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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16289#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 1419 fasta sequence
[CTGGACTGAAGGAGTAGATCGTCCACACACTCATGAATCATCGCTCACTCAAACAGCCTTGCCTCCTCCTGTTGAGTTGACCCGATCCCATCCGGTGTTATCCATCCCTTCCCTGATCCCCCATCCATCGCCGCCGCCGCCGCCGCCGTGGAGACGATGACGAC--GACGAAGAAGAAGCTCGTCATCGACACCGACCCGGGAATCGATGACGCCATGGCCATCTTCGTGGCGCTGAGGTCGCCGGAGGTGGAGCTGCTGGGCCTCACCACCATCTTCGGCAACGTCTACACCACCCTCGCCACCCGCAACGCCCTCCACCTGCTGGAGGCTGTTGGGAGGAC-TGACATCCCCGTGGCAGAGGGATCCCATGTAACAATCAAGAAAGCCACCAAGCTAC-GGATTGCGAGCTTTGTTCATGGCTCGGATGGTCTAGGAAATCAGAACTTTCCTCCGCCAACTGGGAAGCCCTTAGATCAATCGGCCGCCGCGTTTCTTGTCGAGCAGGCAAATCTGTACCCTGGACAAGTTACT-GTGGTT-GCCCTTGGTCCACTTACCAACCTAGCTTTGGCTATAGAACTTGATCCTTCTTTCCCGAAGAAGATTGGGCAGATTGTGATCCTTGGTGGTGCGTATTCAGTTAATGGAAATGTCAACCCTGCAGCTGAGGCAAATATA-TTTGGTGACCCTGATGCAGCTGATATAGTTTTCACCTCCGGTGCTGATATTTTGGCTGTGGGAATAAATATTACACACCAAGTAGTTCTTTCTGATGCTGACCGGGAAAAGCTTGAACAGTCTGATAGCAAATATGCCCGATACTTGAGCAAGATCCTGGGTCTTTATTATGATTACCACAAGGACGCCTACTTCATAAAAGGAGTGTATCTTCACGATCCAGCAACACTTATTGCTGCGGTAGATCCGTCACTGATGACTTACACGG-AAGGTGTAGTGAGGGTGCAGACTGATGGCATCACAAAGGGTCTCACAGTTTTCGACACA-ACCAAGAAAAGGTA-TGGGGAGATAACTGCGTGGACCGGTAAGCCAACCGTGAAG-GTTGCTGTG-ACCGTTGATGCTCCTGCCG-TTGTGGAGA-TGA-TCATGCAG-AGGC-TTACGACGGA-TGATTAGCAGC-AGCAGCAGCAGC-AGCAG-CAAGCAAGCAG-CCAAGGGAAAAACGCTGCCTTTGTCTTG-TTGAACCTGTCGGATCTTATAAAGAATAGACAATGCTGTATATCCTAAATTCTGAAGAATTTGCTTTACATGATTCGTCGTCGAGGTTGATCAACATCACACAGAACTAGCTAGAAACAGCCTGATGCACTGATTCAGAGGTTGACAATCCATTTCAATTTTATGGCCAGAATTCATACTACAAAAAGTAAATTTCAGAAAGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF337961 [CTGGACTGAAGGAGTAGAAAGTCCACACACTCATGAATCATCGCTCACTCAAACAGCCTTGCCTCCTCCTGTTGAGTTGACCCGATCCCATCCGGTGTTATCCATCCCTTCCCTGATCCCCCATCCATCGCCGCCGCCGCCGCCGCCGTGGAGACGATGACGAC GACGAAGAAGAAGCTCGTCATCGACACCGACCCGGGAATCGATGACGCCATGGCCATCTTCGTGGCGCTGAGGTCGCCGGAGGTGGAGCTGCTGGGCCTCACCACCATCTTCGGCAACGTCTACACCACCCTCGCCACCCGCAACGCCCTCCACCTGCTGGAGGCTGTTGGGAGGAC TGACATCCCCGTGGCAGAGGGATCCCATGTAACAATCAAGAAAGCCACCAAGCTAC GGATTGCGAGCTTTGTTCATGGCTCGGATGGTCTAGGAAATCAGAACTTTCCTCCGCCAACTGGGAAGCCCTTAGATCAATCGGCCGCCGCGTTTCTTGTCGAGCAGGCAAATCTGTACCCTGGACAAGTTACTGGTGGTTGGCCCTTGGTCCACTTACCAACCTAGCTTTGGCTATAGAACTTG ]
[+] EMBL AK101293 [ cTCGTCCACACACTCATGAATCATCGCTCACTCAAACAGCCTTGCCTCCTCCTGTTGAGTTGACCCGATCCCATCCGGTGTTATCCATCCCTTCCCTGATCCCCCATCCATCGCCGCCGCCGCCGCCGCCGTGGAGACGATGACGACGAGACGAAGAAGAAGCTCGTCATCGACACCGACCCGGGAATCGATGACGCCATGGCCATCTTCGTGGCGCTGAGGTCGCCGGAGGTGGAGCTGCTGGGCCTCACCACCATCTTCGGCAACGTCTACACCACCCTCGCCACCCGCAACGCCCTCCACCTGCTGGAGGCTGTTGGGAGGAC TGACATCCCCGTGGCAGAGGGATCCCATGTAACAATCAAGAAAGCCACCAAGCTAC GGATTGCGAGCTTTGTTCATGGCTCGGATGGTCTAGGAAATCAGAACTTTCCTCCGCCAACTGGGAAGCCCTTAGATCAATCGGCCGCCGCGTTTCTTGTCGAGCAGGCAAATCTGTACCCTGGACAAGTTACT GTGGTT GCCCTTGGTCCACTTACCAACCTAGCTTTGGCTATAGAACTTGATCCTTCTTTCCCGAAGAAGATTGGGCAGATTGTGATCCTTGGTGGTGCGTATTCAGTTAATGGAAATGTCAACCCTGCAGCTGAGGCAAATATA TTTGGTGACCCTGATGCAGCTGATATAGTTTTCACCTCCGGTGCTGATATTTTGGCTGTGGGAATAAATATTACACACCAAGTAGTTCTTTCTGATGCTGACCGGGAAAAGCTTGAACAGTCTGATAGCAAATATGCCCGATACTTGAGCAAGATCCTGGGTCTTTATTATGATTACCACAAGGACGCCTACTTCATAAAAGGAGTGTATCTTCACGATCCAGCAACACTTATTGCTGCGGTAGATCCGTCACTGATGACTTACACGG AAGGTGTAGTGAGGGTGCAGACTGATGGCATCACAAAGGGTCTCACAGTTTTCGACACA ACCAAGAAAAGGTA TGGGGAGATAACTGCGTGGACCGGTAAGCCAACCGTGAAG GTTGCTGTG ACCGTTGATGCTCCTGCCG TTGTGGAGA TGA TCATGCAG AGGC TTACGACGGA TGATTAGCAGC AGCAGCAGCAGC AGCAG CAAGCAAGCAG CCAAGGGAAAAACGCTGCCTTTGTCTTG TTGAACCTGTCGGATCTTATAAAGAATAGACAATGCTGTATATCCTAAATTCTGAAGAATTTGCTTTACATGATTCGTCGTCGAGGTTGATCAACATCACACAGAACTAGCTAGAAACAGCCTGATGCACTGATTCAGAGGTTGACAATCCATTTCAATTTTATGGCCAG ]
[+] EMBL CF294172 [ TCGTCCACACACTCATGAATTATCGCTCACTCAAACAGCCTTGCCTCCTCCTGTTGAGTTGACCCGATCCCATCCGGTGTTATCCATCCCTTCCCTGATCCCCCATCCATCGCCGCCGCCGCCGCCGCCGTGGAGACGATGACGAC GACTTTTAAGAAGCTCGTCATCGACTCCGACCCGGGAATCGATGACGCCATGGCCATCTTCGTGGCGCTGAGGTCGCCGGAGGTGGAGCTGCTGGGCCTCACCACCATCTTCGGCAACGTCTACACCACCCTCGCCACCCGCAACGCCCTCCACCTGCTGGAGGCTGTTGGGAGGAC TGACATCCCCGTGGCAGAGGGATCCCAT ]
