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Oryza sativa
cluster # 16331 cluster # 16331       Sequences # 32       consensus # 7


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_16331#0 length = 891 sequences # 1  
consensus_16331#1 length = 764 sequences # 6  
consensus_16331#2 length = 718 sequences # 15  
consensus_16331#3 length = 686 sequences # 5  
consensus_16331#4 length = 595 sequences # 1  
consensus_16331#5 length = 590 sequences # 1  
consensus_16331#6 length = 364 sequences # 3  

consensusID : consensus_16331#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 891
fasta sequence
                              [AGAGGCCCAATCGTTCGTGCTCCCGGGCATAGGCGCCGCCGTCGCCGGCGGCATGGTACCTCATGGTCCGTTCCCAAGAAAAAGGTCTCAAAATACAAGAAGGGTTTGAGGAATGGACCGAAAGCATTGAAGCCGGTTCCAGTGATTGTCCGTTGCAGGTGCTGTGGCCGAGTGAAGCTGCCCCACTTCTACTGCTGTAGCGGAGAAAAAGGGAACCCCGGTGACTCAAGCTCATAAACCTGTTCTGTTTCTCCCCAAGTTCAGTCTGCACTCAGCACATTAAGCAATGTCTGAACACTATTCCACCATGAACGTTTTCAGATCTCATTTTGTGTTCGGACGCTGTTCTGTTTTCAAGCTTTTTAATCAGTGTACACACTTTAAACCCAGCTTGGATTGGAAAACTACCCTTGTGAAAAACTAAAATGCCACTCGTGACATGAATGGATGCATTCTGTTTGTGACAAGAACCAAATGTGTGCATGTGCCTTGCTAGAACAAAGAAATAAAGGGTCTTATTTTTCTCCTCGAAAATAAAAATCACCCACTTCATTATCTCTTTTATTCTTATCTTTTCATATTTAAATTTGTGGGGGGGCCCGGTCCCCAATTGTTCCTATAGTGAGTTTTTTTCTCCCGTATATTGATCATTGTGTTTCAACATATGTGACTGGGTAAACCTTGAGATGTCACGACTGTATGTTGGGGGTGTTTCAATAACCTCACCCCCATTGATATTTATATATTTAGGTTCTTTTCATTTTTTTTTTATTAACAATTGTTTTAATTAATTAGAAATATGGATCCCATCTTATTATTATTATTTACCTCAATGAATCTNGGAATATTCATTCTCTTAATCTCTTCTTTACTCCCCTTTATGATTGTTCT]

[+] EMBL CA757017             [AGAGGCCCAATCGTTCGTGCTCCCGGGCATAGGCGCCGCCGTCGCCGGCGGCATGGTACCTCATGGTCCGTTCCCAAGAAAAAGGTCTCAAAATACAAGAAGGGTTTGAGGAATGGACCGAAAGCATTGAAGCCGGTTCCAGTGATTGTCCGTTGCAGGTGCTGTGGCCGAGTGAAGCTGCCCCACTTCTACTGCTGTAGCGGAGAAAAAGGGAACCCCGGTGACTCAAGCTCATAAACCTGTTCTGTTTCTCCCCAAGTTCAGTCTGCACTCAGCACATTAAGCAATGTCTGAACACTATTCCACCATGAACGTTTTCAGATCTCATTTTGTGTTCGGACGCTGTTCTGTTTTCAAGCTTTTTAATCAGTGTACACACTTTAAACCCAGCTTGGATTGGAAAACTACCCTTGTGAAAAACTAAAATGCCACTCGTGACATGAATGGATGCATTCTGTTTGTGACAAGAACCAAATGTGTGCATGTGCCTTGCTAGAACAAAGAAATAAAGGGTCTTATTTTTCTCCTCGAAAATAAAAATCACCCACTTCATTATCTCTTTTATTCTTATCTTTTCATATTTAAATTTGTGGGGGGGCCCGGTCCCCAATTGTTCCTATAGTGAGTTTTTTTCTCCCGTATATTGATCATTGTGTTTCAACATATGTGACTGGGTAAACCTTGAGATGTCACGACTGTATGTTGGGGGTGTTTCAATAACCTCACCCCCATTGATATTTATATATTTAGGTTCTTTTCATTTTTTTTTTATTAACAATTGTTTTAATTAATTAGAAATATGGATCCCATCTTATTATTATTATTTACCTCAATGAATCTNGGAATATTCATTCTCTTAATCTCTTCTTTACTCCCCTTTATGATTGTTCT]


>consensus_16331#0 AGAGGCCCAATCGTTCGTGCTCCCGGGCATAGGCGCCGCCGTCGCCGGCGGCATGGTACC TCATGGTCCGTTCCCAAGAAAAAGGTCTCAAAATACAAGAAGGGTTTGAGGAATGGACCG AAAGCATTGAAGCCGGTTCCAGTGATTGTCCGTTGCAGGTGCTGTGGCCGAGTGAAGCTG CCCCACTTCTACTGCTGTAGCGGAGAAAAAGGGAACCCCGGTGACTCAAGCTCATAAACC TGTTCTGTTTCTCCCCAAGTTCAGTCTGCACTCAGCACATTAAGCAATGTCTGAACACTA TTCCACCATGAACGTTTTCAGATCTCATTTTGTGTTCGGACGCTGTTCTGTTTTCAAGCT TTTTAATCAGTGTACACACTTTAAACCCAGCTTGGATTGGAAAACTACCCTTGTGAAAAA CTAAAATGCCACTCGTGACATGAATGGATGCATTCTGTTTGTGACAAGAACCAAATGTGT GCATGTGCCTTGCTAGAACAAAGAAATAAAGGGTCTTATTTTTCTCCTCGAAAATAAAAA TCACCCACTTCATTATCTCTTTTATTCTTATCTTTTCATATTTAAATTTGTGGGGGGGCC CGGTCCCCAATTGTTCCTATAGTGAGTTTTTTTCTCCCGTATATTGATCATTGTGTTTCA ACATATGTGACTGGGTAAACCTTGAGATGTCACGACTGTATGTTGGGGGTGTTTCAATAA CCTCACCCCCATTGATATTTATATATTTAGGTTCTTTTCATTTTTTTTTTATTAACAATT GTTTTAATTAATTAGAAATATGGATCCCATCTTATTATTATTATTTACCTCAATGAATCT NGGAATATTCATTCTCTTAATCTCTTCTTTACTCCCCTTTATGATTGTTCT



consensusID : consensus_16331#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 764
fasta sequence
                              [CTTTTTATTTTTTTTTTTAGGGGTCTTTTTTTTTAAAACACATCAACT-TTGTTAAGCAAGAGCAGAATTAGGGGATAAACCCCATTACATAACCAAGGATAAAA-GCTGAAAGCAAAAGAGCCACCCCTGAGAAGGGAGGGTTAACTGAACTACGAAATCAATCTTCCTGAAATAACCTAATAGCAGAAAAAGGAGCAAGTCGATAGGGAT-CTGCGGCGAAGCCGCGACG-ACTGCTACCCTGGGCCTCAAAAGATGTGCACTCCGCTTGACAAACCGTTAATCCCCATCAGCTGCCTCCACGGAAACGGCACAAGACCGA-GGTTTGTTGCTGAG-CCGTAGATTTTGGTGTGTGCATCACTGGACTCAGCGAAGGATCCCCACGAGGCTCATCATTGAATCTGAGGAGCTCTAACATCAACCCTGTCAACTGAAATTGCGCAGATGGTTCGAGCTCAACCCGAATGACAAACCCAGCATGGTTTCTTCTGTTAGGGAACAACAGGAAGGGTGAATCCGAAGAGCAGCCAACCTTCAACGATGGAGCACTTGAATGGCTGCAAATCAACTTGTCTTGCTGAGATGATGGAGATGGTTGAGGAAGAGATGGCCTGCACCATGAAACTGGAAGCAACGAGAAAGGGTGAGCTGCAACTGGAAGCAACGACGCAGGAGACGGCCCTCGCGCCGCCACCGTCGTCGCGGGCCGCGTCCGCGCCGCAGCCGCCGCTGAGGACTGGATCCGTGCTGCCGCCGTCGCCACGGGC]

