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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16498#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 31 consensus length = 627 fasta sequence
[GCTACGTAACGGCATAACAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTATATCAATAGGTGAGATTCATTATATCACTGAATAACGACTACATCACAGAATGTCACAGGACGGAAGGCTAGAATTACAATCAGAAGTTCATTTATCCGAATGTGCATCTGATAACCCTCACACATACATACACACACCTCAAAGTTTTAAGAGATGCCCAATCTAGCA-CCGCAGTAGAGTCTGGGCATCTCTAAAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAA-CCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCACGCAGCAAAACCATTTCTTCGAGTTTGTCTTGGGGGCATATGATTCCACCC-TC-TCAG-TCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATT-CCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACG-CTGG-GTCGTTGACAT-CCCATTCACCAAACTTGGGCAAGGGACGACCTGCTTCCTCCGACATGGATTGCGGCGAGCCCGATCCGGCGACAAATCCGGGAAGTTCCTCTCCNCNCCNCCACAATGGCGGC]
[+] EMBL CF321539 [GCTACGTAACGGCATAACAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTATATCAATAGGTGAGATTCATTATATCACTGAATAACGACTACATCACAGAATGTCACAGGACGGAAGGCTAGAATTACAATCAGAAGTTCATTTATCCGAATGTGCATCTGATAACCCTCACACATACATACACACACCTCAAAGTTTTAAGAGATGCCCAATCTAGCA CCGCAGTAGAGTCTGGGCATCTCTAAAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAA CCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCACGCAGCAAAACCATTTCTTCGAGTTTGTCTTGGGGGCATATGATTCCACCC TC TCAG TCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATT CCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACG CTGG GTCGTTGACAT CCCATTCACCAAACTTGGGCAAGGGACGACCTGCTTCCTCCGACATGGATTGCGGCGAGCCCGATCCGGCGA ]
[+] EMBL CF278733 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTATATCAATAGGGGAAATTCATTATTTCCCTGAATAACGACTACCTCACAAAATGTCACAGGACGGAAGGCTAAAATTACAATCAAAAGTTCATTTATCCGAATGTGCATTTGATAACCCTCACACATACATACACACACCTAAAAGTTTTAAAAAATGCCCAATCTACCA CCGCAGTAAAGTCTGGGCATCTTTAAAAGGTCTTATGGATAGTTTGTTTATACCAAAATTAAAGGATAGTAATTTTGCAA CCCATGGAACTCGTTTTCATCAAAATTGTGTAGGACTGGATGTCACCCACCAAAACCATTTCTTCAAGTTTGTC ]
[-] EMBL AU077474 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTATATCAATAGGTGAGATTCATTATATCACTGAATAACGACTACATCACAGAATGTCACAGGACGGAAGGCTAGAATTACAATCAGAAGTTCATTTATCCGAATGTGCATCTGATAACCCTCACACATACATACACACACCTCAAAGTTTTAAGAGATGCCCAATCTAGCA CCGCAGTAGAGTCTGGGCATCTCTAAAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAA CCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCACGCAGCAAAACCATTTCTTCGAGTTTGTCTTGGGGGCATATGATTCCACCC TC TCAG TCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATT CCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGNGAATCCATCAGCGGACG CTGG GTCGTTGACAT CCCATTCACCAAACTTGGGCAAGGGACGACCTGCTTCCTCCGACATGGATTGCGGCGAG ]
[-] EMBL AU057482 [ TTTTTTTTTTTTTTTTTTTTTTTTCAATAGGTGAGATTCATTATATCACTGAATAACGACTACATCACAGAATGTCACAGGACGGAAGGCTAGAATTACAATCAGAAATTCATTTATCCGAATGTGCATCTGATAACCCTCACACATACATACACACACCTCAAAGTTTTAAGAGATGCCCAATCTAGCA CCGCAGTAGAGTCTGGGCATCTCTAAAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAA CCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCACGCAGCAAAAC ]
