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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16361#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 24 consensus length = 962 fasta sequence
[CATGGACTGAGGAGTAGAAAAGGATCCAATCCACTTGCATTTCAGCTCAGGAAGCCTCTGCTACTTTGCTTGGCCTGTACAGTAATACAGATAAAGACCTGCAGTTCTTTGGTCTCTTTAGTGAGGACTGAGGAGTTTGGTTGGAGATTGTTGAGGAGATGGGCATCGTCGACGTTGTCTCCGAGTTCTGCTCCGTGCCGAGGACTCGCCGACACCTCAAGAAGAGGAAACAATTCCAGACAGTGGAGATGAAGGTGCGGATAGACTGCGAAGGCTGTGAAAGGAAGATCAAGAAGGCCCTTGAGGACATGAAAGGGGTGAGCTCGGTGGA-GGTGACGGCGAAGCA-GAACAAGGTGACGGTGACGGGGTACGTGGACGCCGGGAAGGTGATGCGGCGCGTGGCGTACAAGACCGGGAAGCGGGTGGAGCCATGGCCATACGTG-CCGTACGACA-C-GGTGGCGCACCCC-TACGCACCGGGCGCC-TACGACAAGAAGGCCCCCG-CGGGGTACGTGCGCAACGTGGTGTCCGA-CCCCTCCGCCGCACCGCTCGCCCGCGCCTCCTCCACCGAGGT-CCGCTACACCGCTGCCTTCAGCGACGAGAACCCCA-AC-G-CCTGCTCCGTCATGTAGCTAGCTGTGTGTCCCCGGGACGACGACGAAGCAGCCTAGCAGGGTGTTTTTGTTGCCCCTTGCAGCTGTAATAATATTCTGTGTGTCCAGATTCGCCATCCCTCAAAAATCTTTCATAGTATTATAGAAGGGAGGAAGTAGTAATTTTTCCAGCTGTAGTAATGTTCTTTGCTTTAGATAGGGTGTTGTGTTACTATTGGACTCTCTTTTGCTTGTGCTTTTGGTTTCTGATGTAAAATACTCCATCATGTTCTTGTTTGGTGAGATGAATCTTCAAATCTGCAAAGTTGCAGATC-GGTTGTTTGAGCTTAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF308180 [CATGGACTGAGGAGTAGAAAAGGATCCAATCCACTTGCATTTCAGCTCAGGAAGCCTCTGCTACTTTGCTTGGCCTGTACAGTAATACAGATAAAGACCTGCAGTTCTTTGGTCTCTTTAGTGAGGACTGAGGAGTTTGGTTGGAGATTGTTGAGGAGATGGGCATCGTCGACGTTGTCTCCGAGTTCTGCTCCGTGCCGAGGACTCGCCGACACCTCAAGAAGAGGAAACAATTCCAGACAGTGGAGATGAAGGTGCGGATATACTGCGAAGGCTGTGAAAAGAAGATCAAGAAGGCCCTTGAGGACATGAAAGGGGTGAGCTCGGTGGA GGTGACGGCGAAGCA GAACAAGGTGACGGTGACGGGGTACGTGGACG CGGGAAGGTGATGCGGCGCGTGGCGTACAAGACCGGGAAGCGGGTGGAGCCATGGCCATACGTG CCGTACGACA CGGGTGGCGCACCCC TACGCACCGGGCGCC ]
[+] EMBL CF311609 [ GGATCCAATCCACTTGCATTTCAGCTCAGGAAGCCTCTGCTACTTTGCTTGGCCTGTACAGTAATACAGATAAAGACCTGCAGTTCTTTGGTCTCTTTAGTGAGGACTGAGGAGTTTGGTTGGAGATTGTTGAGGAGATGGGCATCGTCGACGTTGTCTCCGAGTTCTGCTCCGTGCCGAGGACTCGCCGACACCTCAAGAAGAGGAAACAATTCCAGACAGTGGAGATGAAGGTGCGGATAGACTGCGAAGGCTGTGAAAGGAAGATCAAGAAGGCCCTTGAGGACATGAAAGGGGTGAGCTCGGTGGA GGTGACGGCGAAGCA GAACAAGGTGACGGTGACGGGGTACGTGGACGCCGGGAAGGTGATGCGGCGCGTGGCGTACAAGACCGGGAAGCGGGTGGAGCCATGGCCATACGTG CCGTACGACA C GGTGGCGCACCCC TACGCACCGGGCGCC ]
[+] EMBL CF307948 [ ATCCAATCCACTTGCATTTCAGCTCAGGAAGCCTCTGCTACTTTGCTTGGCCTGTACAGTAATACAGATAAAGACCTGCAGTTCTTTGGTCTCTTTAGTGAGGACTGAGGAGTTTGGTTGGAGATTGTTGAGGAGATGGGCATCGTCGACGTTGTCTCCGAGTTCTGCTCCGTGCCGAGGACTCGCCGACACCTCAAGAAGAGGAAACAATTCCAGACAGTGGAGATGAAGGTGCGGATAGACTGCGAAGGCTGTGAAAGGAAGATCAAGAAGGCCCTTGAGGACATGAAAGGGGTGAGCTCGGTGGA GGTGACGGCGAAGCA GAACAAGGTGACGGTGACGGGGTACGTGGACGCCGGGAAGGTGATGCGGCGTGTGGCGTACAAGACCGGGAAGCGGGTGGAGCCATGGCCATACGTG CCGTACGACA C GGTGGCGCACCCC TACGCACCGGGCGCC ]
[+] EMBL CF317653 [ ATCCAATCCACTTGCATTTCAGCTCAGGAAGCCTCTGCTACTTTGCTTGGCCTGTACAGTAATACAGATAAAGACCTGCAGTTCTTTGGTCTCTTTAGTGAGGACTGAGGAGTTTGGTTGGAGATTGTTGAGGAGATGGGCATCGTCGACGTTGTCTCCGAGTTCTGCTCCGTGCCGAGGACTCGCCGACACCTCAAGAAGAGGAAACAATTCCAGACAGTGGAGATGAAGGTGCGGATAGACTGCGAAGGCTGTGAAAGGAAGATCAAGAAGGCCCTTGAGGACATGAAAGGGGTGAGCTCGGTGGA GGTGACGGCGAAGCA GAACAAGGTGACGGTGACGGGGTACGTGGACGCCGGGAAGGTGATGCGGCGCGTGGCGTACAAGA ]
[+] EMBL CF294819 [ ATCCAATCCACTTGCATTTCAGCTCAGGAAGCCTCTGCTACTTTGCTTGGCCTGTACAGTAATACAGATAAAGACCTGCAGTTCTTTGGTCTCTTTANTGAGGACTGAGGAGTTTGGTTGGAGATTGTTGAGGAGA ]
