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Oryza sativa
cluster # 1662 cluster # 1662       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1662#0 length = 3437 sequences # 1  
consensus_1662#1 length = 306 sequences # 1  

consensusID : consensus_1662#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3437
fasta sequence
                              [TCTGGAACGACGCGGACACACTGGTTACAAATCCGGACATCCCGTTGGAGATGATTTTGTTCTCGGTGATTGGGCACAGTGATTTTGATGCTGCTCCTGATCTCATCCTGACGGAGGATTTCAATGGTGTTAACGCTGGAGTATTCTTCATACGGGGCTCAAAGTGGAGTGAGAAGTTTCTGGACACATGGTGGAACCTTACATCCTTCATACAATTTGGTTCCACAAAAAGTGGAGATAATGCAGCATTGAAGCATCTTATAGATCACTTTTCACCTGAAGAAATGCAAGAACATGTTCGGATTGCAAAAATGCAGTGCTTATTTAATTCCTATCCTTGGAGACCCACATGGAAATCAATGCATCGCCTTATTTTCCATCTTTCTACTACATGGAAAGGGGTTTATTCAGATGGAGACTTTATGGTTCATTTCGCTGGCCTAGATGACAAGATTGGTTGGATAAATAAGATTCTTAGGGAGAGAAGATTTCTCAGATGATTAGTTTTACTTCAATTTTTCATCAACTTAAGGAGAACTAGAGAGAATGCAAAAAGTTTGGTTGATCTGTAAAGTGCATGAGTTGCTGTTTGATGTGTATAGAATGACATTTGTTCGTTAGCGAAATACAGTTCTGCTACTAATTTCAAAGTTTTTCATTATCTTTGCAGAATGAACTATTGATCAGCAGAGGCAGCTAGTTGCCTGATATTTCCTAATCCGTGGTGTGGTACCTTATTGTTGCAGTTACCATCCGCTGGTAATTAACCCTTATGGTTCTGCAGGCTGGACTTGTCCACCAGCTCGGTGCCTTTTCTGTTCAAGGTTTTAGAACAACCATTGACTTGGGAAGTATACTAGTCTGTTCCAGGGCTGTTCTGTCCAGGAGTCGGGAACAGAAAATTGAATTACGGAGTAACCTATTCGTTGTAAACAAGAAAGGTGGCATGGACTCGTCTACAATATCAGGGGCGAAGCCTTCACAGGGACACATGGGTTTAGGGTTCTGGCGACGCCCGGGCGATCGGGTGGCGGCGGCCTGCACTCAAACTTTGCGATGGTTTTGGATGGGGTTCATCCCCGATCTGCTCTGGATGTCTGCAGGGGTTCCGCCTGCTCGATCCTCTTCGGTTTTGGGTAAAGATCAGGGTTTTGGAATAGATGTTGAATTAGGGTTTGTTCTGCAATCACCGTGGGGCAGAGGAAGTCGTCTACCCTGGGTAATTCCGTGGGGATATACAAGCCCTAGGTTTCCAAACCAGAATCGGATTTGTTCTAGTGGTTTCCAATCTGTTATTCCTCGTTATGGTCTAGGTCATGATCTGTGGTGTTGCCTTTGGTATGATCTCGTGAAAGATTGGGACTCGGAGAGGCAACCCTTTATAAGGAACGATCAGGGAGGGCTGAAGGCAGTATTTTCACAAGATCCAAAGAGAACAGCGTCAAGGTCTCGTTCACCCCTGTTTCGTGGTCAAGATCTCCAGATCCAATCTATGGTGTCTTCCATAGGTGGGGGCGATAAAGGGATCATCAATGCGATGATTACCCGCCCGAAGCCGAATGAGGATGCCTTGTTGAGTCTGTCAGATCAAGGGTTAGGCTTGGAGTTGGCGGCGACGAATCCTGCTGGGAGTAATCTGCTGGGAGGAAATACTCACATGGAGGCGGCACTGTCCCAGGGGAATCAGAAGTTAGGACCTCGCAGGGAGGAGGAATCAAGCAGTCAGTCAAGAGGACCTGAAGCCTGTACTGTGGGAGAGATCGAAACAGATGAGGAAGATGTGATAGAGGAATATAGAGGATGAAGAGATCAAGCAGGATGGTATCTGGACCGTGCTTGCTCGGTTCTACTCTCTACGTAATCCAAATCAAACTGCGCTTTTTGAAGATATGAGTAGAGCATGGCGGCTGCGTTCTGATATGACACACAAATCCCTGAGAGACAACCTGTTCATCATCACCTTTAGCACAGAGGGTGATTACAAGTTCGTCCTGCAAGGAGGTCCCTGGTTGCATAAGGGAGATGCCCTGCTGGTTGCGGCATTTGACGGTCTAACCTGCCCTTCAAAAATCCCATTGGAGACAGTACCGATCTGGATTCGTATCTACGATCTCCCCTTGGTTTTAATGACCAAAGCCAGAGGCCAGCTATATGGGAGCAGATTTGGTTGTGTTCGGGAGGTGGATGTGGAAGAAGACGGAAGGAATAGACATGACTTCTTTAGGATCAGGGTGGACCTGCCTGTCAAGAAACCCCTGAAACCAAAGATTGCAATTAAAATGCATGTTCAAGGCAAGGAGGAGACTTCTTTAGGATCAGGGTGGACCTGCCTGTCAAGAAACCCCCGAAACCAAAGATTGCAATTAAAATGCATGTTCAAGGCAAGGAGGAGATTAAGAGATTTGATGTTCGCTATGAAAGGATCCCATACTTCTGCTTTATGTGTGGGTATATCGGCCACTCAGATAAGGAATGTGATAAGAAGGGTGCAAATAATGAGGTACCGTTCCAATTCTCGGCTGAACTGAGATGCTCTCCTCTTAAGCCTTTTGAGAGGAAGATTGGCAAGGTTAAAGCTACTCAGAAGCCCGAGGTCTCTCACAGATTGGTCTTCCGTGGTGCTGGAAGTGCAAACTCATCATCATCCAAGAGACCTCAAGAAGAACATTGGGATGAAGCTATCCCCCCGAGAGTGGATGCCCGTGATGGTTTTGAGACCAAGGAGGAGGAAGGGGATATGTTGGTGGATGAACAGTTGGCCAGCCACGCTAGAAAACTCAATGTTTCTGCAGAAGTTGAGCGAACAGGGGGCAACAGAGGTAATAAATCCTCAGAGCCTAGCTCAAAGGGGGAGATGATACCGGCGATGGCTAATTTGCAGCAAGCTGCATCTTTTGGAGAAGTCTCAACAAAAGATGTCTTATCAGCCCAAAAGAGGAGTACACCAGCACAAAGTGGACTCAAGAAGACAGGCAGGGTTCAACAGGCGTTGATTGAGCTAGGACAGGAGCCAGCGGCTATGCTGAAACAGGCGCCGGAGATAGGTTTTCAAGGCAGGGAGTTCAAAAGATTCAAGAAGACAGACAGGGAAGCTTTGGTGGGGGGAGAGTCGGAAGCAACCAGCCCTGGGGCTGCTGGTAAACTGGCGGGTTCCATGAAGGGAACTCGCCAGGAGCAATAAGTTGTTTAAGTTGGAACTGTCGTGGCATTGGGAACCCCACGACAGTTTGGGATCTTTGTGCCTTGGTCGGGAGGCTGGTTCCAAAATTGTGTTTCTTTGTGAGACGAGACAAAAGTTTGAAAAAGTTCGTCGGCTTCGGAATAGATTAGGGTTAAAAGGGTGTGCTAGTGTAAGTTGTGAAGGTTTAAGTGGTGGGTTGGCTTTGTTTTGGGATGAGTCTGTTTATGTTGAAATAAAAGGAATGAATGAGAGATAC]

[+] EMBL AK120134             [TCTGGAACGACGCGGACACACTGGTTACAAATCCGGACATCCCGTTGGAGATGATTTTGTTCTCGGTGATTGGGCACAGTGATTTTGATGCTGCTCCTGATCTCATCCTGACGGAGGATTTCAATGGTGTTAACGCTGGAGTATTCTTCATACGGGGCTCAAAGTGGAGTGAGAAGTTTCTGGACACATGGTGGAACCTTACATCCTTCATACAATTTGGTTCCACAAAAAGTGGAGATAATGCAGCATTGAAGCATCTTATAGATCACTTTTCACCTGAAGAAATGCAAGAACATGTTCGGATTGCAAAAATGCAGTGCTTATTTAATTCCTATCCTTGGAGACCCACATGGAAATCAATGCATCGCCTTATTTTCCATCTTTCTACTACATGGAAAGGGGTTTATTCAGATGGAGACTTTATGGTTCATTTCGCTGGCCTAGATGACAAGATTGGTTGGATAAATAAGATTCTTAGGGAGAGAAGATTTCTCAGATGATTAGTTTTACTTCAATTTTTCATCAACTTAAGGAGAACTAGAGAGAATGCAAAAAGTTTGGTTGATCTGTAAAGTGCATGAGTTGCTGTTTGATGTGTATAGAATGACATTTGTTCGTTAGCGAAATACAGTTCTGCTACTAATTTCAAAGTTTTTCATTATCTTTGCAGAATGAACTATTGATCAGCAGAGGCAGCTAGTTGCCTGATATTTCCTAATCCGTGGTGTGGTACCTTATTGTTGCAGTTACCATCCGCTGGTAATTAACCCTTATGGTTCTGCAGGCTGGACTTGTCCACCAGCTCGGTGCCTTTTCTGTTCAAGGTTTTAGAACAACCATTGACTTGGGAAGTATACTAGTCTGTTCCAGGGCTGTTCTGTCCAGGAGTCGGGAACAGAAAATTGAATTACGGAGTAACCTATTCGTTGTAAACAAGAAAGGTGGCATGGACTCGTCTACAATATCAGGGGCGAAGCCTTCACAGGGACACATGGGTTTAGGGTTCTGGCGACGCCCGGGCGATCGGGTGGCGGCGGCCTGCACTCAAACTTTGCGATGGTTTTGGATGGGGTTCATCCCCGATCTGCTCTGGATGTCTGCAGGGGTTCCGCCTGCTCGATCCTCTTCGGTTTTGGGTAAAGATCAGGGTTTTGGAATAGATGTTGAATTAGGGTTTGTTCTGCAATCACCGTGGGGCAGAGGAAGTCGTCTACCCTGGGTAATTCCGTGGGGATATACAAGCCCTAGGTTTCCAAACCAGAATCGGATTTGTTCTAGTGGTTTCCAATCTGTTATTCCTCGTTATGGTCTAGGTCATGATCTGTGGTGTTGCCTTTGGTATGATCTCGTGAAAGATTGGGACTCGGAGAGGCAACCCTTTATAAGGAACGATCAGGGAGGGCTGAAGGCAGTATTTTCACAAGATCCAAAGAGAACAGCGTCAAGGTCTCGTTCACCCCTGTTTCGTGGTCAAGATCTCCAGATCCAATCTATGGTGTCTTCCATAGGTGGGGGCGATAAAGGGATCATCAATGCGATGATTACCCGCCCGAAGCCGAATGAGGATGCCTTGTTGAGTCTGTCAGATCAAGGGTTAGGCTTGGAGTTGGCGGCGACGAATCCTGCTGGGAGTAATCTGCTGGGAGGAAATACTCACATGGAGGCGGCACTGTCCCAGGGGAATCAGAAGTTAGGACCTCGCAGGGAGGAGGAATCAAGCAGTCAGTCAAGAGGACCTGAAGCCTGTACTGTGGGAGAGATCGAAACAGATGAGGAAGATGTGATAGAGGAATATAGAGGATGAAGAGATCAAGCAGGATGGTATCTGGACCGTGCTTGCTCGGTTCTACTCTCTACGTAATCCAAATCAAACTGCGCTTTTTGAAGATATGAGTAGAGCATGGCGGCTGCGTTCTGATATGACACACAAATCCCTGAGAGACAACCTGTTCATCATCACCTTTAGCACAGAGGGTGATTACAAGTTCGTCCTGCAAGGAGGTCCCTGGTTGCATAAGGGAGATGCCCTGCTGGTTGCGGCATTTGACGGTCTAACCTGCCCTTCAAAAATCCCATTGGAGACAGTACCGATCTGGATTCGTATCTACGATCTCCCCTTGGTTTTAATGACCAAAGCCAGAGGCCAGCTATATGGGAGCAGATTTGGTTGTGTTCGGGAGGTGGATGTGGAAGAAGACGGAAGGAATAGACATGACTTCTTTAGGATCAGGGTGGACCTGCCTGTCAAGAAACCCCTGAAACCAAAGATTGCAATTAAAATGCATGTTCAAGGCAAGGAGGAGACTTCTTTAGGATCAGGGTGGACCTGCCTGTCAAGAAACCCCCGAAACCAAAGATTGCAATTAAAATGCATGTTCAAGGCAAGGAGGAGATTAAGAGATTTGATGTTCGCTATGAAAGGATCCCATACTTCTGCTTTATGTGTGGGTATATCGGCCACTCAGATAAGGAATGTGATAAGAAGGGTGCAAATAATGAGGTACCGTTCCAATTCTCGGCTGAACTGAGATGCTCTCCTCTTAAGCCTTTTGAGAGGAAGATTGGCAAGGTTAAAGCTACTCAGAAGCCCGAGGTCTCTCACAGATTGGTCTTCCGTGGTGCTGGAAGTGCAAACTCATCATCATCCAAGAGACCTCAAGAAGAACATTGGGATGAAGCTATCCCCCCGAGAGTGGATGCCCGTGATGGTTTTGAGACCAAGGAGGAGGAAGGGGATATGTTGGTGGATGAACAGTTGGCCAGCCACGCTAGAAAACTCAATGTTTCTGCAGAAGTTGAGCGAACAGGGGGCAACAGAGGTAATAAATCCTCAGAGCCTAGCTCAAAGGGGGAGATGATACCGGCGATGGCTAATTTGCAGCAAGCTGCATCTTTTGGAGAAGTCTCAACAAAAGATGTCTTATCAGCCCAAAAGAGGAGTACACCAGCACAAAGTGGACTCAAGAAGACAGGCAGGGTTCAACAGGCGTTGATTGAGCTAGGACAGGAGCCAGCGGCTATGCTGAAACAGGCGCCGGAGATAGGTTTTCAAGGCAGGGAGTTCAAAAGATTCAAGAAGACAGACAGGGAAGCTTTGGTGGGGGGAGAGTCGGAAGCAACCAGCCCTGGGGCTGCTGGTAAACTGGCGGGTTCCATGAAGGGAACTCGCCAGGAGCAATAAGTTGTTTAAGTTGGAACTGTCGTGGCATTGGGAACCCCACGACAGTTTGGGATCTTTGTGCCTTGGTCGGGAGGCTGGTTCCAAAATTGTGTTTCTTTGTGAGACGAGACAAAAGTTTGAAAAAGTTCGTCGGCTTCGGAATAGATTAGGGTTAAAAGGGTGTGCTAGTGTAAGTTGTGAAGGTTTAAGTGGTGGGTTGGCTTTGTTTTGGGATGAGTCTGTTTATGTTGAAATAAAAGGAATGAATGAGAGATAC]


>consensus_1662#0 TCTGGAACGACGCGGACACACTGGTTACAAATCCGGACATCCCGTTGGAGATGATTTTGT TCTCGGTGATTGGGCACAGTGATTTTGATGCTGCTCCTGATCTCATCCTGACGGAGGATT TCAATGGTGTTAACGCTGGAGTATTCTTCATACGGGGCTCAAAGTGGAGTGAGAAGTTTC TGGACACATGGTGGAACCTTACATCCTTCATACAATTTGGTTCCACAAAAAGTGGAGATA ATGCAGCATTGAAGCATCTTATAGATCACTTTTCACCTGAAGAAATGCAAGAACATGTTC GGATTGCAAAAATGCAGTGCTTATTTAATTCCTATCCTTGGAGACCCACATGGAAATCAA TGCATCGCCTTATTTTCCATCTTTCTACTACATGGAAAGGGGTTTATTCAGATGGAGACT TTATGGTTCATTTCGCTGGCCTAGATGACAAGATTGGTTGGATAAATAAGATTCTTAGGG AGAGAAGATTTCTCAGATGATTAGTTTTACTTCAATTTTTCATCAACTTAAGGAGAACTA GAGAGAATGCAAAAAGTTTGGTTGATCTGTAAAGTGCATGAGTTGCTGTTTGATGTGTAT AGAATGACATTTGTTCGTTAGCGAAATACAGTTCTGCTACTAATTTCAAAGTTTTTCATT ATCTTTGCAGAATGAACTATTGATCAGCAGAGGCAGCTAGTTGCCTGATATTTCCTAATC CGTGGTGTGGTACCTTATTGTTGCAGTTACCATCCGCTGGTAATTAACCCTTATGGTTCT GCAGGCTGGACTTGTCCACCAGCTCGGTGCCTTTTCTGTTCAAGGTTTTAGAACAACCAT TGACTTGGGAAGTATACTAGTCTGTTCCAGGGCTGTTCTGTCCAGGAGTCGGGAACAGAA AATTGAATTACGGAGTAACCTATTCGTTGTAAACAAGAAAGGTGGCATGGACTCGTCTAC