[+] EMBL CF294814 [ ACACACTCATGAATCATCGCTCACTCAAACAGCCTTGCCTCCTCCTGTTGAGTTGACCCGATCCCATCCGGTGTTATCCATCCCTTCTCTGATCCCCCATCCATCGCCGCCGCCGCCGCCGCCGTGGAGACGATGATGTC TACGAAGAAGAAGCTCGTCATTTACACCGACCCGGGAATCGATGACGCCATGGCCATCTCCGTGGCGCTGAGGTCGCCGGAGGTGGAGCTGCTGGGCCTCACCACCATCTTCGGCAACGTCTACACCACCCTCGCCACCCGCAACGCCCTCCACCTGCTGGAGGCTGTTGGGAGGAC TGACATCCCCGTGGCAGAGGGATCCCATGTAACAATCAAGAAAGCCACCAAGCTAC GGATTGCGAGCTTTGTTCATGGCTCGGATGGTCTAGGAAATCAGAACTTTCCTCCGCCAACTGGGAAGCCCTTAGATCAATCGGCCGCCGCGTTTCTTGTCGAGCAGGCAAATCTGTACCCTGGACAAGTTACT GTGGTT GCCCTTGGTCCACTTACCAACCTAGCTTTGGCTATAGAACTTGATCCTTCTTTCCCGAAGAAGATTGGGCAGATTGTGATCCTTGGTGGTGCGTATTCAGTTAATGGAAATGTCAACCCTGCAGCTGAGGCAAATATATTTTGGTGACCCTGA ]
[+] EMBL AK061895 [ GCCTTGCCTCCTCCTGTTGAGTTGACCCGATCCCATCCGGTGTTATCCATCCCTTCCCTGATCCCCCATCCATCGCCGCCGCCGCCGCCGCCGTGGAGACGATGACGAC GACGAAGAAGAAGCTCGTCATCGACACCGACCCGGGAATCGATGACGCCATGGCCATCTTCGTGGCGCTGAGGTCGCCGGAGGTGGAGCTGCTGGGCCTCACCACCATCTTCGGCAACGTCTACACCACCCTCGCCACCCGCAACGCCCTCCACCTGCTGGAGGCTGTTGGGAGGAC TGACATCCCCGTGGCAGAGGGATCCCATGTAACAATCAAGAAAGCCACCAAGCTAC GGATTGCGAGCTTTGTTCATGGCTCGGATGGTCTAGGAAATCAGAACTTTCCTCCGCCAACTGGGAAGCCCTTAGATCAATCGGCCGCCGCGTTTCTTGTCGAGCAGGCAAATCTGTACCCTGGACAAGTTACT GTGGTT GCCCTTGGTCCACTTACCAACCTAGCTTTGGCTATAGAACTTGATCCTTCTTTCCCGAAGAAGATTGGGCAGATTGTGATCCTTGGTGGTGCGTATTCAGTTAATGGAAATGTCAACCCTGCAGCTGAGGCAAATATA TTTGGTGACCCTGATGCAGCTGATATAGTTTTCACCTCCGGTGCTGATATTTTGGCTGTGGGAATAAATATTACACACCAAGTAGTTCTTTCTGATGCTGACCGGGAAAAGCTTGAACAGTCTGATAGCAAATATGCCCGATACTTGAGCAAGATCCTGGGTCTTTATTATGATTACCACAAGGACGGCTACTTCATAAAAGGAGTGTATCTTCACGATCCAGCAACACTTATTGCTGCGGTAGATCCGTCACTGATGACTTACACGG AAGGTGTAGTGAGGGTGCAGACTGATGGCATCACAAAGGGTCTCACAGTTTTCGACACA ACCAAGAAAAGGTA TGGGGAGATAACTGCGTGGACCGGTAAGCCAACCGTGAAG GTTGCTGTG ACCGTTGATGCTCCTGCCG TTGTGGAGA TGA TCATGCAG AGGC TTACGACGGA TGATTAGCAGC AGCAGCAGCAGC AGCAG CAAGCAAGCAG CCAAGGGAAAAACGCTGCCTTTGTCTTG TTGAACCTGTCGGATCTTATAAAGAATAGACAATGCTGTATATCCTAAATTCTGAAGAATTTGCTTTACATGATTCGTCGTCGAGGTTGATCAACATCACACAGAACTAGCTAGAAACAGCCTGATGCACTGATTCAGAGGTTGACAATCCATTTCAATTTTATGGCCAGAA ]
[+] EMBL CB644853 [ ACCCCTTCCCATCCGGTGTTATCCATCCCTTCCCTGATCCCCCATCCATCGCCGCCGCCGCCGCCGCCGTGGAGACCATGACGAC GACGAAGAAGAAGCTCGTCATCGACACCGACCCGGGAATCGATGACGCCATGGCCATCTTCGTGGCGCTGAGGTCGCCGGAGGTGGAGCTGCTGGGCCTCACCACCATCTTCGGCAACGTCTACACCACCCTCGCCACCCGCAACGCCCTCCACCTGCTGGAGGCTGTTGGGAGGAC TGACATCCCCGTGGCAGAGGGATCCCATGTAACAATCAAGAAAGCCACCAAGCTAC GGATTGCGAGCTTTGTTCATGGCTCGGATGGTCTAGGAAATCAGAACTTTCCTCCGCCAACTGGGAAGCCCTTAGATCAATCGGCCGCCGCGTTTCTTGTCGAGCAGGCAAATCTGTACCCTGGACAAGTTACT GTGGTT GCCCTTGGTCCACTTACCAACCTAGCTTTGGCTATAGAACTTGATCCTTCTTTCCCGAAGAAGATTGGGCAGATTGTGATCCTTGGTGGTGCGTATTCAGTTAATGGAAATGTCAACCCTGCAGCTGAGGCAAATATA TTTGGTGACCCTGATGCAGCTGATATAGTTTTCACCTCCGGTGCTGATATTTTGGCTGTGGGAATAAATATTACACACCAAGTAGTTCTTTCTGATGCTGACCGGGAAAAGCTTGAACAGTCTGATAGCAAATATGCCCGATACTTGAGCAAGATCCTGGGTCTTTATTATGATTACCACAAGGACGCCTACTTCATAAAAGGAGTGTATCTTCACGATCCAGCAACACTTATTGCTGCGGTAGATCC ]
[+] EMBL C72915 [ TTATCCATCCCTTCCCTGATCCCCCATCCATCGCCGCCGCCGCCGCCGCCGTGGAGACGATGACGAC GACGAAGAAGAAGCTCGTCATCGACACCGACCCGGGAATCGATGACGCCATGGCCATCTTCGTGGCGCTGAGGTCGCCGGAGGTGGAGCTGCTGGGCCTCACCACCATCTTCGGCAACGTCTACACCACCCTCGCCACCCGCAACGCCCTCCACCTGCTGGAGGCTGTTGGGAGGAC TGACATCCCCGTGGCAGAGGGATCCCATGTAACAATCAAGAAAGCCACCAAGCTAC GGATTGCGAGCTTTGTTCATGGCTCGGATGGTCTAGGAAATCAGAACTTTTCTCCG CAACTTGGAAG CCTTAGATCAATCGGCCGCCGCGTTTTTTGTCGAGCAGGCAAATCTGTACCgngg ]
[+] EMBL CB679008 [ GATCCCCCATCCATCGCCGCCGCCGCCGCCGCCGTGGAGACGATGACGAC GACGAAGAAGAAGCTCGTCATCGACACCGACCCGGGAATCGATGACGCCATGGCCATCTTCGTGGCGCTGAGGTCGCCGGAGGTGGAGCTGCTGGGCCTCACCACCATCTTCGGCAACGTCTACACCACCCTCGCCACCCGCAACGCCCTCCACCTGCTGGAGGCTGTTGGGAGGAC TGACATCCCCGTGGCAGAGGGATCCCATGTAACAATCAAGAAAGCCACCAAGCTAC GGATTGCGAGCTTTGTTCATGGCTCGGATGGTCTAGGAAATCAGAACTTTCCTCCGCCAACTGGGAAGCCCTTAGATCAATCGGCCGCCGCGTTTCTTGTCGAGCAGGCAAATCTGTACCCTGGACAAGTTACT GTGGTT GCCCTTGGTCCACTTACCAACCTAGCTTTGGCTATAGAACTTGATCCTTCTTTCCCGAAGAAGATTGGGCAGATTGTGATCCTTGGTGGTGCGTATTCAGTTAATGGAAATGTCAACCCTGCAGCTGAGGCAAATATA TTTGGTGACCCTGATGCAGCTGATATAGTTTTCACCTCCGGTGCTGATATTTTGGCTGTGGGAATAAATATTACACACCAAGTAGTTCTTTCTGATGCTGACCGGGAAAAGCTTGAACAGTCTGATAGCAAATATGCCCGATACTTGAGCAAGATCCTGGGTCTTTATTATGATTACCACAAAGACGCCTACTTCATAAAAGGAGTGTATCT ]