[+] EMBL CB683486             [CTTTTTATTTTTTTTTTTAGGGGTCTTTTTTTTTAAAACACCTCAACT TTGTTAAGCAAGAGCAGAATTAGGGGATAAACCCCATTACATAACCAAGGATAAAA GCTGAAAGCAAAAGAGCCACCCCTGAGAAGGGAGGGTTAACTGAACTACGAAATCAATCTTCCTGAAATAACCTAATAGCAGAAAAAGGAGCAAGTCGATAGGGAT CTGCGGCGAAGCCGCGACG ACTGCTACCCTGGGCCTCAAAAGATGTGCACTCCGCTTGACAAACCGTTAATCCCCATCAGCTGCCTCCACGGAAACGGCACAAGACCGA GGTTTGTTGCTGAG CCGTAAATTTTGGTGTGTGCATCACTGGACTCAGCGAAGGATCCCCACGAGGCTCATCATTGAATCTGAGGAGCTCTAACATCAACCCTGTCAACTGAAATTGCGCAGATGGTTCGAGCTCAACCCGAATGACAAACCCAGCATGGTTTCTTCTGTTAGGGAACAACAGGAAGGGTGAATCCGAAGAGCAGCCAACCTTCAACGATGGAGCACTTGAATGGCTGCAAATCAACTTGTCTTGCTGAGATGATGGAGATGGTTGAGGAAGAGATGGCCTGCACCATGAAACTGGAAGCAACGAGAAAGGGTGAGCTGCAACTGGAAGCAACGACGCAGGAGACGGCCCTCGCGCCGCCACCGTCGTCGCGGGCCGCGTCCGCGCCGCAGCCGCCGCTGAGGACTGGATCCGTGCTGCCGCCGTCGCCACGGGC]
[-] EMBL AU070325             [ TTTTTTTTTTTTTTTTT  TTTTTTTTTTTTTTAAAACACATCAACT TTGTTAAGCAAGAGCAGAATTAGGGGATAAACCCCATTACATAACCAAGGATAAAA GCTGAAAG AAAAGAGCCACCCCTGAGAAGGGAGGGTTAACTGAACTACGAAATCAATCTTCCTGAAATAACCTAATAGCAGAAAAAGGAGCAAGTCGATAGGGAT CTGCGGCGAA  CGANCNGNACTGCTACCCTGGGCCTCAAAAGATGTGCACTCCGNTTGACAAACCGTTAATCCCCATCAGCTGCCTCCACGGAAACGGCACAAGACCGAGGGTTTGTTGNTGAGCCCGTAGATTTTGGTGTGTGCATCACTG                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB681170             [                                   AAACACATCAACTCTTTTTAAGCAAGAGCAGAATTAGGGGATAAACCCCATTACATAACCAAGGATAAAA GCTGAAAGCAAAAGAGCCACCCCTGAGAAGGGAGGGTTAACTGAACTACGAAATCAATCTTCCTGAAATAACCTAATAGCAGAAAAAGGAGCAAGTCGATAGGGAT CTGCGGCGAAGCCGCGACG ACTGCTACCCTGGGCCTCAAAAGATGTGCACTCCGCTTGACAAACCGTTAATCCCCATCAGCTGCCTCCACGGAAACGGCACAAGACCGA GGTTTGTTGCTGAG CCGTAGATTTTGGTGTGTGCATCACTGGACTCAGCGAAGGATCCCCACGAGGCTCATCATTGAATCTGAGGAGCTCTAACATCAACCCTGTCAACTGAAATTGCGCAGATGGTTCGAGCTCAACCCGAATGACAAACCCAGCATGGTTTCTTCTGTTAGGGAACAACAGGAAGGGTGAATCCGAAGAGCAGCCAACCTTCAACGATGGAGCACTTGAATGGCTGCAAATCAACTTGTCTTGCTGAGATGATGGAGATGGTTGAGGAAGAGATGGCCTGCACCATGAAACTGGAAGCAACGAGAAAGGGTGAGCTGCAACTGGAAGCAACGACGCAGGAGACGGCCCTCGCGCCGCCACCGTCGTCGCGGGCCGCGTCCGCGCCGCAGCCGCCGCTGAGGA                               ]
[-] EMBL CB662670             [                                            AACT TTGTTAAGCAAGAGCAGAATTAGGGGATAAACCCCATTACATAACCAAGGATAAAA GCTGAAAGCAAAAGAGCCACCCCTGAGAAGGGAGGGTTAACTGAACTACGAAATCAATCTTCCTGAAATAACCTAATAGCAGAAAAAGGAGCAAGTCGATAGGGAT CTGCGGCGAAGCCGCGACG ACTGCTACCCTGGGCCTCAAAAGATGTGCACTCCGCTTGACAAACCGTTAATCCCCATCAGCTGCCTCCACGGAAACGGCACAAGACCGA GGTTTGTTGCTGAG CCGTAGATTTTGGTGTGTGCATCACTGGACTCAGCGAAGGATCCCCACGAGGCTCATCATTGAATCTGAGGAGCTCTAACATCAACCCTGTCAACTGAAATTGCGCAGATGGTTCGAGCTCAACCCGAATGACAAACCCAGCATGGTTTCTTCTGTTAGGGAACAACAGGAAGGGTGAATCCGAAGAGCAGCCAACCTTCAACGATGGAGCACTTGAATGGCTGCAAATCAACTTGTCTTGCTGAGATGATGGAGATGGTTGAGGAAGAGATGGCCTGCACCATGAAACTGGAAGCAACGAGAAAGGGTGAGCTGCAACTGGAAGCAACGACGCAGGAGACGGCCCTCGCGCCGCCACCGTCGTGGCGGG                                                             ]
[+] EMBL CB662671             [                                                                                  CCTTTACATAACTTAGGATAAAATGGTGAAAGGAAAAGACCCCCCCCTGAAAAGGGAGGGTTAACTGAAATACGAAATCAATCTTCCTGAAATAACCTAATATCAAAAAAAGGAGCAAGTCCATAGGGAT CTGCGGCGAAGCCGCGACC AATGCTACCCTGGGCCTCAAAAGATGTGCACTCCGCTTGACAAACCGTTAATCCCCATCATCTGCCTCCACGGAAACGGGACAAAACCCA GGTTTGTTGCTGAG CCGTAAATTTTGGAGTGTGCATCACTGGACTCAACGAAGGATCCCCACGAGGCTCATCATTGAATCTGAGGAGCTCTAACATCAACCCTGGCAAGTGAAATTGCGCAGATGGTTCGAGCTCAACCCGAATGACAAACCCAGCATGGTTTCTTCTGTTAGGGAACAACAGGAAGGGT                                                                                                                                                                                                                                                               ]
[-] EMBL OSC21341             [                                                                                                                       GAGCCACCCCTGAGAAGGGAGGGTTAACTGAACTACGAAATCAATCCTCCTGAAATAACCTAATAGCAGAAAAAGGAGCAAGTCGATAGGGATNCT  NGCGAAGCCGCGACG ACTGCTACCCTGGGCCTCAAAAGATGTGCACTCCGCTTGACAAACCGTTAATCCCCATCAGCTGCCTCCACGGAAACGGCACAAGACCGA GGTTTGTTGCTGAG CCGTAGATTTTGGTGTGTGCATCACTGGACTCAGCGAAGGATCCCCACGAGGCTCATCATTGAATCTGAGGAGCTCTAACATCAACCCTGTCAACTGAAATTGCGCAGATGGTTCGAGCTCAACCCGAATGACAAACCCAGCATGGTTTCTTCTGTTAGGGAACAA                                                                                                                                                                                                                                                                         ]


>consensus_16331#1 CTTTTTATTTTTTTTTTTAGGGGTCTTTTTTTTTAAAACACATCAACTTTGTTAAGCAAG AGCAGAATTAGGGGATAAACCCCATTACATAACCAAGGATAAAAGCTGAAAGCAAAAGAG CCACCCCTGAGAAGGGAGGGTTAACTGAACTACGAAATCAATCTTCCTGAAATAACCTAA TAGCAGAAAAAGGAGCAAGTCGATAGGGATCTGCGGCGAAGCCGCGACGACTGCTACCCT GGGCCTCAAAAGATGTGCACTCCGCTTGACAAACCGTTAATCCCCATCAGCTGCCTCCAC GGAAACGGCACAAGACCGAGGTTTGTTGCTGAGCCGTAGATTTTGGTGTGTGCATCACTG GACTCAGCGAAGGATCCCCACGAGGCTCATCATTGAATCTGAGGAGCTCTAACATCAACC CTGTCAACTGAAATTGCGCAGATGGTTCGAGCTCAACCCGAATGACAAACCCAGCATGGT TTCTTCTGTTAGGGAACAACAGGAAGGGTGAATCCGAAGAGCAGCCAACCTTCAACGATG GAGCACTTGAATGGCTGCAAATCAACTTGTCTTGCTGAGATGATGGAGATGGTTGAGGAA GAGATGGCCTGCACCATGAAACTGGAAGCAACGAGAAAGGGTGAGCTGCAACTGGAAGCA ACGACGCAGGAGACGGCCCTCGCGCCGCCACCGTCGTCGCGGGCCGCGTCCGCGCCGCAG CCGCCGCTGAGGACTGGATCCGTGCTGCCGCCGTCGCCACGGGC



consensusID : consensus_16331#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 718
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAACACATC-AACTTTATTAAGCAGGAACAGATCTAGGGAATAAACCCCATTACATATCCAAGCAAAAGAGCCATCCTTAAGAAAGGAGGGTTAACTGAACTACGAAAGCAACCTTCCTGAAATAACCTAACAT-----CAGAAAAAGGAGCAAGTCGACAGGGATCTGCGGCGAAGCCGCGACGACTGCTACCCTGGGCCTCAAAAGATGTGCAGTCCGCTTGACAAACCGTTAATCCCCATCGGCTGCCTCCACGGAAACGGCACAAGACCGAGGTTTGATGCTGAGCCGTAGATTTT-GGTGTGTGCGTCACCGGACTCAGCAAAGGATCCCCACGGGGCTCATCAGGTGGTCCGAGCTCAACCCGAATGACAAACCCTACAT-GGTTTCTT-CT-GTTAGGGAACAACA-GGATAGATGAAT-CCGAA-G-AACA-GCCAACC-TTCAAGGAAGAAGCACTTGAATGGCTGCAAATCAGCTTCTGTCCT-GCTGA-GATG-ATGGA-GATGGCTGAG-AAAGAGATGGCCTGC-CCATGAAA-AACGAAACAAACTGGAAGCAACTGGAAGCAACGACGTGGGAGACAGCCCTCGCGCCGNCACTTGTCGCCGCAAGCCGCGTTNCACACCATCGCCGGCGCTACAGACTGGATCGGCGACGCCCGCCGTTACCACGGGCCCGGGACCGAACCCGTTGCCGC]

