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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16536#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1795 fasta sequence
[GCCACCGCTAGGATCGATCGAACACCATGGCGAAGAAGAAGACGTCGTCGTCCATGGCGAGATCGCAGCTGGCGGCGCTGCTCATCTCCCTGTGCTTCCTCTCCCTCGCGTCGAACGCCGTTGGGTGGAGCAGGAGAGGGGAGCGGGAGGAGGAGGACGAACGGCGGCGCCACGGCGGCGAGGGCGGGAGGCCGTACCACTTAGGGGAGGAGAGCTTCCGGCACTGGACGAGGACGCGGCACGGGCGGTTCAGCGTGCTGGAGAGGTTCCCCGACGAGCAGGTGGTGGGCGCCGCCGTCGGGGGGTACCGCGTCGCCGTGCTGGAGGCGGCGCCGCGCGCGTTCCTGCAGCCCAGCCACTACGACGCCGACGAGGTGTTCTACGTCAAGGAGGGCGAGGGCGTGATCGTGCTGCTGCGTGAGGGGAGGAGGGAGTCGTTCTGCGTGAGGGAGGGCGACGCCATGGTCATCCCCGCCGGCGCCATCGTCTACTCCGCCAACACACACAGCTCCAAGTGGTTCCGCGTCGTCATGCTGCTCAACCCCGTCTCCACTCCCGGCCACTTCGAGGAATACTTCCCCGTCGGCGGCGACCGGCCGGAGTCGTTCTTCAG-CGCGTTTAGCGACGACGTTCTGCAGGCGGCGTTCAACACTCGCCGGGAAGAAT-TGGAGAAGGTGTTCGAGAGGCAGC-GGGAGGGCGGCGAGATCACGACGGCGCCGGAGGAGCAGATACGGGAGCTGAGCAAGT-CGTGCTCCCGCGGCGGCGGCGGCGGCTCGGGTTCTGAGTGGGAAATCAAGCCGTCCAGCCTCACCGGCAAGAGTC-CGTACTTCTCCAAC-AACCACGGCAAGCTGTTCGAGCTCACCGGCGACGAGTGCCGCCACCTC-AAGAAGCTCGACCTGCAGATCGGCCTCGCCAACATCACCCGCGGCTCG-ATGATTGCGCCGAACTACAACACCCGCGCC-ACCAAGCTCGCCGTCGTCCTG-CAGGGCAGCGGCTACTTTGAGATGGCGTGCCCACACGTGTCCGGCGGCGGCTCGTCGGAGCGCCGGGAGCGCGAG-CGCGAGCACGGGAGGAGGAGGGAGGAGGAACAGGGAGAGGAGGAGCACGGCGAGCGCGGGGAGAAGGCG-AGGAGGTACCACAAGGTGAGGGCGC-AGGTTCGGGAGG-AGT-CGGTGATCGTGATCCCCGCGTCGCACCCGGCGACGATCGTCGCCAGCG-AGGGCGAGAGCCTCGCCGTCGTCTGCTTCTTCGTCGGCGCCAACCACGACGAGAAGGTGTTCCTCGCCGGCAGGAACAGCCCGCTGAGGCAGCTCGACGACCCGGCCAAGAAGCTCGTGTTCGGCGGCTCCGCGGCGAGGGAAGCGGACCGCGTGCTCGCCGCGCAGCCGGAGCAGATCTTGCTGCGCGGCCCGCACGGCCGCGGCAGCGTCTCCGACATGTAACGCGACGCGACGACGTCCCCTGCACCCGGCGCGCGTACGCCGAGCAGCTGTGTGATCGAGAGGAATAAGTTGGTACACGTAGGCCACGCGTCGTGTACAGTACAAAATACGGTACCGTACTGCGTGTACGTGTAGCCAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTATGTATCGATGGAACTGTATGAACCCAAGTACGGAGTGCTATATTACTAATGCAGAGTACGTTCTGCTACTAAAAAAAAAGCGTCGTTTGGGCAAGTTTGATTTGTAATTAAATTACTCATAAGCGGAGTCGTACATAATCGCGAACCAAAAAAA]
[+] EMBL AK121667 [GCCACCGCTAGGATCGATCGAACACCATGGCGAAGAAGAAGACGTCGTCGTCCATGGCGAGATCGCAGCTGGCGGCGCTGCTCATCTCCCTGTGCTTCCTCTCCCTCGCGTCGAACGCCGTTGGGTGGAGCAGGAGAGGGGAGCGGGAGGAGGAGGACGAACGGCGGCGCCACGGCGGCGAGGGCGGGAGGCCGTACCACTTAGGGGAGGAGAGCTTCCGGCACTGGACGAGGACGCGGCACGGGCGGTTCAGCGTGCTGGAGAGGTTCCCCGACGAGCAGGTGGTGGGCGCCGCCGTCGGGGGGTACCGCGTCGCCGTGCTGGAGGCGGCGCCGCGCGCGTTCCTGCAGCCCAGCCACTACGACGCCGACGAGGTGTTCTACGTCAAGGAGGGCGAGGGCGTGATCGTGCTGCTGCGTGAGGGGAGGAGGGAGTCGTTCTGCGTGAGGGAGGGCGACGCCATGGTCATCCCCGCCGGCGCCATCGTCTACTCCGCCAACACACACAGCTCCAAGTGGTTCCGCGTCGTCATGCTGCTCAACCCCGTCTCCACTCCCGGCCACTTCGAGGAATACTTCCCCGTCGGCGGCGACCGGCCGGAGTCGTTCTTCAG CGCGTTTAGCGACGACGTTCTGCAGGCGGCGTTCAACACTCGCCGGGAAGAAT TGGAGAAGGTGTTCGAGAGGCAGC GGGAGGGCGGCGAGATCACGACGGCGCCGGAGGAGCAGATACGGGAGCTGAGCAAGT CGTGCTCCCGCGGCGGCGGCGGCGGCTCGGGTTCTGAGTGGGAAATCAAGCCGTCCAGCCTCACCGGCAAGAGTC CGTACTTCTCCAAC AACCACGGCAAGCTGTTCGAGCTCACCGGCGACGAGTGCCGCCACCTC AAGAAGCTCGACCTGCAGATCGGCCTCGCCAACATCACCCGCGGCTCG ATGATTGCGCCGAACTACAACACCCGCGCC ACCAAGCTCGCCGTCGTCCTG CAGGGCAGCGGCTACTTTGAGATGGCGTGCCCACACGTGTCCGGCGGCGGCTCGTCGGAGCGCCGGGAGCGCGAG CGCGAGCACGGGAGGAGGAGGGAGGAGGAACAGGGAGAGGAGGAGCACGGCGAGCGCGGGGAGAAGGCG AGGAGGTACCACAAGGTGAGGGCGC AGGTTCGGGAGG AGT CGGTGATCGTGATCCCCGCGTCGCACCCGGCGACGATCGTCGCCAGCG AGGGCGAGAGCCTCGCCGTCGTCTGCTTCTTCGTCGGCGCCAACCACGACGAGAAGGTGTTCCTCGCCGGCAGGAACAGCCCGCTGAGGCAGCTCGACGACCCGGCCAAGAAGCTCGTGTTCGGCGGCTCCGCGGCGAGGGAAGCGGACCGCGTGCTCGCCGCGCAGCCGGAGCAGATCTTGCTGCGCGGCCCGCACGGCCGCGGCAGCGTCTCCGACATGTAACGCGACGCGACGACGTCCCCTGCACCCGGCGCGCGTACGCCGAGCAGCTGTGTGATCGAGAGGAATAAGTTGGTACACGTAGGCCACGCGTCGTGTACAGTACAAAATACGGTACCGTACTGCGTGTACGTGTAGCCAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTATGTATCGATGGAACTGTATGAACCCAAGTACGGAGTGCTATA ]
[+] EMBL AY098743 [ AAGAAGACGTCGTCGTCCATGGCGAGATCGCAGCTGGCGGCGCTGCTCATCTCCCTGTGCTTCCTCTCCCTCGCGTCGAACGCCGTTGGGTGGAGCAGGAGAGGGGAGCAGGAGGAGGAGGACGAACGGCGGCGCCACGGCGGCGAGGGCGGGAGGCCGTACCACTTAGGGGAGGAGAGCTTCCGGCACTGGACGAGGACGCGGCACGGGCGGTTCAGCGTGCTGGAGAGGTTCCCCGACGAGCAGGTGGTGGGCGCCGCCGTCGGGGGGTACCGCGTCGCCGTGCTGGAGGCGGCGCCGCGCGCGTTCCTGCAGCCCAGCCACTACGACGCCGACGAGGTGTTTTACGTCAAGGAGGGCGAGGGCGTGATCGTGCTGCTGCGTGAGGGGAGGAGGGAGTCGTTCTGCGTGAGGGAGGGCGACGCCATGGTCATCCCCGCCGGCGCCATCGTCTACTCCGCCAACACACACAGCTCCAAGTGGTTCCGCGTCGTCATGCTGCTCAACCCCGTCTCCACTCCCGGCCACTTCGAGGAATACTTCCCCGTCGGCGGCGACCGGCCGGAGTCGTTCTTCAG CGCGTTTAGCGACGACGTTCTGCAGGCGGCGTTCAACACTCGCCGGGAAGAAT TGGAGAAGGTGTTCGAGAGGCAGC GGGAGGGCGGCGAGATCACGACGGCGCCGGAGGAGCAGATACGGGAGCTGAGTAAGT CGTGCTCCCGCGGCGGCGGCGGCGGCTCGGGTTCTGAGTGGGAAATCAAGCCGCCCAGCCTCACCGGCAAGAGTC CGTACTTCTCCAAC AACCACGGCAAGCTGTTCGAGCTCACCGGCGACGAGTGCCGCCACCTC AAGAAGCTCGACCTGCAGATCGGCCTCGCCAACATCACCCGCGGCTCG ATGATTGCGCCGAACTACAACACCCGCGCC ACCAAGCTCGCCGTCGTCCTG CAGGGCAGCGGCTACTTTGAGATGGCGTGCCCACACGTGTCCGGCGGCGGCTCGTCGGAGCGCCGGGAGCGCGAG CGCGAGCACGGGAGGAGGAGGGAGGAGGAACAGGGAGAGGAGGAGCACGGCGAGCGCGGGGAGAAGGCG AGGAGGTACCACAAGGTGAGGGCGC AGGTTCGGGAGG GGT CGGTGATCGTGATCCCCGCGTCGCACCCGGCGACGATCGTCGCCAGCG AGGGCGAGAGCCTCGCCGTCGTCTGCTTCTTCGTCGGCGCCAACCACGACGAGAAGGTGTTCCTCGCCGGCAGGAACAGCCCGCTGAGGCAGCTCGACGACCCGGCCAAGAAGCTCGTGTTCGGCGGCTCCGCGGCGAGGGAAGCGGACCGCGTGCTCGCCGCGCAGCCGGAGCAGATCTTGCTGCGCAGCCCGCACGGCCGCGGCAGCGTCTCCGACATGTAACGCGACGCGACGACGTCCCCTGCACCCGGCGCGCGTACGCCGAGCAGCTGTGTGATCGAGAGGAATAAGTTGGTACACGTAGGCCACGCGTCGTGTACAGTACAAAATACGGTACCGTACTGCGTGTACGTGTAGCCAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTATGTATCGATGGAACTGTATGAACCCAAGTACGGAGTGCTATATTACTAATGCAGAGTACGTTCTGCTACTAATTAACCTGCGTCGTTTGGGCAAGTTTGATTTGTAATTAAATTACTCATAAGCGGAGTCGTACATAATCGCGAACCAAAAAAA]