[+] EMBL AU065757 [ CCGCCGCCGTGGAGACGATGACGAC GACGAAGAAGAAGCTCGTCATCGACACCGACCCGGGAATCGATGACGCCATGGCCATCTTCGTGGCGCTGAGGTCGCCGGAGGTGGAGCTGCTGGGCCTCACCACCATCTTCGGCAACGTCTACACCACCCTCGCCACCCGCAACGGCCTCCACCTGCTGGAGGCTGTTGGGAGGACTTGACATCCCCGTGGCAGAGGGATNCCATGTAACAATCAAGAAAGNCACCAAGCTACGGGATTt ]
[+] EMBL CB664751 [ AC GACGAAGAAGAAGCTCGTCATCGACACCGACCCGGGAATCGATGACGCCATGGCCATCTTCGTGGCGCTGAGGTCGCCGGAGGTGGAGCTGCTGGGCCTCACCACCATCTTCGGCAACGTCTACACCACCCTCGCCACCCGCAACGCCCTCCACCTGCTGGAGGCTGTTGGGAGGAC TGACATCCCCGTGGCAGAGGGATCCCATGTAACAATCAAGAAAGCCACCAAGCTAC GGATTGCGAGCTTTGTTCATGGCTCGGATGGTCTAGGAAATCAGAACTTTCCTCCGCCAACTGGGAAGCCCTTAGATCAATCGGCCGCCGCGTTTCTTGTCGAGCAGGCAAATCTGTACCCTGGACAAGTTACT GTGGTT GCCCTTGGTCCACTTACCAACCTAGCTTTGGCTATAGAACTTGATCCTTCTTTCCCGAAGAAGATTGGGCAGATTGTGATCCTTGGTGGTGCGTATTCAGTTAATGGAAATGTCAACCCTGCAGCTGAGGCAAATATA TTTGGTGACCCTGATGCAGCTGATATAGTTTTCACCTCCGGTGCTGATATTTTGGCTGTGGGAATAAATATTACACACCAAGTAGTTCTTTCTGATGCTGACCGGGAAAAGCTTGAACAGTCTGATAGCAAATATGCCCGATACTTGAGCAAGATCCTGGGTCTTTATTATGATTACCACAAGGACGCCTACTTCATAAAAGGAGTGTATCTTCACGATCCAGCAACACTTATTGCTGCGGTAGATCCGTCACTGATGACTTACACGGAAAGGTGTAGTGAGGGTGCAG ]
[+] EMBL CB658613 [ AC GACGAAGAAGAAGCTCGTCATCGACACCGACCCGGGAATCGATGACGCCATGGCCATCTTCGTGGCGCTGAGGTCGCCGGAGGTGGAGCTGCTGGGCCTCACCACCATCTTCGGCAACGTCTACACCACCCTCGCCACCCGCAACGCCCTCCACCTGCTGGAGGCTGTTGGGAGGAC TGACATCCCCGTGGCAGAGGGATCCCATGTAACAATCAAGAAAGCCACCAAGCTAC GGATTGCGAGCTTTGTTCATGGCTCGGATGGTCTAGGAAATCAGAACTTTCCTCCGCCAACTGGGAAGCCCTTAGATCAATCGGCCGCCGCGTTTCTTGTCGAGCAGGCAAATCTGTACCCTGGACAAGTTACT GTGGTT GCCCTTGGTCCACTTACCAACCTAGCTTTGGCTATAGAACTTGATCCTTCTTTCCCGAAGAAGATTGGGCAGATTGTGATCCTTGGTGGTGCGTATTCAGTTAATGGAAATGTCAACCCTGCAGCTGAGGCAAATATA TTTGGTGACCCTGATGCAGCTGATATAGTTTTCACCTCCGGTGCTGATATTTTGGCTGTGGGAATAAATATTACACACCAAGTAGTTCTTTCTGATGCTGACCGGGAAAAGCTTGAACAGTCTGATAGCAAATATGCCCGATACTTGAGCAAGATCCTGGGTCTTTATTATGATTACCACAAGGACGCCTACTTCATANAAGGAGTGTATCTTCACGATCCAGCAACACTTATTGCTGCGGTAGATCCGTCACTGATGA ]
[-] EMBL CB658614 [ TCTGTACCCTGGACAAGTTACT GTGGTT GCCCTTGGTCCACTTACCAACCTAGCTTTGGCTATAGAACTTGATCCTTCTTTCCCGAAGAAGATTGGGCAGATTGTGATCCTTGGTGGTGCGTATTCAGTTAATGGAAATGTCAACCCTGCAGCTGAGGCAAATATA TTTGGTGACCCTGATGCAGCTGATATAGTTTTCACCTCCGGTGCTGATATTTTGGCTGTGGGAATAAATATTACACACCAAGTAGTTCTTTCTGATGCTGACCGGGAAAAGCTTGAACAGTCTGATAGCAAATATGCCCGATACTTGAGCAAGATCCTGGGTCTTTATTATGATTACCACAAGGACGCCTACTTCATAAAAGGAGTGTATCTTCACGATCCAGCAACACTTATTGCTGCGGTAGATCCGTCACTGATGACTTACACGG AAGGTGTAGTGAGGGTGCAGACTGATGGCATCACAAAGGGTCTCACAGTTTTCGACACA ACCAAGAAAAGGTA TGGGGAGATAACTGCGTGGACCGGTAAGCCAACCGTGAAG GTTGCTGTG ACCGTTGATGCTCCTGCCG TTGTGGAGA TGA TCATGCAG AGGC TTACGACGGA TGATTAGCAGC AGCAGCAGCAGC AGCAG CAAGCAAGCAG CCAAGGGAAAAACGCTGCCTTTGTCTTG TTGAACCTGTCGGATCTTATAAAGAATAGACAATGCTGTATATCCTAAATTCTGAAGAATTTGCTTTACATGATTCGTCGTCGAGGTTG ]
[-] EMBL CB679009 [ GGTCCACTTACCAACCTAGCTTTGGCTATAGAACTTGATCCTTCTTTCCCGAAGAAGATTGGGCAGATTGTGATCCTTGGTGGTGCGTATTCAGTTAATGGAAATGTCAACCCTGCAGCTGAGGCAAATATA TTTGGTGACCCTGATGCAGCTGATATAGTTTTCACCTCCGGTGCTGATATTTTGGCTGTGGGAATAAATATTACACACCAAGTAGTTCTTTCTGATGCTGACCGGGAAAAGCTTGAACAGTCTGATAGCAAATATGCCCGATACTTGAGCAAGATCCTGGGTCTTTATTATGATTACCACAAGGACGCCTACTTCATAAAAGGAGTGTATCTTCACGATCCAGCAACACTTATTGCTGCGGTAGATCCGTCAATAATGACTTACACGG AAGGTGTAGTGAGGGTGCAGACTGATGGCATCACAAAGGGTCTCACAGTTTTCGACACA ACCAAGAAAAGGTA TGGGGAGATAACTGCGTGGACCGGTAAGCCAACCGTGAAG GTTGCTGTG ACCGTTGATGCTCCTGCCG TTGTGGAGA TGA TCATGCAG AGGC TTACGACGGA TGATTAGCAGC AGCAGCAGCAGC AGCAG CAAGCAAAAAG CCAAGGGAAATTTTTGGGGTTTGTCTTG TTGAACCTGTCGGATCTTATAAAGAATAGACAATGCTGTATATCCTAAATTCTGAAGAAATGGCTTTACATGATTCGTCG ]
[-] EMBL BI306484 [ ACCTCCGGTGCTGATATTTTGGCTGTGGGAATAAATATTACACACCAAGTAGTTCTTTCTGATGCTGACCGGGAAAAGCTTGAACAGTCTGATAGCAAATATGCCCGATACTTGAGCAAGATCCTGGGTCTTTATTATGATTACCACAAGGACGCCTACTTCATAAAAGGAGTGTATCTTCACGATCCAGCAACACTTATTGCTGCGGTAGATCCGTCACTGATGACTTACACGG AAGGTGTAGTGAGGGTGCAGACTGATGGCATCACAAAGGGTCTCACAGTTTTCGACACA ACCAAGAAAAGGTA TGGGGAGATAACTGCGTGGACCGGTAAGCCAACCGTGAAG GTTGCTGTG ACCGTTGATGCTCCTGCCG TTGTGGAGA TGA TCATGCAG AGGC TTACGACGGA TGATTAGCAGC AGCAGCAGCAGC AGCAG CAAGCAAGCAG CCAAGGGAAAAACGCTGCCTTTGTCTTG TTGAACCTGTCTGATCTTATAAAGGATAGACAATGCTGTATATCCTAAATTCTGAAGAATTTGCTTTACATGATTCGTCGTCGAGGTTGATCAACATCACACAGAACTAGCTAGAAACAGCCTGATGCACTGATTCAGAGGTTGACAATCCATTTCAAT ]