[-] EMBL AU166853             [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNGAAAACACATCGAACTTTATTAAGCAGGAACAGATCTAGGGAATAAACCCCATTACATNTCCAAGCAAAAGAGCCATCCTTAAAAAAGGNGGGTTAACTGAACTACNAAAGCAACCTTCCTGAAATAACCTAACAT     CAAAAAAAGGAGCAAGTCGACAGGGATNTGNGGCGAAGCCGCNACGACTGNTACCCTGGGCCTAAAAANATGTGCAGTCCGNTTGACAAACCGTTAATCCCCATNGGCTGCCTCCACGGAAACGGCACAANACCGAGGTTTGATGCTGAGCCGNAAATTTT GGNGTGGGCGT                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL AU183742             [      TTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAACACATC AACTTTATTAAGCAGGAACAGATCTAGGGAATAAACCCCATTACATATCCAAGCAAAAGAGCCATCCTTAANAAAGGNGGGTTAACTGAACTACNAAAGCAACCTTCCTGAAATAACCTAACAT     CANAAAAAGGAGCAAGTCGACAGGGATCTGCGGNNAAGCCGCGACGACTGNTACCCTGGGCCTNAAAAGATGTGCAGTCCGNTTGACAAACCGTTAATCCCCATCGGNTGCCTCCACGGAAACGGCACAAGACCGAGGTTTGATGCTGANCCGTANATTTT GGTGTGTGCGTCACCGGACTCAGCAAAGGATCCCCACGGGGCTCATCAGGNGGTCCGAGCTCAACCCGAATGACAAACCCTACAT GGTTTNTT CT GTTAGGGAAC                                                                                                                                                                                                                                                                                                         ]
[-] EMBL AU182008             [                TTTTTTTTTTTTTTTTGGAAAACACATC AACTTTATTAAGCAGGAACAGATCTAGGGAATAAACCCCATTACATATCCAAGCAAAAGAGCCATCCTTAANAAAGGAGGGTTAACTGAACTACNAAAGCAACCTTCCTGAAATAACCTAACAT     CANAAAAAGGAGCAAGTCGACAGGGATCTGCGGCGAAGCCGCNACNACTGNTACCCTGGGCCTNAAAANATGTGCAGTCCGNTTGACAAACCGTTAATCCCCATCGGNTGCCTCCACGGAAACGGCACAANACCGAGGTTTGATGCTGAGCCGTAAATTTT GGNGTGTGCGTCACCGGACTCANCAAAGGATCCCCACGGGGCTCATCAGGGGGTCCGAGCTCAACCCGAATGACAAACCCTACAT GGTTTNTT TT GTTAGGGAACAACA GGATAGAT                                                                                                                                                                                                                                                                                            ]
[-] EMBL C98071               [                     TTTTTTTTTTTTGAAAACACATC AACTTTATTAAGCAGGAACAGANCNAGGGAATAAACCCCATTACATATCCAAGCAAAAGANCCATCCTTAAGAAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL BI805893             [                      TTTTTTTTTTGGAAAACACATC AACTTTATTAAGCNGGAACAGATCTAGGGAATAAACCCCATTACATATCCAAGCAAAAGAGCCATCCTTAAGAAAGGAGAGTTAACTGAACTACGAAAGCAACCTTCCTGAAATAACCTAACATCAGAACAGAAAAAGGAGCAAGTCGACAGGGATCTGCGGCGAAGCCGCGACGACTGCTACCCTGGGCCTCAAAAGATGTGCAGTCCGCTTGACAAACCGTTAATCCCCATCGGCTGCCTCCACGGAAACGGCACAAGACCGAGGTTTGATGCTGAGCCGTAGATTTT GGTGTGTGCGTCACCGGACTCAGCAAAGGATCCCCACGGGGCTCATCAGGTGGTCCGAGCTCAACCCGAATGACAAACCCAACAT GGTTTCTT CT GTTAGGGAACAACA GGATAGATGAAT CCGAA G AACA GCCAACC TTCAAGGAAGAAGCACTTGAATGGCTGCAAATCAG TTCTGTCCT GCTGACNATG ATGGA GATGGCTGAG AAAGAGATGGCCTGC CCATGAAA AACGAAACAAACTGGAAGCAA                                                                                                                                          ]
[-] EMBL BI805980             [                       TTTTTTTTTTGAAAACACATC AACTTTATTAAGCAGGAACAGATCTAGGGAATAAACCCCATTACATATCCAAGCAAAAGAGCCATCCTTAAGAAAGGAGAGTTAACTGAACTACGAAAGCAACCTTCCTGAAATAACCTAACATCAGAACAGAAAAAGGAGCAAGTCGACAGGGATCTGCGGCGAAGCCGCGACGACTGCTACCCTGGGCCTCAAAAGATGTGCAGTCCGCTTGACAAACCGTTAATCCCCATCGGCTGCCTCCACGGAAACGGCACAAGACCGAGGTTTGATGCTGAGCCGTAAATTTG GGTGTGTGCGTCACCGGACTCAGCAAAGGATCCCCACGGGGCTCATCAGGTGGTCCGAGCTCAACCCGAATGACAAA CCAAAAT GGTTTCTT CT GTNAGGGAACAACA GGATAGATGAAT CCGAAGG AACANGCCAACCTTTCAAagg                                                                                                                                                                                                                                                          ]
[-] EMBL AU182003             [                        TTTTTTTTTGAAAACACATC AACTTTATTAAGCAGGAACAGATCTAGGGAATAAACCCCATTACATATCCAAGCAAAAGAGCCATCCTTAANAAAGGAGGGTTAACTGAACTACGAAAGCAACCTTCCTGAAATAACCTAACAT     CAGAAAAAGGAGCAAGTCGACAGGGATCTGCGGCGAAGCCGCGACGACTGCTACCCTGGGCCTCAAAAGATGTGCAGTCCGCTTGACAAACCGTTAATCCCCATCGGCTGCCTCCACGGAAACGGCACAAGACCGAGGTTTGATGCTGAGCCGTAAATTTT GGTGTGTGCGTCACCGGACTCAGCAAAGGATCCCCACGGGGCTCATCAGGTGGTCCGAGCTCAACCCGAATGACAAACCCTACAT GGTTTCTT CT GTTAGGGAACAACA GGATAGATGAAT CCGAA G AACA GCCNACC TTC                                                                                                                                                                                                                                                               ]
[-] EMBL AU069477             [                        TTTTTTTTTGAAAACACATC AACTTTATTAAGCAGGAACAGATCTAGGGAATAAACCCCATTACATATCCAAGCAAAAGAGCCATCCTTAAGAAAGGAGGGTTAACTGAACTACGAAAGCAACCTTCCTGAAATAACCTAACAT     CAGAAAAAGGAGCAAGTCGACAGGGATCTGCGGCGAAGCCGCGACGACTGCTACCCTGGGCCTCAAAAGATGTGCAGTCCGCTTGACAAACCGTTAATCCCCATCGGCTGCCTCCACGGAAACGGCACAAGACCGAGGTTTGATGCTGAGCCGTAGATTTT GGTGTGTGCGTCACCGGACTCAGCAAAGGATCCCCACGGGGCTCATCAGGTGGTCCGAGCTCAACCCGAATGACAAACCCTACAT GGTTTCTT CT GTTAGGGAACAACA GGATAGATGAATCCCGAA G AACA GCCAACC TTCAAGGAAGAAGCACTTGAATGGCTGCAAATCAGCTTCTGTCCT GCTGA GATG ATGGA GATGGCTGAG AAAGAGATGGCCTGCACCATGAAACAACGACAC AACTGAAAGCAACTGGAAGCAACGACGTGGGAGACAGCCCTCGCGCCGNCACTTGTCGCCGCAAGCCGCGTTNCACACCATCGCCGGCGCTACAGACTGGATCGGCGACGCCCGCCGTTACCACGGGCCCGGGACCGAACCCGTTGCCGC]
[-] EMBL BI806802             [                         TTTTTTTTGAAAACACATC AACTTTATTAAGCAGGAACAGATCTAGGGAATAAACCCCATTACATATCCAAGCAAAAGAGCCATCCTTAAGAAAGGAGAGTTAACTGAACTACGAAAGCAACCTTCCTGAAATAACCTAACATCAGAACAGAAAAAGGAGCAAGTCGACAGGGATCTGCGGCGAAGCCGCGACGACTGCTACCCTGGGCCTCAAAAGATGTGCAGTCCGCTTGACAAACCGTTAATCCCCATCGGCTGCCTCCACGGAAACGGCACAAGACCGAGGTTTGATGCTGAGCCGTAGATTTT GGTGTGTGCGTCACCGGACTCAGCAAAGGATCCCCACGGGGCTCATCAGGTGGTCCGAGCTCAACCCGAATGACAAACCCAACAT GGTTTCTT CT GTTAGGGAACAACA GGATAGATGAAT CCGAA G AACA GCCAACC TTCAAGGAAGAAGCACTTGAATGGCTGCAAATCAG                                                                                                                                                                                                                               ]
[-] EMBL AU182607             [                          TTTTTTTGAAAACACATC AACTTTATTAAGCAGGAACAGATCTAGGGAATAAACCCCATTACATATCCAAGCAAAAGAGCCATCCTTAAGAAAGGAGGGTTAACTGAACTACGAAAGCAACCTTCCTGAAATAACCTAACAT     CAGAAAAAGGAGCAAGTCGACAGGGATCTGCGGCGAAGCCGCGACGACTGCTACCCTGGGCCTCAAAAGATGTGCAGTCCGCTTGACAAACCGTTAATCCCCATCGGCTGCCTCCACGGAAACGGCACAAGACCGAGGTTTGATGCTGAGCCGTAGATTTT GGTGTGTGCGTCACCGGACTCAGCAAAGGATCCCCACGGGGCTCATCAGGTGGTCCGAGCTCAACCCGAATGACAAACCCTACAT GGTTTCTT CT GTTAGGGAACAACA GGATAGATGAAT CCGAA G AACA GC                                                                                                                                                                                                                                                                        ]
[-] EMBL AU182558             [                          TTTTTTTGAAAACACATC AACTTTATTAAGCAGGAACAGATCTAGGGAATAAACCCCATTACATATCCAAGCAAAAGAGCCATCCTTAAGAAAGGAGGGTTAACTGAACTACGAAAGCAACCTTCCTGAAATAACCTAACAT     CAGAAAAAGGAGCAAGTCGACAGGGATCTGCGGCGAAGCCGCGACGACTGCTACCCTGGGCCTCAAAAGATGTGCAGTCCGCTTGACAAACCGTTAATCCCCATCGGCTGCCTCCACGGAAACGGCACAAGACCGAGGTTTGATGCTGAGCCGTAGATTTT GGTGTGTGCGTCACCGGACTCAGCAAAGGATCCCCACGGGGCTCATCAGGTGGTCCGAGCTCAACCCGAATGACAAACCCTACAT GGTTTCTT CT GTTAGGGAACAACA GGATAGATGAA                                                                                                                                                                                                                                                                                         ]
[-] EMBL AU166580             [                           TTTTTTGAAAACACATC AACTTTATTAAGCAGGAACAGATCTAGGGAATAAACCCCATTACATATCCAAGCAAAAGAGCCATCCTTAAGAAAGGAGGGTTAACTGAACTACGAAAGCAACCTTCCTGAAATAACCTAACAT     CAGAAAAAGGAGCAAGTCGACAGGGATCTGCGGCGAAGCCGCGACGACTGCTACCCTGGGCCTCAAAAGATGTGCAGTCCGCTTGACAAACCGTTAATCCCCATCGGCTGCCTCCACGGAAACGGCACAAGACCGAGGTTTGATGCTGAGCCGTAGATTTT GGTGTGTGCGTCACCGGACTCAGCAAAGGATCCCCACGGGGCTCATCAGGTGGTCCGAGCTCAACCCGAATGACAAACCCTACAT GGTTTCTT CT GTTAGGGAACAACA GGATAGATGAAT CCGAA G AACA GCCAACC TTCAAGGAA                                                                                                                                                                                                                                                         ]
[-] EMBL BI805995             [                           TTTTTTGAAAACACATC AACTTTATTAAGCAGGAACAGATCTAGGGAATAAACCCCATTACATATCCAAGCAAAAGAGCCATCCTTAAGAAAGGAGAGTTAACTGAACTACGAAAGCAACCTTCCTGAAATAACCTAACATCAGAACAGAAAAAGGAGCAAGTCGACAGGGATCTGCGGCGAAGCCGCGACGACTGCTACCCTGGGCCTCAAAAGATGTGCAGTCCGCTTGACAAACCGTTAATCCCCATCGGCTG CTCCACGGAAACGGCACAAGACCGAGGTTTGATGCTGAGCCGTAGATTTTGGGTGTGTGCGTCACCGGACTCAGCAAAGGATCCCCACGGGGCTCATCAGGTGGTCCGAGCTCAACCCGAATGACAAA CCAACATGGGTTTCTTCCTGGTTAGGGAACAACAGGGATAGATGAAT CCGAA GAAACA GGCAA C TTCAAGGAAGAAGCACTTGAATGGCTGC AATCAGCTTCTGTCCTGGCTGA GATGCATGGAGGATGGCTGAGAAAAGAG                                                                                                                                                                                  ]
[-] EMBL AU182338             [                            TTTTTGAAAACACATC AACTTTATTAAGCAGGAACAGATCTAGGGAATAAACCCCATTACATATCCAAGCAAAAGAGCCATCCTTAAGAAAGGAGGGTTAACTGAACTACGAAAGCAACCTTCCTGAAATAACCTAACAT     CAGAAAAAGGAGCAAGTCGACAGGGATCTGCGGCGAAGCCGCGACGACTGCTACCCTGGGCCTCAAAAGATGTGCAGTCCGCTTGACAAACCGTTAATCCCCATCGGCTGCCTCCACGGAAACGGCACAAGACCGAGGTTTGATGCTGAGCCGTAGATTTT GGTGTGTGCGTCACCGGACTCAGCAAAGGATCCCCACGGGGCTCATCAGGTGGTCCGAGCTCAACCCGAATGACAAACCCTACAT GGTTTCTT CT GTTAGGGAACAACA GGATAGATGAAT CCGAA G AACA GCCAACC TTCAAGG                                                                                                                                                                                                                                                           ]
[-] EMBL AA749689             [                                                                                                                                                                                                                                                                                                                                                                                       GGCTCATCAGGTGGTCC NGCTCNNNNNGAATGACAAACCCTACAT GGTTTCTT CT GTTAGGGAACAACA GGATAGATGAAT CCGAA G AACA GCCAACC TTCAAGGAAGAAGCACTTGAATG                                                                                                                                                                                                                                           ]