[+] EMBL OSC794 [ CGTNAGGNAGGGCGACGCCATGGTCATCCCCGCCGGCGCCATCGTCTACTCCGCCAACACACACAGCTCCAAGTGGTTCCNCGTCGTCATGCTGCTCAACCCCGTNTCCACTCCCGGCCACTTCNAGGAATACTTCCCCGTCGGCGGCGACCGGCCGGAGTNGTTCTTNAG CGCGTTTAG GACGACGTTNTGCAGGCGGCGTTCAACACTCGCCGGGAAGAAT TNGAGAAGGTGTTCGAAAGGCAGC GGGAGGNCGGCGAGATCACGACGGCGCCGGAGGAGCAGATACGGGAGCTGAGCAAGTNCGT ]
[+] EMBL C73575 [ GCCGGCGCCATCGTCTACTCCGCCAACACACACAGCTCCAAGTGGTTCCGCGTCGTCATGCTGCTCAACCCCGTCTCCACTCCCGGCCACTTCGAGGAATACTTCCCCGTCGGCGGCGACCGGCCGGAGTCGTTCTTCAG CGCGTTTAG GACGACGTTCTGCAGGCGGCGTTCAACACTCGCCGGGAAGAAT TGGAGAAGGTGTTCGAGAGGNAGCNGGAANGCCGGCGAAANCACGACGGCGCNGGAGGAGCAG ]
[+] EMBL AF051154 [ GGCGACCGGCCGGAGTCGTTCTTCAG CGCGTTTAGCGACGACGTTCTGCAGGCGGCGTTCAACACTCGCCGGGAAGAAT TGGAGAAGGTGTTCGAGAGGCAGC GGGAGGGCGGCGAGATCACGACGGCGCCGGAGGAGCAGATACGGGAGCTGAGCAAGT CGTGCTCCCGCGGCGGCGGCGGCGGCTCGGGTTCTGAGTGGGAAATCAAGCCGTCCAGCCTCACCGGCAAGAGTC CGTACTTCTCCAAC AACCACGGCAAGCTGTTCGAGCTCACCGGCGACGAGTGCCGCCACCTC AAGAAGCTCGACCTGCAGATCGGCCTCGCCAACATCACCCGCGGCTCGAATGATTGCGCCGAACTACAACACCCGCGCC ACCAAGCTCGCCG ]
[+] EMBL BQ172735 [ CCGGAGTCGTTCTTCAGACGCGTTTAGCGACGACGTTCTGCAGGCGGCGTTCAACACTCGCCGGGAAAAATATGGAGAAGGTGTTCGAGAGGCAGC GGGAGGGCGGCGAGATCACGACGGCGCCGGAGGAGCAGATACGGGAGCTGAGCAAGT CGTGCTCCCGCGGCGGCGGCGGCGGCTCGGGTTCTGAGTGGGAAATCAAGCCGTCCAGCCTCACCGGCAAGAGTCACGTACTTCTCCAACAAACCACGGCAAGCTGTTCGAGCTCACCGGCGACGAGTGCCGCCACCTCAAAGAAGCTCGACCTGCAGATCGGCCTCGCCAACATCACCCGCGGCTCG ATGATTGCGCCGAACTACAACACCCGCGCCAACCAAGCTCGCCGTCGTCCTG CAGGGCAGCGGCTACTTTGAGATGGCGTGCCCACACGTGTCCGGCGGCGGCTCGTCGGAGCGCCGGGAGCGCGAG CGCGAGCACGGGAGGAGGAGGGAAGAGGAACTGGGAAAGGATGA CCCNGCAAACGCCGGGAAAAAGCG AGGANGTCACACCAGGTGTAGGCAC CGGTCCGGAAG ]
[+] EMBL OSC206 [ ACACTCGCCGGGAAGAAT TGGAGAAGGTGTTCGANAGGCAGC GGGAGGGCGGCGAGATCACGACGGCGCCGGAGGAGCAGATACGGGAGCTGAGCAAGT CGTGCTCCCGCGGCGGCGGCGGCGGCTCGGGTTCTNAGTGGGAAATCAAGCCGTCCAGCCTCACCGGCAAGAGTC CGTACTTNTCCAAC AACCACGGCAAGCTGTTCGAGCTCACCGGCGACGAGTGCCGCCACCTC AAGAAGCTCGACCTGCAGATCGGCCTCGCCAACATCACCNGCGGCTCG ]
[+] EMBL OSC332 [ GCAGC GGGAGGGCGGCGAGATCACGACGGCGCCGGAGGAGCAGATACGGGAGCTGAGCAAGT CGTGCTCCCGCGGCGGCGGCGGCGGCTCGGGTTCTGAGTGGGAAATCAAGCCGTCCAGCCTCACCGGCAAGAGTC CGTACTTCTCCAAC AACCACGGCAAGCTGTTCGAGCTCACCGGCGACGAGTNCCGCCACCTC AAGAAGCTCGACCTGCAGATCGGCCTCGCCAACATCACCCGCGGCTCG ATGATTGCGNCG ]
[+] EMBL OSC675 [ cnatAGCCGTCCAGCCTCACCGGCAAGATTC CGTACTTNTCCAAC AACCACGGCNAGCTGTTCGANCTCACCGGCGACGAGTGCCGCCACCTC AAGAAGCTCGACCTGCAGATCGGCCTCGCCAACATCACCCGCGGCTCG ATGATTGCNCCGAACTACAACACCCGCGCC ACCAAGCTCGCCGTCNTCCTG CAGGGCAGCGGCTACTTTAANATGGCGTGCCCACACGTTTCCGGCGGCGGCTCGTCGGAGCGCCGGGAGCGCGAGNCG AAGCACGGGAGGAGGAGGGAGGAGGAACAGGGAGAGGAGGAGCACGGCGAGCGCGGGGAGAAGGCGAAGGAGGTACCACAAAGTNAGGGCGCAAGTTTCGGGAGGAATT CGGTNATtc ]
[+] EMBL U45320 [ CTCACCGGCAAGAGTC CGTACTTCTCCAAC AACCACGGCAAGCTGTTCGAGCTCACCGGCGACGAGTGCCGCCACCTC AAGAAGCTCGACCTGCAGATCGGCCTCGCCAACATCACCCGCGGCTCG ATGATTGCGCCGAACTACAACACCCGCGCC ACCAAGCTCGCCGTCGT CTGCCAGGGCAGCGGCTACTTTGAGATGGGCTGCCCACACGTGTCCGGC GCGGCTCGTCGGA CGCCGGGA CGAG CGCGAGCACGGGAGGAGGAGGGAGGAGGAACAGGGAGAGGAGGAGCACGGCGAGCGCGGGGAGAAGGCG AGGAGGTACCACAAGGTGAGGGCGC AGGTTCGGGAGG GGT CGGTGATCGTGATCCCCGCGTCGCACCCG GACCATCGT CAGGCG AGGGCGAGAG CTC CGGTCGTCTGCTTCTTCGTCGGCGCCAACCACGACGAGAAGGTGTT ]
[+] EMBL U45321 [ CTCACCGGCAAGAGTC CGTACTTCTCCAAC AACCACGGCAAGCTGTTCGAGCTCACCGGCGACGAGTGCCGCCACCTC AAGAAGCTCGACCTGCAGATCGGCCTCGCCAACATCACCCGCGGCTCG ATGATTGCGCCGAACTACAACACCCGCGCC ACCAAGCTCGCCGTCGTCCTG CAGGGCAGCGGCTACTTTGAGATGGCGTGCCCACACGTGTCCGGCGGCGGCTCGTCGGAGCGCCGGGAGCGCGAG CGCGAGCACGGGAGGAGGAGGGAGGAGGAACAGGGAGAGGAGGAGCACGGCGAGCGCGGGGAGAAGGCG AGGAGGTACCACAAGGTGAGGGCGC AGGTTCGGGAGG GGT CGGTGATCGTGATCCCCGCGTCGCACCCGGCGACGATCGTCGCCAGCG AGGGCGAGAGCCTCGCCGTCGTCTGCTTCTTCGTCGGCGCCAACCACGACGAGAAGGTGTTCCTCGCCGGCAGGAACAGCCCGCTGAGGCAGCTCGACGACCCGGCCAAGAAGCTCGTGTTCGGCGGCTCC ]
[+] EMBL AU163793 [ gcaACGNCGAACGCGGGGAGAAGGCG AGGAGGTA CACAAGTTGAGGGCGC AGGTTCGGGAGG AGTCCGGTGATCGTGATCCCCGCGTCGCACCCGGCGACGATCGTCGCCAGCGAAGGGCGAGAGCCTCGCCGTCGTCTGCTTCTTCGTCGGCGCAAACCACGACGAGAAGGTGTTCCTCGCCGGCAGGAACAGCCCGCTGAGGCAGCTCGACGACCCGGCCAAGAAGCTCGTGTTCGGCGG TCCGCGGCGAGGGAAGCGGACCGCGTGCTCGCCGCGCAGCCNGAGCAGATCTTG TGCGCGGCCCGCACNGCCGCGGCAGCGTCTCCGACATGTAACGCGACGCGACGACGTCCCCTGCACCCGGCGCGCGTACGCCGAGCAGCTGTGTGATCGAGAGGAATAAGTTGGTACACGTAGGCCACGCGTCGTGTACAGTACAAAATACGGTACCGTA TGCGTGTACGTGTAGCCAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTATGTATCGATGGAACTGTATGAACCCAAGTACGGAGTGCTATATTACTAATGCAGAGTACGTTCTGCTACTAAACAAAAA ]
[+] EMBL C99366 [ CGAGCGCGGGGAGAAGGCG AGGNGGTACCACAAGGTGAGGGCGC AGGTTCGGGAGG AGT CGGTGATCGTGATCCCCGCGTNGCACCCGGCGACGATCGTCGCCAGCG AGGGCGAGAGCCTCGCCGTCGTCTGCTTCTTCGTCGGCGCNAACCACGACGAGAAGGTGTTCCTCGCCGGCAGGAACAGCCCGCTGAGGCAGCTCGACGACCCGGCCAAGAAGCTCGTGTTCGGCGG TCCGCGGCGAGGGAAGCGGACCGCGTGCTCGCCGCGCAGCCGGAGCAGATCTTG TGCGCGGCCCGCACGGCCGCGGCAGC TCTCCGACATGTAACGCGACGCGACGACGTCCCCTGCACCCGGCGCGCGTACGCCGAGCAGCTGTGTGATCGAGAGGAATAAGTTGGTACACGTAGGCCACGCGTCGTGTACAGTACAAAATACGGTACCGTA TGCGTGTACGTGTAGCCAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTATGTATCGATGGAACTGTATGAACCCAAGTACGGAGTGCTATATTACTAATGCAGAGTACGTTCTGCTAAAAAAAAAAAAaaa ]
