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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16563#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1012 fasta sequence
[TTTTTTATTGAACAGTCATGATCAATCATATCTGAAATCACTTGATCTTATTGTAATTCCTATACTTCCTTTGACACAATGAATTCAGGCTATATGGAAAAACTTACACGGATGTTGATGTGATTGTCCTAAATTTTATCTGATTTATATTTTTTCAGAGTGTGCTCCCTTCTAACCACAACTTGGAACAAATTCAGTGCAAACACAAACCTTACGCTACATACAATTTCAACTTGTCGATATTACACGTTGATAATAATGTCTTAGGTTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGACAAAACAGTGCCTACCCAACCAGCCAACCTCTACTTACAATATAATAATATATAAAGACAACAAATACACTACACAAAAGAAGGAATATATTGCAAAAATTCACTATTGAGCATCCCATAGGTCTAGATATTACAACCAGATACTTTGCCTACTTCTGCAAATGAAGGATGGGGGAGGGTACGAGATCTAATCCTCGAGCGCCTTCAGGATGTCTTTCTCAAAAGACAAGGGACTGGTCGCAGTCGAGTATCTGTTAATGACTTTGCCATTCTTATCAATAAGAAATTTGGTAAAGTTCCACTTGATTCTAGATCCAAACAGGCC-GGGTTGCTGNTTTTNAAAANTTTGTAAAGTGGTGCAGCATCAGGACCATTTACACGCACCTGCAGATACAAAATTTGAAAAATAACTAGCGGCTTCCAACAAAATAAAGTTAAATAAATCCACATGTCGTAATTGTTATGGCTATGTAATGATTGCAAGAAATATGGGATTCAAATAAATTCTTACAAAAAGATAATTAGATAGTATTGCTTTGCATTAGGTTATCATCAACATTAGAAGACGTAATGTGGCTAGTCTCTAGATTCTTTTAACATATTTTCAAAAGTTATTTTTAATAAAGAAAAGGTAAAATATCTTGTGGCAAAGATAATGTAGAACTTTTTCACCTTCATGAAAATAGTGGAAAAGGCTCT]
[+] EMBL CF308603 [TTTTTTATTGAACAGTCATGATCAATCATATCTGAAATCACTTGATCTTATTGTAATTCCTATACTTCCTTTGACACAATGAATTCAGGCTATATGGAAAAACTTACACGGATGTTGATGTGATTGTCCTAAATTTTATCTGATTTATATTTTTTCAGAGTGTGCTCCCTTCTAACCACAACTTGGAACAAATTCAGTGCAAACACAAACCTTACGCTACATACAATTTCAACTTGTCGATATTACACGTTGATAATAATGTCTTAGGTTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGACAAAACAGTGCCTACCCAACCAGCCAACCTCTACTTACAATATAATAATATATAAAGACAACAAATACACTACACAAAAGAAGGAATATATTGCAAAAATTCACTATTGAGCATCCCATAGGTCTAGATATTACAACCAGATACTTTGCCTACTTCTGCAAATGAAGGATGGGGGAGGGTACGAGATCTAATCCTCGAGCGCCTTCAGGATGTCTTTCTCAAAAGACAAGGGACTGGTCGCAGTCGAGTATCTGTTAATGACTTT ]
[+] EMBL D42926 [ CACAAACCTTACGNTACATACAATTTCAACTTGTCGATATTACACGTTGATAATAATGTCTTAGGTTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGACAAAACAGTGCCTACCCAACCAGCCAACCTCTACTTACAATATAATAATATATAANGACAACAAATACACTACACANAAGANGGNNTATATTGCAAAANTTCACTATTGAGCATCCCATAGGTCTAGATATTACAACCAGATACTTTGCCTACTTCTGCAAATGNAGGNTGGGGGAGGGTACGNGATCTAATCCTCGAGCGCCTTCAGGATGTCTTTCTCAAAAGGCAAGGGCCTGGTCGCAGTCGNGTATCTGTTAATGCCTTTGCCATTCTTATCANTAAGGNATTTGGGTAAGTTCCACTTGNTTCTAGGTCCCAACAGGCC GGGTTGCTGNTTTTNAAAANT ]
[-] EMBL AU198231 [ tttttttttTTACGCTACATACAATTTCAACTTGTCGATATTACACGTTGATAATAATGTCTTAGGTTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGACAAAACAGTGCCTACCCAACCAGCCAACCTCTACTTACAATATAATAATATATAAAGACAACAAATACACTACACAAAAGAAGGAATATATTGCAAAAATTCACTATTGAGCATCCCATAGGTCTAGATATTACAACCAGATACTTTGCCTACTTCTGCAAATGAAGGATGGGGGAGGGTACGAGATCTAATCCTCGAGCGCCTTCAGGATGTCTTTCTCAAAAGACAAGGGACTGGTCGCAGTCGAGTATCTGTTAATGACTTTGCCATTCTTATCAATAAGAAATTTGGTAAAGTTCCACTTGATTCTAGATCCAAAC ]
[-] EMBL BM419280 [ tttttttttTACAATTTCAACTTGTCGATATTACACGTTGATAATAATGTCTTAGGTTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGACAAAACAGTGCCTACCCAACCAGCCAACCTCTACTTACAATATAATAATATATGAAGACAACAAATACACTACACAAAAGAAGGAATATATTGCAAAAATTCACTA TGAGCATCCCATAGGTCTAGATATTACAACCAGATACTTNGCCTACTTCTGCAAATGAAGGATGGGGGAGGGTACGAGATCTAATCCTCGAGCGCCTTCAGGATGTCTTTCTCAAAAGACAAGGGACTGGTCGCAGTCGAGTATCTGTTAATGACTTTGCCATTCTTATCA ]
[+] EMBL CB675176 [ CGNTGATAATAATGTCTTCTTTTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGACAAAACAGTGCCTACCCAACCAGCCAACCTCTACTTACAATATAATAATATATAAAGACAACAAATACACTACACAAAAGAAGGAATATATTGCAAAAATTCACTATTGAGCATCCCATAGGTCTAGATATTACAACCAGATACTTTGCCTACTTCTGCAAATGAAGGATGGGGGAGGGTACGAGATCTAATCCTCGAGCGCCTTCAGGATGTCTTTCTCAAAAGACAAGGGACTGGTCGCAGTCGAGTATCTGTTAATGACTTTGCCATTCTTATCAATAAGAAATTTGGTAAAGTTCCACTTGATTCTAGATCCAAACAAGCCAGGCTTGCTAGCTTTCAAAAATTTGTAAAGTGGTGCAGCATCAGGACCATTTACACGCACCTGCAGATACAAAATTTGAAAAATAACTAGCGGCTTCCAACAAAATAAAGTTAAATAAATCCACATGTCGTAATTGTTATGGCTATGTAATGATTGCAAGAAATATGGGATTCAAATAAATTCTTACAAAAAGATAATTAGATAGTATTGCTTTGCATTAGGTTATCATCAACATTAGAAGACGTAATGTGGCTAGTCTCTAGATTCTTTTAACATATTTTCAAAAGTTATTTTTAATAAAGAAAAGGTAAAATATCTTGTGGCAAAGATAATGTAGAACTTTTTCACCTTCATGAAAATAGTGGAAAAGGCTCT]
consensusID : consensus_16563#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 23 consensus length = 934 fasta sequence
[CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAAACACAAACCTTACGCTACATACAATTTCAACTTGTCGATATTACACGTTGAT-AATAATGTCTTA-GGTTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGACAAAACAGTGCCTACCCAACCAGC-CAACCTCTACTTACAATATAATAATATATAAAGACAACAAATACACTACACAAAAGAAGGAATATATTGCAAAAATTCACTAT-TGAGCATCCCATAGGTCTAGATATTACAACCAGATACTT-TGCCTACTTCTGCAAATGAAGGATGGGGGAGGGTACGAGATCTAATCCTC-GAGC-GCCTTCAGGATGTCTTTCTCAAAAGACAAGGGACTGGTCGCAGTCGAGTATCTGTTAATGACTTTGCCATTCTTATCAATAAGAAATTTGGT-AAAGTT-CCACTTGATTCTAGATCCAAACAAGCCAGGCTT-GCTAGCTTTC-AAAAATTTGTAAAGTGGTG-CAGCATCAGGA-CC-ATTTACACGC-ACCTTCTG-AAAAACGGGATATTCAGCTTT-AAATCTTGTGCAAGCAAAA-TCCTTTATTTGCTGGTCAGATCCTGGCTCTTGTC-GCAAGAACT-GATTGCA-GGGAAATGCTAGAATCTCAAAATCTTTGTCCCTGTGTTTCT-GATA-GAGCTCCGTCAGCTGCGTGT-AGTT-GGTC-TCCGTGAACCCA-CATTTGGAGGCGACGTTGACGACGATTAGCACCTTCCCCTTGTACATCTCCAGGCTCACCTCCTTGCCGTTGCAATCCTTGACGGTGAATTCGTGTATGGAGGTCTCCGGCACGGATTCCGCCGCCCCCATCTCGCCCTCCTCCTCCT-CCTCCGCCTCGCGGATTTCGCCGTGGAGAAAAAAAAATCGAAATCCCTCTCCCTATCTCTCTCTCTCCTCGCT]
[-] EMBL AU088577 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAAACACAAACCTTACGCTACATACAATTTCAACTTGTCGATATTACACGTTGAT AATAATGTCTTA GGTTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGACAAAACAGTGCCTACCCAACCAGC CAACCTCTACTTACAATATAATAATATATAAAGACAACAAATACACTACACAAAAGAAGGAATATATTGCAAAAATTCACTAT TGAGCATCCCATAGGTCTAGATATTACAACCAGATACTT TGCCTACTTCTGCAAATGAAGGATGGGGGAGGGTACGGGATCTAATCCTCGGAGCGGCCTTCAGGATGTCTTTCTCAAAAGACAAGGGACTGGTCGCAGTCGAGTATCTGTTAATGACTTTGCCATTCTTATCAATAAGAAATTTGGT AAAGTT CCACTTGATTCTAGATCCAAACAAGCCAGGCTT GCTAGCTTTC AAAAATTTGTAAAGTGGTG CAGCATCAGGN CC ATTTACACGC ACCTTCTG AAAAACGGGATATTCAGCTTT AAATCTTGNGCAAGCAAAA TCCTTTATTTGCTGGTCAGATTCTGGCTCTTGTC GCAAGAACT GATTGCA GGGAAATGCTAGAATCTCA ]
[-] EMBL OSA270955 [ TTTTTTTTTTTTTTTTTTTTTTTTACAGTGCAAACACAAACCTTACGCTACATACAATTTCAACTTGTCGATATTACACGTTGAT AATAATGTCTTA GGTTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGACAAAACAGTGCCTACCCAACCAGC CAACCTCTACTTACAATATAATAATATATAAAGACAACAAATACACTACACAAAAGAAGGAATATATTGCAAAAATTCACTAT TGAGCATCCCATAGGTCTAGATATTACAACCAGATACTT TGCCTACTTCTGCAAATGAAGGATGGGGGAGGGTACGAGATCTAATCCTC GAGC GCCTTCAGGATGTCTTTCTCAAAAGACAAGGGACTGGTCGCAGTCGAGTATCTGTTAATGACTTTGCCATTCTTATCAATAAGAAATTTGGT AAAGTT CCACTTGATTCTAGATCCAAACAAGCCAGGCTT GCTAGCTTTC AAAAATTTGTAAAGTGGTG CAGCATCAGGA CC ATTTACACGC ACCTTCTG AAAAACGGGATATTCAGCTTT AAATCTTGTGCAAGCAAAA TCCTTTATTTGCTGGTCAGATCCTGGCTCTTGTC GCAAGAACT GATTGCA GGGAAATGCTAGAATCTCAAAATCTTTGTCCCTGTGTTTCT GATA GAGCTCCGTCAGCTGCGTGT AGTT GGTC TCCGTGAACCCA CATTTGGAGGCGACGTTGACGACGATTAGCACCTTCCCCTTGTACATCTCCAGGCTCACCTCCTTGCCGTTGCAATCCTTGACGGTGAATTCGTGTATGGAGGTCTCCGGCACGGATTCCGCCGCCCCCATCTCGCCCTCCTCCTCCT CCTCCGCCTCGCGGATTTCGCCGTGGAGAAAAAAAAATCGAAAT ]
[+] EMBL CA763033 [ccgcTTTTTTTTTTTTTTTTTTTTTTTTCAGGGCAAACACAAACCTTACGCTACATACAATTTCAACTTGTCGATATTACACGTTGAT AATAATGTCTTA GGTTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGACAAAACAGGGCCTACCCAACCAGC CAACCTCTACTTACAATATAATAATATATGAAGACAACAAATACACTACACAAATGAAGGAATATATTGCAAAAATTCACTAT TGAGCATCCCATAGGTCTAGATATTACAACCAGATACTT TGCCTACTTCTGCAAATGAAGGATGGGGGAGGGTACAAGATCTAATCCTC GAGC GCCTTCAGGATGTCTTTCTCAAAAAACAAGGGACTGGTCGCAGTCAAGTATCTGTTAATGACTTTGCCATTCTTATCAATAAAAAATTTGGT AAAGTT CCACTTGATTCTAGATCCAAACAAGCCAGGCTT GCTAGCTTTC AAAAATTTGTAAAGGGGTG CAGCATCAGGA CC ATTTACACGC ACCTTCTG AAAAACGGGATATTCAGCTTT AAATCTTGTGCAAGCAAAA TCCTTTATTTGCTGGACAGATCCTGGCTCTTGTC GCAAGAACT GATTGCA GGGAAATGCTAAAATCTCAAAATCTTTGTCCCTGGGTTTCT GATA GAGCTCCGTCAGCTGCGTGA AGTTGGGTC TCCGTGAAC ]
[+] EMBL CF308909 [ TTTTTTTTTTTTTTTTTTTTTTTTGCAAACACAAACCTTACGCTACATACAATTTCAACTTGGCGATATTACACGTTGAT AATAATGGCTTA GGCTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGACAAAACAGGGCCTACCCAACCAGC CAACCTTTACTTACAATATAATAATATATAAAGACAACAAATACCCTACACAAAAGAAGGAATATATTGCAAAAATTCACTAT TGAGCATCCCATAGGGCTAGATATTACAACCAGATACTT TGCCTACTTTTGCAAATGAAGGATGGGGGAGGGTACCAAATCTAATCCTC GAGC GCCTTCAGGATGTCTTTCTCAAAAGACAAGGGACTGGTCGCAGTCGAGTATCTGTTAATGACTTTGCCATTCTTATCAATAAAAAATTTGGG AAAGTT CCACTTGATTCTAGATCCAAACAAGCCAGGCTT GGTAGCTTTC AAAAATTTGTAAAGGGGTG CAGCATCAGGA CC ATTTACACGC ACCTTCTG AAAAACGGGATA ]