[+] EMBL AA752107 [ TTTTTTTTTTTTTTTTATATAAATAGGTGAGATTCATTATATCACTGAATAACGACTACATCACAGAATGTCACAGGACGGAAGGCTAGAATTACAATCAGAAGTTCATTTATCCGAATGTGCATCTGATAACCCTCACACATACATACACACACCTCAAAGTTTTAAGAGATGCCCAATCTAGCA CCGCAGTAGAGTCTGGGCATCTCTACAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAA CCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCACGCAGCAAAACCATTTCTTCGAGTTTGTCTTGGGGGCATATGATTCCACCC TC TCAG TCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCA T CCCACC TTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAA CCATCAACNGAC CTGG GTCNTTGAAAT CCA TCACC AACTTNGGCAA GGAANAACTGCTT CTCCGANATGGATTG GGGGAACCC ATCNGNAACCAAATCCGGGAAGTTCCTCTCCNCNCCNCCACAATGGCGGC]
[-] EMBL AU174878 [ TTTTTTTTATATCAATAGGTGAGATTCATTATATCACTGAATAACGACTACATCACAGAATGTCACAGGACGGAAGGCTAGAATTACAATCAGAAGTTCATTTATCCGAATGTGCATCTGATAACCCTCACACATACATACACACACCTCAAAGTTTTAAGAGATGCCCAATCTAGCA CCGCAGTAGAGTCTGGGCATCTCTAAAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAA CCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCACGCAGCAAAACCATTTCTTCGAGTTTGTCTTGGGGGCATATGATTCCACCC TC TCAG TCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATT CCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCGG ]
[+] EMBL CF314024 [ TTTTTTATATCAATAGGTGAGATTCATTATATCACTGAATAACGACTACATCACAGAATGTCACAGGACGGAAGGCTAGAATTACAATCAGAAGTTCATTTATCCGAATGTGCATCTGATAACCCTCACACATACATACACACACCTCAAAGTTTTAAGAGATGCCCAATCTAGCA CCGCAGTAGAGTCTGGGCATCTCTAAAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAA CCCATGGAACTCGTTTTCATCAAGATTGTGTAGGAATGGATGTCACGCAGCAAAACCATTTCTTCGAGTTTGTCTTGGGGGCATATGATTCCACCC TC TCAG TCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATT CCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACGCCTGG GTCGTTGACAT CCCATTCACCAAACTTGGGCAAGGGACGACCTGCTTCCTCCGACATGGATTGCGGCGAGCCCGA ]
[-] EMBL BI795072 [ TTTTTTATATAAATAGGTGAGATTCATTATATCACTGAATAACGACTACATCACAGAATGTCACAGGACGGAAGGCTAGAATTACAATCAGAAGTTCATTTATCCGAATGTGCATCTGATAACCCTCACACATACATACACACACCTCAAAGTTTTAAGAGATGCCCAATCTAGCA CCGCAGTAGAGTCTGGGCATCTCTACAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAA TTTGCAA CCCATGGAACTCGTTTTCATCAAGA TGTGTAGGACTGGATGTCACGCAGCAAAACCATTTCTTCGAG TTGTCTTGGGGGCATATGATTCCACCC TC TCAG TCCTAGTTTC TTGCAGGGTGAATCAGTATCTTGCCCATT CCCACCCTTTTTCTCATCTCTGGC TTGTTGAATATCACTGTGAATCCATCAGCGGACG CTGG GTCGTTGACAT CCCATTCACCAAACTTGGGCAAGGGACGACCTGCTTCCTCCGACATGG ]
[+] EMBL CF335647 [ TTTTTATATCAATAGGTGAGATTCATTATATCACTGAATAACGACTACATCACAGAATGTCACAGGACGGAAGGCTAGAATTACAATCAGAAGTTCATTTATCCGAATGTGCATCTGATAACCCTCACACATACATACACACACCTCAAAGTTTTAAGAGATGCCCAATCTAACA CCGCAGTAGAGTCTGGGCATCTCTAAAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGGTAGTAATTTTGCAA CCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCGCGCAGCAAAACCATTTCTTCGAGTTTGTCTTGGGGGCATATGATTCCACCC TC TCAG TCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATT CCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACG CTGG GTCGTTGACAT CCCATTCACCAAAC ]