[+] EMBL AU162224 [ GGCGGCTCCGCGGCGAGGGAAGCGGACCGCGTGCTCGCCGCGCAGCCGGAGCAGATCTTGCTGCGCGGCCCGCACGGCCGCGGCAGCGTCTCCGACATGTAACGCGACGCGACGACGTCCCCTGCACCCGGCGCGCGTACGCCGAGCAGCTGTGTGATCGAGAGGAATAAGTTGGTACACGTAGGCCACGCGTCGTGTACAGTACAAAATACGGTACCGTACTGCGTGTACGTGTAGCCAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTATGTATCGATGGAACTGTATGAACCCAAGTACGGAGTGCTATATTACTAATGCAGAGTACGTTCTGCTA ]
[+] EMBL AU094403 [ nGCGTACNCCGAGCAGCTGTGTGATCGAGAGGAATAAGTTGGTACACGTAGGCCACGCGTCGTGTACAGTACAAAATACGGTACCGTA TGCGTGTACGTGTANCNAAGGGGANGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGNGTATTAGCTGAGGTATGTATCGATGGAACTGTATGAACCNAAGTACGGNGTGCTATATTACTAATGCAGAGTACGTTCTGNTNNTAAAAAAnnn ]
[+] EMBL AA751380 [ ACGTAGGCCACGCGTCGTGTACAGTACAAAATACGGTACCGTACTGCGTGTACGTGTAGCCAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTATGTATCGATGGAACTGTATGAACCCAAGTACGGAGTGCTATATTACTAA ]
consensusID : consensus_16536#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 634 fasta sequence
[AGTCACCACAAGGTGAGGGCCAGTTC-GGAGGGTCGGTGATCGT-GATCCCCGCGTCGCACCCGCGACG-ATCT-TCGCCAGCGAGGGCGAGA-CCT-C-CCGTCGTCTGCTTCTTCGTCGGCGCCA-ACCACGACGAGAAGGTGTTCCTCGCCGGC-AGGAACAGCCCGCTGAG-GCAGCTCGACG-ACCCGGCCA-AGAAGCTC-GT-GTTCG-GCGGCTCCGCGGCGAGGGAGGCGGACCGCGTGCTC-CCGCGCAGCCGGAGC-AGATCTTGCTGCGCGGCCCGCACGGCCGCGGCAGCGTCTCCGACATGTAAGCGCG-CCGCGCCGGCGCGCGCCGCG-CGACGCGA-CGCGACGACGTCCCCTGCA-CCCGGCGCGCGTACGCCGAGCAGCTGTGTGATCGAGAGGAATAA-G-TTGGTA-CACGTAGGCCACGCGTCG-TGTACAG-TAC-AAATACGGT-ACCGTACTGCGTGTACGTGTAG-C-CAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTATGTATCGATGGAACTGTATGAACCCAAGTACGGAGTGCTATATTACTAATG-CAGAGTACGTTCTGCTACTAA--AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BI802797 [AGTCACCACAAGGTGAGGGCCAGTTC GGAGGGTCGGTGATCGTGGATCCCCGCGTCGCACCCGCGACG ATCTGTCGCCAGCGAGGGCGAGACCCT C CCGTCGTCTGCTTCTTCGTCGGCCCCA ACCACGACGAGAAGGTGTTCCTCGCCGGC AGGAACAGCCC CTGA GCAGCTCGACG ACCCGGCCA AGAAGCTC GT GTTCG GCGGCTCCGCGGCGAGGGA GCGGACCGCGTGCTC CCGC CAGCCGGA C AGATCTTGCTGCGCGGCCCGCACGGCCGCGGCAGCGTCTCCGACATGTAAGCGCG CCGCGCCGGCGCGCGCCGCG CGACGCGA CGCGACGACGTCCCCTGCACCCCGGCGCGCGTACGCCGAGCAGCTGTGTGATCGAGAGGAATAA G TTGGTA CACGTAGGCCACGCGTCG TGTACAG TAC AAATACGGT ACCGTACTGCGTGTACGTGTAG C CAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTATGTATCaaaaa ]
[+] EMBL BI800788 [ CCAGTTC GGAGGGTC GT ATCGT GATCCCCGCGTCGCACCCGCGACG ATCT TC CCAGCGAGGGCGAGA CT C CC TCGTCTGCTTCTTCGTCGGCGCCA ACCACGACGAGAAGGTGTTCCTC CC GC AGGAACAGCCC CTGAG CCAGCTCGACG ACCC GCCA AGAAGCTC GT GTTCG GCGGCTCCCCGGCGAGGGA GCGGACCGCGTGCTC CCGCGCA CCGGACCAAGATCTTGCTGCGCGGCCCGCACGGCCGCGGCAGCGTCTCCGACATGTAAGCGC CCGCGCCGGCGCGCACCGCG CGACGCGA CGCGACGACGTCCCCTGCA CCCGGCGCGCGTACGCCGAGCA CTGTGTGATCGAGAGGAATAA G TTGGTA CACGTAGGCCACGCGTCG TGTACAG TAC AAATACGGT ACCGTACTGCGTGTACGTGTAG C CAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTATGTATCGATGGAACTGTATGAACCCAAGTACGGAGTGCTATATTACTAATG CAGAGTACGTTCTGCTACTAA AAAAAAAA ]
[+] EMBL BI801897 [ GTTCGGGAGGGTCGGTGATCGT GATCCCCGCGTCGCACCCGCGACG ATCG TCGCCAGCGAGGGCGAGAGCCT C CCGTCGTCTGCTTCTTCGTCGGCGCCA ACCACGACGAGAAGGTGTTCCTCGCCGGC AGGAACAGCCCGCTGAGTGCAGCTCGACG ACCCGGCCAGAGAAGCTCTGT GTTCGTGCGGCTCCGCGGCGAGGGA GCGGACCGCGTGCTC CCGCCCAGCCGGAGC AGATCTTGCTGCCCGGCCCGCACGGCCCCGGCAGCGTCTCCGACATGTAAGCGC CCGCGCCGGCGCGCGCCGCG CGACGCGAGGGCGACGACGTCCCCTGCAGCCCGGCGCGCGTACGCCGAGCAGCTGTGTGATCGAGAGGAATAATG TTGGTA CACGTAGGCCACGCGTCG TGTACAG TAC AAATACGGT ACCGTACTGCGTGTACGTGTAG C CAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTATGTATCGATGGAACTGTATGAACCCAAGTACGGAGTGCTATATTACTAATG CAGAGTACGTTCTGCTACTAA AAAA ]
[+] EMBL BI801119 [ CCGCGACGTTTCT TCGCCAGCGAGGCCGAGA CCTCC CCGTCGTCTGCTTCTTCGTCGGCGCCATACC CGACGAGAAGGTGTTCCTCGCCGGC AGGACCAGCCCGCTGA GCAGCTCGACG ACCC GCCA AGAAGCTC GT GTTCG GCGGCTCCGCGGCGAGGGAGGCGGACCGCGTGCTCGCCGCGCAGCCGGA C AGATCTTGCTGCGCGGCCCGCACGGCCGCGGCAGCGTCTCCGACATGTAAGCGCG CCGCGCCGGCGCGC CCGCG CGACGCGA CGCGACGACGTCCCCTGCA CCCGGCGCGCGTACGCCGAGCAGCTGTGTGATCGAGAGGAATAA G TTGGTA CACGTAGGCCACGCGTCG TGTACAG TACAAAATACGGT ACCGTACTGCGTGTACGTGTAG C CAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTATGTATCGATGGAACTGTATGAACCCAAGTACGGAGTGCTATATTACTAATG CAGAGTACGTTCTGCTACTAA AAAA ]
[+] EMBL BI802984 [ gacg CCT CGCCGTCGTCTGCTTCTTCGTCGGCGCCA ACCACGACGAGAAGGTGTTCCTCGCCGGC AGGAACAGCCCGCTGAG GCAGCTCGACG ACCCGGCCA AGAAGCTC GTCGTTCG GCGGCTCCGCGGCGAGGGAGGCGGACCGCGTGCTCGCCGCGCAGCCGGAGC AGATCTTGCTGCGCGGCCCGCACGGCCGCGGCAGCGTCTCCGACATGTAAGCGCGACCGCGCCGGCGCGCGCCGCG CGACGCGA CGCGACGACGTCCCCTGCA CCCGGCGCGCGTACGCCGAGCAGCTGTGTGATCGAGAGGAATAA G TTGGTA CACGTAGGCCACGCGTCGATGTACAGCTACAAAATACCCTCACCGTACTGCGTGTACGTGTAG C CAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTATGTATCGATGGAACTGTATGAACCCAAGTACGGAGTGCTATATTACTAA C CCGAGTACGTTCTGCTACTAA TTAAAAAAAA ]
[+] EMBL BI801891 [ GTCGTCTGCTTCTTCGTCGGCCCCT ACCCCGACGAGAAGGTGTTCCTCGCCGGCAAGGAACAGCCCGCTGAG TCAGCTCGACGTACCCGGCCA AGAAGCTC GT GTTCG GCGGCTCCGCGGCGAGGGAGCCGGACCGCGTGCTC CCGCCCAGCCGGAGC AGATCTTGCTGC CGGCCCGCACGGCCGCGGCAGCGTCTCCGACATGTAAGCGCG CCGCGCCGGCGCGCGCCGCG CGACGCGA CGCGACGACGTCCCCTGCA CCCGGCGCGCGTACGCCGAGCAGCTGTGTGATCGAGAGGAATAA G TTGGTA CACGTAGGCCACGCGTCG TGTACAG TACAAAATACGGT ACCGTACTGCGTGTACGTGTAG C CAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTATGTATCGATGGAACTGTATGAACCCAAGTACGGAGTGCTATATTACTAATC CAGAGTACGTTCTGCTAC ]