>consensus_16331#2 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAACACATCAACTTTATTAAGCAGG AACAGATCTAGGGAATAAACCCCATTACATATCCAAGCAAAAGAGCCATCCTTAAGAAAG GAGGGTTAACTGAACTACGAAAGCAACCTTCCTGAAATAACCTAACATCAGAAAAAGGAG CAAGTCGACAGGGATCTGCGGCGAAGCCGCGACGACTGCTACCCTGGGCCTCAAAAGATG TGCAGTCCGCTTGACAAACCGTTAATCCCCATCGGCTGCCTCCACGGAAACGGCACAAGA CCGAGGTTTGATGCTGAGCCGTAGATTTTGGTGTGTGCGTCACCGGACTCAGCAAAGGAT CCCCACGGGGCTCATCAGGTGGTCCGAGCTCAACCCGAATGACAAACCCTACATGGTTTC TTCTGTTAGGGAACAACAGGATAGATGAATCCGAAGAACAGCCAACCTTCAAGGAAGAAG CACTTGAATGGCTGCAAATCAGCTTCTGTCCTGCTGAGATGATGGAGATGGCTGAGAAAG AGATGGCCTGCCCATGAAAAACGAAACAAACTGGAAGCAACTGGAAGCAACGACGTGGGA GACAGCCCTCGCGCCGNCACTTGTCGCCGCAAGCCGCGTTNCACACCATCGCCGGCGCTA CAGACTGGATCGGCGACGCCCGCCGTTACCACGGGCCCGGGACCGAACCCGTTGCCGC



consensusID : consensus_16331#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 686
fasta sequence
                              [ACCCCACGGGAAGGCGATCCATGGCGGCGGCGGCGGGTTGGCTCCGGCGAGCGGCAG-GGCGGCGGCGGCGCCTCGCCTGCCTTCAGGCCTTCCTATACTACCTACTCCCCCTCCAGCCCCTCTCACAGAGGCCCAATCGTTCGTGCTCCCGGGCATAGGCACCGCCGT-CGCCGGCGGCATGGACCTCATGGCCGTTCCCAAGAAAAAGGTCTCAAAATACAAGAAGGGTTTGAGGAATGGACCGAAAGCATTGAAGCCGGTTCCAGTGATTGTCCGTTGCAGGTGCTGTGGCCGAGTGAAGCTGCCCCACTTCTACTGCTGTAGCGGAGAAAAAGGGAACCCCGGCGACTCAAGCTCATAAACCTGTTCTGTTTCTCCCCAAGTTCAGTCTGCACTCAGCACATCAAGCAATGTCTGAACACTATTCCACCATGAACGTTTTCAGATCTCATTTTGTGTTCGGCCGCTGTTCTGTTTTCAAGCTTTTTAATCAGTGTA-CACACTTTAAACCCAGCTTGGATTT-CAAAACTCCCCTTGTCAAAAACTCAAATGCCACTCGTGACATGAATGGATGCATTCTGTCTGAGACAAGAACCAAATGTGTGCATGTGCCTTGCTAGAAGAAAGAAATAAAGGGCCTCATC--TTTTTCGCTTAAAAAAAAAAAAAAAAANNAAAAAAAAAAANA]