[-] EMBL CF294171 [ CTGTGGGAATAAATATTACACACCAAGTAGTTCTTTCTGATGCTGACCGGGAAAAGCTTGAACAGTCTGATAGCAAATATGCCCGATACTTGAGCAAGATCCTGGGTCTTTATTATGATTACCACAAGGACGCCTACTTCATAAAAGGAGTGTATCTTCACGATCCAGCAACACTTATTGCTGCGGTAGATCCGTCACTGATGACTTACACGG AAGGTGTAGTGAGGGTGCAGACTGATGGCATCACAAAGGGTCTCACAGTTTTCGACACA ACCAAGAAAAGGTA TGGGGAGATAACTGCGTGGACCGGTAAGCCAACCGTGAAG GTTGCTGTG ACCGTTGATGCTCCTGCCG TTGTGGAGA TGA TCATGCAG AGGC TTACGACGGA TGATTAGCAGC AGCAGCAGCAGC AGCAG CAAGCAAGCAG CCAAGGGAAAAACGCTGCCTTTGTCTTG TTGAACCTGTCGGATCTTATAAAGAATAGACAATGCTGTATATCCTAAATTCTGAAGAATTTGCTTTACATGATTCGTCGTCGAGGTTGATCAAaaaaaa ]
[-] EMBL CF337962 [ AATATTACACACCAAGTAGTTCTTTCTGATGCTGACCGGGAAAAGCTTGAACAGTCTGATAGCAAATATGCCCGATACTTGAGCAAGATCCTGGGTCTTTATTATGATTACCACAAGGACGCCTACTTCATAAAAGGAGTGTATCTTCACGATCCAGCAACACTTATTGCTGCGGTAGATCCGTCACTGATGACTTACACGG AAGGTGTAGTGAGGGTGCAGACTGATGGCATCACAAAGGGTCTCACAGTTTTCGACACA ACCAAGAAAAGGTA TGGGGAGATAACTGCGTGGACCGGTAAGCCAACCGTGAAG GTTGCTGTG ACCGTTGATGCTCCTGCCG TTGTGGAGA TGA TCATGCAG AGGC TTACGACGGA TGATTAGCAGC AGCAGCAGCAGC AGCAG CAAGCAAGCAG CCAAGGGAAAAACGCTGCCTTTGTCTTG TTGAACCTGTCGGATCTTATAAAGAATAGACAATGCTGTATATCCTAAATTCTGAAGAATTTGCTTTACATGATTCGTCGTCGAGGTTGATCAACAaaaaaa ]
[+] EMBL BQ907692 [ ATTATGATTACCACAAGGACGCCTACTTCATAAAAGGAGTGTATCTTCACGATCCAGCAACACTTATTGCTGCGGTAGATCCGTCACTGATGACTTACACGG AAGGTGTAGTGAGGGTGCAGACTGATGGCATCACAAAGGGTCTCACAGTTTTCGACACA ACCAAGAAAAGGTA TGGGGAGATAACTGCGTGGACCGGTAAGCCAACCGTGAAG GTTGCTGTG ACCGTTGATGCTCCTGCCG TTGTGGAGA TGA TCATGCAG AGGC TTACGACGGA TGATTAGCAGC AGCAGCAGCAGC AGCAG CAAGCAAGCAG CCAAGGGAAAAAC CTGCCTTTGTCTTG TTGAACCTGTCTGATCTTATAAAGGATAGACAATGCTGTATATCCTAAATTCTGAAGAATTTGCTTTACATGATTCGTCGTCGAGGTTGATCAACATCAaaaaa ]
[+] EMBL BI813053 [ ctACATACCGAGAAAAGGTATTGGGGAGATAACTGCGTGGACCGGTAAGCCAACCGTGTAGTTTTCCTGTGAACCGTTGATGCTCCTGCCGTTTGTGGAGATTGATTCATGCAGAAGGCTTTACGACGGATTGATTAGCAGCAAGCAGCAGCAGCAACCAGCCAAGCAAGCAGCCCAAGGGAAAAACGCTGCCTTTGTCTTGTTTGAACCTGTCTGATCTTATAAAGGATAGACAATGCTGTATATCCTAAATTCTGAAGAATTTGCTTTACATGATTCGTCGTCGAGGTTGATCAACATCACACAGAACTAGCTAGAAACAGCCTGATGCACTGATTCAGAGGTTGACAATCCATTTCAATTTTATGGCCAGAATTCATACTACAAAAA ]
[+] EMBL AU172544 [ anA TGA TCATGCAN AGGC TTNCGCCGGA TGATTAGCAGC AGCAGCAGCAGC AGCAG CAAGCAAGCAG CCAAGGGAAAAACGCTGCCTTTGTCTTG TTGAACCTGTCGGATNTTATAAANAATAGNCAATGCTGTATATCCTAAATTNTGAAGAATTTGCTTTACATGATTCGTCGTCGAGGTTGATCAACATCNCNCAGAACTAGCTAGAAACAGCCTGATGCNCTGATTCANAGGTTGNCAATCCATTTCAATTTTATGGCCAGAATTCATACTACAAAGAGTAAATTTCAGAAAGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_16289#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1206 fasta sequence
[GAAGGAGTAGAAAGACCCGATCCCATCCGGTGTTATCCATCCCTTCCCTGATCCCCCATCCATCGCCGCCGCCGCCGCCGCCGTGGAGACGATGACGACGACGAAGAAGAAGCTCGTCATCGACACCGACCCGGGAATCGATGACGCCATGGCCATCTTCGTGGCGCTGAGGTCGCCTGAGGTGGAGCTGCTGGGCCTCACCACCATCTTCGGCAACGTCTACACCACCCTCGCCACCCGCAACGCCCTCCACCTGCTGGAGGCTGTTGGGAGGACTGACATCCCCGTGGCAGAGGGATCCCATGTAACAATCAAGAAAGCCACCAAGCTACGGATTGCGAGCTTTGTTCATGGCTCGGATGGTCTAGGAAATCAGAACTTTCCTCCGCCAACTGGGAAGCCCTTAGATCAATCGGCCGCCGCGTTTCTTGTCGAGCAGGCAAATCTGTACCCTGGACAAGTTACT-GTGGTT-GCCCTTGGTCCACTTACCAACCTAGCTTTGGCTATAGAACTTGATCCTTCTTTCCCGAAGAAGATTGGGCAGATTGTGATCCTT-GGTGGTGCGTATTCAGTTAAT-GGAAATGTCAACCCTGCAGCTGAGGCAAATATATTTGGTGACCCTGATGCAGCTGATATAGTTTTCACCTCCGGTGCTGATATTTTGGCTGTGGGAATAAATATTACACACCAAGTAGTTCTTTCTGATGCTGACCGGGAAAAGCTTGAACAGTCTGATAGCAAATATGCCCGATACTTGAGCAAGATCCTGGGTCTTTATTATGATTACCACAAGGACGCCTACTTCATAAAAGGAGTGTATCTTCACGATCCAGCAACAC-TTATTGCTGC-GGTAGATCCGTCACT-GATGACTTACACGGAAGGTGTAGTGAGGGTGCAGACT-GATGGCATCAC-AAAGGGTCTCACAGTTTTC-GACACAACC-AA-GAAAA--G-GTATGGGGAGATAACTGCGTGGACCGGTAAGCCAACCGTGAAGGTTGCTGTGACCGTTGATGCTCCTGCCGTTGTGGAGATGATCATGCAGAGGCTTACGACGGATGATTAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAGCAGCCAAGGGAAAAACGCTGCCTTTGTCTTGTTGAACCTGTCGGATCTTATAAAGAATAGACAATGCTGTATATCCTAAATTCTGAAGAATTTGCTTTAAAAAAAGAAAAAAAAAAA]