[+] EMBL BI800518 [ CCACGACGAGAA GTGTTCCTCGCCGGC AGGAACAGCCCGCTGAG GCAGCTCGACG ACCCGGCCA AGAAGCTC GT GTTCG GCGGCTCCGCGGCGAGGGAGGCGGACCGCGTGCTCGCCGCGCAGCCGGAGC AGATCTTGCTGCGCGGCCCGCACGGCCGCGGCAGCGTCTCCGACATGTAAGCGC CCGCGCCGGCGCGCGCCGCGTCGACGCGA CGCGACGACGTCCCCTGCA CCCGGCGCGCGTACGCCGAGCAGCTGTGTGATCGAGAGGAATAA G TTGGTA CACGTAGGCCACGCGTCG TGTACAG TAC AAATACGGT ACCGTACTGCGTGTACGTGTAG C CAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTATGTATCGATGGAACTGTATGAACCCAAGTACGGAGTGCTATATTACTAATG CAGAGTACGTTCTGCTACTAA AAAAA ]
[+] EMBL BI799290 [ GCGAGGGAGGCGGACCGCGTGCTCGCCGCGCAGCCGGAGC AGATCTTGCTGCGCGGCCCGCACGGCCGCGGCAGCGTCTCCGACATGTAAGCGCG CCGCGCCGGCGCGCGCCGCG CGACGCGA CGCGACGACGTCCCCTGCA CCCGGCGCGCGTACGCCGAGCAGCTGTGTGATCGAGAGGAATAA G TTGGTA CACGTAGGCCACGCGTCG TGTACAG TAC AAATACGGT ACCGTACTGCGTGTACGTGTAG C CAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTATGTATCGATGGAACTGTATGAACCCAAGTACGGAGTGCTATATTACTAATG CAGAGTACGTTCTGCTACTAA AAA ]
[+] EMBL BI804604 [ CGC CCGCGCCGGCGCGC CCGCG CGACGCGA CGCGACGACGTCCCCTGCA CCCGGCGCGCGTACGCCGAGCAGCTGTGTGATCGAGAGGAATAA GATTGGTA CACGTAGGCCACGCGTCG TGTACAG TAC AAATACGGT ACCGTACTGCGTGTACGTGTAG C CAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTATGTATCGATGGAACTGTATGAACCCAAGTACGGAGTGCTATATTACTAATG CAGAGTACGTTCTGCTACTAA AAAA ]
[+] EMBL AU094379 [ tnTGTGATCGAGAGGAATAA G TTGGTACCACGTAGGCCACGCGTCG TGTACAG TACAAAATACGGT ACCGTACTGCGTGTACGTNTAG C CAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTATGTATCGATGGAACTGTATGANCCCAAGTACGGAGTGCTATATTACTAATG CAGAGTACGTTCTGCTACTAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BI803144 [ acaagtcacAC AAATACGGT ACCGTACTGCGTGTACGTGTAGACACAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTA CTGAGGTATGTATCGATGGAACTGTATGAACCCAAGTACGGAGTGCTATATTACTAATGCCAGAGTACGTTCTGCTACTTA AAAAA ]
consensusID : consensus_16536#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 630 fasta sequence
[GCCACCAAGTCTTCCCGTCGTCCTGCAGGGCCACCGGGCATACCTTTTGAGGATGCGCGTCCCCACACGGTTCCGCGCGG-C-TCGT--CGGAGCCC-----GGGA-GCGCCGAGCGCGAGCACCGGGAGGAGGAGGGAGGAGGAACAGGGAGAGGAGGAGCA-CGGCGAGC-CCGGGGAGAAGGCGAGGAGGTACCACAAGGTGAGGGC-CAGGTTCGGGA-GGGTCGGTGATCGTGATCCCCGCGTCGCACCCGGCGACGATCGTCGCCAGCGAGGGCGAGAGCCTCGCCGTCGTCTGCTTCTTCGTCGGCGCCAACCACGACGAGAAGGTGTTCCTCGCCGGCAGGAACAGCCCGCTGAGGCAGCTCGACGACCCGGCCGCGGCAGCGTCTCCGTACGCCGAGCAGCTGTGTGATCGA-GAGGAATAAGTTGGTACACGTAGGCCACGC-GTCGTGTACAGTACAAAATACGGTACCGTACTGCGTGTACGTGTAGCCAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTA-TGTATCGATGGAACTGTATGAACCCAAAAAAGGAGTGCTATATTACTAATCAGAGTACGTTCTGCTACTAAAAAAAAAAA]
[+] EMBL BI799448 [GCCACCAAGTCTTCCCGTCGTCCTGCAGGGCCACCGGGCATACCTTTTGAGGATGCGCGTCCCCACACGGTTCCGCGCGG C TCGT CGGAGCCC GGGA GCG CGAGCGCGAGCA CGGGAGGAGGAGGGAGGAGGAACAGGGAGAGGAGGAGCA CGGCGAGCGCCGGGGAGAAGGCGAGGAGGTACCACAAGGTGAGGGCGCAGGTTCGGGAGGGGTCGGTGATCGTGATCCCCGCGTCGCACCCGGCGACGATCGTCGCCAGCGAGGGCGAGAGCCTCGCCGTCGTCTGCTTCTTCGTCGGCGCCAACCACGACGAGAAGGTGTTCCTCGCCGGCAGGAACAGCCCGCTGAGGCAGCTCGACGACCCGGCCGCGGCAGCGTCTCCGTACGCCGAGCAGCTGTGTGATCGACGAGGAATAAGTTGGTACACGTAGGCCACGC GTCGTGTACAGTACAAAATACGGTACCGTACTGCGTGTACGTGTAGCCAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTA TGTATCGATGGAACTGTATGAACCCAAAAAA ]
[+] EMBL BI798387 [ ttccccggCCGC CGGTCTTCGTTCCGGAGCCCCCCCGGGGAGGCGCCGAGCGCGAGCACCGGGAGGAGGAGGGAGGAGGAACAGGGAGAGGAGGAGCACCGGCGAGC CCGGGGAGAAGGCGAGGAGGTACCACAAGGTGAGGGC CAGGTTCGGGA GGGTCGGTGATCGTGATCCCCGCGTCGCACCCGGCGACGATCGTCGCCAGCGAGGGCGAGAGCCTCGCCGTCGTCTGCTTCTTCGTCGGCGCCAACCACGACGAGAAGGTGTTCCTCGCCGGCAGGAACAGCCCGCTGAGGCAGCTCGACGACCCGGCCGCGGCAGCGTCTCCGTACGCCGAGCAGCTGTGTGATCGA GAGGAATAAGTTGGTACACGTAGGCCACGC GTCGTGTACAGTAC AAATACGGTACCGTACTGCGTGTACGTGTAGCCAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTACTGTATCGATGGAACTGTATGAACCCAAAAAA ]
[+] EMBL BI798840 [ A GC CCGAGCGCGAGCACGGGAAGGAGGAGGGAGGAGGAACAGGGAGAGGAGGAGCA CGGCGAG CCGGGGAGAA GCGAGGAGGTACCACAAGTTGAGGGC CA GTTCGGGA GGGTCGGTGATCGTGATCCCCGCGTCGCACCC GCGACGATCGTCGCCAGCGAGGGCGAGAGCCTCGCCGTCGTCTGCTTCTTCGTCGGCGCCAACCACGACGAGAAGGTGTTCCTCGCCGGCAGGAACAGCCCGCTGAGGCAGCTCGACGACCCGGCCGCGGCAGCGTCTCCGTACGCCGAGCAGCTGTGTGATCGA GAGGAATAAGTTGGTACACGTAGGCCACGC GTCGTGTACAGTAC AAATACGGTACCGTACTGCGTGTACGTGTAGCCAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTA TGTATCGATGGAACTGTATGAACCCAAAAAA ]
[+] EMBL BI799245 [ cacgcgtCCAGCC CGGC GCG CGTACGCCGAGCAGCTGTGTGATCGA GAGGAATAAGTTGGTACACGTAGGCCACGCAGTCGTGTACAGTACAAAATACGGTACCGTACTGCGTGTACGTGTAGCCAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTA TGTATCGATGGAACTGTATGAACCCAAGTACGGAGTGCTATATTACTAATCAGAGTACGTTCTGCTACTAAAAAAAAAAA]
consensusID : consensus_16536#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 541 fasta sequence
[GGCTCGGGTATCTGAGTGGGAAATCAAGCCGTCCAGCCTCACCGGCAAGAGTACCGTACTTCTCCAACAACCACGGCAAGCTGTTCGAGCTCACCGGCGACGAGTGCCGCCACCTCAAGAAGCTCGACCTGCAGATCGGCCTCGCCAACATCACCCGCGGCTCGATGATTGCGCCGAACTACAACACCCGCGCCACCAAGCTCGCCGTCGTCCTGCAGGGCAGCGGCTACTTTGAGATGGCGATGCCCACACGATGTCCGGCGGCGGCTCGTCGGAGCGCCGGGAGCGCGAGCGCGAGCACGGGAGGAGGAGGGAGGAGGAACCGGGAGAGGACGGAAGCACGGCGACCACCGGGAGAACGCCAAGGAGGTCCACCAACGTGACAGGCGCCAGTCCGGGAGGGGTCCGCTGATCATGATCCCCCCGTTGCACCCCGCGACCAATCGTCCCCACCGAAGGCGAAACCCTCCCGTAATTTGCTTCTTCGTGGCGCCACCCGACAAAGGTGTCCCGCCGCAGAACGCCCGTGAAGCCCTCAAAC]