[-] EMBL AU092994 [ TTTTTTTTTTTTTTTTTTTGCAAACACAAACCTTACGCTACATACAATTTCAACTTGTCGATATTACACGTTGAT AATAATGTCTTA GGTTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGACAAAACAGTGCCTACCCAACCAGC CAACCTCTACTTACAATATAATAATATATAAAGACAACAAATACACTACACAAAAGAAGGAATATATTGCAAAAATTCACTAT TGAGCATCCCATAGGTCTAGATATTACAACCAGATACTT TGCCTACTTCTGCAAATGAAGGATGGGGGAGGGTACGAGATCTAATCCTC GAGC GCCTTCAGGATGTCTTTCTCAAAAGACAAGGGACTGGTCGCAGTCGAGTATCTGTTAATGACTTTGCCATTCTTATCAATAAGAAATTTGGT AAAGTT CCACTTGATTCTAGATCCAAACAAGCCAGGCTT GCTAGCTTTC AAAAATTTGTAAAGTGGTG CAGCATCAGGA CC ATTTACACGC ACCTTCTG AAAAACGGGATATTCAGCTTT AAATCTTGTGCAAGCAAAA TCCTTTATTTGCTGGCAAGANCCTGGCTCTTGTC GCAAGAACTGGATTGCAGGGGAAATGCTAGAATCTCA ]
[-] EMBL AU093030 [ TTTTTTTTTTTTTGCAAACACAAACCTTACGCTACATACAATTTCAACTTGTCGATATTACACGTTGAT AATAATGTCTTA GGTTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGACAAAACAGTGCCTACCCAACCAGC CAACCTCTACTTACAATATAATAATATATAAAGACAACAAATACACTACACAAAAGAAGGAATATATTGCAAAAATTCACTAT TGAGCATCCCATAGGTCTAGATATTACAACCAGATACTT TGCCTACTTCTGCAAATGAAGGATGGGGGAGGGTACGAGATCTAATCCTC GAGC GCCTTCAGGATGTCTTTCTCAAAAGACAAGGGACTGGTCGCAGTCGAGTATCTGTTAATGACTTTGCCATTCTTATCAATAAGAAATTTGGT AAAGTT CCACTTGATTCTAGATCCAAACAAGCCAGGCTT GCTAGCTTTC AAAAATTTGTAAAGTGGTG CAGCATCAGGA CC ATTTACACGC ACCTTCTG AAAAACGGGATATTCAGCTTT AAATCTTGTGCAAGCAAAA TCCTTTATTTGCTGGTCAGATCCTGGCTCTTGNC GCAAGAACT GATTGCA GGGAAATGCTAGAATCTCAAAATCTTTGTCCCTGTGTTTCTGGATAGGAGCTCCGTCAGCNGCGTGT AGTT GGTC ]
[-] EMBL AU029357 [ TTTTTTTTTTTTGCAAACACAAACCTTACGCTACATACAATTTCAACTTGTCGATATTACACGTTGAT AATAATGTCTTA GGTTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGACAAAACAGTGCCTACCCAACCAGC CAACCTCTACTTACAATATAATAATATATAAAGACAACAAATACACTACACAAAAGAAGGAATATATTGCAAAAATTCACTAT TGAGCATCCCATAGGTCTAGATATTACAACCAGATACTT TGCCTACTTCTGCAAATGAAGGATGGGGGAGGGTACGAGATCTAATCCTC GAGC GCCTTCAGGATGTCTTTCTCAAAAGACAAGGGACTGGTCGCAGTCGAGTATCTGTTAATGACTTTGCCATTCTTATCAATAAGAAATTTGGT AAAGTT CCACTTGATTCTAGATCCAAACAAGCCAGGCTT GCTAGCTTTC AAAAATTTGTAAAGTGGTG CAGCATCAGGA CC ATTTACACGC ACCTTCTG AAAAACGGGATATTCAGCTTT AAATCTTGTGCAAGCAAAA TCCTTTATTTGCTGGTCAGANCCTGGCTCTTGTC GCAAGAACT GATTGCA GGGAAATGCTAGAATCTCAAAATCTTTGTCCCTGTGTTTCT GATA GAGCTCCGTCAGCTGCGTG ]
[-] EMBL BI809982 [ TTTTTTTTTTGGCAAACACAAACCTTACGCTACATACAATTTCAACTTGTCGATATTACACGTTGAT AATAATGTCTTA GGTTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGACAAAACAGGGCCTACCCAACCAGCGCAACCTCTACTTACAATATAATAATATATGAAGACAACAAATACACTACACAAAAGAAGGAATATATTGCAAAAATTCACTATGTGAGCATCCCATAGGTCTAGATATTACAACCAGATACTTGTGGCTACTTCTGCAAATGAAGGATGGGGGAGGGTACGAGATCTAATCCTC GAGC GCCTTCAGGATGTCTTTCTCAAAAGACAAGGGACTGGTCGCAGTCGAGTATCTGTTAATGACTTGGCCATTCTTATCAATAAGAAATTGGGTCAAAGTTCCCACTTGATTCTAGATCCAAA AAGCCAGGCTTGGCTAGCTTTC AAAAATTTGTCAAGGGGTGCCAGCATCAGGACCC ATTTACACG ]
[-] EMBL AU092647 [ TTTTT AACACAAACCTTACGCTACATACAATTTCAACTTGTCGATATTACACGTTGAT AATAATGTCTTA GGTTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGACAAAACAGTGCCTACCCAACCAGC CAACCTCTACTTACAATATAATAATATATAAAGACAACAAATACACTACACAAAAGAAGGAATATATTGCAAAAATTCACTAT TGAGCATCCCATAGGTCTAGATATTACAACCAGATACTT TGCCTACTTCTGCAAATGAAGGATGGGGGAGGGTACGAGATCTAATCCTC GAGC GCCTTCAGGATGTCTTTCTCAAAAGACAAGGGACTGGTCGCAGTCGAGTATCTGTTAATGACTTTGCCATTCTTATCAATAAGAAATTTGGT AAAGTT CCACTTGATTCTAGATCCAAACAAGCCAGGCTT GCTAGCTTTC AAAAATTTGTAAAGTGGTG CAGCATCAGGA CC ATTTACACGC ACCTTCTG AAAAACGGGATATTCAGCTTT AAATCTTGTGCAAGCAAAA TCCTTTATTTGCTGGTCAGATCCTGGCTCTTGTC GCAAGAACT GATTGCA GGGAAATGCTAGAATCTCAAAATCTTTGTCCCTGNGTTTCT GATA GAGCTCCGTCAGCTGCGTGTAAGTT GGTCTTCCGTGA ]
[+] EMBL CB965405 [ ACTTGTCGATATTACACGTTGAT AATAATGTCTTA GGTTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGACAAAACGGTGCCTACCCAACCAGC CAACCTCTACTTACAATATAATAATATATGAAAACAACAAATACACTACACAAAAGAAGGAATATATTGCAAGAATTCACTAT TGAGCATCCCATAGGTCTAGATATTACAACCAGATACTT TGCCTACTTCTGCAAATGAAGGATGGGGGAGGGTACAAGATCTAATCCTC GAGC GCCTTCAGGATGTCTTTCTCAAAAGACAAGGGACTGGTCGCAGTCGAGTATCTGTTAATGACTTTGCCATTCTTATCAATAAGAAATTTGGT AAAGTT CCACTTGATTCTAGATCCAAACAAGCCAGGCTT GCTAGCTTTC AAAAATTTGTAAAGTGGTG CAGCATCAGGA CC ATTTACACGC ACCTTCTG AAAAACGGGATATTCAGCTTT AAATCTTGTGCAAGCAAAA TCCTTTATATGCTGGTCAGATCCTGACTactg ]
[+] EMBL CB966179 [ CTTGTCGATATTACACGTTGAT AATAATGTCTTA GGTTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGACAAAACAGTGCCTACCCAACCAGC CAACCTCTACTTACAATATAATAATATATGAAAACAACAAATACACTACACAAAAGAAGGAATATATTGCAAAAATTCACTAT TGAGCATCCCATAGGTCTAGATATTACAACCAGATACTT TGCCTACTTCTGCAAATGAAGGATGGGGGAGGGTACAAGATCTAATCCTC GAGC GCCTTCAGGATGTCTTTCTCAAAAGACAAGGGACTGGTCGCAGTCGAGTATCTGTTAATGACTTTGCCATTCTTATCAATAAGAAATTTGGT AAAGTT CCACTTGATTCTAGATCCAAACAAGCCAGGCTT GCTAGCTTTC AAAAATTTGTAAAGTGGTG CAGCATCAGGA CC ATTTACACGC ACCTTCTG AAAAACGGGATATTCAGCTTT AAATCTTGTGCAAGCAAAA TCCTTTATTTGCTGGTCAGATCCTGGCTCTTG ]