[+] EMBL CF312722 [GAAGGAGTAGAAAGACCCGATCCCATCCGGTGTTATCCATCCCTTCCCTGATCCCCCATCCATCGCCGCCGCCGCCGCCGCCGTGGAGACGATGACGACGACGAAGAAGAAGCTCGTCATCGACACCGACCCGGGAATCGATGACGCCATGGCCATCTTCGTGGCGCTGAGGTCGCCTGAGGTGGAGCTGCTGGGCCTCACCACCATCTTCGGCAACGTCTACACCACCCTCGCCACCCGCAACGCCCTCCACCTGCTGGAGGCTGTTGGGAGGACTGACATCCCCGTGGCAGAGGGATCCCATGTAACAATCAAGAAAGCCACCAAGCTACGGATTGCGAGCTTTGTTCATGGCTCGGATGGTCTAGGAAATCAGAACTTTCCTCCGCCAACTGGGAAGCCCTTAGATCAATCGGCCGCCGCGTTTCTTGTCGAGCAGGCAAATCTGTACCCTGGACAAGTTACTGGTGGTTGGCCCTTGGTCCACTTACCAACCTAGCTTTGGCTATAGAACTTGATCCTTCTTTCCCGAAGAAGATTGGGCAGATTGTGATCCTTGGGTGGTGCGTATTCAGTTAATGGGAAATGTCAA ]
[+] EMBL CA766081 [ GCTGCTGGGCCTCACCACCATCTTCGGCAACGTCTACACCACCCTCGCCACCCGCAACGCCCTCCACCTGCTGGAGGCTGTTGGGAGGACTGACATCCCCGTGGCAGAGGGATCCCATGTAACAATCAAGAAAGCCACCAAGCTACGGATTGCGAGCTTTGTTCATGGCTCGGATGGTCTAGGAAATCAGAACTTTCCTCCGCCAACTGGGAAGCCCTTAGATCAATCGGCCGCGGCGTTTCTTGTCGAGCAGGCAAATCTGTACCCTGGACAAGTTACT GTGGTT GCCCTTGGTCCACTTACCAACCTAGCTTTGGCTATAGAACTTGATCCTTCTTTCCCGAAGAAGATTGGGCAGATTGTGATCCTT GGTGGTGCGTATTCAGTTAAT GGAAATGTCAACCCTGCAGCTGAGGCAAATATATTTGGTGACCCTGATGCAGCTGATATAGTTTTCACCTCCGGTGCTGATATTTTGGCTGTGGGAATAAATATTACACACCAAGTAGTTCTTTCTGATGCTGACCGGGAAAAGCTTGAACAGTCTGATAGCAAATATGCCCGATACTTGAGCAAGATCCTGGGTCTTTATTATGATTACCACAAGGACGCCTACTTCATAAAAGGAGTGTATCTTCACGATCCAGCAACAC TTATTGCTGC GGTAGATCCGTCACT GATGACTTACACGGAANGTGTAGTGAGGGTGCAGACT GATGGCATCAC AAAGGGTCTCACAGNTTTC GACACAAAC AA NAAAA A GTATGGGGAGATAACTGGGGGGACCGGTAAGCCAACCGng ]
[+] EMBL AU068676 [ CCGTGGCAGAGGGATCCCATGTAACAATCAAGAAAGCCACCAAGCTACGGATTGCGAGCTTTGTTCATGGCTCGGATGGTCTAGGAAATCAGAACTTTCCTCCGCCAACTGGGAAGCCCTTAGATCAATCGGCCGCCGCGTTTCTTGTCGAGCAGGCAAATCTGTACCCTGGACAAGTTACT GTGGTT GCCCTTGGTCCACTTACCAACCTAGCTTTGGCTATAGAACTTGATCCTTCTTTCCCGAAGAAGATTGGGCAGATTGTGATCCTT GGTGGTGCGTATTCAGTTAAT GGAAATGTCAACCCTGCAGCTGAGGCAAATATATTTGGTGACCCTGATGCAGCTGATATAGTTTTCACCTCCGGTGCTGATATTTTGGCTGTGGGAATAAATATTACACACCAAGTAGTTCTTTCTGATGCTGACCGGGAAAAGCTTGAACAGTCTGATAGCAAATATGCCCGATACTTGAGCAAGATCCTGGGTCTTTATTATGATTACCACAAGGACGCCTACTTCATAAAAGGAGTGTATCTTCACGATCCAGCAACACTTTATTGCTGCGGGTAGATCCGTCACTGGATGACTTACACGGAA GTGTAGTGAGGGTGCAGACTGGATGGCATCACNAAGGGGTCTCACAGTTTTC GACACAACC AA GAAAAAGG GTATGG ]
[-] EMBL CB644854 [ GCCGCCGCGTTTCTTGTCGAGCAGGCAAATCTGTACCCTGGACAAGTTACT GTGGTT GCCCTTGGTCCACTTACCAACCTAGCTTTGGCTATAGAACTTGATCCTTCTTTCCCGAAGAAGATTGGGCAGATTGTGATCCTT GGTGGTGCGTATTCAGTTAAT GGAAATGTCAACCCTGCAGCTGAGGCAAATATATTTGGTGACCCTGATGCAGCTGATATAGTTTTCACCTCCGGTGCTGATATTTTGGCTGTGGGAATAAATATTACACACCAAGTAGTTCTTTCTGATGCTGACCGGGAAAAGCTTGAACAGTCTGATAGCAAATATGCCCGATACTTGAGCAAGATCCTGGGTCTTTATTATGATTACCACAAGGACGCCTACTTCATAAAAGGAGTGTATCTTCACGATCCAGCAACAC TTATTGCTGC GGTAGATCCGTCACT GATGACTTACACGGAAGGTGTAGTGAGGGTGCAGACT GATGGCATCAC AAAGGGTCTCACAGTTTTC GACACAACC AA GAAAA G GTATGGGGAGATAACTGCGTGGACCGGTAAGCCAACCGTGAAGGTTGCTGTGACCGTTGATGCTCCTGCCGTTGTGGAGATGATCATGCAGAGGCTTACGACGGATGATTAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAGCAGCCAAGGGAAAAACGCTGCCTTTGTCTTGTTGAACCTGTCGGATCTTATAAAGAATAGACAATGCTGTATATCCTAAATTCTGAAGAATTTGCTTAAAAAAAAGA ]
[+] EMBL AU068675 [ TAGCTTTGGCTATAGAACTTGATCCTTCTTTCCCGAAGAAGATTGGGCAGATTGTGATCCTT GGTGGTGCGTATTCAGTTAAT GGAAATGTCAACCCTGCAGCTGAGGCAAATATATTTGGTGACCCTGATGCAGCTGATATAGTTTTTCCCTCCGGTGCTGATATTTTGGCTGTGGGAATAAATATTACACACCAAGTAGTTCTTTCTGATGCTGACCGGGAAAAGCTTGAACAGTCTGATAGCAAATATGCCCGATACTTGAGCAAGATCCTGGGTCTTTATTATGATTACCACAAGGACGCCTACTTCATAAAAGGAGTGTATCTTCACGATCCAGCAACAC TTATTGCTGC GGTAGATCCGTCACT GATGACTTACACGGAAGGTGTAGTGAGGGTGCAGACT GATGGCATCAC AAAGGGTCTCACAGTTTTC GACACAACC AA GAAAA G GTATGGGGAGATAACTGCGTGGACCGGTAAGCCAACCGTGAAGGTTGCTGTGACCGTTGATGCTCCTGCCGTTGTGGAGATGATCATGCAGAGGCTTACGACGGATGATTAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAGCAGCCAAGGGAAAAACGCTGCCTTTGTCTTGTTGAACCTGTCGGATCTTATAAAGAATAGACAATGCTGTATATCCTAAATTCTGAAGAATTTGCTTTACAAAAAAAAAAAAAAAAA]