[+] EMBL BQ172731 [GGCTCGGGTATCTGAGTGGGAAATCAAGCCGTCCAGCCTCACCGGCAAGAGTACCGTACTTCTCCAACAACCACGGCAAGCTGTTCGAGCTCACCGGCGACGAGTGCCGCCACCTCAAGAAGCTCGACCTGCAGATCGGCCTCGCCAACATCACCCGCGGCTCGATGATTGCGCCGAACTACAACACCCGCGCCACCAAGCTCGCCGTCGTCCTGCAGGGCAGCGGCTACTTTGAGATGGCGATGCCCACACGATGTCCGGCGGCGGCTCGTCGGAGCGCCGGGAGCGCGAGCGCGAGCACGGGAGGAGGAGGGAGGAGGAACCGGGAGAGGACGGAAGCACGGCGACCACCGGGAGAACGCCAAGGAGGTCCACCAACGTGACAGGCGCCAGTCCGGGAGGGGTCCGCTGATCATGATCCCCCCGTTGCACCCCGCGACCAATCGTCCCCACCGAAGGCGAAACCCTCCCGTAATTTGCTTCTTCGTGGCGCCACCCGACAAAGGTGTCCCGCCGCAGAACGCCCGTGAAGCCCTCAAAC]
consensusID : consensus_16536#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 430 fasta sequence
[AAGCTCTGTTCGCGCTCCCGGCGAGGGAGCCGGACCGCGTGCTCCCGCCCACCGGACCAGATCTTCTGCCCGCCCGCACGCCAGGCAGCGTCTCCGACATGTAAGCGCCCGCGCCGGCGCGCCCAGCGCGACGCGACGCGACGACGTCCCCTGCACCCGGCGCGCGTACGCCGACAGCTGTGTGATCGAGAGGAAGGAGTTGGTACACGTAGCCACGCGTCGTGTACAAGTACAAATACGTGGGCTACTGGGTGTACGTGTAGCCAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATAACGTATGCGTATTAGCTGAGGTATGTATCGATGGAACTGTGGGAACCCAAGTACGGAGTGCTATATTACTAAATTTGCCAGGAAGTTAACCGTTTTCCTTGCCCTTTTTAAAACCTTAAAAAAA]
[+] EMBL BI801835 [AAGCTCTGTTCGCGCTCCCGGCGAGGGAGCCGGACCGCGTGCTCCCGCCCACCGGACCAGATCTTCTGCCCGCCCGCACGCCAGGCAGCGTCTCCGACATGTAAGCGCCCGCGCCGGCGCGCCCAGCGCGACGCGACGCGACGACGTCCCCTGCACCCGGCGCGCGTACGCCGACAGCTGTGTGATCGAGAGGAAGGAGTTGGTACACGTAGCCACGCGTCGTGTACAAGTACAAATACGTGGGCTACTGGGTGTACGTGTAGCCAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATAACGTATGCGTATTAGCTGAGGTATGTATCGATGGAACTGTGGGAACCCAAGTACGGAGTGCTATATTACTAAATTTGCCAGGAAGTTAACCGTTTTCCTTGCCCTTTTTAAAACCTTAAAAAAA]
consensusID : consensus_16536#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 401 fasta sequence
[GTGTTCGGCGGTCCGCGGCGAGGGAAGCGGACCGCGTGCTCGCCGCGCAGCCGGAGCAGATCTTGTGCGCGGCCCGCANNGCCGCGGCAGCNTCTCCGACATGTAACGCGACGCGACGACGTCCCCTGCACCCGGCGCGCGTACGCCGAGCAGCTGTGTGATCGAGAGGAATAAGTTGGTACACGTAGGCCACGCGTCGTGTNCAGTACAAAATACGGTACCGTATGCGTGTACGTGTAGCCAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTATGTATCGATGGAACTGTATGAACCCAAGTACGGAGTGCTATATTACTAATGCAGAGTACGTTCTGCTACTAATTAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU163766 [GTGTTCGGCGGTCCGCGGCGAGGGAAGCGGACCGCGTGCTCGCCGCGCAGCCGGAGCAGATCTTGTGCGCGGCCCGCANNGCCGCGGCAGCNTCTCCGACATGTAACGCGACGCGACGACGTCCCCTGCACCCGGCGCGCGTACGCCGAGCAGCTGTGTGATCGAGAGGAATAAGTTGGTACACGTAGGCCACGCGTCGTGTNCAGTACAAAATACGGTACCGTATGCGTGTACGTGTAGCCAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTATGTATCGATGGAACTGTATGAACCCAAGTACGGAGTGCTATATTACTAATGCAGAGTACGTTCTGCTACTAATTAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_16536#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 301 fasta sequence
[TTGTTAATGCAGCAGTCCAGTCGCACAGGCGCGTCGCCGCGCGACGCGACGCTGACGACGTCCCCTGCACCCGGCGCGCGTACGCCGAGCAGCTGTGTGATCGAGAGGAATAAGTTGGTACACGTAGGCCACGCGTCGTGTACAGTACAATAATACGGTACCGTACTGCGTGTACGTGTAGCCAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTATGTATCGATGGAACTGTACTGAACCCAAGTACGGAGTGCTATATTACTAAAAA]
[+] EMBL BI798517 [TTGTTAATGCAGCAGTCCAGTCGCACAGGCGCGTCGCCGCGCGACGCGACGCTGACGACGTCCCCTGCACCCGGCGCGCGTACGCCGAGCAGCTGTGTGATCGAGAGGAATAAGTTGGTACACGTAGGCCACGCGTCGTGTACAGTACAATAATACGGTACCGTACTGCGTGTACGTGTAGCCAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTAGCTGAGGTATGTATCGATGGAACTGTACTGAACCCAAGTACGGAGTGCTATATTACTAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_16536#1 ------------------------------------------------------------
consensus_16536#5 ------------------------------------------------------------
consensus_16536#4 ------------------------------------------------------------
consensus_16536#6 ------------------------------------------------------------
consensus_16536#2 ------------------------------------------------------------
consensus_16536#0 GCCACCGCTAGGATCGATCGAACACCATGGCGAAGAAGAAGACGTCGTCGTCCATGGCGA 60
consensus_16536#3 ------------------------------------------------------------
consensus_16536#1 ------------------------------------------------------------
consensus_16536#5 ------------------------------------------------------------
consensus_16536#4 ------------------------------------------------------------
consensus_16536#6 ------------------------------------------------------------
consensus_16536#2 ------------------------------------------------------------
consensus_16536#0 GATCGCAGCTGGCGGCGCTGCTCATCTCCCTGTGCTTCCTCTCCCTCGCGTCGAACGCCG 120
consensus_16536#3 ------------------------------------------------------------
consensus_16536#1 ------------------------------------------------------------
consensus_16536#5 ------------------------------------------------------------
consensus_16536#4 ------------------------------------------------------------
consensus_16536#6 ------------------------------------------------------------
consensus_16536#2 ------------------------------------------------------------
consensus_16536#0 TTGGGTGGAGCAGGAGAGGGGAGCGGGAGGAGGAGGACGAACGGCGGCGCCACGGCGGCG 180
consensus_16536#3 ------------------------------------------------------------
consensus_16536#1 ------------------------------------------------------------
consensus_16536#5 ------------------------------------------------------------
consensus_16536#4 ------------------------------------------------------------
consensus_16536#6 ------------------------------------------------------------