[+] EMBL AK121488 [ AATCCACTTGCATTTCAGCTCAGGAAGCCTCTGCTACTTTGCTTGGCCTGTACAGTAATACAGATAAAGACCTGCAGTTCTTTGGTCTCTTTAGTGAGGACTGAGGAGTTTGGTTGGAGATTGTTGAGGAGATGGGCATCGTCGACGTTGTCTCCGAGTTCTGCTCCGTGCCGAGGACTCGCCGACACCTCAAGAAGAGGAAACAATTCCAGACAGTGGAGATGAAGGTGCGGATAGACTGCGAAGGCTGTGAAAGGAAGATCAAGAAGGCCCTTGAGGACATGAAAGGGGTGAGCTCGGTGGA GGTGACGGCGAAGCA GAACAAGGTGACGGTGACGGGGTACGTGGACGCCGGGAAGGTGATGCGGCGCGTGGCGTACAAGACCGGGAAGCGGGTGGAGCCATGGCCATACGTG CCGTACGACA C GGTGGCGCACCCC TACGCACCGGGCGCC TACGACAAGAAGGCCCCCG CGGGGTACGTGCGCAACGTGGTGTCCGA CCCCTCCGCCGCACCGCTCGCCCGCGCCTCCTCCACCGAGGT CCGCTACACCGCTGCCTTCAGCGACGAGAACCCCA AC G CCTGCTCCGTCATGTAGCTAGCTGTGTGTCCCCGGGACGACGACGAAGCAGCCTAGCAGGGTGTTTTTGTTGCCCCTTGCAGCTGTAATAATATTCTGTGTGTCCAGATTCGCCATCCCTCAAAAATCTTTCATAGTATTATAGAAGGGAGGAAGTAGTAATTTTTCCAGCTGTAGTAATGTTCTTTGCTTTAGATAGGGTG ]
[+] EMBL CF310947 [ ATCCACTTGCATTTCAGCTCAGGAAGCCTCTGCTACTTTGCTTGGCCTGTACAGTAATACAGATAAAGACCTGCAGTTCTTTGGTCTCTTTAGTGAGGACTGAGGAGTTTGGTTGGAGATTGTTGAGGAGATGGGCATCGTCGACGTTGTCTCCGAGTTCTGCTCCGTGCCGAGGACTCGCCGACACCTCAAGAAGAGGAAACAATTCCAGACAGTGGAGATGAAGGTGCGGATAGACTGCGAAGGCTGTGAAAGGAAGATCAAGAACGCCCTTGAGGACAT ]
[+] EMBL CF305303 [ ATCCACTTGCATTTCAGCTCAGGAAGCCTCTGCTACTTTGCTTGGCCTGCACAGTAATACAGATAAAGACCTGCAGTTCTTTGGTCTCTTTAGTGAGGACTGAGGAGTTTGGTTGGAGATTGTTGAGGAGATGGGCATCGTCGACGTTGTCTCCGAGTTCTGCTCCGTGCCGAGGACTCGCCGACACCTCAAGAAGAGGAAACAATTCCAGACAGTGGAGATGAAGGTGCGGATAGACTGCGAAGGCTGTGAA ]
[+] EMBL CF308361 [ ATCCACCTGCATTTCAGCTCAGGAAGCCTCTGCTACTTTGCTTGGCCTGTACAGTAATACAGATAAAGACCTGCAGTTCTTTGGTCTCTTTAGTGAGGACTGAGGAGTTTGGTTGGAGATTGTTGAGGAGATGGGCATCGTCGACGTTGTCTCCGAGTTCTGCTCCGTGCCGAGGACTCGCCGACACCTCAAGAAGAGGAAACAATTC ]
[+] EMBL CF327712 [ ATCCACTTGCATTTCAGCTCAGGAAGCCTCTGCTACTTTGCTTGGCCTGTACAGTAATACAGATAAAGACCTGCAGTTCTTTGGTCTCTTTAGTGAGGACTGAGGAGTTTGGTTGGAGATTGTTGAGGAGATGGGCATCGTCGACGTTGTCTCCGAGTTCTGCTCCGTGCCGAGGACTCGCCGACACCTCAAGAAGAGGAAACAATTCCAGACAGTGGAGATGAAGGTGCGGATAGACTGCGAAGGCTGTGAAAGGAAGATCAAGAAGGCCCTTGAGGACATGAAAGGGGTGAGCTCGGTGGA GGTGA CGAAGCA GAACAAGGTGACGGTGACGGGGTACGTGGACGCCGGGAAGGTGATGCGGCGCGTGGCGTACAAGACCGGGAAGCGGGTGGAGCCATGGCCATACGTG CCGTACGACA C GGTGGCGCACCCC TACGCACCGGGCGCC TACGACAAGAAGGCCCCCG CGGGGTACG ]
[+] EMBL CF312462 [ ATCCACTTGCATTTCAGCTCAGGAAGCCTCTGCTACTTTGCTTGGCCTGTACAGTAATACAGATAAAGACCTGCAGTTCTTTGGTCTCTTTAGTGAGGACTGAGGAGTTTGGTTGGAGATTGTTGAGGAGATGGGCATCNTCGACGTTGTCTCCGAGTTCTGCTCCGTGCCGAGGACTCGCCGACACCTCAAGAAGAGGAAACAATTCCAGACAGTGGAGATGAAGGTGCGGATAGACTGCGAAGGCTGTGAAAGGAAGATCAAGAAGGCCCTTGAGGACATGAAAGGGGTGAGCTCGGTGGA GGTGACGGCGAGGCA GAACAAGGTGACGGTGACGGGGTACGTGGACGCCGGGAAGGTGATGCGGCGCGTGGCGTACAGGACCGGGAAGCGGGTGGAGCCATGGCCATACGTG CCGTACGACA C GGTGGCGCACCCC TACGCACCGGGCGC ]
[+] EMBL CF307696 [ ATCCACTTGCATTTCAGCTCAGGAAGCCTCTGCTACTTTGCTTGGCCTGTACAGTAATACAGATAAAGACCTGCAGTTCTTTGGTCTCTTTAGTGAGGACTGAGGAGTTTGGTTGGAGATTGTTGAGGAGATGGGCATCGTCGACGTTGTCTCCGAGTTCTGCTCCGTGCCGAGGACTCGCCGACACCTCGAGAAGAGGAAACAATTCCAGACAGTGGAGATGAAGGTGCGGATAGACTGCGAAGGCTGTGAAAGGAAGATCAAGAAGGCCCTTGAGGACATGAAAGGGGTGAGCTCGGTGGA GGTGACGGCGAAGCA GAACAAGGTGACGGTGACGGGGTACGTGGAC CCGGGAAGGTGATGCGGCGCGTGGCGT CAAGACCGGGAAGCGGGTGGAGCCATGGCCATACGTG CCGTACGACA C GGTGGCGCACCCC TACGCACCGGGCGCC ]