[+] EMBL CF311530 [ AGAACTTGATCCTTCTTTCCCGAAGAAGATTGGGCAGATTGTGATCCTT GGTGGTGCGTATTCAGTTAAT GGAAATGTCAACCCTGCAGCTGAGGCAAATATATTTGGTGACCCTGATGCAGCTGATATAGTTTTCACCTCCGGTGCTGATATTTTGGCTGTGGGAATAAATATTACACACCAAGTAGTTCTTTCTGATGCTGACCGGGAAAAGCTTGAACAGTCTGATAGCAAATATGCCCGATACTTGAGCAAGATCCTGGGTCTTTATTATGATTACCACAAGGACGCCTACTTCATAAAAGGAGTGTATCTTCACGATCCAGCAACAC TTATTGCTGC GGTAGATCCGTCACT GATGACTTACACGGAAGGTGTAGTGAGGGTGCATACT GATGGCATCAC AAAGGGTCTCACAGTTTTC GACACAACC AA GAAAA G GTATGGGGAGATAACTGCGTGGACCGGTAAGCCAACCGTGAA GTTGCTGTGACCGTTGATGCTCCTGCCGTTGTGGAGATGATCATGCAGAGGCTTACGACGGATGATTAGCAGCAGCAGCAGCAGCAGCAGC ]
[-] EMBL CB664752 [ GATCCTT GGTGGTGCGTATTCAGTTAAT GGAAATGTCAACCCTGCAGCTGAGGCAAATATATTTGGTGACCCTGATGCAGCTGATATAGTTTTCACCTCCGGTGCTGATATTTTGGCTGTGGGAATAAATATTACACACCAAGTAGTTCTTTCTGATGCTGACCGGGAAAAGCTTGACCAGTCTGATAGCAAATATGCCCGATACTTGAGCAAGATCCTGGGTCTTTATTATGATTACCACAAGGCCGCCTACTTCATAAAAGGAGTGTATCTTCACGATCCAGCAACAC TTATTGCTGC GGTAGATCCGTCACT GATGACTTACACGGAAGGTGTAGTGAGGGTGCAGACT GATGGCATCAC AAAGGGTCTCACAGTTTTCAGACACAACCTAACGAAAA GAGTATGt ]
[-] EMBL CF312723 [ GCAACAC TTATTGCTGC GGTAGATCCGTCACT GATGACTTACACGGAAGGTGTAGTGAGGGTGCAGACT GATGGCATCAC AAAGGGTCTCACAGTTTTC GACACAACC AA GAAAA G GTATGGGGAGATAACTGCGTGGACCGGTAAGCCAACCGTGAAGGTTGCTGTGACCGTTGATGCTCCTGCCGTTGTGGAGATGATCATGCAGAGGCTTACGACGGATGATTAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAGCAGCCAAGGGAAAAACGCTGCCTTTGTCTTGTTGAACCTGTCGGATCTTATAAAGAATAGACAATGCTGTATATCCTAAATTCTGAAGAATTTGCTTTAAAAA ]
consensusID : consensus_16289#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 741 fasta sequence
[TTTTCACCTCCGGTGCTGATATTTTGGCTGTGGGAATAAATATTACACACCAAGTAGTTCTTTCTGATGCTGACCGGGAAAAGCTTGAACAGTCTGATAGCAAATATGCCCGATACTTGAGCAAGATCCTGGGTCTTTATTATGATTACCACAAGGACGCCTACTTCATAAAAGGTCAGTGCCTAGCATCATGCAAGTTCATCGGGAAAAAAAGGTTGCACAGTCTGTAAAAACTTACGTGAAGAGGGGACGGATCAGACACCAAGCAATTCTCCAAAGCAGAATATTAGTGACAGACATTGTGTGTCGAAAATNACAGGAGTGTATCTTCACGATCCAGCAACACTTATTGCTGCGGTAGATCCGTCACTGATGACTTACACGGAAGGTGTAGTGAGGGTGCAGACTGATGGCATCACAAAGGGTCTCACAGTTTTCGACACAACCAAGAAAAGGTATGGGGAGATAACTGCGTGGACCGGTAAGCCAACCGTGAAGGTTGCTGTGACCGTTGATGCTCCCGCCGTTGTGGAGATGATCATGCAGAGGCTTACGACGGATGATTAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAGCAGCCAAGGGAAAAACGCTGCCTTTGTCTTGTTGAACCTGTCGGATCTTATAAAGAATAGACAATGCTGTATATCCTAAATTCTGAAGAATTTGCTTTACATGATTCGTCGTCGAGGTTGATCCC---CAAAAAAAAAAAAAAAAAAA]
[-] EMBL CA754234 [TTTTCACCTCCGGTGCTGATATTTTGGCTGTGGGAATAAATATTACACACCAAGTAGTTCTTTCTGATGCTGACCGGGAAAAGCTTGAACAGTCTGATAGCAAATATGCCCGATACTTGAGCAAGATCCTGGGTCTTTATTATGATTACCACAAGGACGCCTACTTCATAAAAGGTCAGTGCCTAGCATCATGCAAGTTCATCGGGAAAAAAAGGTTGCACAGTCTGTAAAAACTTACGTGAAGAGGGGACGGATCAGACACCAAGCAATTCTCCAAAGCAGAATATTAGTGACAGACATTGTGTGTCGAAAATNACAGGAGTGTATCTTCACGATCCAGCAACACTTATTGCTGCGGTAGATCCGTCACTGATGACTTACACGGAAGGTGTAGTGAGGGTGCAGACTGATGGCATCACAAAGGGTCTCACAGTTTTCGACACAACCAAGAAAAGGTATGGGGAGATAACTGCGTGGACCGGTAAGCCAACCGTGAAGGTTGCTGTGACCGTTGATGCTCCCGCCGTTGTGGAGATGATCATGCAGAGGCTTACGACGGATGATTAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAGCAGCCAAGGGAAAAACGCTGCCTTTGTCTTGTTGAACCTGTCGGATCTTATAAAGAATAGACAATGCTGTATATCCTAAATTCTGAAGAATTTGCTTTACATGATTCGTCGTCGAGGTTGATCCCCTTCAAAAAAAAAAAAAAAAAAA]
[-] EMBL CF294813 [ TAGTGAGGGTGCAGACTGATGGCATCACAAAGGGTTTCCCAGTTTTGGACACAACCAAGAAAAGGTAGGGGGAGATAACTGCGTGGACCGGTAAGCCACCCGTAAAGGTTGCTGTGACCGTTGATGCTCCCGCCGTTGTGCAGATGATCATGCAGAGGCTTACCACGGATGATTAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAGCAGCCAAGGGAAAAACGCTGCCTTTGTCTTGTTGACCCTGTCGGATCTTATAAAGAATAGACAATGCTGTATATCCTAAATTTTGAAGAATTTGCTTTACATGATTCGTCGTCGAGGTTGAT CAAAAAAAAAAAAAAAA ]
[+] EMBL AU032434 [ gtaattnAGGGTNCAGACTGATGGCATNACAAAGGGTCTCACAGTTTTCGACACAACCAAGAAAAGGTATGGGGAGATAACTGCGTGGACCGGTAAGCCAACCGTGAAGGTTGCTGTGACCGTTGATGCTCCTGCCGTTGTGGAGATGATCATGCAGAGGCTTACGACGGATGATTAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAGCAGCCAAGGGAAAAACGCTGCCTTTGTCTTGTTGAACCTGTCGGATCTTATAAAGAATAGACAATGCTGTATATCCTAAATTCTGAAGAATTTGCTTTACATGATTCGTCGTCGAGGTTGATCAA CAAAAAAAAAAAAAAAAA ]
consensusID : consensus_16289#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 193 fasta sequence
[CCTCTCCTCCTCGTCTACCTTACCTAGCAGCAGCAGCAGCAGCAAGCAAGCAGCCAAGGGAAAAACGCTGCCTTTGTCTTGTTGAACCTGTCGGATCTTATAAAGAATAGACAATGCTGTATATCCTAAATTCTGAAGAATTTGCTTTACATGATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF301175 [CCTCTCCTCCTCGTCTACCTTACCTAGCAGCAGCAGCAGCAGCAAGCAAGCAGCCAAGGGAAAAACGCTGCCTTTGTCTTGTTGAACCTGTCGGATCTTATAAAGAATAGACAATGCTGTATATCCTAAATTCTGAAGAATTTGCTTTACATGATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_16289#2 ------------------------------------------------------------