[+] EMBL CF317689 [ TTTTATAT AATAGGTGAGATTCATTATATCACTGAATAACGACTACATCACAGAATGTCACAGGACGGAAGGCTAGAATTACAATCAGAAGTTCATTTATCTGAATGTGCATCTGATAACCCTCACACATACATACACACACCTCAAAGTTTTAAGAGATGCCCAATCTAGCA CCGCAGTAGAGTCTGGGCATCTCTAAAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAA CCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCACGCAGCAAAACCATTTCTTCGAGTTTGTCTTGGGGGCATATGATTCCACCC TC TCAG TCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATT CCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACG CTGGNGTCGTTGACAT CCCATTCACCAAACTTGGGCAAGGGACGACCTGCTTCCTCCGACATGGATTGCGGCGAGCCCGAT ]
[-] EMBL AA754355 [ TATATCAATAGGTGAGARTCATTATATCACTGAATAACGACTACATCACAGAATGTCACAGGACGGAAGGCTAGAATTACAATCAGAAGTTCATTTATCCGAATGTGCATCTGATAACCCTCACACATACATACACACACCTCAAAGTTTTAAGAGATGCCCAATCTAGCA CCGCAGTAGAGTCTGGGCATCTCTAAAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAA CCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCACGCAGCAAAACCATTTCTTCGAGTTTGTCTTGGGGGCATATGATTCCACCC TCTTCAGAMCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATTCCCCACCtcg ]
[-] EMBL AK059360 [ GTGAGATTCATTATATCACTGAATAACGACTACATCACAGAATGTCACAGGACGGAGGGCTAGAATTACAATCAGAAGTTCATTTATCCGAATGTGCATCTGATAACCCTCACACATACATACACACACCTCAAAGTTTTAAGAGATGCCCAATCTAGCA CCGCAGTAGAGTCTGGGCATCTCTAAAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAA CCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTC ]
[-] EMBL CF321045 [ TCATTATATCACTGAATAACGACTACATCACAGAATGTCACAGGACGGAAGGCTAGAATTACAATCAGAAGTTCATTTATCCGAATGTGCATCTGATAACCCTCACACATACATACACACACCTCAAAGTTTTAAGAGATGCCCAATCTAGCA CCGCAGTAGAGTCTGGGCATCTCTAAAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAA CCCATGGAACTCGTTTTCATC AGATTGTGTAGGACTGGATGTCACGCAGCAAAACCATTTCTTCGAGTTTGTCTTGGGGGCATATGATTCCACCC TC TCAG TCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATT CCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACG CTGG GTCGTTGACAT CCCATTCACCAAACTTGGGCAAGGGACGACCTGCTTCCTCCGACATGGATTGCGGCGAG ]
[+] EMBL CF279085 [ GAATAACGACTACATCACAGAATGTCACAGGACGGAAGGCTAGAATTACAATCAGAAGTTCATTTATCCGAATGTGCATCTGATAACCCTCACACATACATACACACACCTCATATTTTTAAGAGATGCCCAATCAAGCA CCACAGCAGAGTCTGGGCATTTTTACAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAA CCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCACACAGCAAAACCATTTCTTCGAGTTTGTTTTGGGGGCATATGATTCCACCC TC TCAG TCCTAGTCTCTTTGCAGGGTGAATCAGTATCTTGCCCATT CCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCAGAAG CTGG GTCGTTGACAT CCCATTCACCAAACTTGGGCAAGGGTCGACCTGCTTCCTCCGACATGGATTGCGGCGA ]
[+] EMBL AU225526 [ gccgctAGAATGTCACAGGACGGAAGGCTAGAATTACAATCAGAAGTTCATTTATCCGAATGTGCATCTGATAACCCTCACACATACATACACACACCTCAAAGTTTTAAGAGATGCCCAATCTAGCATTCGCAGTAGAGTCTGGagcgg ]
[-] EMBL CA754100 [ CAGGACGGAAGGCTAGAATACCAATCAGAAGTTCATTTATCCGGATGTGCATCTGATAACCCTCACACATACATACACACACCTCAAAGTTTTAAGAGATGCCCAATCTAGCA CCGCAGTAGAGTCTGGGCATCTCTAAAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAA CCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCACGCAGCAAAACCATTTCTTCGAGTTTGTCTTGGGGGCATATGATTCCACCC TC TCAG TCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATT CCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACG CTGG GTCGTTGACAT CCCATTCACCAAACTTGGGCAAGGGACGACCTGCT TCCGACATGGATTGCGGCGAG ]