[+] EMBL C73796 [ GCTCAGGAAGCCTCTGCTACTTTGCTTGGCCTGTACAGTAATACAGATAAAGACCTGCAGTTCTTTGGTCTCTTTAGTGAGGACTGAGGAGTTTGGTTGGAGATTGTTGAGGAGATGGGCATCGTCGACGTTGTCTCCGAGTTCTGCTCCGTGCCGAGGACTCGCCGACACCTCAAGAAGAGGAAACAATTCCAGACAGTGGAGATGAAGGTGCGGATAGACTGCGAAGGCTGTGAAAGGAAGATCAAGAAGGCCCTTGAGGACATGAAAGGGGTGANCTCGGTGGANGGTGACGGCGAA CAGGAACAAGGTNACGGTTACGGGGTACGTGGACGCCGGGAAAGTGATGCGGCG ]
[+] EMBL CA754130 [ TTGCTTGGCCTGTACAGTAATACAGATAAAGACCTGCAGTTCTTTGGTCTCTTTAGTGAGGACTGAGGAGTTTGGTTGGAGATTGTTGAGGAGATGGGCATCGTCGTCGTTGTCTCCGAGTTCTGCTCCGTGCCGAGGACTCGCCGACACCTCAAGAAGAGGAAACAATTCCAGACAGTGGAGATGAAGGTGCGGATAGACTGCGAAGGCTGTGAAAGGAAGATCAAGAAGGCCCTTGAGGACATGAAAGGGGTGAGCTCGGTGGA GGTGACGGCGAAGCA GAACAAGGTGACGGTGACGGGGTACGTGGACGCCGGGAAGGTGATGCGGCGCGTGGCGTACAAGACCGGGAAGCGGGTGGAGCCATGGCCATACGTG CCGTACGACA C GGTGGCGCACCCC TACGCACCGGGCGCC TACGACAAGAAGGCCCCCG CGGGGTACGTGCGCAACGTGGTGTCCGA CCCCTCCGCCGCACCGCTCGCCCGCGCCTCCTCCACCGAGGT CCGCTACACCGCTGCCTTCAGCGACGAGAACCCCA AC G CCTGCTCCGTCATGTAGCTAGCTGTGTGTCCCCGGGACGACGACGAAGCAGCCTAGCAGGGTGTTTTTGTTGCCCCTTGCAGCTGTAATAATATTCTGTGTGTCCAGATTCGCCATCCCTCAAAAATCTTTCATAGTATTATAGAAGGGAGGAAGTAGTAATTTTTCCAGCTGTAGTAATGTTCTTTGCTTTAGATAGGGTGTTGTGTTACTATTGGACTCTCTTTTGCTTGTGCTTTTGGTTTCTGATGTAAAATACTCCATCATGTTCTTGTTTGGTGAGATGAATCTTCAAATCTGCAAAGTTGCAGATCGGGTTGTTTGAGCTTAAAAAAAAAA ]
[+] EMBL AU069191 [ TGTTGAGGAGATGGGCATCGTCGACGTTGTCTCCGAGTTCTGCTCCGTGCCGAGGACTCGCCGACACCTCAAGAAGAGGAAACAATTCCAGACAGTGGAGATGAAGGTGCGGATAGACTGCGAAGGCTGTGAAAGGAAGATCAAGAAGGCCCTTGAGGACATGAAAGGGGTGAGCTCGGTGGA GGTGACGGCGAAGCA GAACAAGGTGACGGTGACGGGGTACGTGGACGCCGGGAAGGTGATGCGGNGCGTGGCGT CAAGACCGGGAAGCGGGTGGAGCCATGGNCATACGTGCCCGTACGACACC GGTGGCGCACCCC TACGCACCGGGCGCCTTACNACAAGAAAGCCCCCGCCGGGGTACATGC CAA ]
[+] EMBL CF279421 [ GATGGGCATCGTCGACGTTGTCTCCGAGTTCTGCTCCGTGCCGAGGACTCGCCGACACCTCAAGAAGAGGAAACAATTCCAGACAGTGGAGATGAAGGTGCGGATAGACTGCGAAGGCTGTGAAAGGAAGATCAAGAAGGCCCTTGAGGACATGAAAGGGGTGAGCTCGGTGGA GGTGACGGCGAAGCA GAACAAGGTGACGGTGACGGGGTACGTGGACGCCGGGAAGGTGATGCGGCGCGTGGCGTACAAGACCGGGAAGCGGGTGGAGCCATGGCCATACGTG CCGTACGACA C GGTGGCGCACCCC TACGCACCGGGCGCC TACGACAAGAAGGCCCCCG CGGGGTACGTGCGCAACGTGGTGTCCGA CCCCTCCGCCGCACCGCTCGCCCGCGCCTCCTCCACCGAGGT CCGCTACACCGCTGCCTTCAGCGACGAGAACCCCA AC G CCTGCTCCGTCATGTAGCTAGCTGTGTGTCCNCGGGACGACGACGAAGCAGCCTAGCAGGGTGTTTTTGTTGCCCCTTGCAGCTGTAATAATATTCTGTGTGTCCAGATTCGCCATCCCTCAAAAAT ]
[-] EMBL CF294820 [ GTACAAGACCGGGAAGCGGGTGGAGCCATGGCCATACGTG CCGTACGACA C GGTGGCGCACCCC TACGCACCGGGCGCC TACGACAAGAAGGCCCCCG CGGGGTACGTGCGCAACGTGGTGTCCGA CCCCTCCGCCGCACCGCTCGCCCGCGCCTCCTCCACCGAGGT CCGCTACACCGCTGCCTTCAGCGACGAGAACCCCA AC G CCTGCTCCGTCATGTAGCTAGCTGTGTGTCCCCGGGACGACGACGAAGCAGCCTAGCAGGGTGTTTTTGTTGCCCCTTGCAGCTGTAATAATATTCTGTGCGTCCAGATTCGCCATCCCTCAAAAATCTTTCATAGTATTATAGAAGGGAGGAAGTAGTAATTTTTCCAGCTGTAGTAATGTTCTTTGCTTTAGATAGGGTGTTGTGTTACTATTGGACTCTCTTTTGCTTGTGCTTTTGGTTTCTGATGTAAAATACTCCATCATGTTCTTGTTTGGTGAGATGAATCTTAAAATCTGCAAAGTTGCAaaaa ]
[-] EMBL CF308181 [ GTGGCGCACCCCTTACGCACCGGGCGCC TACGACAAGAAGGCCCCCG CGGGGGACGTGCGCAACGTGGTGTCCGACCCCCTCCGCCGCACCGCTCGCCCGCGCCTCCTNCCCCGAGG CCGCTAACCCGCTG CTTCAGCGACGAGAACCCCANAC G CCTGCTCCGTCATGTAGCTAGCTGTGTGTCCCCGGGACGACGACGAAGCAGCCTAGCAGGGTGTTTTTGTTGCCCCTTGCAGCTTTAATAATATTCTGTGTGTCCAGATTCGCCATCCCTCAAAAATCTTTCATAGTATTATAGAAGGGAGGAAGTAGTAATTTTTCCAGCTGTAGTAATGTTCTTTGCTTTAGATAGGGTGTTGTGTTACTATTGGACTCTCTTTTGCTTGTGCTTTTGGTTTCTGATGTAAAATACTCCATCATTTTCTTGTTTGGTGAGATGAATCTTCAAATCTGCAAAGTTGCAGATC GGTTGTTTGAGCTTAAAAAAAA ]