consensus_16289#3 ------------------------------------------------------------
consensus_16289#0 CTGGACTGAAGGAGTAGATCGTCCACACACTCATGAATCATCGCTCACTCAAACAGCCTT 60
consensus_16289#1 ------------------------------------------------------------
consensus_16289#2 ------------------------------------------------------------
consensus_16289#3 ------------------------------------------------------------
consensus_16289#0 GCCTCCTCCTGTTGAGTTGACCCGATCCCATCCGGTGTTATCCATCCCTTCCCTGATCCC 120
consensus_16289#1 -----GAAGGAGTAGAAAGACCCGATCCCATCCGGTGTTATCCATCCCTTCCCTGATCCC 55
consensus_16289#2 ------------------------------------------------------------
consensus_16289#3 ------------------------------------------------------------
consensus_16289#0 CCATCCATCGCCGCCGCCGCCGCCGCCGTGGAGACGATGACGACGACGAAGAAGAAGCTC 180
consensus_16289#1 CCATCCATCGCCGCCGCCGCCGCCGCCGTGGAGACGATGACGACGACGAAGAAGAAGCTC 115
consensus_16289#2 ------------------------------------------------------------
consensus_16289#3 ------------------------------------------------------------
consensus_16289#0 GTCATCGACACCGACCCGGGAATCGATGACGCCATGGCCATCTTCGTGGCGCTGAGGTCG 240
consensus_16289#1 GTCATCGACACCGACCCGGGAATCGATGACGCCATGGCCATCTTCGTGGCGCTGAGGTCG 175
consensus_16289#2 ------------------------------------------------------------
consensus_16289#3 ------------------------------------------------------------
consensus_16289#0 CCGGAGGTGGAGCTGCTGGGCCTCACCACCATCTTCGGCAACGTCTACACCACCCTCGCC 300
consensus_16289#1 CCTGAGGTGGAGCTGCTGGGCCTCACCACCATCTTCGGCAACGTCTACACCACCCTCGCC 235
consensus_16289#2 ------------------------------------------------------------
consensus_16289#3 ------------------------------------------------------------
consensus_16289#0 ACCCGCAACGCCCTCCACCTGCTGGAGGCTGTTGGGAGGACTGACATCCCCGTGGCAGAG 360
consensus_16289#1 ACCCGCAACGCCCTCCACCTGCTGGAGGCTGTTGGGAGGACTGACATCCCCGTGGCAGAG 295
consensus_16289#2 ------------------------------------------------------------
consensus_16289#3 ------------------------------------------------------------
consensus_16289#0 GGATCCCATGTAACAATCAAGAAAGCCACCAAGCTACGGATTGCGAGCTTTGTTCATGGC 420
consensus_16289#1 GGATCCCATGTAACAATCAAGAAAGCCACCAAGCTACGGATTGCGAGCTTTGTTCATGGC 355
consensus_16289#2 ------------------------------------------------------------
consensus_16289#3 ------------------------------------------------------------
consensus_16289#0 TCGGATGGTCTAGGAAATCAGAACTTTCCTCCGCCAACTGGGAAGCCCTTAGATCAATCG 480
consensus_16289#1 TCGGATGGTCTAGGAAATCAGAACTTTCCTCCGCCAACTGGGAAGCCCTTAGATCAATCG 415
consensus_16289#2 ------------------------------------------------------------
consensus_16289#3 ------------------------------------------------------------
consensus_16289#0 GCCGCCGCGTTTCTTGTCGAGCAGGCAAATCTGTACCCTGGACAAGTTACTGTGGTTGCC 540
consensus_16289#1 GCCGCCGCGTTTCTTGTCGAGCAGGCAAATCTGTACCCTGGACAAGTTACTGTGGTTGCC 475
consensus_16289#2 -------------------TTTTCACCTCCGGTGCTGATATTTTGGCTGTGGGAATAAAT 41
consensus_16289#3 ------------------------------------------------------------
consensus_16289#0 CTTGGTCCACTTACCAACCTAGCTTTGGCTATAGAACTTGATCCTTCTTTCCCGAAGAAG 600
consensus_16289#1 CTTGGTCCACTTACCAACCTAGCTTTGGCTATAGAACTTGATCCTTCTTTCCCGAAGAAG 535
consensus_16289#2 ATTACACACCAAGTAGTTCTTTCTGATGCTGACCGGGAAAAGCTTGAACAGTCTGATAGC 101
consensus_16289#3 ------------------------------------------------------------
consensus_16289#0 ATTGGGCAGATTGTGATCCTTGGTGGTGCGTATTCAGTTAA-TGGAAATGTCAACCCTGC 659
consensus_16289#1 ATTGGGCAGATTGTGATCCTTGGTGGTGCGTATTCAGTTAA-TGGAAATGTCAACCCTGC 594
consensus_16289#2 AAATATGCCCGATACTTGAGCAAGATCCTGGGTCTTTATTATGATTACCACAAGGACGCC 161
consensus_16289#3 ------------------------------------------------------------
consensus_16289#0 AGCTGAGGCAAATATATTTGGTGACCCTGATGCAGCTGATATAGTTTTCACCTCCGGTGC 719
consensus_16289#1 AGCTGAGGCAAATATATTTGGTGACCCTGATGCAGCTGATATAGTTTTCACCTCCGGTGC 654