[+] EMBL AU160932             [ACCCCACGGGAAGGCGATCCATGGCGGCGGCGGCGGGTTGGCTCCGGCGAGCGGCAG GGCGGCGGCGGCGCCTCGCCTGCCTTCAGGCCTTCCTATACTACCTACTCCCCCTCCAGCCCCTCTCACAGAGGCCCAATCGTTCGTGCTCCCGGGCATAGGCACCGCCGTCCGCCGGCGGCATGGACCTCATGGCCGTTCCCAAGAAAAAGGTCTCAAAATACAAGAAGGGTTTGAGGAATGGACCGAAAGCATTGAAGCCGGTTCCAGTGATTGTCCGTTGCAGGTGCTGTGGCCGAGTGAAGCTGCCCCACTTCTANTGCTGTAGCGGAGAAAAAGGGAA CCCGGCGACTCAAGCTCATAAANCTGTTCTGT                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK121913             [     ACGGGAAGGCGATCCATGGCGGCGGCGGCGGGTTGGCTCCGGCGAGCGGCAGCGGCGGCGGCGGCGCCTCGCCTGCCTTCAGGCCTTCCTATACTACCTACTCCCCCTCCAGCCCCTCTCACAGAGGCCCAATCGTTCGTGCTCCCGGGCATAGGCACAGCCGT CGCCGGCGGCATGGACCTCATGGCCGTTCCCAAGAAAAAGGTCTCAAAATACAAGAAGGGTTTGAGGAATGGACCGAAAGCATTGAAGCCGGTTCCAGTGATTGTCCGTTGCAGGTGCTGTGGCCGAGTGAAGCTGCCCCACTTCTACTGCTGTAGCGGAGAAAAAGGGAACCCCGGCGACTCAAGCTCATAAACCTGTTCTGTTTCTCCCCAAGTTCAGTCTGCACTCAGCACATCAAGCAATGTCTGAACACTATTCCACCATGAACGTTTTCAGATCTCATTTTGTGTTCGGCCGCTGTTCTGTTTTCAAGCTTTTTAATCAGTGTA CACACTTTAAACCCAGCTTGGATTT CAAAACTCCCCTTGTCAAAAACTCAAATGCCACTCGTGACATGAATGGATGCATTCTGTCTGAGACAAGAACCAAATGTGTGCATGTGCCTTGCTAGAAGAAAGAAATAAAGGGCCTCATC  T                                         ]
[+] EMBL BI801239             [                                                                                                                               AGAGGCCCAATCGTTCGTGCTCCCGGGCATAGGC CCGCCGT CGCC GCGGCATGGACCTCAT GCCGTTCCCAAGAAAAAGGTCTCAAAATACAAGAAGGGTTTGAGGAATGGACCGAAAGCATTGAAGCCGGTTCCAGTGATTGTCCGTTGCAGGTGCTGTGGCCGAGTGAAGCTGCCCCACTTCTACTGCTGTAGCGGAGAAAAAGGGAACCCCGGCGACTCAAGCTCATAAACCTGTTCTGTTTCTCCCCAAGTTCAGTCTGCACTCAGCACATCAAGCAATGTCTGAACACTATTCCACCATGAACGTTTTCAGATCTCATTTTGTGTTCGGCCGCTGTTCTGTTTTCAAGCTTTTTAATCAGTGTA CACACTTTAAACCCAGCTTGGATTT GAAAACTCCCCTTGTCAAAAACTCAAATGCCACTCGTGACATGAATGGATGCATTCTGTCTGAGAC AGAACC AATGTGTGCATGTGCCTTGCTAGAAGAAAGAAATAAAGGGCCTCATC   TTTTCGCTTAAAAAAAA                        ]
[+] EMBL BM421090             [                                                                                                                                                                                                                                                                                                                                       ccgGAAAAAGGGAACCCCGGCGACTCAAGCTCATAAACCTGTTCTGTTTCTCCCCAAGTTCAGTCTGCACTCAGCACATCAAGCAATGTCTGAACACTATTCCACCATGAACGTTTTCAGATCTCATTTTGTGTTCGGCCGCTGTTCTGTTTTCAAGCTTTTTAATCAGTGTA CACACTTTAAACCCAGCTTGGATTT GAAAACTCCCCTTGTCAAAAACTCAAATGCCACTCGTGACATGAATGGATGCATTCTGTCTGAGACAAGAACC AATGTGTGCATGTGCCTTGCTAGAAGAAAGAAATAAAGGGCCTCATC   TTTTCGCTTAAAAAAAAAA                      ]
[+] EMBL AU160933             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GCTTTTTAATCAGTGTACCACACTTTAANCCCAGCTTGGATTTCCAAAACTCCCCTTGTCAAAAACTCAAATGCCACTCGTGNCATGAATGGATGCACTCTGTCTGAGNCAAGAACCAAATGTGTGCATGTGCCTTGCTAGAAGAAAGAAATAAAGGGCCTCATCTTTTTTTTGCTAAAAAAACAAAAAAAAAANNAAAAAAAAAAANA]


>consensus_16331#3 ACCCCACGGGAAGGCGATCCATGGCGGCGGCGGCGGGTTGGCTCCGGCGAGCGGCAGGGC GGCGGCGGCGCCTCGCCTGCCTTCAGGCCTTCCTATACTACCTACTCCCCCTCCAGCCCC TCTCACAGAGGCCCAATCGTTCGTGCTCCCGGGCATAGGCACCGCCGTCGCCGGCGGCAT GGACCTCATGGCCGTTCCCAAGAAAAAGGTCTCAAAATACAAGAAGGGTTTGAGGAATGG ACCGAAAGCATTGAAGCCGGTTCCAGTGATTGTCCGTTGCAGGTGCTGTGGCCGAGTGAA GCTGCCCCACTTCTACTGCTGTAGCGGAGAAAAAGGGAACCCCGGCGACTCAAGCTCATA AACCTGTTCTGTTTCTCCCCAAGTTCAGTCTGCACTCAGCACATCAAGCAATGTCTGAAC ACTATTCCACCATGAACGTTTTCAGATCTCATTTTGTGTTCGGCCGCTGTTCTGTTTTCA AGCTTTTTAATCAGTGTACACACTTTAAACCCAGCTTGGATTTCAAAACTCCCCTTGTCA AAAACTCAAATGCCACTCGTGACATGAATGGATGCATTCTGTCTGAGACAAGAACCAAAT GTGTGCATGTGCCTTGCTAGAAGAAAGAAATAAAGGGCCTCATCTTTTTCGCTTAAAAAA AAAAAAAAAAANNAAAAAAAAAAANA



consensusID : consensus_16331#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 595
fasta sequence
                              [GGCGGCCGAGGGCTGTCTCCCACGTCGTGGCTTCCAGTTGTGTCGTTGTTTCATGGTGCAGCCATCTCTTTCTCAGCCATCTCCATCATCTCAGCAGGACAGAAGCTGATTTGCAGCCATTCAAGTGCTTCTTCCTTGAAGGTCTCAAAATACAAGAAGGGTTTGAGGAATGGACCGAAAGCATTGAAGCCGGTTCCAGTGATTGTCCGTTGCAGGTGCTGTGGCCGAGTGAAGCTGCCCCACTTCTACTGCTGTAGCGGAGAAAAAGGGAACCCCGGCGACTCAAGCTCATAAACCTGTTCTGTTTCTCCCCAAGTTCAGTCTGCACTCAGCACATCAAGCAATGTCTGAACACTATTCCACCATGAACGTTTTCAGATCTCATTTTGTGTTCGGCCGCTGTTCTGTTTTCAAGCTTTTTAATCAGTGTACACACTTTAAACCCAGCTTGGATTTCAACTCCCCTTGTCAAAAACTCAAATGCCACTCGTGACATGAATGGATGCATTCTGTCTGAGACAAGAACCAATGTGTGCATGTGCCTTGCTAGAAGAAAGAAATAAAGGGCCTCATCTTTTTTTTGCTAAAAAAAAAA]