[-] EMBL CF307949 [ GCC TACGACAAGAAGGCCCCCG CGGGGTACGTGCGCAACGTGGTGTCCGA CCCCTCCGCCGCACCGTTCGCCCGCGCCTCCTCCACCGAGGT CCGCTACACCGCTG CTTCAGCGACGAGAACCCCA AC GCCCTGCTCCGTCATGTAGCTAGCTGTGTGTCCCCGGGACGACGACGAAGCAGCCTAGCAGGGTGTTTTTGTTGCCCCTTGCAGCTGTAATAATATTCTGTGTGTCCAGATTCGCCATCCCTCAAAAATCTTTCATAGTATTATAGAAGGGAGGAAGTAGTAATTTTTCCAGCTGTAGTAATGTTCTTTGCTTTAGATAGGGTGTTGTGTTACTATTGGACTCTCTTTTGCTTGTGCTTTTGGTTTCTGATGTAAAATACTCCATCATGTCCTTGTTTGGTGAGATGAATCTTCAAATCTGCAAAGTTGCAGATC GGTTGTTTGAGCTTAAAAAAAA ]
[+] EMBL CF314595 [ GGGTACGTGCGCAACGTGGTGTCCGA CCCCTCCGCCGCACCGCTCGCCCGCGCCTCCTCCACCGAGGT CCGCTACACCGCTACCTTCAGCGACGAGAACCCCA AC G CCTGCTCCGTCATGTAGCTAGCTGTGTGTCCCCGGGACGACGACGAAGCAGCCTAGCAGGGTGTTTTTGTTGCCCCTTGCAGCTGTAATAATATTCTGTGTGTCCAGATTCGCCATCCCTCAAAAATCTTTCATAGTATTATAGAAGGGAGGAAGTAGTAATTTTTCCAGCTGTAGTAATGTTCTTTGCTTTAGATAGGGTATTGTGTTACTATTGGACTCTC TTTGCTTGTGCTTTTGGTTTCTGATGTAAAATACTCCATCATGTTCTTGTTTGGTGAGATGAATCTTCAAATCTGCAAAaaa ]
[-] EMBL CF314596 [ GGGTACGTGCGCAACGTGGTGTCCGA CCCCTCCGCCGCACCGCTCGCCCGCGCCTCCTCCACCGAGGT CCGCTACACCGCTACCTTCAGCGACGAGAACCCCA AC G CCTGCTCCGTCATGTAGCTAGCTGTGTGTCCCCGGGACGACGACGAAGCAGCCTAGCAGGGTGTTTTTGTTGCCCCTTGCAGCTGTAATAATATTCTGTGTGTCCAGATTCGCCATCCCTCAAAAATCTTTCATAGTATTATAGAAGGGAGGAAGTAGTAATTTTTCCAGCTGTAGTAATGTTCTTTGCTTTAGATAGGGTATTGTGTTACTATTGGACTCTC TTTGCTTGTGCTTTTGGTTTCTGATGTAAAATACTCCATCATGTTCTTGTTTGGTGAGATGAATCTTCAAATCTGCAAAaaaa ]
[+] EMBL AU082984 [ CTCCTCCACCGAGGT CCGCTACACCGCTGCCTTCAGCGACGAGAACCCCA ACGG CCTGCTCCGTCATGTAGCTAGCTGTGTGTCCCCGGGACGACGACGAAGCAGCCTAGCAGGGTGTTTTTGTTGCCCCTTGCAGCTGTAATAATATTCTGTGTGTCCANATTCGCCATCCCTCAAAAATCTTTCATAGTATTATAGAAGGGAGGAAGTAGTAATTTTTCCAGCTGTAGTAATGTTCTTTGCTTTAGATAGGGTGTTGTGTTACTATTGGACTCTCTTTTGCTTGTGCTTTTGGTTTCTGATGTAAAATACTCCATCATGTTCTTGTTTGGTGANATGAATCTTCAAATCTGCAAAGTTGCAGATC GGTTGTTTGAGCTTAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CF312463 [ CTCCACCGAGGTCCCGCTACACCGCTGCCTTCAGCGACGAGAACCCCA AC G CCTGCTCCGTCATGTAGCTAGCTGTGTGTCCCCGGGACGACGACGAAGCAGCCTAGCAGGGTGTTTTTGTTGCCCCTTGCAGCTGTAATAATATTCTGTGTGTCCAGATTCGCCATCCCTCAAAAATCTTTCATAGTATTATAGAAGGGAGGAAGTAGTAATTTTTCCAGCTGTAGTAATGTTTTTTGCTTTAGATAGGGCGTTGTGTTACTATTGGACTCTCTTTTGCTTGTGCTTTTGGTTTCTGATGTAAAATACTCCATCATGTTCTTGTTTaaaaaaaaa ]
[-] EMBL CF337111 [ AGCGACGAGAACCCCA AC G CCTGCTCCGTCATGTAGCTAGCTGTGTGTCCCCGGGACGACGACGAAGCAGCCTAGCAGGGTGTTTTTGTTGCCCCTTGCAGCTGTAATAATATTCTGTGTGTCCAGATTCGCCATCCCTCAAAAATCTTTCATAGTATTATAGAAGGGAGGAAGTAGTAATTTTTCCAGCTGTAGTAATGTTCTTTGCTTTAGATAGGGTGTTGTGTTACTATTGGACTCTCTTTTGCTTGTGCTTTTGGTTTCTGATGTAAAATACTCCATCATGTTCTTGTTTGGTGAGATGAATCTTCAAATCaaaaaa ]
consensusID : consensus_16361#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 564 fasta sequence
[GTACAAGACCGGGAAGCGGGTGAAGCCATGGCCATACGTGCCGTACGACACGGTGGCGCACCCCTACGCACCGGGCGCCTACGACAAGAAGGCCCCCGCGGGGTACGTGCGCAACGTGGTGTCCGACCCTTCCGCCGCACCGTTCGCCCGCGCCTCCTCCACCGAGGTCCGTTACACCGCTGCCTTCAGCGACGAGAACCCCAACGCCTGCTCCGTCATGTAGCTAGCTGTGTGTCCCCGGGACGACGACGAAGCAGCCTAGCAGGGTGTTTTTGTTGCCCCTTGCAGCTGTAATAATATTCTGTGTGTCCAGATTCGCCATCCCTCAAAAATCTAAAAAAGTATTATAGAAGGGAGGAAGTAGTAATTTTTCCAGCTGAAAAAATGTTCTTTGCTTTAGATAGGGTGTTGTGTTACTATTGGACTCTCTTTTGCTTGTGCTTTTGGTTTCTGATGTAAAATACTCCATCATGTTCTTGTTTGGTGAGATGAATCTTCAAATCTGCAAAGTTGCAAAAATTAAAAAAAAAAAAAAAACACAGTCATGCCGTTACGTAGCGTATC]