consensus_16536#2 ------------------------------------------------------------
consensus_16536#0 AGGGCGGGAGGCCGTACCACTTAGGGGAGGAGAGCTTCCGGCACTGGACGAGGACGCGGC 240
consensus_16536#3 ------------------------------------------------------------
consensus_16536#1 ------------------------------------------------------------
consensus_16536#5 ------------------------------------------------------------
consensus_16536#4 ------------------------------------------------------------
consensus_16536#6 ------------------------------------------------------------
consensus_16536#2 ------------------------------------------------------------
consensus_16536#0 ACGGGCGGTTCAGCGTGCTGGAGAGGTTCCCCGACGAGCAGGTGGTGGGCGCCGCCGTCG 300
consensus_16536#3 ------------------------------------------------------------
consensus_16536#1 ------------------------------------------------------------
consensus_16536#5 ------------------------------------------------------------
consensus_16536#4 ------------------------------------------------------------
consensus_16536#6 ------------------------------------------------------------
consensus_16536#2 ------------------------------------------------------------
consensus_16536#0 GGGGGTACCGCGTCGCCGTGCTGGAGGCGGCGCCGCGCGCGTTCCTGCAGCCCAGCCACT 360
consensus_16536#3 ------------------------------------------------------------
consensus_16536#1 ------------------------------------------------------------
consensus_16536#5 ------------------------------------------------------------
consensus_16536#4 ------------------------------------------------------------
consensus_16536#6 ------------------------------------------------------------
consensus_16536#2 ------------------------------------------------------------
consensus_16536#0 ACGACGCCGACGAGGTGTTCTACGTCAAGGAGGGCGAGGGCGTGATCGTGCTGCTGCGTG 420
consensus_16536#3 ------------------------------------------------------------
consensus_16536#1 ------------------------------------------------------------
consensus_16536#5 ------------------------------------------------------------
consensus_16536#4 ------------------------------------------------------------
consensus_16536#6 ------------------------------------------------------------
consensus_16536#2 ------------------------------------------------------------
consensus_16536#0 AGGGGAGGAGGGAGTCGTTCTGCGTGAGGGAGGGCGACGCCATGGTCATCCCCGCCGGCG 480
consensus_16536#3 ------------------------------------------------------------
consensus_16536#1 ------------------------------------------------------------
consensus_16536#5 ------------------------------------------------------------
consensus_16536#4 ------------------------------------------------------------
consensus_16536#6 ------------------------------------------------------------
consensus_16536#2 ------------------------------------------------------------
consensus_16536#0 CCATCGTCTACTCCGCCAACACACACAGCTCCAAGTGGTTCCGCGTCGTCATGCTGCTCA 540
consensus_16536#3 ------------------------------------------------------------
consensus_16536#1 ------------------------------------------------------------
consensus_16536#5 ------------------------------------------------------------
consensus_16536#4 ------------------------------------------------------------
consensus_16536#6 ------------------------------------------------------------
consensus_16536#2 ------------------------------------------------------------
consensus_16536#0 ACCCCGTCTCCACTCCCGGCCACTTCGAGGAATACTTCCCCGTCGGCGGCGACCGGCCGG 600
consensus_16536#3 ------------------------------------------------------------
consensus_16536#1 ------------------------------------------------------------
consensus_16536#5 ------------------------------------------------------------
consensus_16536#4 ------------------------------------------------------------
consensus_16536#6 ------------------------------------------------------------
consensus_16536#2 ------------------------------------------------------------
consensus_16536#0 AGTCGTTCTTCAGCGCGTTTAGCGACGACGTTCTGCAGGCGGCGTTCAACACTCGCCGGG 660
consensus_16536#3 ------------------------------------------------------------
consensus_16536#1 ------------------------------------------------------------
consensus_16536#5 ------------------------------------------------------------
consensus_16536#4 ------------------------------------------------------------
consensus_16536#6 ------------------------------------------------------------
consensus_16536#2 ------------------------------------------------------------
consensus_16536#0 AAGAATTGGAGAAGGTGTTCGAGAGGCAGCGGGAGGGCGGCGAGATCACGACGGCGCCGG 720
consensus_16536#3 ------------------------------------------------------------
consensus_16536#1 ------------------------------------------------------------
consensus_16536#5 ------------------------------------------------------------
consensus_16536#4 ------------------------------------------------------------
consensus_16536#6 ------------------------------------------------------------
consensus_16536#2 ------------------------------------------------------------
consensus_16536#0 AGGAGCAGATACGGGAGCTGAGCAAGTCGTGCTCCCGCGGCGGCGGCGGCGGCTCGGGTT 780
consensus_16536#3 ------------------------------------------------------------