[-] EMBL CF339874 [ ACACACACCTCAAAGTTTTAAGAGATGCCCAATCTAGCA CCGCAGTAGAGTCTGGGCATCTCTAAAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAA CCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCACGCAGCAAAACCATTTCTTCGAGTTTGTCTTGGGGGCATATGATTCCACCC TC TCAG TCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATT CCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACG CTGG GTCGTTGACAT CCCATTCACCAAACTTGGGCAAGGGACGACCTGCTTCCTCCGACATGGATTGCGGCGAG ]
[-] EMBL CF338354 [ ACACACCTCAAAG TTTAAGAGATGCCCAATCTAGCA CCGCAGTAGAGTCTGGGCATCTCTAAAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAA CCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCACGCAGCAAAACCATTTCTTCGAGTTTGTCTTGGGGGCATATGATTCCACCC TC TCAG TCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATT CCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACG CTGG GTCGTTGACAT CCCATTCACCAAACTTGGGCAAGGGACGACCTGCTTCCTCCGACATGGATTGCGGCGAG ]
[-] EMBL CF340529 [ ACACACCTCAAAG TTTAAGAGATGCCCAATCTAGCA CCGCAGTAGAGTCTGGGCATCTCTAAAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAA CCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCACGCAGCAAAACCATTTCTTCGAGTTTGTCTTGGGGGCATATGATTCCACCC TC TCAG TCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATT CCCACCCTTTTTCTCATCTCTGGCTGTGTTGAATATCACTGTGAATCCATCAGCGGACG CTGG GTCGTTGACAT CCCATTCACCAAAGCTGGGCAAGGGACGACCTGCTTCCTCCGACATGGATTGCGGCGAG ]
[-] EMBL CF339993 [ CACACCTCAAAGTTTTAAGAGATGCCCAATCTAGCA CCGCAGTAGAGTCTGGGCATCTCTAAAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAA CCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCACGCAGCAAAACCATTTCTTCGAGTTTGTCTTGGGGGCATATGATTCCACCC TC TCAG TCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATT CCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACG CTGG GTCGTTGACAT CCCATTCACCAAACTTGGGCAAGGGACGACCTGCTTCCTCCGACATGGATTGCGGCGAG ]
[-] EMBL CF337147 [ ACACCTCAAAG TTTAAGAGATGCCCAATCTAGCA CCGCAGTAGAGTCTGGGCATCTCTAAAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAACCCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCACGCAGCAAAACCATTTCTTCGAGTTTGTCTTGGGGGCATATGATTCCACCC TC TCAG TCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATT CCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACG CTGG GTCGTTGACAT CCCATTCACCAAACTTGGGCAAGGGACGACCTGCTTCCTCCGACATGGATTGCGGCGAG ]
[-] EMBL CF310988 [ ACACTTCAAAG TTTAAGAGATGCCCAATCTAGCA CCGCAGTAGAGTCTGGGCATCTCTAAAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAA CCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCACGCAGCAAAACCATTTCTTCGAGTTTGTCTTGGGGGCATATGATTCCACCC TC TCAG TCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATT CCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACG CTGG GTCGTTGACAT CCCATTCACCAAACTTGGGCAAGGGACGACCTGCTTCCTCCGACATGGATTGCGGCGAG ]
[-] EMBL CF321540 [ GAGATGCCCAATCTAGCA CCGCAGTAGAGTCTGGGCATCTCTAAAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAA CCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCACGCAGCAAAACCATTTCTTCGAGTTTGTCTTGGGGGCATATGATTCCACCC TC TCAG TCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATT CCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACG CTGG GTCGTTGACAT CCCATTCACCAAACTTGGGCAAGGGACGACCTGCTTCCTCCGACATGGATTGCGGCGAG ]