AATATCAGGGGCGAAGCCTTCACAGGGACACATGGGTTTAGGGTTCTGGCGACGCCCGGG CGATCGGGTGGCGGCGGCCTGCACTCAAACTTTGCGATGGTTTTGGATGGGGTTCATCCC CGATCTGCTCTGGATGTCTGCAGGGGTTCCGCCTGCTCGATCCTCTTCGGTTTTGGGTAA AGATCAGGGTTTTGGAATAGATGTTGAATTAGGGTTTGTTCTGCAATCACCGTGGGGCAG AGGAAGTCGTCTACCCTGGGTAATTCCGTGGGGATATACAAGCCCTAGGTTTCCAAACCA GAATCGGATTTGTTCTAGTGGTTTCCAATCTGTTATTCCTCGTTATGGTCTAGGTCATGA TCTGTGGTGTTGCCTTTGGTATGATCTCGTGAAAGATTGGGACTCGGAGAGGCAACCCTT TATAAGGAACGATCAGGGAGGGCTGAAGGCAGTATTTTCACAAGATCCAAAGAGAACAGC GTCAAGGTCTCGTTCACCCCTGTTTCGTGGTCAAGATCTCCAGATCCAATCTATGGTGTC TTCCATAGGTGGGGGCGATAAAGGGATCATCAATGCGATGATTACCCGCCCGAAGCCGAA TGAGGATGCCTTGTTGAGTCTGTCAGATCAAGGGTTAGGCTTGGAGTTGGCGGCGACGAA TCCTGCTGGGAGTAATCTGCTGGGAGGAAATACTCACATGGAGGCGGCACTGTCCCAGGG GAATCAGAAGTTAGGACCTCGCAGGGAGGAGGAATCAAGCAGTCAGTCAAGAGGACCTGA AGCCTGTACTGTGGGAGAGATCGAAACAGATGAGGAAGATGTGATAGAGGAATATAGAGG ATGAAGAGATCAAGCAGGATGGTATCTGGACCGTGCTTGCTCGGTTCTACTCTCTACGTA ATCCAAATCAAACTGCGCTTTTTGAAGATATGAGTAGAGCATGGCGGCTGCGTTCTGATA TGACACACAAATCCCTGAGAGACAACCTGTTCATCATCACCTTTAGCACAGAGGGTGATT ACAAGTTCGTCCTGCAAGGAGGTCCCTGGTTGCATAAGGGAGATGCCCTGCTGGTTGCGG CATTTGACGGTCTAACCTGCCCTTCAAAAATCCCATTGGAGACAGTACCGATCTGGATTC GTATCTACGATCTCCCCTTGGTTTTAATGACCAAAGCCAGAGGCCAGCTATATGGGAGCA GATTTGGTTGTGTTCGGGAGGTGGATGTGGAAGAAGACGGAAGGAATAGACATGACTTCT TTAGGATCAGGGTGGACCTGCCTGTCAAGAAACCCCTGAAACCAAAGATTGCAATTAAAA TGCATGTTCAAGGCAAGGAGGAGACTTCTTTAGGATCAGGGTGGACCTGCCTGTCAAGAA ACCCCCGAAACCAAAGATTGCAATTAAAATGCATGTTCAAGGCAAGGAGGAGATTAAGAG ATTTGATGTTCGCTATGAAAGGATCCCATACTTCTGCTTTATGTGTGGGTATATCGGCCA CTCAGATAAGGAATGTGATAAGAAGGGTGCAAATAATGAGGTACCGTTCCAATTCTCGGC TGAACTGAGATGCTCTCCTCTTAAGCCTTTTGAGAGGAAGATTGGCAAGGTTAAAGCTAC TCAGAAGCCCGAGGTCTCTCACAGATTGGTCTTCCGTGGTGCTGGAAGTGCAAACTCATC ATCATCCAAGAGACCTCAAGAAGAACATTGGGATGAAGCTATCCCCCCGAGAGTGGATGC CCGTGATGGTTTTGAGACCAAGGAGGAGGAAGGGGATATGTTGGTGGATGAACAGTTGGC CAGCCACGCTAGAAAACTCAATGTTTCTGCAGAAGTTGAGCGAACAGGGGGCAACAGAGG TAATAAATCCTCAGAGCCTAGCTCAAAGGGGGAGATGATACCGGCGATGGCTAATTTGCA GCAAGCTGCATCTTTTGGAGAAGTCTCAACAAAAGATGTCTTATCAGCCCAAAAGAGGAG TACACCAGCACAAAGTGGACTCAAGAAGACAGGCAGGGTTCAACAGGCGTTGATTGAGCT