consensus_16536#1 ------------------------------------------------------------
consensus_16536#5 ------------------------------------------------------------
consensus_16536#4 ------------------------------------------------------------
consensus_16536#6 ------------------------------------------------------------
consensus_16536#2 ------------------------------------------------------------
consensus_16536#0 CTGAGTGGGAAATCAAGCCGTCCAGCCTCACCGGCAAGAGTCCGTACTTCTCCAACAACC 840
consensus_16536#3 ------------------------------------------------------------
consensus_16536#1 ------------------------------------------------------------
consensus_16536#5 ------------------------------------------------------------
consensus_16536#4 ------------------------------------------------------------
consensus_16536#6 ------------------------------------------------------------
consensus_16536#2 ------------------------------------------------------------
consensus_16536#0 ACGGCAAGCTGTTCGAGCTCACCGGCGACGAGTGCCGCCACCTCAAGAAGCTCGACCTGC 900
consensus_16536#3 ------------------------------------------------------------
consensus_16536#1 ------------------------------------------------------------
consensus_16536#5 ------------------------------------------------------------
consensus_16536#4 ------------------------------------------------------------
consensus_16536#6 ------------------------------------------------------------
consensus_16536#2 ------------------------------------------------------------
consensus_16536#0 AGATCGGCCTCGCCAACATCACCCGCGGCTCGATGATTGCGCCGAACTACAACACCCGCG 960
consensus_16536#3 ------------------------------------------------------------
consensus_16536#1 ------------------------------------------------------------
consensus_16536#5 ------------------------------------------------------------
consensus_16536#4 ------------------------------------------------------------
consensus_16536#6 ------------------------------------------------------------
consensus_16536#2 ------------------------------------------------------------
consensus_16536#0 CCACCAAGCTCGCCGTCGTCCTGCAGGGCAGCGGCTACTTTGAGATGGCGTGCCCACACG 1020
consensus_16536#3 ------------------------------------------------------------
consensus_16536#1 ------------------------------------------------------------
consensus_16536#5 ------------------------------------------------------------
consensus_16536#4 ------------------------------------------------------------
consensus_16536#6 ------------------------------------------------------------
consensus_16536#2 ------------------------------------------------------------
consensus_16536#0 TGTCCGGCGGCGGCTCGTCGGAGCGCCGGGAGCGCGAGCGCGAGCACGGGAGGAGGAGGG 1080
consensus_16536#3 ------------------------------------------------------------
consensus_16536#1 ---------------------------------------------------------AGT 3
consensus_16536#5 ------------------------------------------------------------
consensus_16536#4 ------------------------------------------------------------
consensus_16536#6 ------------------------------------------------------------
consensus_16536#2 -------------------------------------------GCCACCAAGTCTTCCCG 17
consensus_16536#0 AGGAGGAACAGGGAGAGGAGGAGCACGGCGAGCGCGGGGAGAAGGCGAGGAGGTACCACA 1140
consensus_16536#3 ------------------------------------------------------------
consensus_16536#1 CACCACAAGGTGAGGGCCAGTTCGGAGGGTCGGTGATCGTGATCCCCGCGTCGCACCCGC 63
consensus_16536#5 ------------------------------------------------------------
consensus_16536#4 ------------------------------------------------------------
consensus_16536#6 ------------------------------------------------------------
consensus_16536#2 TCGTCCTGCAGGGCCACCGGGCATACCTTTTGAGGATGCGCGTCCCCACACGGTTCCGCG 77
consensus_16536#0 AGGTGAGGGCGCAGGTTCGGGAGGAGTCGGTGATCGTGATCCCCGCGTCGCACCCGGCGA 1200
consensus_16536#3 ------------------------------------------------------------
consensus_16536#1 GACGATCTTCGCCAGCGAGGGCGAGACCTCCCGTCGTCTGCTTCTTCGTCGGCGCCAACC 123
consensus_16536#5 ------------------------------------------------------------
consensus_16536#4 ------------------------------------------------------------
consensus_16536#6 ------------------------------------------------------------
consensus_16536#2 CGGCTCGTCGGAGCCCGGGAGCGCCGAGCGCGAGCACCGGGAGGAGGAGGGAGGAGGAAC 137
consensus_16536#0 CGATCGTCGCCAGCGAGGGCGAGAGCCTCGCCGTCGTCTGCTTCTTCGTCGGCGCCAACC 1260
consensus_16536#3 -----------------------------------GGCTCGGGTATCTGAGTGGGAAATC 25
consensus_16536#1 ACGACGAGAAGGTGTTCCTCGCCGGCAGGAACAGCCCGCTGAGGCAGCTCGACGACCCGG 183
consensus_16536#5 ------------------------------------------------------------
consensus_16536#4 ------------------------------------------------------------
consensus_16536#6 ------------------------------------------------------------
consensus_16536#2 AGGGAGAGGAGGAGCACGGCGAGCCCGGGGAGAAGGCGAGGAGGTACCACAAGGTGAGGG 197
consensus_16536#0 ACGACGAGAAGGTGTTCCTCGCCGGCAGGAACAGCCCGCTGAGGCAGCTCGACGACCCGG 1320
consensus_16536#3 AAGCCGTCCAGCCTCACCGGCAAGAGTACCGTACTTCTCCAACAACCACGGCAAGCTGTT 85
consensus_16536#1 CCAAGAAGCTCGTGTTCGGCGGCTCCGCGGCGAGGGAGGCGGACCGCG--TGCTC-CCGC 240
consensus_16536#5 -----------GTGTTCGGCGG-TCCGCGGCGAGGGAAGCGGACCGCG--TGCTCGCCGC 46