[-] EMBL CF279422 [GTACAAGACCGGGAAGCGGGTGAAGCCATGGCCATACGTGCCGTACGACACGGTGGCGCACCCCTACGCACCGGGCGCCTACGACAAGAAGGCCCCCGCGGGGTACGTGCGCAACGTGGTGTCCGACCCTTCCGCCGCACCGTTCGCCCGCGCCTCCTCCACCGAGGTCCGTTACACCGCTGCCTTCAGCGACGAGAACCCCAACGCCTGCTCCGTCATGTAGCTAGCTGTGTGTCCCCGGGACGACGACGAAGCAGCCTAGCAGGGTGTTTTTGTTGCCCCTTGCAGCTGTAATAATATTCTGTGTGTCCAGATTCGCCATCCCTCAAAAATCTAAAAAAGTATTATAGAAGGGAGGAAGTAGTAATTTTTCCAGCTGAAAAAATGTTCTTTGCTTTAGATAGGGTGTTGTGTTACTATTGGACTCTCTTTTGCTTGTGCTTTTGGTTTCTGATGTAAAATACTCCATCATGTTCTTGTTTGGTGAGATGAATCTTCAAATCTGCAAAGTTGCAAAAATTAAAAAAAAAAAAAAAACACAGTCATGCCGTTACGTAGCGTATC]
consensusID : consensus_16361#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 443 fasta sequence
[GNGNANCGCGTGGGTTGCATTTCAGCTCAGGAAGCCTCTGCTACTTTGCTTGGCCTGTACAGTAATACAGATAAAGACCTGCAGTTCTTTGGTCTCTTTAGTGAGGACTGAGGAGTTTGGTTGGAGATTGTTGAGGAGATGGGCATCGTCGACGTTGTCTCCGAGTTCTGCTCCGTGCCGAGGACTCGCCGACACCTCAAGAAGAGGAAACAATTCCAGACAGTGGAGATGAAGGTGCGGATAGACTGCGAAGGC-TGTGAAAGGAAGATCAAGAAGGCCCTTGAGGACATGAAAGGGGTGAGCTCGGTGGAGGTGACGGCG-ANAGGAACAAAGGTGACGGTGACGGGGTACGTGGACGCCGNGAAGGTGATGCGGCGCGTTGCGTACAAAGACCGGGAAAGCGGGTTGAGCCATTGCATACGTGCCTACGACANGGTTGCGAC]
[+] EMBL AU064275 [GNGNANCGCGTGGGTTGCATTTCAGCTCAGGAAGCCTCTGCTACTTTGCTTGGCCTGTACAGTAATACAGATAAAGACCTGCAGTTCTTTGGTCTCTTTAGTGAGGACTGAGGAGTTTGGTTGGAGATTGTTGAGGAGATGGGCATCGTCGACGTTGTCTCCGAGTTCTGCTCCGTGCCGAGGACTCGCCGACACCTCAAGAAGAGGAAACAATTCCAGACAGTGGAGATGAAGGTGCGGATAGACTGCGAAGGC TGTGAAAGGAAGATCAAGAAGGCCCTTGAGGACATGAAAGGGGTGAGCTCGGTGGAGGTGACGGCG ANAGGAACAAAGGTGACGGTGACGGGGTACGTGGACGCCGNGAAGGTGATGCGGCGCGTTGCGTACAAAGACCGGGAAAGCGGGTTGAGCCATTGCATACGTGCCTACGACANGGTTGCGAC]
[+] EMBL CK085254 [ TTTCAGCTCAGGAAGCCTCTGCTACTTTGCTTGGCCTGTACAGTAATACAGATAAAGACCTGCAGTTCTTTGGTCTCTTTAGTGAGGACTGAGGAGTTTGGTCGGAGATTGTGGAGGAGATGGGCATCGTCGACGTTGTCTCCGAGTTCTGCTCCGTGCCGAGGACTCGCCGACACCTCAAGAAGAGGAAACAATTCCAGACAGTGGAGATGAAGGTGCGGATAGACTGCGAAGGC TGTGAAAGGAAGATCAAGAAGGCCCTTGAGGACATGAAAGGGGTGAGCTCGGTGGAGGTG ]
[+] EMBL AU064295 [ CAGCTCAGGAAGCCTCTGCTACTTTGCTTGNCCTGTACAGTAATACAGATAAAGACCTGCAGTTCTTTGGTCTCTTTAGTGAGGACTGAGGAGTTTGGTTGGAGATTGTTGAGGAGATGGGCATCGTCGACGTTGTCTCCGAGTTCTGCTCCGTGCCGAGGACTCGCCGACACCTCAAGAAGAGGAAACAATTCCAGACAGTGGAGATGAAGGTGCGGATAGACTGCGAAGGCTTGTGAAAGGAAGATCAAGAAGGCCCTTGAGGACATGAAAGGGGTGAGCTCGGTGGAGGTNACGGCGAAGAGGAACAAAGGTGACGGTTACGGGGTAC ]
consensusID : consensus_16361#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 422 fasta sequence
[AAGTGGTGTCCGACCCCTCCGCCGCACCGGTTGCCCGGGCCTCCTCCACCGAGGTCCGGTACACCGCTGCCTTCAGCGACGAGAACCCCAACGCCTGCTCCGTCGTGTAGCTAGCTGTGTGTCCCCGGGACGACGACGAAGCAGCCTAGCAGGGTGTTTTTGTTGCCCCTTGCAGCTGTAATAATATTCTGTGTGTCCAGATTCGCCATCCCTCAAAAATCTTTTGTCCAGATTCGCCATCCCTCAAAAATCTTTCATAGTATTATAGAAGGGAGGAAGTAGTAATTTTTCCAGCTGTAGTAATGTTCTTTGCTTTAGATAGGGTGTTGTGTTACTATTGGACTCTCTTTTGCTTGTGCTTTTGGTTTCAGATGTAAAATACTTCATCATGTTCTTGTTTGGGGAAAAAAAAAAAAAAAAAA]
[-] EMBL CF327713 [AAGTGGTGTCCGACCCCTCCGCCGCACCGGTTGCCCGGGCCTCCTCCACCGAGGTCCGGTACACCGCTGCCTTCAGCGACGAGAACCCCAACGCCTGCTCCGTCGTGTAGCTAGCTGTGTGTCCCCGGGACGACGACGAAGCAGCCTAGCAGGGTGTTTTTGTTGCCCCTTGCAGCTGTAATAATATTCTGTGTGTCCAGATTCGCCATCCCTCAAAAATCTTTTGTCCAGATTCGCCATCCCTCAAAAATCTTTCATAGTATTATAGAAGGGAGGAAGTAGTAATTTTTCCAGCTGTAGTAATGTTCTTTGCTTTAGATAGGGTGTTGTGTTACTATTGGACTCTCTTTTGCTTGTGCTTTTGGTTTCAGATGTAAAATACTTCATCATGTTCTTGTTTGGGGAAAAAAAAAAAAAAAAAA]