[-] EMBL CF340595 [ CAGTAGAGTCTGGGCATCTCTAAAAGGTCTTATGGATAGTATGTATATAGCANAATTAAAGGATAGTAATTTTGCAA CCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCACGCAGCAAAACCATTTCTTCGAGTTTGTCTTGGGGGCATATGATTCCACCC TC TCAG TCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATT CCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACG CTGG GTCGTTGACAT CCCATTCACCAAACTTGGGCAAGGGACGACCTGCTTCCTCCGACATGGATTGCGGCGAG ]
[-] EMBL CF335646 [ CTGGGCATCTCTAAAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGGTAGTAATTTTGCAA CCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCGCGCAGCAAAACCATTTCTTCGAGTTTGTCTTGGGGGCATATGATTCCACCC TC TCAG TCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATT CCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACG CTGG GTCGTTGACAT CCCATTCACCAAACTTGGGCAAGGGACGACCCGCTTCCTCCGACATGGATTGCGGCGAG ]
[-] EMBL CF340146 [ GATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAA CCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCACGCAGCANAACCATTTCTTCGAGTTTGTCTTGNGGGCATATGATTCCACCC TC TCAG TCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATT CCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACG CTGG GTCGTTGACAT CCCATTCACCAAACTTGGGCAAGGGACGACCTGCTTCCTCCGACATGGATTGCGGCGAG ]
[-] EMBL CF313903 [ TGCAACCCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCACGCAGCAAAACCATTTCTTCGAGTTTGTCTTGGGGGCATATGATTCCACCCTTC TCAG TCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATTCCCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACG CTGG GTCGTTGACATCCCCATTCACCAAACTTGGGCAAGGGACGACCTGCTTCCTCCGACATGGATTGCGGCGAG ]
[-] EMBL CF279084 [ GTGTAGGACTGGATGTCACACAGCAAAACCATTTCTTCGAGTTTGTTTTGGGGGCATATGATTCCACCC TC TCAG TCCTAGTCTCTTTGCAGGGTGAATCAGTATCTTGCCCATT CCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCAGAAG CTGG GTCGTTGACAT CCCATTCACCAAACTTGGGCAAGGGTCGACCTGCTTCCTCCGACATGGATTGCGGCGAG ]
[-] EMBL AA752241 [ TCTTCGAGTTTGTCTTGGGGGCATATGATTCCACCC TC TCAG TCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATT CCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACG CTGG GTCGTTGACAT CCCATTCACCAAACTTGGGCAAGGGACGACCTGCTTCCTCCGACATGGATTGCGGCGAGCCCGATCCG ]
[-] EMBL AU077475 [ TTCGAGTTTGTCTTGGGGGCATATGATTCCACCC TC TCAG TCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATT CCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACG CTGG GTCGTTGACAT CCCATTCACCAAACTTGGGCAAGGGACGACCTGCTTCCTCCGACATGGATTGCGGCGAG ]
[-] EMBL AU174879 [ TGGGGGCATATGATTCCACCC TC TCAG TCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGNCCATT CCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACG CTGG GTCGTTGACAT CCCATTCACCAAACTTGGGCAAGGGACGACCTGCTTCCTCCGACATGGATTGCGGCGAG ]
consensusID : consensus_16498#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 618 fasta sequence
[AGGACGGAAGGCTAGAATAACAATCAGAAGTTCATTTATCCGGAANGGGCATNTGATAACCTTCACACANACATACACACACTTCAAAGTTTTAAGAGATGGATAGTATGNATATAGCAAAATTAAAGGATAGTAATTTTGCAACCCATGGAATTCGTTTTCATCAAGATTGTGTAGGANTGGATGTCACGCAGCAAAACCATTTCTTGGAGTTTGTCTTGGGGGCATATGATTCCACCCTCTCAGTCCTAGTTTCTTNGCAGGGTGAATCAGTATCTTGCCCATTCCCACCCTTTTTCTCATCTCNGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACGCTGGGTCGTTGACATCCCATTCACCAAACTTGGGCAAGGGACGACCTGCTTCCTCCGACATGGATTGCGGCGAGCCCGATAAGGCGAGCACGAATTCAAAAAAGGTCTCCTCTTCCTCCTCCTCCCAGCGAGTGGGCGGCGCGCGCGGAGAGGGAAGAGACGGGGATGAGAGGAGCACGCAGCAGCAGCGGCAGCGGCGGAGAGGAGAGGAGAGGAGAGGGAGGAAGAGGAGGGAAAAGGGGAGAGGAATCGAAGAAGAAAAGTTTTCTACTC]