[-] EMBL AK073938 [ CTTGTCGATATTACACGTTGAT AATAATGTCTTA GGTTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGACAAAACAGTGCCTACCCAACCAGC CAACCTCTACTTACAATATAATAATATATAAAGACAACAAATACACTACACAAAAGAAGGAATATATTGCAAAAATTCACTAT TGAGCATCCCATAGGTCTAGATATTACAACCAGATACTT TGCCTACTTCTGCAAATGAAGGATGGGGGAGGGTACGAGATCTAATCCTC GAGC GCCTTCAGGATGTCTTTCTCAAAAGACAAGGGACTGGTCGCAGTCGAGTATCTGTTAATGACTTTGCCATTCTTATCAATAAGAAATTTGGT AAAGTT CCACTTGATTCTAGATCCAAACAAGCCAGGCTT GCTAGCTTTC AAAAATTTGTAAAGTGGTG CAGCATCAGGA CC ATTTACACGC ACCTTCTG AAAAACGGGATATTCAGCTTT AAATCTTGTGCAAGCAAAA TCCTTTATTTGCTGGTCAGATCCTGGCTCTTGTC GCAAGAACT GATTGCA GGGAAATGCTAGAATCTCAAAATCTTTGTCCCTGTGTTTCT GATA GAGCTCCGTCAGCTGCGTGT AGTT GGTC TCCGTGAACCCA CATTTGGAGGCGACGTTGACGACGATTAGCACCTTCCCCTTGTACATCTCCAGGCTCACCTCCTTGCCGTTGCAATCCTTGACGGTGAATTCGTATATGGAGGTCTCCGGCACGGATTCCGCCGCCCCCATCTCGCCCTCCTCCTCCT CCTCCGCCTCGCGGATTTCGCCGTGGAGAAAAAAAAATCGAAATCCCTCTCCCTATCTCTCTCTCTC ]
[-] EMBL CB644190 [ cgTGATAAATAATGTCTTAGGGTTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGACAAAACAGTGCCTACCCAACCAGC CAACCTCTACTTACAATATAATAATATATAAAGACAACAAATACACTACACAAAAGAAGGAATATATTGCAAAAATTCACTAT TGAGCATCCCATAGGTCTAGATATTACAACCAGATACTT TGCCTACTTCTGCAAATGAAGGATGGGGGAGGGTACGAGATCTAATCCTC GAGC GCCTTCAGGATGTCTTTCTCAAAAGACAAGGGACTGGTCGCAGTCGAGTATCTGTTAATGACTTTGCCATTCTTATCAATAAGAAATTTGGT AAAGTT CCACTTGATTCTAGATCCAAACAAGCCAGGCTT GCTAGCTTTC AAAAATTTGTAAAGTGGTG CAGCATCAGGA CC ATTTACACGC ACCTTCTG AAAAACGGGATATTCAGCTTT AAATCTTGTGCAAGCAAAA TCCTTTATTTGCTGGTCAGATCCTGGCTCTTGTC GCAAGAACT GATTGCA GGGAAATGCTAGAATCTCAAAATCTTTGTCCCTGTGTTTCT GATA GAGCTCCGTCAGCTGCGTGT AGTT GGTC TCCGTGAACCCA CATTTGGAGGCGACGTTGACGACGATTAGCACCTTCCCCTTGTACATCTCCAGGCTCACCTCCTTGCCGTTGCAATCCTTGACGGTGAATTCGTGTATGGAGGTCTCCGGCACGGATTCCGCCGCCCCCATCTCGCCCTCCTCCTCCT CCTCCGCCTCGCGGATTTCGCCGTGGAGAAAAAAAAATCGAAAGCCCTC ]
[-] EMBL CF281628 [ GTACGAGATCTAATCCTC GAGC GCTTTCAGGATGTCTTTCTCAAAAGACAAGGGACTGGTCGCAGTCGAGTATCTGTTAATGACTTTGCCATTCTTATCAATAAGAAATTTGGT AAAGTT CCACTTGATTCTAGATCCAAACAAGCCAGGCTT GCTAGCTTTC AAAAATTTGTAAAGTGGTG CAGCATCAGGA CC ATTTACACGC ACCTTCTG AAAAACGGGATATTCAGCTTT AAATCTTGTGCAAGCAAAA TCCTTTATTTGCTGGTCAGATCCTGGCTCTTGTC GCAAGAACT GATTGCA GGGAAATGCTAGAATCTCAAAATCTTTGTCCCTGTGTTTCT GATA GAGCTCCGTCAGCTGCGTGT AGTT GGTC TCCGTGAACCCA CATTTGGAGGCGACGTTGACGACGATTAGCACCTTCCCCTTGTACATCTCCAGGCTCACCTCCTTGCCGTTGCAATCCTTGACGGTGAATTCGTGTATGGAGGTCTCCGGCACGGATTCCGCCGCCCCCATCTCGCCCTCCTCCTCCT CCTCCGCCTCGCGGATTTCGCCG GGAGAAAAAAAAATCGAAATCCCTCTCCCTATCTCTCTCTCTCCTC ]
[-] EMBL CF308908 [ AAAAGACAAGGGACTGGTCGCAGTCGAGTATCTGTTAATGACTTTGCCATTCTTATCAATAAGAAATTTGGT AAAGTT CCACTTGATTCTAGATCCAAACAAGCCAGGCTT GCTAGCTTTC AAAAATTTGTAAAGTGGTG CAGCATCAGGA CC ATTTACACGC ACCTTCTG AAAAACGGGATATTCAGCTTT AAATCTTGTGCAAGCAAAA TCCTTTATTTGCTGGTCAGATCCTGGCTCTTGTC GCAAGAACT GATTGCA GGGAAATGCTAGAATCTCAAAATCTTTGTCCCTGTGTTTCT GATA GAGCTCCGTCAGCTGCGTGT AGTT GGTC TCCGTGAACCCA CATTTGGAGGCGACGTTGACGACGATTAGCACCTTCCCCTTGTACATCTCCAGGCTCACCTCCTTGCCGTTGCAATCCTTGACGGTGAATTCGTGTATGGAGGTCTCCGGCACGGATTCCGCCGCCCCCATCTCGCCCTCCTCCTCCT CCTCCGCCTCGCGGATTTCGCCGTGGAGAAAAAAAAATCGAAATCCCTCTCCCTATCTCTCTCTCTCCTCGCT]
[-] EMBL CF308602 [ GGGACTGGTCGCAGTCGAGTATCTGTTAATGACTTTGCCATTCTTATCAATAAGAAATTTGGT AAAGTT CCACTTGATTCTAGATCCAAACAAGCCAGGCTT GCTAGCTTTC AAAAATTTGTAAAGTGGTG CAGCATCAGGA CC ATTTACACGC ACCTTCTG AAAAACGGGATATTCAGCTTT AAATCTTGTGCAAGCAAAA TCCTTTATTTGCTGGTCAGATCCTGGCTCTTGTC GCAAGAACT GATTGCA GGGAAATGCTAGAATCTCAAAATCTTTGTCCCTGTGTTTCT GATA GAGCTCCGTCAGCTGCGTGT AGTT GGTC TCCGTGAACCCA CATTTGGAGGCGACGTTGACGACGATTAGCACCTTCCCCTTGTACATCTCCAGGCTCACCTCCTTGCCGTTGCAATCCTTGACGGTGAATTCGTGTATGGAGGTCTCCGGCACGGATTCCGCCGCCCCCATCTCGCCCTCCTCCTCCT CCTCCGCCTCGCGGATTTCGCCG GGAGAAAAAAAAATCGAAATCCCTCTCCCTATCTCTCTCTCTCCTC ]
[-] EMBL C74039 [ GGCTT GCTAACTTTC AAAAATTTGTAAAGTGGTG AAGCATCAGGA CC ATTTACACGC ACCTTCTG AAAAACGGGATATTCAGCTTT AAATCTTGTGNAAGCAAAA TCCTTTATTTGCTGGTCAGATCCTGGCTCTTGTC GCAAGAACT GATTGCA GGGAAATGCTAGAATCTCAAAATCTTTGTCCCTGTGTTTCT GATA GAGCTCCGTCAGCTGCGTGT AGTT GGTC TCCGTGAACCCA CATTTGGAGGCGACGTTGACGACGATTAGCACCTTCCCCTTGTACATCTCCAGGCTCACCTCCTTGCCGTTGCAATCCTTGACGGTGAATTCGTGTATGGAGGTCTCCGGCACGGATTCCGCCGCCCCCATCTCGCCCTCCTCCTCCT CCTCCGCCTCGCGGATTTCGCCGTGGAGAAAAAAAAATCGAAATCCCTCTCCCT ]
