTCCCGATCCAGCTGAAGTCTGCGTCTTCAGGGTTTCCGGCGCTAAGTTTCTGAAG 263
consensus_16224#1 CTTCCTCCCGATCCAGCTGAAGTCTGCGTCTTCAGGGTTTCCGGCGCTAAGTTTCTGAAG 600
************************************************************
consensus_16224#0 CTGCACATCGGGACCTGGCATGCGGGGCCGCAGTTCAAGGCGGATGCGGTGGATTTCTAC 564
consensus_16224#2 CTGCACATCGGGACCTGGCATGCGGGGCCGCAGTTCAAGGCGGATGCGGTGGATTTCTAC 323
consensus_16224#1 CTGCACATCGGGACCTGGCATGCGGGGCCGCAGTTCAAGGCGGATGCGGTGGATTTCTAC 660
************************************************************
consensus_16224#0 AACCTGGAGCTCAGCAACACCAATATTGTCGACCACACTACGCACGATTTCAAGAAAGAC 624
consensus_16224#2 AACCTGGAGCTCAGCAACACCAATATTGTCGACCACACTACGCACGATTTCAAGAAAGAC 383
consensus_16224#1 AACCTGGAGCTCAGCAACACCAATATTGTCGACCACACTACGCACGATTTCAAGAAAGAC 720
************************************************************
consensus_16224#0 GACGGGGTAACTTTTGTGATTGAGGACTGAGACACATTTCACAACCTAAGGCTGGGTAAT 684
consensus_16224#2 GACGGGGTAACTTTTGTGATTGAGGACTGAGACACATTTCACAACCTAAGGCTGGGTAAT 443
consensus_16224#1 GACGGGGTAACTTTTGTGATTGAGGACTGAGACACATTTCACAACCTAAGGCTGGGTAAT 780
************************************************************
consensus_16224#0 GAATATGCTAGACTGTTTGCATGTCTTGTCTGTTTCCTGAGTTTTTAATGAACAATCGAT 744
consensus_16224#2 GAATATGCTAGACTGTTTGCATGTCTTGGCTGTTTCCTGAGTTTTTAATGAACAATCGAT 503
consensus_16224#1 GAATATGCTAGACTGGTTGCATGT------------------------------------ 804
*************** ********
consensus_16224#0 ATGCAAATGTGATGTACAATATGCACATATGAGCTGCTTGTTCAAGTCATTGTAAAAAAC 804
consensus_16224#2 ATGCAAATGTGATGTACAATATGCACATATGAGCTGCTTGTTTAAGTCATTGTAAAAAAC 563
consensus_16224#1 ------------------------------------------------------------
consensus_16224#0 AAATTAAGAAAAAAGAGGCAAGGGGAGTCTCTAGTGGGTACACCCAAAAGGGCAAAAAGC 864
consensus_16224#2 AAAAAAAAAAAAAACAGAGCG--------------------------------------- 584
consensus_16224#1 ------------------------------------------------------------
consensus_16224#0 CGTCCAGTATGAAATGATGTTGCTCTTTTCTGAAAACAATATGAATGATTTGAGTCAATA 924
consensus_16224#2 ------------------------------------------------------------
consensus_16224#1 ------------------------------------------------------------
consensus_16224#0 AGTGATGTATTTCCAGAGAGAGAACTATCAGACAATGG 962
consensus_16224#2 --------------------------------------
consensus_16224#1 --------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||