consensusID : consensus_16361#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 315 fasta sequence
[GCGCCTACGACAAGAAGGCCCCCGCGGGGTACGTGCGCAACGTGGTGTCCGACCCCTCCGCCGCACCGCTCGCCCGCGCCTCCTCCACCGAGGTCCGCTACACCGCTGCCTTCAGCGACGAGAACCCCAACGCCTGCTCCGTCATGTAGCTAGCTGTGTGTCCCCGGGACGACGACGAAGCAGCCTAGCAGGGTGTTTTTGTTGCCCCTTGCAGCTGTAATAATATTCTGTGTGTCCAGATTCGCCATCCCTCAAAAATCTTTCGTCCAGATTCGCCATCCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU094685 [GCGCCTACGACAAGAAGGCCCCCGCGGGGTACGTGCGCAACGTGGTGTCCGACCCCTCCGCCGCACCGCTCGCCCGCGCCTCCTCCACCGAGGTCCGCTACACCGCTGCCTTCAGCGACGAGAACCCCAACGCCTGCTCCGTCATGTAGCTAGCTGTGTGTCCCCGGGACGACGACGAAGCAGCCTAGCAGGGTGTTTTTGTTGCCCCTTGCAGCTGTAATAATATTCTGTGTGTCCAGATTCGCCATCCCTCAAAAATCTTTCGTCCAGATTCGCCATCCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU094673 [ AAGGCCCCCGCGGGGTACGTGCGCAACGTGGTGTCCGACCCCTCCGCCGCACCGCTCGCCCGCGCCTCCTCCACCGAGGTCCGCTACACCGCTGCCTTCAGCGACGAGAACCCCAACGCCTGCTCCGTCATGTAGCTAGCTGTGTGTCCCCGGGACGACGACGAAGCAGCCTAGCAGGGTGTTTTTGTTGCCCCTTGCAGCTGTAATAATATTCTGTGTGTCCAGATTCGCCATCCCTCAAAAATCTTTCGTCCAGATTCGCCATCCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_16361#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 162 fasta sequence
[CCGCTAGGAAGTAGTAATTTTTCCAGCTGTAGTAATGTTCTTTGCTTTAGATAGGGTGTTGTGTTACTATTGGACTCTCTTTTGCTTGTGCTTTTGGTTTCTGATGTAAAATACTCCATCATGTTCTTGTTTAGCGGCCGCGAATTCGCGGCCGCTAGCGGC]
[-] EMBL AU225419 [CCGCTAGGAAGTAGTAATTTTTCCAGCTGTAGTAATGTTCTTTGCTTTAGATAGGGTGTTGTGTTACTATTGGACTCTCTTTTGCTTGTGCTTTTGGTTTCTGATGTAAAATACTCCATCATGTTCTTGTTTAGCGGCCGCGAATTCGCGGCCGCTAGCGGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_16361#3 ------------------------------------------------------------
consensus_16361#5 ------------------------------------------------------------
consensus_16361#1 ------------------------------------------------------------
consensus_16361#4 ------------------------------------------------------------
consensus_16361#0 CATGGACTGAGGAGTAGAAAAGGATCCAATCCACTTGCATTTCAGCTCAGGAAGCCTCTG 60
consensus_16361#2 ------------------------------------------------------------
consensus_16361#3 ------------------------------------------------------------
consensus_16361#5 ------------------------------------------------------------
consensus_16361#1 ------------------------------------------------------------
consensus_16361#4 ------------------------------------------------------------
consensus_16361#0 CTACTTTGCTTGGCCTGTACAGTAATACAGATAAAGACCTGCAGTTCTTTGGTCTCTTTA 120
consensus_16361#2 ------------------------------------------------------------
consensus_16361#3 ------------------------------------------------------------
consensus_16361#5 ------------------------------------------------------------
consensus_16361#1 ------------------------------------------------------------
consensus_16361#4 ------------------------------------------------------------
consensus_16361#0 GTGAGGACTGAGGAGTTTGGTTGGAGATTGTTGAGGAGATGGGCATCGTCGACGTTGTCT 180
consensus_16361#2 ------------------------------------------------------------
consensus_16361#3 ------------------------------------------------------------
consensus_16361#5 ------------------------------------------------------------
consensus_16361#1 ------------------------------------------------------------