[-] EMBL OSS15436A [ TAACTTTCAAAAAATTTGTAAAGTGGTG CAACATCAGGA CC ATTTACACGCAACCTTCTG AAAAACGGGATATTCAGCTTT AAATCTTGTGCAAGCAAAA TCCTTTATTTGCTGGTCAGATCCTGGCTCNTGTC GCAAGAACT GATTGCA GGGAAATGCTAGAATCTCAAAATCTTTGTCCCTGTGTTTCT GATA GAGCTCCGTCAGCTGCGTGT AGTT GGTC TCCGTGAACCCA CATTTGGAGNCGACGTTGACGACGATTAGCACCTTCCCCTTGTACATCTCCAGGCTCACCTCCTTGCCGTTGCAATCCNTGACGGTGAATTCGTGTATGGAGGTCTCCGGCACGGATTCCGACGCCCCCATCTCGCCCTCCTCCTCCT CCTCCGCCTCGCGGATTTCGCCGTGGAGAAAAAAAAATCGAAATCCCTCTCCCTATCT ]
[-] EMBL OSS16313A [ TTTC AAAAATTTGNAAA TGGTG CAGCAT AGGA CCAATTTA ACGC ACCTTCTG AAAAACGGGATATTCAGCTTT AAACCNTGTGCAAGCAAAA TCCTTTATTTGCTGGTCAGATCCTGGCTCTTGTC GCAAGAACT GATTGCA GGGAAATGCTAGAATCTNAAAATCTTTGNCCCTGTGTTTCT GATA GAGCTCCGTCAGCTGCGTGT AGTT GGTC TCCGTGAACCCA CATTTGGAGGCGACGTTGACGACGATTAGCACCTTCCCCTTGTACATCTCCAGGCTCACCTCCTTGCCGTTGCAATCCTTGACGGTGAATTCGTGTATGGAGGTNTCCGGCACGGATTCCGCCGCCCCCATCTCGCCCTCCTCCTCCT CCTCCGCCTCGCGGATTTCGCCGTGGAGAAAAAAAAATCGAAATCCCTCTCC ]
[-] EMBL AU063444 [ GTGGTG CAGCANCAGGA CC ATTTACACGC ACCTTCTGAAAAAACGGGATATTCAGCTTTAAAANCTTGTGCAAGCAAAA TCCTTTATTTGCTGGTCAGATCCTGGCTCTTGTC GCAAGAACT GATTGCA GGGAAATGCTAGAATCTCAAAATCTTTGTCCCTGTGTTTCT GATA GAGCTCCGTCAGCTGCGTGT AGTT GGTC TCCGTGAACCCA CATTTGGAGGCGACGTTGACGACGATTAGCACCTTCCCCTTGTACATCTCCAGGCTCACCTCCTTGCCGTTGCAATCCTTGACGGTGAATTCGTGTATGGAGGTCTCCGGCACGGATTCCGCCGCCCCCATCTCGCCCTCCTCCTCCT CCTCCGCCTCGCGGATTTCGCCGTGGAGAAAAAAAAATCGAA ]
[-] EMBL C97143 [ AAACGGGATATTCAGCTTTAAAATCTTGTGAAAGCAAAANTCCTTTATTTGCTGGTCAGATTCTGGCTCTTGTCGGCAAGAACT GATTGCA GGGAAATGCTAGAATCTCAAAATCTTTGTCCCTGTGTTTCT GATA GAGCTCCGTCAGCTGCGTGT AGTT GGTC TCCGTGAACCCA CATTTGGAGGCGACGTTGACGACGATTAGCACCTTCCCCTTGTACATCTCCAGGCTCACCTCCTTGCCGTTGCAATCCTTGACGGTGAATTCGTGTATGGAGGTCTCCGGCACGGATTCCGCCGCCCCCATCTCGCCCTCCTCCTCCTNCCT CG CTCGCGGATTTCGCCGTGGAGAAAAAAAAATCGAAATCCCTCTCCCTATCTCTCTCcg ]
[-] EMBL AU063406 [ A GGGAAATGCTAGAATCTNAAAATCTTTGTCCCTGTGTTTCT GATA GAGCTCCGTCAGCTGCGTGT AGTT GGTC TCCGTGAACCCA TATTTGGAGGCGACGTTGACGACGATTAGCACCTTCCCCTTGTACATCTCCAGGCTCACCTCCTTGNCGTTGCAATCCTTNACGGTGAATTNGTGTATGGAGGTCTCCGGCACGGATTCCGCCGCCCCCATCTCGCCCTCCTCCTCCT CCTCCGCCTCGCGGNTTTCGCCGTGGAGAAANTANAATCGAA ]
[-] EMBL C93496 [ tAGCTCCGNGAGCTACNTGT AGTT GGTC TCCGTGAACCCATGATTTGGAGNCGACGTTGANGACGATTAGCACCTTCCCCTTGTACATCTCGAGGCTCACCTCCTTGCCGTTGCAATCCTTGACGGTGAATTCGTGTATGGAGGTCTCCGGCACGGATTCCGCCGCCCCCATCTCGCCCTCCTCCTCCT CCTCCGCCTCGCGGATTTCGCCGTGGAGAAAAAAAAATCGAAATCCCTCTCCCTATCTC ]
consensusID : consensus_16563#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 795 fasta sequence
[TTTTTTTTTTTTTTGTCGATATTACACGTTGATAATAATGTCTTAGGTTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGACAAA-AC-AGTGCCTACCCAACCAGCCAACCTCT-ACTTACAATATAATAA-TATATAAA-GACAACAAATACA-CTAC-AC-AAAAGAAGGAATATATTGCAAAAATTC-ACTATTGAGCATCCCATAGGTCTAGATATTACAACCAGATACTTTGCCTAC-TTCTGC-A-AATGAAGGATGGGGGAGGGTACGAGATCTAATCCTCGAGCGCCTTCAGGATGTCTTTCTCAAAAGACAAGGGACTGGTCGCAGTCGAGTATCT-GTTAATGACTTTGCCATTCTTATCAATAAGAAATTTGGTAAAGTTCCACTTGATTCTAGATCCAAACAAGCCAGGCT-TGCTAGCTTTCAAAAATTTGTAAAGTGGTGCAGCATCAGGACCATTTACACGCACCTTCTGAAAAACGGGATATTCAGCTTTAAATCTTGTGCAAGCAAAATCCTTTATTTGCTGGTCAGATCCTGGCTCTTGTCGCAAGAACTGATTGCAGGGAAATGCTAGAATCTCAAAATCTTTGTCCCTGTGTTTCTGATAGAGCTCCGTCAGCTGCGTGTAGTTGGTCTCCGTGAACCCACATTTGGAGGCGACGTTGACGACGATTAGCACCTTCCCCTTGTACATCTCCAGGCTCACCTCCTTGCCGTTGCAATCCTTGACGGTGAATTCGTGTATGGAGGTCTCCGGCACGGATTCCGCCGCCCCCATCTCGCC]
[+] EMBL CB644191 [TTTTTTTTTTTTTTGTCGATATTACACGTTGATAATAATGTCTTAGGTTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGACAAA AC AGTGCCTACCCAACCAGCCAACCTCT ACTTACAATATAATAA TATATAAA GACAACAAATACA CTAC AC AAAAGAAGGAATATATTGCAAAAATTC ACTATTGAGCATCCCATAGGTCTAGATATTACAACCAGATACTTTGCCTAC TTCTGC A AATGAAGGATGGGGGAGGGTACGAGATCTAATCCTCGAGCGCCTTCAGGATGTCTTTCTCAAAAGACAAGGGACTGGTCGCAGTCGAGTATCT GTTAATGACTTTGCCATTCTTATCAATAAGAAATTTGGTAAAGTTCCACTTGATTCTAGATCCAAACAAGCCAGGCT TGCTAGCTTTCAAAAATTTGTAAAGTGGTGCAGCATCAGGACCATTTACACGCACCTTCTGAAAAACGGGATATTCAGCTTTAAATCTTGTGCAAGCAAAATCCTTTATTTGCTGGTCAGATCCTGGCTCTTGTCGCAAGAACTGATTGCAGGGAAATGCTAGAATCTCAAAATCTTTGTCCCTGTGTTTCTGATAGAGCTCCGTCAGCTGCGTGTAGTTGGTCTCCGTGAACCCACATTTGGAGGCGACGTTGACGACGATTAGCACCTTCCCCTTGTACATCTCCAGGCTCACCTCCTTGCCGTTGCAATCCTTGACGGTGAATTCGTGTATGGAGGTCTCCGGCACGGATTCCGCCGCCCCCATCTCGCC]