[-] EMBL BE228970 [AGGACGGAAGGCTAGAATAACAATCAGAAGTTCATTTATCCGGAANGGGCATNTGATAACCTTCACACANACATACACACACTTCAAAGTTTTAAGAGATGGATAGTATGNATATAGCAAAATTAAAGGATAGTAATTTTGCAACCCATGGAATTCGTTTTCATCAAGATTGTGTAGGANTGGATGTCACGCAGCAAAACCATTTCTTGGAGTTTGTCTTGGGGGCATATGATTCCACCCTCTCAGTCCTAGTTTCTTNGCAGGGTGAATCAGTATCTTGCCCATTCCCACCCTTTTTCTCATCTCNGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACGCTGGGTCGTTGACATCCCATTCACCAAACTTGGGCAAGGGACGACCTGCTTCCTCCGACATGGATTGCGGCGAG ]
[-] EMBL CF278734 [ CCACCCTCTCAGTCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATTCCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACGCTGGGTCGTTGACATCCCATTCACCAAACTTGGGCAAGGGACGACCTGCTTCATCATACATGGATTGCGGCGAGCCCGATAAGGCGAGCACGAATTCAAAAAAGGTCTCCTCTTCCTCCTCCTCCCAGCGAGTGGGCGGCGCGCGCGGAGAGGGAAGAGACGGGGATGAGAGGAGCACGCAGCAGCAGCGGCAGCGGCGGAGAGGAGAGGAGAGGAGAGGGAGGAAGAGGAGGGAAAAGGGGAGAGGAATCGAAGAAGAAAAGTTTTCTACTC]
consensusID : consensus_16498#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 544 fasta sequence
[TTTTTTTTTTTTNTNTCAATAGGTGAGATTCATTATATCACTGAATAACGACTACATCACAGAATGTCACAGGACGGAAGGCTAGAATTACAATCAGAAGTTCATTTATCCGAATGTGCATCTGATAACCCTCACACATACATACACACACCTCAAAGTTTTAAGANATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAACCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCCGCANCAAAACCATTTCTTCNAATTTGTCTTGGGGGCATATGAATCCNCCCCTCANTCCTAATTTCTTTGCAGGGTGNATCAATATCTTGCCCATTCCCCCCCTTTTTCTCATCTCTGGNTTGTTTAATATCCNGTTGAACCCCCNCCGGANCTNGGTCTTTTAAATCCCATCCCCAAANTNGGNANGGGAAACNGCTCCCCCAAATGANTTNGGTCCTTCCAATCCNGCNCCNGGGNTCNTNTTCTNAAGGCCCCCCNGGGAACCCCTTNTCCCTATAAGTTAATC]
[-] EMBL AA753708 [TTTTTTTTTTTTNTNTCAATAGGTGAGATTCATTATATCACTGAATAACGACTACATCACAGAATGTCACAGGACGGAAGGCTAGAATTACAATCAGAAGTTCATTTATCCGAATGTGCATCTGATAACCCTCACACATACATACACACACCTCAAAGTTTTAAGANATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAACCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCCGCANCAAAACCATTTCTTCNAATTTGTCTTGGGGGCATATGAATCCNCCCCTCANTCCTAATTTCTTTGCAGGGTGNATCAATATCTTGCCCATTCCCCCCCTTTTTCTCATCTCTGGNTTGTTTAATATCCNGTTGAACCCCCNCCGGANCTNGGTCTTTTAAATCCCATCCCCAAANTNGGNANGGGAAACNGCTCCCCCAAATGANTTNGGTCCTTCCAATCCNGCNCCNGGGNTCNTNTTCTNAAGGCCCCCCNGGGAACCCCTTNTCCCTATAAGTTAATC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_16498#0 GCTACGTAACGGCATAACAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTATATCAATAGGT 60
consensus_16498#2 ------------------------------------TTTTTTTTTTTTNTNTCAATAGGT 24
consensus_16498#1 ------------------------------------------------------------
consensus_16498#0 GAGATTCATTATATCACTGAATAACGACTACATCACAGAATGTCACAGGACGGAAGGCTA 120
consensus_16498#2 GAGATTCATTATATCACTGAATAACGACTACATCACAGAATGTCACAGGACGGAAGGCTA 84
consensus_16498#1 ----------------------------------------------AGGACGGAAGGCTA 14
**************
consensus_16498#0 GAATTACAATCAGAAGTTCATTTATCCG-AATGTGCATCTGATAACCCTCACACATACAT 179
consensus_16498#2 GAATTACAATCAGAAGTTCATTTATCCG-AATGTGCATCTGATAACCCTCACACATACAT 143