[+] EMBL BI806945             [GGCGGCCGAGGGCTGTCTCCCACGTCGTGGCTTCCAGTTGTGTCGTTGTTTCATGGTGCAGCCATCTCTTTCTCAGCCATCTCCATCATCTCAGCAGGACAGAAGCTGATTTGCAGCCATTCAAGTGCTTCTTCCTTGAAGGTCTCAAAATACAAGAAGGGTTTGAGGAATGGACCGAAAGCATTGAAGCCGGTTCCAGTGATTGTCCGTTGCAGGTGCTGTGGCCGAGTGAAGCTGCCCCACTTCTACTGCTGTAGCGGAGAAAAAGGGAACCCCGGCGACTCAAGCTCATAAACCTGTTCTGTTTCTCCCCAAGTTCAGTCTGCACTCAGCACATCAAGCAATGTCTGAACACTATTCCACCATGAACGTTTTCAGATCTCATTTTGTGTTCGGCCGCTGTTCTGTTTTCAAGCTTTTTAATCAGTGTACACACTTTAAACCCAGCTTGGATTTCAACTCCCCTTGTCAAAAACTCAAATGCCACTCGTGACATGAATGGATGCATTCTGTCTGAGACAAGAACCAATGTGTGCATGTGCCTTGCTAGAAGAAAGAAATAAAGGGCCTCATCTTTTTTTTGCTAAAAAAAAAA]


>consensus_16331#4 GGCGGCCGAGGGCTGTCTCCCACGTCGTGGCTTCCAGTTGTGTCGTTGTTTCATGGTGCA GCCATCTCTTTCTCAGCCATCTCCATCATCTCAGCAGGACAGAAGCTGATTTGCAGCCAT TCAAGTGCTTCTTCCTTGAAGGTCTCAAAATACAAGAAGGGTTTGAGGAATGGACCGAAA GCATTGAAGCCGGTTCCAGTGATTGTCCGTTGCAGGTGCTGTGGCCGAGTGAAGCTGCCC CACTTCTACTGCTGTAGCGGAGAAAAAGGGAACCCCGGCGACTCAAGCTCATAAACCTGT TCTGTTTCTCCCCAAGTTCAGTCTGCACTCAGCACATCAAGCAATGTCTGAACACTATTC CACCATGAACGTTTTCAGATCTCATTTTGTGTTCGGCCGCTGTTCTGTTTTCAAGCTTTT TAATCAGTGTACACACTTTAAACCCAGCTTGGATTTCAACTCCCCTTGTCAAAAACTCAA ATGCCACTCGTGACATGAATGGATGCATTCTGTCTGAGACAAGAACCAATGTGTGCATGT GCCTTGCTAGAAGAAAGAAATAAAGGGCCTCATCTTTTTTTTGCTAAAAAAAAAA



consensusID : consensus_16331#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 590
fasta sequence
                              [TCNCCTTTATTAAGCAGGAACAGATCTAGGGAATAAACCCCATTACATATCCAAGCAAAAGAGCCATCCTTAAGAAAGGAGGGTTAACTGAACTACGAAAGCAACCTTCCTGAAATAACCTAACATCAGAAAAAGGANCAAGTCNACAGGGATCTGCGGNGAAACCGCGACNANTGCTACCCTGGGCCTCAAAANATNTNCAGTCCGCTTGACAAACCGTTAATCCCCATCGGCTGCCTCCACGGAAACGGNACAANACCGANGTTTGATGCTTGAACCCGTAAATTTTGGTGTTGTGCGTTCCCCGGAATCCNCNAANGATCCCCCCNGGGGCTCATCCAGTTGGGTCCCGAACTTCCAACCCCAATTAANAAACCCCTAAATTGTTTNCTTCCTNTTTTNGGGGAACNCCCCGGATTANNTTNATCCAAAAAAANANNCCCCCCTCCCNGGNAAAAAAACCCTNNANTNGGGTGCAATNCCCNTCCTTTTCCNCTAAAATANTGGAAAAGNGGGNAAAAAAAAAATTNGGCNGCCCCTTNAACCCCNACCCCTTAANCCNTNGACCNAATTTTNGAAAAACCCCCCCC]

[+] EMBL BE229138             [TCNCCTTTATTAAGCAGGAACAGATCTAGGGAATAAACCCCATTACATATCCAAGCAAAAGAGCCATCCTTAAGAAAGGAGGGTTAACTGAACTACGAAAGCAACCTTCCTGAAATAACCTAACATCAGAAAAAGGANCAAGTCNACAGGGATCTGCGGNGAAACCGCGACNANTGCTACCCTGGGCCTCAAAANATNTNCAGTCCGCTTGACAAACCGTTAATCCCCATCGGCTGCCTCCACGGAAACGGNACAANACCGANGTTTGATGCTTGAACCCGTAAATTTTGGTGTTGTGCGTTCCCCGGAATCCNCNAANGATCCCCCCNGGGGCTCATCCAGTTGGGTCCCGAACTTCCAACCCCAATTAANAAACCCCTAAATTGTTTNCTTCCTNTTTTNGGGGAACNCCCCGGATTANNTTNATCCAAAAAAANANNCCCCCCTCCCNGGNAAAAAAACCCTNNANTNGGGTGCAATNCCCNTCCTTTTCCNCTAAAATANTGGAAAAGNGGGNAAAAAAAAAATTNGGCNGCCCCTTNAACCCCNACCCCTTAANCCNTNGACCNAATTTTNGAAAAACCCCCCCC]


>consensus_16331#5 TCNCCTTTATTAAGCAGGAACAGATCTAGGGAATAAACCCCATTACATATCCAAGCAAAA GAGCCATCCTTAAGAAAGGAGGGTTAACTGAACTACGAAAGCAACCTTCCTGAAATAACC TAACATCAGAAAAAGGANCAAGTCNACAGGGATCTGCGGNGAAACCGCGACNANTGCTAC CCTGGGCCTCAAAANATNTNCAGTCCGCTTGACAAACCGTTAATCCCCATCGGCTGCCTC CACGGAAACGGNACAANACCGANGTTTGATGCTTGAACCCGTAAATTTTGGTGTTGTGCG TTCCCCGGAATCCNCNAANGATCCCCCCNGGGGCTCATCCAGTTGGGTCCCGAACTTCCA ACCCCAATTAANAAACCCCTAAATTGTTTNCTTCCTNTTTTNGGGGAACNCCCCGGATTA NNTTNATCCAAAAAAANANNCCCCCCTCCCNGGNAAAAAAACCCTNNANTNGGGTGCAAT NCCCNTCCTTTTCCNCTAAAATANTGGAAAAGNGGGNAAAAAAAAAATTNGGCNGCCCCT TNAACCCCNACCCCTTAANCCNTNGACCNAATTTTNGAAAAACCCCCCCC



consensusID : consensus_16331#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 364
fasta sequence
                              [TTTTTTACGTAGAACCATACTTATGACTTTCATCACAACAACCAATATTAGTGTTCTTTTTTTTTAAAACACATCAACTTTGTTAAGCAAGAGCAGAATTAGGGGATAAACCCCATTACATAACCAAGGATAAAAGCTGAAAGCAAAAGAGCCACCCCTGAGAAGGGAGGGTTAACTGAACTACGAAATCAATCTTCCTGAAATAACCTAATAGCAGAAAAAGGAGCAAGTCGATAGGGATCTGCGGCGAAG-CCGCGACGACTGC-CACCCTGAGCCTCAAAAGATGTGCACTCCGCTTGACAAACCGTTAATCCCCATCAGCTGCCTCCACGGAAACGGCACAAGACCGAGGTTTGTTGCTGAG]