[-] EMBL BI807703 [ TTTTTTTTTTGGGCGATATTACACGTGGATAATAATGTCTTAGGTTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGACAAA AC AGGGCCTACCCAACCAGCCAACCTCT ACTTACAATATAATAA TATATGAA GACAACAAATACA CTAC AC AAAAGAAGGAATATATGGCAAAAATTC ACTATGGAGCATCCCATAGGTCTAGATATTACAACCAGATACTTGGCCTAC TTCTGC A AATGAAGGATGGGGGAGGGTCCGAGATCTAATCCTCGAGCGCCTTCAGGATGTCTTTCTCAAAAGACAAGGGACGGGTCGCCGTCGAGTATCTGGTGAATGACTTGGCCATTCTTATCAATAAGAAATTGGGTAAAGTTCCACTTGATTCTAGATCCAAA AAGCCAGGCTGTGC ]
[-] EMBL AU096774 [ TTTTTTGTCGATATTACACGTTGATAATAATGTCTTAGGTTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGNCAAANACGAGTGCCTACCCAACCAGCCAACCTCTGACTTACAATATAATAAGTATATAAANGACAACAAATACAGCTACGACNAAAAGAAGGAATATATTGCAAAAATTCNACTATTGAGCATCCCATAGGTCTAGATATTACAACCAGATACTTTGCCTACNTTCTGCGA AATGAAGGNTGGGGGAGGGTACGAGATCTAATC ]
[-] EMBL OSC18901 [ ATATTACAACCAGATACTNTGCCTNC TTCTGC ACAATGANGGATGGGGGAGGGTACGAGATCTAATCCTCGAGCGCCTNCAGGATGNCTTTCTCAAAAGACAAGGGACTGGTCGCAGTCGAGTATCT GNTAATGACTTTGCCATTCTTATCAATAAGAAATTTGGTAAAGTTCCACTTGATTCTAGATCCAAACAAGCCAGGCT TGCTAGCTTTCAAAAATTTGTAAAGTGGTGCAGCATCAGGACCATTTACACGCACCTTCTGAAAAACGGGATATTCAGCTTTAAATCTTGTGCAAGCAAAATCCTTTATTTGCTGGTCAGATCCTGGCT ]
[+] EMBL AW070104 [ TAATCCTCGAGCGCCTTCAGGATGTCTTTCTCAAAAGACAAGGGACTGGTCGCAGTCGAGTATCT GTTAATGACTTTGCCATTCTTATCAATAAGAAATTTGGTAAAGTTCCACTTGATTCTAGATCCAAACAAGCCAGGCT TGCTAGCTTTCAAAAATTTGTAAAGTGGTGCAGCATCAGGACCATTTACACGCACCTTCTGAAAAACGGGATATTCAGCTTTAAATCTTGTGCAAGCAAAATCCTTTATTTGCTGGTCAGATCCTGGCTCTTGTCGCAAGAACTGATTGCAGGGAAATGCTAGAATCTCAAAATCTTTGTCCCTGTGTTTCTGATAGAGTTCCGTCAGCTGCGTGTAGTTGGTCTCCGTGAACCCACATTTGGAGGCGACGTTGACGACGATTAGCACCCTCCCCTTGTACCTCggc ]
[-] EMBL CK085277 [ AAGTTCCACTTGATTCTAGATCCAAACAAGCCAGGCT TGCTAGCTTTCAAAAATTTGTAAAGTGGTGCAGCATCAGGACCATTTACACGCACCTTCTGAAAAACGGGATATTCAGCTTTAAATCTTGTGCAAGCAAAATCCTTTATTTGCTGGTCAGATCCTGGCTCTTGTCGCAAGAACTGATTGCAGGGAAATGCTAGAATCTCAAAATCTTTGTCCCTGTGTTTCTGATAGAGCTCCGTCAGCTGCGTGTAGTTGGTCTCCGTGAACCCACATTTGGAGGCGACGTTGACGACGATTAGCACCTTCCCCTTGTACATCTCCAGGCTCACCTCCTTGCCGTTGCAATCCTTGACGGTGAATTCGTGTATGGAG ]
consensusID : consensus_16563#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 777 fasta sequence
[TTTTTTCTTCTCCACGGCGAAATCCGCGAGGCGGAGGAGGAGGAGGAGGGCGAGATGGGGGCGGCGGAATCCGTGCCGGAGACCTCCATACACGAATTCACCGTCAAGGATTGCAACGGCAAGGAGGTGAGCCTGGAGATGTACAAGGGGAAGGTGCTAATCGTCGTCAACGTCGCCTCCAAATGTGGGTTCACGGAGACCAACTACACGCAGCTGACGGAGCTCTATCAGAAACACAGGGACAAAGATTTTGAGATTCTAGCATTTCCCTGCAATCAGTTCTTGCGACAAGAGCCAGGATCTGACCAGCAAATAAAGGATTTTGCTTGCACAAGATTTAAAGCTGAATATCCCGTTTTTCAGAAGGTAAGAACTATCCGATGAACCTGCTTGCTTGCTGGAAGCTTCCAATTATTTATTAATTAGTGAATCCTCAGTTTGAGTCCCTCATTATTGGTACTTAGAGCTTAAAACACTATCTGTATCCTTCTTTTTTAACAGGAAACAGTAGAGAGAACCCTACTGAAACTAATTTTAAATAAATAAATACATATGAATCTACAAAGATCAAAAGGAGCAGGAAGTTCAAACCATAGGCCTTAAATCTCTACCAGCAATCGAAATGTTATAGAAAACACACTTGAAATTCCAATGCAAACTATCCTACCCGATTTTTCAGAGCATCAACCAACTTCTGAAAAAGTAATAGTTTGAGCCAAATCAAGCCCAACAACAAAGTTATTTCCAGTCCGTGCCTCATTATTGGAACCTTGTCAT]
[+] EMBL CB675175 [TTTTTTCTTCTCCACGGCGAAATCCGCGAGGCGGAGGAGGAGGAGGAGGGCGAGATGGGGGCGGCGGAATCCGTGCCGGAGACCTCCATACACGAATTCACCGTCAAGGATTGCAACGGCAAGGAGGTGAGCCTGGAGATGTACAAGGGGAAGGTGCTAATCGTCGTCAACGTCGCCTCCAAATGTGGGTTCACGGAGACCAACTACACGCAGCTGACGGAGCTCTATCAGAAACACAGGGACAAAGATTTTGAGATTCTAGCATTTCCCTGCAATCAGTTCTTGCGACAAGAGCCAGGATCTGACCAGCAAATAAAGGATTTTGCTTGCACAAGATTTAAAGCTGAATATCCCGTTTTTCAGAAGGTAAGAACTATCCGATGAACCTGCTTGCTTGCTGGAAGCTTCCAATTATTTATTAATTAGTGAATCCTCAGTTTGAGTCCCTCATTATTGGTACTTAGAGCTTAAAACACTATCTGTATCCTTCTTTTTTAACAGGAAACAGTAGAGAGAACCCTACTGAAACTAATTTTAAATAAATAAATACATATGAATCTACAAAGATCAAAAGGAGCAGGAAGTTCAAACCATAGGCCTTAAATCTCTACCAGCAATCGAAATGTTATAGAAAACACACTTGAAATTCCAATGCAAACTATCCTACCCGATTTTTCAGAGCATCAACCAACTTCTGAAAAAGTAATAGTTTGAGCCAAATCAAGCCCAACAACAAAGTTATTTCCAGTCCGTGCCTCATTATTGGAACCTTGTCAT]
consensusID : consensus_16563#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 386 fasta sequence
[TTTTTTTTTTTTACGCTACATACAATTTCAACTTGTCGATATTACACGTTGATAATAATGTCTTAGGTTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGACAAAACAGTGCCTACCCAACCAGCCAACCTCTACTTACAATATAATAATATATGAAGACAACAAATACACTACACAAAAGAAGGAATATATTGCAAAAATTCACTATTGAGCATCCCATAGGTCTAGATATTACAACCAGATACTTTGCCTACTTCTGCAAATGAAGGATGGGGGAGGGTACGAGATCTAATCCTCGAGCGCCTTCAGGATGTCTTTCTCAAAAGACAAGGGACTGGTCGCAGTCGAGTATCTGTTCCCCTTGTCTCGTCCTCT]