consensus_16536#4 ---------AAGCTCTGTTCGCGCTCCCGGCGAGGGAGCCGGACCGCG--TGCTC-CCGC 48
consensus_16536#6 ------------------------------------------------------------
consensus_16536#2 CCAGGTTCGGGAGGGTCGGTGATCGTGATCCCCGCGTCGCACCCGGCGA-CGATCGTCGC 256
consensus_16536#0 CCAAGAAGCTCGTGTTCGGCGGCTCCGCGGCGAGGGAAGCGGACCGCG--TGCTCGCCGC 1378
consensus_16536#3 CGAGCTCACCGGCGACGAGTGCCGCCACCTCAAGAAGCTCGACCTGCAGATCGGCCTCGC 145
consensus_16536#1 GCAGCCGGAGCAGATCTTGCTGCGCGGCCCGCACGGCCGCGGCAGCGTCTCCGACATGTA 300
consensus_16536#5 GCAGCCGGAGCAGATCTTG-TGCGCGGCCCGCANNGCCGCGGCAGCNTCTCCGACATGTA 105
consensus_16536#4 CCA-CCGGACCAGATCTTC-TGC-CCGCCCGCACGCCAG--GCAGCGTCTCCGACATGTA 103
consensus_16536#6 -----------------------------------------------TTGTTAATGCAGC 13
consensus_16536#2 CAGCGAGGGCGAGAGCCTCGCCGTCGTCTGCTTCTTCGTCGGCGCCAACCACGACGAGAA 316
consensus_16536#0 GCAGCCGGAGCAGATCTTGCTGCGCGGCCCGCACGGCCGCGGCAGCGTCTCCGACATGTA 1438
consensus_16536#3 CAACATCACCCGCGGCTCGATGATTGCGCCGAACTACAACACCCGCGCCACCAAGCTCGC 205
*
consensus_16536#1 AGCGC-GCCGCGCCGGCGCGCG-CCGCGCGACGCGACGC-GACGACGTCCC--CTGCACC 355
consensus_16536#5 A------------------------------CGCGACGC-GACGACGTCCC--CTGCACC 132
consensus_16536#4 AGCGC--CCGCGCCGGCGCGCC-CAGCGCGACGCGACGC-GACGACGTCCC--CTGCACC 157
consensus_16536#6 AGTCCAGTCGCACAGGCGCGTCGCCGCGCGACGCGACGCTGACGACGTCCC--CTGCACC 71
consensus_16536#2 GGTGT-TCCTCGCCGGCAGGAA-CAGCCCGCTGAGGCAG-CTCGACGACCCGGCCGCGGC 373
consensus_16536#0 A------------------------------CGCGACGC-GACGACGTCCC--CTGCACC 1465
consensus_16536#3 CGTCGTCCTGCAGGGCAGCGGC----TACTTTGAGATGG---CGATGCCCACACGATGTC 258
* * *** * ** * *
consensus_16536#1 CG-GCGCGCGTACGCCGAGCAGCTGTGTGATCGAGAGGAATAAGTTGGTACACGTAGGCC 414
consensus_16536#5 CG-GCGCGCGTACGCCGAGCAGCTGTGTGATCGAGAGGAATAAGTTGGTACACGTAGGCC 191
consensus_16536#4 CG-GCGCGCGTACGCCGA-CAGCTGTGTGATCGAGAGGAAGGAGTTGGTACACGTAG-CC 214
consensus_16536#6 CG-GCGCGCGTACGCCGAGCAGCTGTGTGATCGAGAGGAATAAGTTGGTACACGTAGGCC 130
consensus_16536#2 AGCGTCTCCGTACGCCGAGCAGCTGTGTGATCGAGAGGAATAAGTTGGTACACGTAGGCC 433
consensus_16536#0 CG-GCGCGCGTACGCCGAGCAGCTGTGTGATCGAGAGGAATAAGTTGGTACACGTAGGCC 1524
consensus_16536#3 CG-GCGGCGGCTCGTCGG--AGCGCCGGGAGCGCGAGCGCGAGCACGGGAGGAGGAGGGA 315
* * * ** ** *** * ** ** *** ** * * **
consensus_16536#1 ACGCGTCGTGTACA-GTACAA-A-TACGGTACCGTACTGCGTGTACGTGTAG-------- 463
consensus_16536#5 ACGCGTCGTGTNCA-GTACAA-AATACGGTACCGTA-TGCGTGTACGTGTAG-------- 240
consensus_16536#4 ACGCGTCGTGTACAAGTACAA--ATACGTGGGC-TACTGGGTGTACGTGTAG-------- 263
consensus_16536#6 ACGCGTCGTGTACA-GTACAATAATACGGTACCGTACTGCGTGTACGTGTAG-------- 181
consensus_16536#2 ACGCGTCGTGTACA-GTACAA-AATACGGTACCGTACTGCGTGTACGTGTAG-------- 483
consensus_16536#0 ACGCGTCGTGTACA-GTACAA-AATACGGTACCGTACTGCGTGTACGTGTAG-------- 1574
consensus_16536#3 GGAGGAACCGGGAGAGGACGGAAGCACGGCGAC-CACCGGGAGAACGCCAAGGAGGTCCA 374
* * * ** *** * * * * * *** **
consensus_16536#1 CCAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTA-G 522
consensus_16536#5 CCAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTA-G 299
consensus_16536#4 CCAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTAT-AACGTATGCGTATTA-G 321
consensus_16536#6 CCAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTA-G 240
consensus_16536#2 CCAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTA-G 542
consensus_16536#0 CCAAGGGGACGTACGCTTTATGTATATATCGTATCTATGTATTAACGTATGCGTATTA-G 1633
consensus_16536#3 CCAACGTGACAGGCGCCA---GTCCGGGAGGGGTCCGCTGATCATGATCCCCCCGTTGCA 431
**** * *** *** ** * ** ** * * * **
consensus_16536#1 CTGAGGTATGTATCGATGGAACTGTAT---GAACCCAAGTACGGAGTGCTATATTACTAA 579
consensus_16536#5 CTGAGGTATGTATCGATGGAACTGTAT---GAACCCAAGTACGGAGTGCTATATTACTAA 356
consensus_16536#4 CTGAGGTATGTATCGATGGAACTGTGG---GAACCCAAGTACGGAGTGCTATATTACTAA 378
consensus_16536#6 CTGAGGTATGTATCGATGGAACTGTACT--GAACCCAAGTACGGAGTGCTATATTACTAA 298
consensus_16536#2 CTGAGGTATGTATCGATGGAACTGTAT---GAACCCAAAAAAGGAGTGCTATATTACTAA 599
consensus_16536#0 CTGAGGTATGTATCGATGGAACTGTAT---GAACCCAAGTACGGAGTGCTATATTACTAA 1690
consensus_16536#3 CCCCGCGACCAATCGTCCCCACCGAAGGCGAAACCCTCCCGTAATTTGCTTCTTCGTGGC 491
* * * **** ** * ***** **** *
consensus_16536#1 ------TGCAGAGTACGTTCTGCTACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 633
consensus_16536#5 ------TGCAGAGTACGTTCTGCTACTAATTAAAAAAAAAAAAAAAAAAAA--------- 401
consensus_16536#4 ATTTGCCAGGAAGTTAACCGTTTTCCTTGCCCTTTTTAAAACCTTAAAAAAA-------- 430
consensus_16536#6 AAA--------------------------------------------------------- 301
consensus_16536#2 -------TCAGAGTACGTTCTGCTACTAAAAAAAAAAA---------------------- 630
consensus_16536#0 ------TGCAGAGTACGTTCTGCTACTAAAAAAAAAGCGTCGTTTGGGCAAGTTTGATTT 1744
consensus_16536#3 GCCACCCGACAAAGGTGTCCCGCCGCAGAACGCCCGTGAAGCCCTCAAAC---------- 541
consensus_16536#1 A-------------------------------------------------- 634
consensus_16536#5 ---------------------------------------------------
consensus_16536#4 ---------------------------------------------------
consensus_16536#6 ---------------------------------------------------
consensus_16536#2 ---------------------------------------------------
consensus_16536#0 GTAATTAAATTACTCATAAGCGGAGTCGTACATAATCGCGAACCAAAAAAA 1795
consensus_16536#3 ---------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||