[+] EMBL CF327906             [TTTTTTACGTAGAACCATACTTATGACTTTCATCACAACAACCAATATTAGTGTTCTTTTTTTTTAAAACACATCAACTTTGTTAAGCAAGAGCAGAATTAGGGGATAAACCCCATTACATAACCAAGGATAAAAGCTGAAAGCAAAAGAGCCACCCCTGAGAAGGGAGGGTTAACTGAACTACGAAATCAATCTTCCTGAAATAACCTAATAGCAGAAAAAGGAGCAAGTCGATAGGGATCTGCGGCGAAG CCGCGACGACTGC CACCCTGAGCCTCAAAAGATGTGCACTCCGCTTGACAAACCGTTAATCCCCATCAGCTGCCTCCACGGAAACGGCACAAGACCGAGGTTTGTTGCTGA ]
[-] EMBL CF327907             [ TTTTTACGTAGAACCATACTTATGACTTTCATCACAACAACCAATATTAGTGTTCTTTTTTTTTAAAACACATCAACTTTGTTAAGCAAGAGCAGAATTAGGGGATAAACCCCATTACATAACCAAGGATAAAAGCTGAAAGCAAAAGAGCCACCCCTGAGAAGGGAGGGTTAACTGAACTACGAAATCAATCTTCCTGAAATAACCTAATAGCAGAAAAAGGAGCAAGTCGATAGGGATCTGCGGCGAAG CCGCGACGACTGC CACCCTGAGCCTCAAAAGATGTGCACTCCGCTTGACAAACCGTTAATCCCCATCAGCTGCCTCCACGGAAACGGCACAAGACCGAGGTTTGTTGCTGAG]
[+] EMBL OSC143               [                                        ACCAATATTAGTGTTCTTTTTTTTTAAAACACATCAACTTTGTTAAGCAAGAGCAGAATTAGGGGATAAACCCCATTACATAACCAAGGATAAAAGCTGAAAG AAAAGAGCCACCCCTGAGAAGGGAGGGTTAACTGAACTACGAAATCAATCTTCCTGAAATAACCTAATAGCAGAAAAAGGAGCAAGTCGATAGGGATCTNCGGCGACGACCG NAC  TTGCTTACCCTGGGCCTCAAAAGATGTGCACTCCGCTTGACAAACCGTTAATCCCCATCAGCTGCCTCCACGGAAACGGC                        ]


>consensus_16331#6 TTTTTTACGTAGAACCATACTTATGACTTTCATCACAACAACCAATATTAGTGTTCTTTT TTTTTAAAACACATCAACTTTGTTAAGCAAGAGCAGAATTAGGGGATAAACCCCATTACA TAACCAAGGATAAAAGCTGAAAGCAAAAGAGCCACCCCTGAGAAGGGAGGGTTAACTGAA CTACGAAATCAATCTTCCTGAAATAACCTAATAGCAGAAAAAGGAGCAAGTCGATAGGGA TCTGCGGCGAAGCCGCGACGACTGCCACCCTGAGCCTCAAAAGATGTGCACTCCGCTTGA CAAACCGTTAATCCCCATCAGCTGCCTCCACGGAAACGGCACAAGACCGAGGTTTGTTGC TGAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_16331#1      ------------------------------------------------------------
consensus_16331#6      --------------------------------------------------TTTTTTACGT 10
consensus_16331#2      ------------------------------------------------------------
consensus_16331#5      ------------------------------------------------------------
consensus_16331#3      ACCCCACGGGAAGGCGATCCATGGCGGCGGCGGCGGGTTGGCTCCGGCGAGCGGCAGGGC 60
consensus_16331#4      ---------------------------------------------------------GGC 3
consensus_16331#0      ------------------------------------------------------------
                                                                                   

consensus_16331#1      ---------------------CTTTTTATTTTTTTTTTTAGGGGTCTTTTTTTTTAAAAC 39
consensus_16331#6      AGAACCATACTTATGACTTTCATCACAACAACCAATATTAGTGTTCTTTTTTTTTAAAAC 70
consensus_16331#2      ---------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAAC 39
consensus_16331#5      ------------------------------------------------------------
consensus_16331#3      GGCGGCGGCGCCTCGCCTGCCTTCAGGCCTTC--CTATACTACCTACTCCCCCTCCAGCC 118
consensus_16331#4      GGCCGAGGGCTGTCTCCCACGTCGTGGCTTCCAGTTGTGTCGTTGTTTCATGGTGCAGCC 63
consensus_16331#0      ------------------------------------------------------------
                                                                                   

consensus_16331#1      ACATCAACTTTGTTAAGCAAGAGCAGAATTAGGGGATAAACCCCATTACATAACCAAGGA 99
consensus_16331#6      ACATCAACTTTGTTAAGCAAGAGCAGAATTAGGGGATAAACCCCATTACATAACCAAGGA 130
consensus_16331#2      ACATCAACTTTATTAAGCAGGAACAGATCTAGGGAATAAACCCCATTACATATCCAAG-- 97
consensus_16331#5      ---TCNCCTTTATTAAGCAGGAACAGATCTAGGGAATAAACCCCATTACATATCCAAG-- 55
consensus_16331#3      -CCTCTCACAGAGGCCCAATCGTTCGTGCTCCCGGGCATAGGCACCGCCGTCGCCGGCGG 177
consensus_16331#4      ATCTCTTTCTCAGCCATCTCCATCATCTCAGCAGGACAGAAGCTGATTTGCAGCCATT-- 121
consensus_16331#0      ---------AGAGGCCCAATCGTTCGTGCTCCCGGGCATAGGCGCCGCCGTCGCCGGCGG 51
                                                        *   * *  *          **     

consensus_16331#1      TAAAAGCTGAAAGCAAAAGAGCCACCCCTGAGAAGGGAGGGTTAACTGAACTACGAAATC 159
consensus_16331#6      TAAAAGCTGAAAGCAAAAGAGCCACCCCTGAGAAGGGAGGGTTAACTGAACTACGAAATC 190
consensus_16331#2      -------------CAAAAGAGCCATCCTTAAGAAAGGAGGGTTAACTGAACTACGAAAGC 144
consensus_16331#5      -------------CAAAAGAGCCATCCTTAAGAAAGGAGGGTTAACTGAACTACGAAAGC 102
consensus_16331#3      CATG------GACCTCATGG-CCGTTCCCAAGAAAAAGGTCTCAA----AATACAAGA-- 224
consensus_16331#4      CAAG------TGCTTC--------TTCCT----TGAAGGTCTCAA----AATACAAGA-- 157
consensus_16331#0      CATGG-----TACCTCATGGTCCGTTCCCAAGAAAAAGGTCTCAA----AATACAAGA-- 100
                                                 *           *  * **    * *** * *  

consensus_16331#1      AATCTTCCTGAAATAACCTAATAGCA--GAAAAAGGAGCAAGT-------CGATAGGGAT 210
consensus_16331#6      AATCTTCCTGAAATAACCTAATAGCA--GAAAAAGGAGCAAGT-------CGATAGGGAT 241
consensus_16331#2      AACCTTCCTGAAATAACCTAACATCA--GAAAAAGGAGCAAGT-------CGACAGGGAT 195
consensus_16331#5      AACCTTCCTGAAATAACCTAACATCA--GAAAAAGGANCAAGT-------CNACAGGGAT 153
consensus_16331#3      AGGGTTTGAGGAATGGACCGAAAGCATTGAAGCCGGTTCCAGTGATTGTCCGTTGCAGGT 284
consensus_16331#4      AGGGTTTGAGGAATGGACCGAAAGCATTGAAGCCGGTTCCAGTGATTGTCCGTTGCAGGT 217
consensus_16331#0      AGGGTTTGAGGAATGGACCGAAAGCATTGAAGCCGGTTCCAGTGATTGTCCGTTGCAGGT 160
                       *   **   * ***   *  * * **  ***   **  * ***       *      * *

consensus_16331#1      -CTGCGGC-----GAAGCCGCGACGACTGCTACC-CTGGGCCTCAAAAGATGTGCACTCC 263
consensus_16331#6      -CTGCGGC-----GAAGCCGCGACGACTGCCACC-CTGAGCCTCAAAAGATGTGCACTCC 294
consensus_16331#2      -CTGCGGC-----GAAGCCGCGACGACTGCTACC-CTGGGCCTCAAAAGATGTGCAGTCC 248
consensus_16331#5      -CTGCGGN-----GAAACCGCGACNANTGCTACC-CTGGGCCTCAAAANATNTNCAGTCC 206
consensus_16331#3      GCTGTGGCCGAGTGAAGCTGCC-CCACTTCTACTGCTGTAGCGGAGAAAAAGGGAACCCC 343
consensus_16331#4      GCTGTGGCCGAGTGAAGCTGCC-CCACTTCTACTGCTGTAGCGGAGAAAAAGGGAACCCC 276
consensus_16331#0      GCTGTGGCCGAGTGAAGCTGCC-CCACTTCTACTGCTGTAGCGGAGAAAAAGGGAACCCC 219
                        *** **      *** * **  * * * * **  ***   *  * ** *     *  **

consensus_16331#1      GCTTGA-CAAACCGTTAATCCCCATCAGCTGCCTCCACGGAAACGGCACAAGACCGAGGT 322
consensus_16331#6      GCTTGA-CAAACCGTTAATCCCCATCAGCTGCCTCCACGGAAACGGCACAAGACCGAGGT 353
consensus_16331#2      GCTTGA-CAAACCGTTAATCCCCATCGGCTGCCTCCACGGAAACGGCACAAGACCGAGGT 307
consensus_16331#5      GCTTGA-CAAACCGTTAATCCCCATCGGCTGCCTCCACGGAAACGGNACAANACCGANGT 265
consensus_16331#3      GGCGACTCAAGCTCATAAACCTGTTCTGTT-TCTCCCCAAGTTCAGTCTGCACTCAGCAC 402
consensus_16331#4      GGCGACTCAAGCTCATAAACCTGTTCTGTT-TCTCCCCAAGTTCAGTCTGCACTCAGCAC 335
consensus_16331#0      GGTGACTCAAGCTCATAAACCTGTTCTGTT-TCTCCCCAAGTTCAGTCTGCACTCAGCAC 278
                       *      *** *   *** **   ** * *  **** *     * *        *     