[+] EMBL CA763032 [TTTTTTTTTTTTACGCTACATACAATTTCAACTTGTCGATATTACACGTTGATAATAATGTCTTAGGTTTCTAAACAAATTTTCAAGCCAAGCCATATAAAACCAGTATAGACAAAACAGTGCCTACCCAACCAGCCAACCTCTACTTACAATATAATAATATATGAAGACAACAAATACACTACACAAAAGAAGGAATATATTGCAAAAATTCACTATTGAGCATCCCATAGGTCTAGATATTACAACCAGATACTTTGCCTACTTCTGCAAATGAAGGATGGGGGAGGGTACGAGATCTAATCCTCGAGCGCCTTCAGGATGTCTTTCTCAAAAGACAAGGGACTGGTCGCAGTCGAGTATCTGTTCCCCTTGTCTCGTCCTCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_16563#1 ------------------------------------------------------------
consensus_16563#2 ------------------------------------------------------------
consensus_16563#0 TTTTTTATTGAACAGTCATGATCAATCATATCTGAAATCACTTGATCTTATTGTAATTCC 60
consensus_16563#4 ------------------------------------------------------------
consensus_16563#3 ------------------------------------------------------------
consensus_16563#1 ------------------------------------------------------------
consensus_16563#2 ------------------------------------------------------------
consensus_16563#0 TATACTTCCTTTGACACAATGAATTCAGGCTATATGGAAAAACTTACACGGATGTTGATG 120
consensus_16563#4 ------------------------------------------------------------
consensus_16563#3 ------------------------------------------------------------
consensus_16563#1 ----------------------------------------------CTTTTTTTTTTTTT 14
consensus_16563#2 ------------------------------------------------------------
consensus_16563#0 TGATTGTCCTAAATTTTATCTGATTTATATTTTTTCAGAGTGTGCTCCCTTCTAACCACA 180
consensus_16563#4 ------------------------------------------------------------
consensus_16563#3 -------------------------------------TTTTTTCTTCTCCACGGCGAAAT 23
consensus_16563#1 TTTTTTTTTTTTTTTTTTGCAAACACAAACCTTACGCTACATACAATTTCAACTTGTCGA 74
consensus_16563#2 -----------------------------------------TTTTTTTTTTTTTTGTCGA 19
consensus_16563#0 ACTTGGAACAAATTCAGTGCAAACACAAACCTTACGCTACATACAATTTCAACTTGTCGA 240
consensus_16563#4 ---------------------TTTTTTTTTTTTACGCTACATACAATTTCAACTTGTCGA 39
consensus_16563#3 CCGCGAGGCGGAGGAGGAGGAGGAGGGCGAGATGGGGGCGGCGGAATCCGTGCCGGAGAC 83
* *
consensus_16563#1 TATTACACGTTGATAATAATGTCTTAGGTTTCTA-AACAAATTTTCAAGCCAAGCCATAT 133
consensus_16563#2 TATTACACGTTGATAATAATGTCTTAGGTTTCTA-AACAAATTTTCAAGCCAAGCCATAT 78
consensus_16563#0 TATTACACGTTGATAATAATGTCTTAGGTTTCTA-AACAAATTTTCAAGCCAAGCCATAT 299
consensus_16563#4 TATTACACGTTGATAATAATGTCTTAGGTTTCTA-AACAAATTTTCAAGCCAAGCCATAT 98
consensus_16563#3 CTCCATACACGAATT-CACCGTCAAGGATTGCAACGGCAAGGAGGTGAGCCTGGAGATGT 142
* ** ** * *** * ** * * *** **** * ** *
consensus_16563#1 AAAACCAGTATAGACAAAACAGTGCCTACCCAACCAGCCAACCTCTACTTACAATATAAT 193
consensus_16563#2 AAAACCAGTATAGACAAAACAGTGCCTACCCAACCAGCCAACCTCTACTTACAATATAAT 138
consensus_16563#0 AAAACCAGTATAGACAAAACAGTGCCTACCCAACCAGCCAACCTCTACTTACAATATAAT 359
consensus_16563#4 AAAACCAGTATAGACAAAACAGTGCCTACCCAACCAGCCAACCTCTACTTACAATATAAT 158
consensus_16563#3 ACAAGGGGAAGGTGCTAATCGTCGTCAACGTCGCCTCCAAATGTGGGTTCACGGAGACCA 202
* ** * * * ** * * * ** ** * ** * * **
consensus_16563#1 AATATATAAAGACAACAAATACACTACACAAAAGAAGGAATATA--TTGCAAAAATTCAC 251
consensus_16563#2 AATATATAAAGACAACAAATACACTACACAAAAGAAGGAATATA--TTGCAAAAATTCAC 196
consensus_16563#0 AATATATAAAGACAACAAATACACTACACAAAAGAAGGAATATA--TTGCAAAAATTCAC 417
consensus_16563#4 AATATATGAAGACAACAAATACACTACACAAAAGAAGGAATATA--TTGCAAAAATTCAC 216
consensus_16563#3 ACTACACGCAGCTGACGGAGCTCTATCAGAAACACAGGGACAAAGATTTTGAGATTCTAG 262
* ** * ** ** * ** *** *** * * * ** * * * *
consensus_16563#1 TATTGAGCATCCCATAGGTCTAGATATTACAACCAGATACTTTGCCTACTTCTGCAAATG 311
consensus_16563#2 TATTGAGCATCCCATAGGTCTAGATATTACAACCAGATACTTTGCCTACTTCTGCAAATG 256
consensus_16563#0 TATTGAGCATCCCATAGGTCTAGATATTACAACCAGATACTTTGCCTACTTCTGCAAATG 477
consensus_16563#4 TATTGAGCATCCCATAGGTCTAGATATTACAACCAGATACTTTGCCTACTTCTGCAAATG 276
consensus_16563#3 CATT------TCCCTGCAATCAGTTCTTGCGACAAGAGCCAGGATCTGAC-CAGCAAATA 315
*** ** * ** * ** * ** *** * ** * ******
consensus_16563#1 AAGGATGGGGGAGGGTACGAGATCTAATCCTCGAGCGCCTTCAGGATGTCTTTCTCAAAA 371
consensus_16563#2 AAGGATGGGGGAGGGTACGAGATCTAATCCTCGAGCGCCTTCAGGATGTCTTTCTCAAAA 316
consensus_16563#0 AAGGATGGGGGAGGGTACGAGATCTAATCCTCGAGCGCCTTCAGGATGTCTTTCTCAAAA 537