consensus_16289#2 TACTTCATAAAAGGTCAGTGCCTAGCATCATGCAAGTTCATCGGGAAAAAAAGGTTGCAC 221
consensus_16289#3 ------------------------------------------------------------
consensus_16289#0 TGATATTTTGGCTGTGGGAATAAATATTACACACCAAGTAGTTCTTTCTGATGCTGACCG 779
consensus_16289#1 TGATATTTTGGCTGTGGGAATAAATATTACACACCAAGTAGTTCTTTCTGATGCTGACCG 714
consensus_16289#2 AGTCTGTAAAAACTTACGTGAAGAGGGGACGGATCAGACACCAAGCAATTCTCCAAAGCA 281
consensus_16289#3 ------------------------------------------------------------
consensus_16289#0 GGAAAAGCTTGAACAGTCTGATAGCAAATATGCCCGATACTTGAGCAAGATCCTGGGTCT 839
consensus_16289#1 GGAAAAGCTTGAACAGTCTGATAGCAAATATGCCCGATACTTGAGCAAGATCCTGGGTCT 774
consensus_16289#2 GAATATTAGTGACAGACATTGTGTGTCGAAAATNACAGGAGTGTATCTTCACGATCCAGC 341
consensus_16289#3 ------------------------------------------------------------
consensus_16289#0 TTATTATGATTACCACAAGGACGCCTACTTCATAAAAGGAGTGTATCTTCACGATCCAGC 899
consensus_16289#1 TTATTATGATTACCACAAGGACGCCTACTTCATAAAAGGAGTGTATCTTCACGATCCAGC 834
consensus_16289#2 AACACTTATTGCTGCGGTAGATCCGTCACTGATGACTTACACGGAAGGTGTAGTGAGGGT 401
consensus_16289#3 ------------------------------------------------------------
consensus_16289#0 AACACTTATTGCTGCGGTAGATCCGTCACTGATGACTTACACGGAAGGTGTAGTGAGGGT 959
consensus_16289#1 AACACTTATTGCTGCGGTAGATCCGTCACTGATGACTTACACGGAAGGTGTAGTGAGGGT 894
consensus_16289#2 GCAGACTGATGGCATCACAAAGGGTCTCACAGTTTTCGACACAACCAAGAAAAGGTATGG 461
consensus_16289#3 ------------------------------------------------------------
consensus_16289#0 GCAGACTGATGGCATCACAAAGGGTCTCACAGTTTTCGACACAACCAAGAAAAGGTATGG 1019
consensus_16289#1 GCAGACTGATGGCATCACAAAGGGTCTCACAGTTTTCGACACAACCAAGAAAAGGTATGG 954
consensus_16289#2 GGAGATAACTGCGTGGACCGGTAAGCCAACCGTGAAGGTTGCTGTGACCGTTGATGCTCC 521
consensus_16289#3 ------------------------------------------------------------
consensus_16289#0 GGAGATAACTGCGTGGACCGGTAAGCCAACCGTGAAGGTTGCTGTGACCGTTGATGCTCC 1079
consensus_16289#1 GGAGATAACTGCGTGGACCGGTAAGCCAACCGTGAAGGTTGCTGTGACCGTTGATGCTCC 1014
consensus_16289#2 CGCCGTTGTGGAGATGATCATGCAGAGGCTTACGACGGATGATTAGCAGCAGCAGCAGCA 581
consensus_16289#3 ------------------------CCTCTCCTCCTCGTCTACCTTACC-TAGCAGCAGCA 35
consensus_16289#0 TGCCGTTGTGGAGATGATCATGCAGAGGCTTACGACGGATGATTAGCAGCAGCAGCAGCA 1139
consensus_16289#1 TGCCGTTGTGGAGATGATCATGCAGAGGCTTACGACGGATGATTAGCAGCAGCAGCAGCA 1074
* ** * * * **********
consensus_16289#2 GCAGCAGCAAGCAAGCAGCCAAGGGAAAAACGCTGCCTTTGTCTTGTTGAACCTGTCGGA 641
consensus_16289#3 GCAGCAGCAAGCAAGCAGCCAAGGGAAAAACGCTGCCTTTGTCTTGTTGAACCTGTCGGA 95
consensus_16289#0 GCAGCAGCAAGCAAGCAGCCAAGGGAAAAACGCTGCCTTTGTCTTGTTGAACCTGTCGGA 1199
consensus_16289#1 GCAGCAGCAAGCAAGCAGCCAAGGGAAAAACGCTGCCTTTGTCTTGTTGAACCTGTCGGA 1134
************************************************************
consensus_16289#2 TCTTATAAAGAATAGACAATGCTGTATATCCTAAATTCTGAAGAATTTGCTTTACATGAT 701
consensus_16289#3 TCTTATAAAGAATAGACAATGCTGTATATCCTAAATTCTGAAGAATTTGCTTTACATGAT 155
consensus_16289#0 TCTTATAAAGAATAGACAATGCTGTATATCCTAAATTCTGAAGAATTTGCTTTACATGAT 1259
consensus_16289#1 TCTTATAAAGAATAGACAATGCTGTATATCCTAAATTCTGAAGAATTTGCTTTAAAAAAA 1194
****************************************************** * *
consensus_16289#2 TCGTCGTCGAGGTTGATCCCCAAAAAAAAAAAAAAAAAAA-------------------- 741
consensus_16289#3 TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---------------------- 193
consensus_16289#0 TCGTCGTCGAGGTTGATCAACATCACACAGAACTAGCTAGAAACAGCCTGATGCACTGAT 1319
consensus_16289#1 GAAAAAAAAAAA------------------------------------------------ 1206
*
consensus_16289#2 ------------------------------------------------------------
consensus_16289#3 ------------------------------------------------------------
consensus_16289#0 TCAGAGGTTGACAATCCATTTCAATTTTATGGCCAGAATTCATACTACAAAAAGTAAATT 1379
consensus_16289#1 ------------------------------------------------------------
consensus_16289#2 ----------------------------------------
consensus_16289#3 ----------------------------------------
consensus_16289#0 TCAGAAAGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1419
consensus_16289#1 ----------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||