consensus_16331#1      TTGTTGCT--GAGCCGTAGATTTTGGTGT-GTGCAT--CACTGGACTCAGCGAAGGATCC 377
consensus_16331#6      TTGTTGCT--GAG----------------------------------------------- 364
consensus_16331#2      TTGATGCT--GAGCCGTAGATTTTGGTGT-GTGCGT--CACCGGACTCAGCAAAGGATCC 362
consensus_16331#5      TTGATGCTTGAACCCGTAAATTTTGGTGTTGTGCGTT-CCCCGGAATCCNCNAANGATCC 324
consensus_16331#3      ATCAAGCA-ATGTCTGAACACTATTCCACCATGAACGTTTTCAGATCTCATTTTGTGTTC 461
consensus_16331#4      ATCAAGCA-ATGTCTGAACACTATTCCACCATGAACGTTTTCAGATCTCATTTTGTGTTC 394
consensus_16331#0      ATTAAGCA-ATGTCTGAACACTATTCCACCATGAACGTTTTCAGATCTCATTTTGTGTTC 337
                        *   **                                                     

consensus_16331#1      CCACGAGG-CTCATCATTGAATCTGAGGAGCTCTAACATCAACCCTGTCAACTGAAATTG 436
consensus_16331#6      ------------------------------------------------------------
consensus_16331#2      CCACGGGG-CTCATCA-------------------------------------------- 377
consensus_16331#5      CCCCNGGGGCTCATCC-------------------------------------AGTTGGG 347
consensus_16331#3      GGCCGCTGTTCTGTTTTCAAGCTT---------------------------TTTAATCAG 494
consensus_16331#4      GGCCGCTGTTCTGTTTTCAAGCTT---------------------------TTTAATCAG 427
consensus_16331#0      GGACGCTGTTCTGTTTTCAAGCTT---------------------------TTTAATCAG 370
                                                                                   

consensus_16331#1      CGCAGATGGTTCGAGCTCAACCCGAATGACAA-ACCCAGCATGGTTTCTTCTGTTAGGGA 495
consensus_16331#6      ------------------------------------------------------------
consensus_16331#2      ----GGTGGTCCGAGCTCAACCCGAATGACAA-ACCCTACATGGTTTCTTCTGTTAGGGA 432
consensus_16331#5      TCCCGAACTTCCAACCCCAATTAANAAACCCCTAAATTGTTTNCTTCCTNTTTTNGGGGA 407
consensus_16331#3      TGTACACACTTTAAACCCAGCTTGGATTTCAAAACTCCCCTTGTCAAAAACTCAAATGCC 554
consensus_16331#4      TGTACACACTTTAAACCCAGCTTGGATTTCAA--CTCCCCTTGTCAAAAACTCAAATGCC 485
consensus_16331#0      TGTACACACTTTAAACCCAGCTTGGATTGGAAAACTACCCTTGTGAAAAACTAAAATGCC 430
                                                                                   

consensus_16331#1      ACAAC--A---GGAAGGGTGAATCCGAAGAGCAGCCAACCTT----CAACGATGGAGCAC 546
consensus_16331#6      ------------------------------------------------------------
consensus_16331#2      ACAAC--A---GGATAGATGAATCCGAAGAACAGCCAACCTT----CAAGGAAGAAGCAC 483
consensus_16331#5      ACNCCCCG---GATTANNTTNATCCAAAAAAANANNCCCCCCTCCCNGGNAAAAAAACCC 464
consensus_16331#3      ACTCGTGACATGAATGGATGCATTCTGTCTGAGACAAGAACCAAATGTGTGCATGTGCCT 614
consensus_16331#4      ACTCGTGACATGAATGGATGCATTCTGTCTGAGACAAGAACCAA-TGTGTGCATGTGCCT 544
consensus_16331#0      ACTCGTGACATGAATGGATGCATTCTGTTTGTGACAAGAACCAAATGTGTGCATGTGCCT 490
                                                                                   

consensus_16331#1      TTGAATGGC-TGCAAATCAACTT--GTCTTGCTGAGATGATGGAGA--TGGTTGAGGAAG 601
consensus_16331#6      ------------------------------------------------------------
consensus_16331#2      TTGAATGGC-TGCAAATCAGCTTCTGTCCTGCTGAGATGATGGAGA--TGGCTGAGAAAG 540
consensus_16331#5      TNNANTNGGGTGCAATNCCCNTCCTTTTCCNCTAAAATANTGGAAAAGNGGGNAAAAAAA 524
consensus_16331#3      TGCTAGAAGAAAGAAATAAAGGGCCTCATCTTTTTCGCTTAAAAAAAAAAAAAAAAANNA 674
consensus_16331#4      TGCTAGAAGAAAGAAATAAAGGGCCTCATCTTTTTTTTGCTAAAAAAAAAA--------- 595
consensus_16331#0      TGCTAGAACAAAGAAATAAAGGGTCTTATTTTTCTCCTCGAAAATAAAAATCACCCACTT 550
                                                                                   

consensus_16331#1      AGATGGCCTGCACCATGAAACTGGAAGCAACGAGAAAGGGTGAGCTGCAACTGGAAGCAA 661
consensus_16331#6      ------------------------------------------------------------
consensus_16331#2      AGATGGCCTGCCCATGAAAAACGAAACAAACTGGAA----------GCAACTGGAAGCAA 590
consensus_16331#5      AAATTNGGCNGCCCCTTNAACCCCNACCCCTTAANC--------------CNTNGACCNA 570
consensus_16331#3      AAAAAAAAAANA------------------------------------------------ 686
consensus_16331#4      ------------------------------------------------------------
consensus_16331#0      CATTATCTCTTTTATTCTTATCTTTTCATATTTAAATTTGTGGGGGGGCCCGGTCCCCAA 610
                                                                                   

consensus_16331#1      CGACGCAGGAGACGGCCCTCGCGCCGCCACC-GTCGTCGCGGGCCGCGT-CCGCGCCGCA 719
consensus_16331#6      ------------------------------------------------------------
consensus_16331#2      CGACGTGGGAGACAGCCCTCGCGCCGNCACTTGTCGCCGCAAGCCGCGTTNCACACCATC 650
consensus_16331#5      ATTTTNGAAAAACCCCCCCC---------------------------------------- 590
consensus_16331#3      ------------------------------------------------------------
consensus_16331#4      ------------------------------------------------------------
consensus_16331#0      TTGTTCCTATAGTGAGTTTTTTTCTCCCGTATATTGATCATTGTGTTTCAACATATGTGA 670
                                                                                   

consensus_16331#1      GCCGCCGCTGAGGACTGGATCCGTGCTGCC-GCCGTCGCCACGGGC-------------- 764
consensus_16331#6      ------------------------------------------------------------
consensus_16331#2      GCCGGCGCTACAGACTGGATCGGCGACGCCCGCCGTTACCACGGGCCCGGGACCGAACCC 710
consensus_16331#5      ------------------------------------------------------------
consensus_16331#3      ------------------------------------------------------------
consensus_16331#4      ------------------------------------------------------------
consensus_16331#0      CTGGGTAAACCTTGAGATGTCACGACTGTATGTTGGGGGTGTTTCAATAACCTCACCCCC 730
                                                                                   

consensus_16331#1      ------------------------------------------------------------
consensus_16331#6      ------------------------------------------------------------
consensus_16331#2      GTTGCCGC---------------------------------------------------- 718
consensus_16331#5      ------------------------------------------------------------
consensus_16331#3      ------------------------------------------------------------
consensus_16331#4      ------------------------------------------------------------
consensus_16331#0      ATTGATATTTATATATTTAGGTTCTTTTCATTTTTTTTTTATTAACAATTGTTTTAATTA 790
                                                                                   

consensus_16331#1      ------------------------------------------------------------
consensus_16331#6      ------------------------------------------------------------
consensus_16331#2      ------------------------------------------------------------
consensus_16331#5      ------------------------------------------------------------
consensus_16331#3      ------------------------------------------------------------
consensus_16331#4      ------------------------------------------------------------
consensus_16331#0      ATTAGAAATATGGATCCCATCTTATTATTATTATTTACCTCAATGAATCTNGGAATATTC 850
                                                                                   

consensus_16331#1      -----------------------------------------
consensus_16331#6      -----------------------------------------
consensus_16331#2      -----------------------------------------
consensus_16331#5      -----------------------------------------
consensus_16331#3      -----------------------------------------
consensus_16331#4      -----------------------------------------
consensus_16331#0      ATTCTCTTAATCTCTTCTTTACTCCCCTTTATGATTGTTCT 891
                                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)