consensus_16361#4 ------------------------------------------------------------
consensus_16361#0 CCGAGTTCTGCTCCGTGCCGAGGACTCGCCGACACCTCAAGAAGAGGAAACAATTCCAGA 240
consensus_16361#2 ------------------------------------------------------------
consensus_16361#3 ------------------------------------------------------------
consensus_16361#5 ------------------------------------------------------------
consensus_16361#1 ------------------------------------------------------------
consensus_16361#4 ------------------------------------------------------------
consensus_16361#0 CAGTGGAGATGAAGGTGCGGATAGACTGCGAAGGCTGTGAAAGGAAGATCAAGAAGGCCC 300
consensus_16361#2 ------------------------------------------------------------
consensus_16361#3 ------------------------------------------------------------
consensus_16361#5 ------------------------------------------------------------
consensus_16361#1 ------------------------------------------------------------
consensus_16361#4 ------------------------------------------------------------
consensus_16361#0 TTGAGGACATGAAAGGGGTGAGCTCGGTGGAGGTGACGGCGAAGCAGAACAAGGTGACGG 360
consensus_16361#2 ------------------------------------------------------------
consensus_16361#3 ------------------------------------------------------------
consensus_16361#5 ------------------------------------------------------------
consensus_16361#1 -------------------------------------------GTACAAGACCGGGAAGC 17
consensus_16361#4 ------------------------------------------------------------
consensus_16361#0 TGACGGGGTACGTGGACGCCGGGAAGGTGATGCGGCGCGTGGCGTACAAGACCGGGAAGC 420
consensus_16361#2 ------------------------------------------------------------
consensus_16361#3 ------------------------------------------------------------
consensus_16361#5 ------------------------------------------------------------
consensus_16361#1 GGGTGAAGCCATGGCCATACGTGCCGTACGACACGGTGGCGCACCCCTACGCACCGGGCG 77
consensus_16361#4 ---------------------------------------------------------GCG 3
consensus_16361#0 GGGTGGAGCCATGGCCATACGTGCCGTACGACACGGTGGCGCACCCCTACGCACCGGGCG 480
consensus_16361#2 ------------------------------------------------------------
consensus_16361#3 ------------------------------------AAGTGGTGTCCGACCCCTCCGCCG 24
consensus_16361#5 ------------------------------------------------------------
consensus_16361#1 CCTACGACAAGAAGGCCCCCGCGGGGTACGTGCGCAACGTGGTGTCCGACCCTTCCGCCG 137
consensus_16361#4 CCTACGACAAGAAGGCCCCCGCGGGGTACGTGCGCAACGTGGTGTCCGACCCCTCCGCCG 63
consensus_16361#0 CCTACGACAAGAAGGCCCCCGCGGGGTACGTGCGCAACGTGGTGTCCGACCCCTCCGCCG 540
consensus_16361#2 -----------------GNGNANCGCGTGGGTTGCATTTCAGCTCAGGAAGCCTCTGCTA 43
consensus_16361#3 CACCGGTTGCCCGGGCCTCCTCCACCGA---GGTCCGGTACACCGCTGCCTTCAGCGACG 81
consensus_16361#5 ------------------------------------------------------------
consensus_16361#1 CACCGTTCGCCCGCGCCTCCTCCACCGA---GGTCCGTTACACCGCTGCCTTCAGCGACG 194
consensus_16361#4 CACCGCTCGCCCGCGCCTCCTCCACCGA---GGTCCGCTACACCGCTGCCTTCAGCGACG 120
consensus_16361#0 CACCGCTCGCCCGCGCCTCCTCCACCGA---GGTCCGCTACACCGCTGCCTTCAGCGACG 597
consensus_16361#2 CTTTGCTTGGCCTGTACAGTAATACAGATAAAGACCTGCAGTTCTTTGGTCTCTTTAGTG 103
consensus_16361#3 AGAACCCCAACGCCTGCTCCGTCGTG--TAGCTAGCTGTGTGTCCCCGGGACGACGACGA 139
consensus_16361#5 ------------------------------------------------------------