consensus_16563#4 AAGGATGGGGGAGGGTACGAGATCTAATCCTCGAGCGCCTTCAGGATGTCTTTCTCAAAA 336
consensus_16563#3 AAGGATTTTGCTTG-CACAAGATTTAAAGCT-GAATATCCC------GTTTTTCAGAAGG 367
****** * * ** **** *** ** ** * ** **** **
consensus_16563#1 GACAAGGGACTGGTCGCAGTCGAGTATCTGTTAATGACTTTGCCATTCTTATCAATAAGA 431
consensus_16563#2 GACAAGGGACTGGTCGCAGTCGAGTATCTGTTAATGACTTTGCCATTCTTATCAATAAGA 376
consensus_16563#0 GACAAGGGACTGGTCGCAGTCGAGTATCTGTTAATGACTTTGCCATTCTTATCAATAAGA 597
consensus_16563#4 GACAAGGGACTGGTCGCAGTCGAGTATCTGTTCCC--CTTGTCTCGTCCTCT-------- 386
consensus_16563#3 TAAGAACTATCCGATGAACCTGCTTGCTTGCTGGAAGCTTCCAATTATTTATTAATTAGT 427
* * * * * * * * ** * *** * *
consensus_16563#1 AATTT----GGTAAAGTTCCACTTGATTCTAGATCCAAACAAGCCAGGCTTGCTAGCTTT 487
consensus_16563#2 AATTT----GGTAAAGTTCCACTTGATTCTAGATCCAAACAAGCCAGGCTTGCTAGCTTT 432
consensus_16563#0 AATTT----GGTAAAGTTCCACTTGATTCTAGATCCAAACAGGCCGGG-TTGCTGNTTTT 652
consensus_16563#4 ------------------------------------------------------------
consensus_16563#3 GAATCCTCAGTTTGAGTCCCTCATTATTGGTACTTAGAGCTTAAAACACTATCTGTATCC 487
consensus_16563#1 CAAAAATTTGTAAAGTGGTGCAGCATCAGGACCATTTACACGCACCTTCTGA---AAAAC 544
consensus_16563#2 CAAAAATTTGTAAAGTGGTGCAGCATCAGGACCATTTACACGCACCTTCTGA---AAAAC 489
consensus_16563#0 NAAAANTTTGTAAAGTGGTGCAGCATCAGGACCATTTACACGCACCTGCAGATACAAAAT 712
consensus_16563#4 ------------------------------------------------------------
consensus_16563#3 TTCTTTTTTAACAGGAAACAGTAGAGAGAACCCTACTGAAACTAATTTTAAATAAATAAA 547
consensus_16563#1 GGGATATTCAGCTTTAAATCTTGTGCA-AGCAAAATCCTTTATTTGCTGGTCAGATCCTG 603
consensus_16563#2 GGGATATTCAGCTTTAAATCTTGTGCA-AGCAAAATCCTTTATTTGCTGGTCAGATCCTG 548
consensus_16563#0 TTGAAAAATAACTAGCGGCTTCCAACA-AAATAAAG--TTAAATAAATCCACATGTCGTA 769
consensus_16563#4 ------------------------------------------------------------
consensus_16563#3 TACATATGAATCTACAAAGATCAAAAGGAGCAGGAAGTTCAAACCATAGGCCTTAAATCT 607
consensus_16563#1 GCTCTTGTCGCAA-GAACTGATTGCAGGGAAATGCTAGAATCT----CAAAATCTTTGTC 658
consensus_16563#2 GCTCTTGTCGCAA-GAACTGATTGCAGGGAAATGCTAGAATCT----CAAAATCTTTGTC 603
consensus_16563#0 ATTGTTATGGCTATGTAATGATTGCAAG-AAATATGGGATTCA----AATAAATTCTTAC 824
consensus_16563#4 ------------------------------------------------------------
consensus_16563#3 CTACCAGCAATCGAAATGTTATAGAAAACACACTTGAAATTCCAATGCAAACTATCCTAC 667
consensus_16563#1 CCTGTGTTTCTGATAGAGCTCCGTCAGCTGCGTGTA-GTTGGTCTCCGTGAACCCACATT 717
consensus_16563#2 CCTGTGTTTCTGATAGAGCTCCGTCAGCTGCGTGTA-GTTGGTCTCCGTGAACCCACATT 662
consensus_16563#0 AAAAAGATAATTAGATAGTATTGCT--TTGCATTAG-GTTATC--------ATCAACATT 873
consensus_16563#4 ------------------------------------------------------------
consensus_16563#3 CCGATTTTTCAGAGCATCAACCAACTTCTGAAAAAGTAATAGTTTGAGCCAAATCAAGCC 727
consensus_16563#1 TGGAGGCGACGTTGACGACGATTAGCACCTTCCCCTTGTACATCTCCAGGCTCACCTCCT 777
consensus_16563#2 TGGAGGCGACGTTGACGACGATTAGCACCTTCCCCTTGTACATCTCCAGGCTCACCTCCT 722
consensus_16563#0 AGAAGACG-TAATGTGGCTAGTCTCTAGATTCTTTTAACATATTTTCAAA---AGTTATT 929
consensus_16563#4 ------------------------------------------------------------
consensus_16563#3 CAACAACAAAGTTATTTCCAGTCCGTGCCTCATTATTGGAACCTTGTCAT---------- 777
consensus_16563#1 TGCCGTTGCAATCCTTGACGGTGAATTCGTGTATGGAGGTCTCCGGCACGGATTCCGCCG 837
consensus_16563#2 TGCCGTTGCAATCCTTGACGGTGAATTCGTGTATGGAGGTCTCCGGCACGGATTCCGCCG 782
consensus_16563#0 TTTAATAAAGA-----AAAGGTAAAATATCTTGTGGCAAAGATAATGTAGAACTTTTTCA 984
consensus_16563#4 ------------------------------------------------------------
consensus_16563#3 ------------------------------------------------------------
consensus_16563#1 CCCCCATCTCGCCCTCCTCCTCCTCCTCCGCCTCGCGGATTTCGCCGTGGAGAAAAAAAA 897
consensus_16563#2 CCCCCATCTCGCC----------------------------------------------- 795
consensus_16563#0 CCTTCATGAAAATAGTGGAAAAGGCTCT-------------------------------- 1012
consensus_16563#4 ------------------------------------------------------------
consensus_16563#3 ------------------------------------------------------------
consensus_16563#1 ATCGAAATCCCTCTCCCTATCTCTCTCTCTCCTCGCT 934
consensus_16563#2 -------------------------------------
consensus_16563#0 -------------------------------------
consensus_16563#4 -------------------------------------
consensus_16563#3 -------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||