consensus_16498#1 GAATAACAATCAGAAGTTCATTTATCCGGAANGGGCATNTGATAACCTTCACACANACAT 74
**** *********************** ** * **** ******** ******* ****
consensus_16498#0 ACACACACCTCAAAGTTTTAAGAGATGCCCAATCTAGCACCGCAGTAGAGTCTGGGCATC 239
consensus_16498#2 ACACACACCTCAAAGTTTTAAGANATG--------------------------------- 170
consensus_16498#1 ACACACACTTCAAAGTTTTAAGAGATG--------------------------------- 101
******** ************** ***
consensus_16498#0 TCTAAAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAAC 299
consensus_16498#2 ----------------GATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAAC 214
consensus_16498#1 ----------------GATAGTATGNATATAGCAAAATTAAAGGATAGTAATTTTGCAAC 145
********* **********************************
consensus_16498#0 CCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCACGCAGCAAAACCATTT 359
consensus_16498#2 CCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTC-CGCANCAAAACCATTT 273
consensus_16498#1 CCATGGAATTCGTTTTCATCAAGATTGTGTAGGANTGGATGTCACGCAGCAAAACCATTT 205
******** ************************* ******** **** ***********
consensus_16498#0 CTTCGAGTTTGTCTTGGGGGCATATGATTCCACCCTCTCAGTCCTAGTTTCTTTGCAGGG 419
consensus_16498#2 CTTCNAATTTGTCTTGGGGGCATATGAATCCNCCC-CTCANTCCTAATTTCTTTGCAGGG 332
consensus_16498#1 CTTGGAGTTTGTCTTGGGGGCATATGATTCCACCCTCTCAGTCCTAGTTTCTTNGCAGGG 265
*** * ******************** *** *** **** ***** ****** ******
consensus_16498#0 TGAATCAGTATCTTGCCCATTCCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCAC 479
consensus_16498#2 TGNATCAATATCTTGCCCATTCCCCCCCTTTTTCTCATCTCTGGNTT-GTTTAATATC-C 390
consensus_16498#1 TGAATCAGTATCTTGCCCATTCCCACCCTTTTTCTCATCTCNGGCTTTGTTGAATATCAC 325
** **** **************** **************** ** ** *** ****** *
consensus_16498#0 TGTGAATCCATCAGCGGACGCTGGGTCGTTGACATCCCATTCACCAAACTTGGGCAAGGG 539
consensus_16498#2 NGTTGAACCCCCNCCGGAN-CTNGGTCTTTTAAATCCCATCC-CCAAANTNGGNANGGGA 448
consensus_16498#1 TGTGAATCCATCAGCGGACGCTGGGTCGTTGACATCCCATTCACCAAACTTGGGCAAGGG 385
** * ** * **** ** **** ** * ******* * ***** * ** **
consensus_16498#0 ACGACCTGCTTCCTCCGACATGGATTGCGGCGAGCCCGATCCGGCGA---CAAATCCGGG 596
consensus_16498#2 AACNGCTCCCCCAAATGANTTNGGTCCTTCCAATCCNGCNCCNGGGNT--CNTNTTCTNA 506
consensus_16498#1 ACGACCTGCTTCCTCCGACATGGATTGCGGCGAGCCCGATAAGGCGAGCACGAATTCAAA 445
* ** * * ** * * * * * ** * * * * * *
consensus_16498#0 AAGTTCCTCT-----CCNCNCCNCCACAATGGCGGC------------------------ 627
consensus_16498#2 AGGCCCCCCNGGGAACCCCTTNTCCCTATAAGTTAATC---------------------- 544
consensus_16498#1 AAAGGTCTCCTCTTCCTCCTCCTCCCAGCGAGTGGGCGGCGCGCGCGGAGAGGGAAGAGA 505
* * * * * ** *
consensus_16498#0 ------------------------------------------------------------
consensus_16498#2 ------------------------------------------------------------
consensus_16498#1 CGGGGATGAGAGGAGCACGCAGCAGCAGCGGCAGCGGCGGAGAGGAGAGGAGAGGAGAGG 565
consensus_16498#0 -----------------------------------------------------
consensus_16498#2 -----------------------------------------------------
consensus_16498#1 GAGGAAGAGGAGGGAAAAGGGGAGAGGAATCGAAGAAGAAAAGTTTTCTACTC 618
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||