consensus_16361#1 AGAACCCCAACGCCTGCTCCGTCATG--TAGCTAGCTGTGTGTCCCCGGGACGACGACGA 252
consensus_16361#4 AGAACCCCAACGCCTGCTCCGTCATG--TAGCTAGCTGTGTGTCCCCGGGACGACGACGA 178
consensus_16361#0 AGAACCCCAACGCCTGCTCCGTCATG--TAGCTAGCTGTGTGTCCCCGGGACGACGACGA 655
consensus_16361#2 AGGACTGAGGAGTTTGGTTGGAGATTGTTGAGGAGATGGGCATCGTCGACGTTGTCTCCG 163
consensus_16361#3 AG--CAGCCTAGCAGGGTGTTTTTGTTGCCCCTTGCAGCTGTAATAATATTCTGTGTGTC 197
consensus_16361#5 ------------------------------------------------------------
consensus_16361#1 AG--CAGCCTAGCAGGGTGTTTTTGTTGCCCCTTGCAGCTGTAATAATATTCTGTGTGTC 310
consensus_16361#4 AG--CAGCCTAGCAGGGTGTTTTTGTTGCCCCTTGCAGCTGTAATAATATTCTGTGTGTC 236
consensus_16361#0 AG--CAGCCTAGCAGGGTGTTTTTGTTGCCCCTTGCAGCTGTAATAATATTCTGTGTGTC 713
consensus_16361#2 AGTTCTGCTCCGTGCCGAGGACTCGCCGACACCTCAAGAAGAGGAAACAATTCCAGACAG 223
consensus_16361#3 CAGATTCGCCATCCCTCAAAAATCTTTTGTCCAGATTCGCCATCCCTCAAAAATCTTTCA 257
consensus_16361#5 ------------------------------------------------------------
consensus_16361#1 CAGATTCGCCATCCCTCAAAAATCTAAA-------------------------------A 339
consensus_16361#4 CAGATTCGCCATCCCTCAAAAATCTTTCGTCCAGATTCGCCATCCCTCAA---------A 287
consensus_16361#0 CAGATTCGCCATCCCTCAAAAATCTTTC-------------------------------A 742
consensus_16361#2 TGGAGATGAAGGTGCGGATAGACTGCGAAGGCTGTGAAAGGAAGATCAA----------G 273
consensus_16361#3 TAGTATTATAGAAGGGAGGAAGTAGTAATTTTTCCAGCTGTAGTAATGTTCTTTGCTTTA 317
consensus_16361#5 -----------CCGCTAGGAAGTAGTAATTTTTCCAGCTGTAGTAATGTTCTTTGCTTTA 49
consensus_16361#1 AAGTATTATAGAAGGGAGGAAGTAGTAATTTTTCCAGCTGAAAAAATGTTCTTTGCTTTA 399
consensus_16361#4 AAAAAAAAAAAAAAAAAAAAAAAAAAAA-------------------------------- 315
consensus_16361#0 TAGTATTATAGAAGGGAGGAAGTAGTAATTTTTCCAGCTGTAGTAATGTTCTTTGCTTTA 802
consensus_16361#2 AAGGCCCTTGAGGACATGAAAGGGGTGAGCTCGGTGGAGGTGACGGCGANAGGAACAAAG 333
** *
consensus_16361#3 GATAGGGTGTTGTGTTACTATTGGACTCTCTTTTGCTTGTGCTTTTGGTTTCAGATGTAA 377
consensus_16361#5 GATAGGGTGTTGTGTTACTATTGGACTCTCTTTTGCTTGTGCTTTTGGTTTCTGATGTAA 109
consensus_16361#1 GATAGGGTGTTGTGTTACTATTGGACTCTCTTTTGCTTGTGCTTTTGGTTTCTGATGTAA 459
consensus_16361#4 ------------------------------------------------------------
consensus_16361#0 GATAGGGTGTTGTGTTACTATTGGACTCTCTTTTGCTTGTGCTTTTGGTTTCTGATGTAA 862
consensus_16361#2 GTGACGGTGACGGGGTAC--GTGGACGCCGNGAAGGTGATGCGGCGCGTTGCGTACAAAG 391
consensus_16361#3 AATACTTCATCATGTTCTTGTTTGGGGAAAAAAAAAAAAAAAAAA--------------- 422
consensus_16361#5 AATACTCCATCATGTTCTTGTTTAGCGGCCGCGAATTCGCGGCCGCTAGCGGC------- 162
consensus_16361#1 AATACTCCATCATGTTCTTGTTTGGTGAGATGAATCTTCAAATCTGCAAAGTTGCAAAAA 519
consensus_16361#4 ------------------------------------------------------------
consensus_16361#0 AATACTCCATCATGTTCTTGTTTGGTGAGATGAATCTTCAAATCTGCAAAGTTGCAGATC 922
consensus_16361#2 ACCGGGAAAGCGGGTTGAGCCATTGCATACGTGCCTACGACANGGTTGCGAC-------- 443
consensus_16361#3 ---------------------------------------------
consensus_16361#5 ---------------------------------------------
consensus_16361#1 TTAAAAAAAAAAAAAAAACACAGTCATGCCGTTACGTAGCGTATC 564
consensus_16361#4 ---------------------------------------------
consensus_16361#0 GGTTGTTTGAGCTTAAAAAAAAAAAAAAAAAAAAAAAAAA----- 962
consensus_16361#2 ---------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||