AGGACAGGAGCCAGCGGCTATGCTGAAACAGGCGCCGGAGATAGGTTTTCAAGGCAGGGA GTTCAAAAGATTCAAGAAGACAGACAGGGAAGCTTTGGTGGGGGGAGAGTCGGAAGCAAC CAGCCCTGGGGCTGCTGGTAAACTGGCGGGTTCCATGAAGGGAACTCGCCAGGAGCAATA AGTTGTTTAAGTTGGAACTGTCGTGGCATTGGGAACCCCACGACAGTTTGGGATCTTTGT GCCTTGGTCGGGAGGCTGGTTCCAAAATTGTGTTTCTTTGTGAGACGAGACAAAAGTTTG AAAAAGTTCGTCGGCTTCGGAATAGATTAGGGTTAAAAGGGTGTGCTAGTGTAAGTTGTG AAGGTTTAAGTGGTGGGTTGGCTTTGTTTTGGGATGAGTCTGTTTATGTTGAAATAAAAG GAATGAATGAGAGATAC



consensusID : consensus_1662#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 306
fasta sequence
                              [AAAAGAACATGGTTGCAGGATCCAAAAAAATCCGCAACGTGGCTTTAATGTTGAATTGCCTGATGCACTTGGGAGACCCCACATTGGGAAAATCCAAATGGCTATGCCGCACTTTGATGTGTGCCCAATGCTGTGTGCTACTCACAATGGAAAGGGTTTATTCAAGATGGGAGACTTTATGGGTTCATTTCAGCTGGCCCTAGATGACAAGCTTGTTGGGATAAATAAGATTCTTAGGGAGAGAAGATTTCTCAAGATGGATTAGTTTTACTGCAAATGTGTTTGCAATCACTTAAGGGAGAACTG]

[+] EMBL BI810436             [AAAAGAACATGGTTGCAGGATCCAAAAAAATCCGCAACGTGGCTTTAATGTTGAATTGCCTGATGCACTTGGGAGACCCCACATTGGGAAAATCCAAATGGCTATGCCGCACTTTGATGTGTGCCCAATGCTGTGTGCTACTCACAATGGAAAGGGTTTATTCAAGATGGGAGACTTTATGGGTTCATTTCAGCTGGCCCTAGATGACAAGCTTGTTGGGATAAATAAGATTCTTAGGGAGAGAAGATTTCTCAAGATGGATTAGTTTTACTGCAAATGTGTTTGCAATCACTTAAGGGAGAACTG]


>consensus_1662#1 AAAAGAACATGGTTGCAGGATCCAAAAAAATCCGCAACGTGGCTTTAATGTTGAATTGCC TGATGCACTTGGGAGACCCCACATTGGGAAAATCCAAATGGCTATGCCGCACTTTGATGT GTGCCCAATGCTGTGTGCTACTCACAATGGAAAGGGTTTATTCAAGATGGGAGACTTTAT GGGTTCATTTCAGCTGGCCCTAGATGACAAGCTTGTTGGGATAAATAAGATTCTTAGGGA GAGAAGATTTCTCAAGATGGATTAGTTTTACTGCAAATGTGTTTGCAATCACTTAAGGGA GAACTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_1662#0      TCTGGAACGACGCGGACACACTGGTTACAAATCCGGACATCCCGTTGGAGATGATTTTGT 60
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      TCTCGGTGATTGGGCACAGTGATTTTGATGCTGCTCCTGATCTCATCCTGACGGAGGATT 120
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      TCAATGGTGTTAACGCTGGAGTATTCTTCATACGGGGCTCAAAGTGGAGTGAGAAGTTTC 180
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      TGGACACATGGTGGAACCTTACATCCTTCATACAATTTGGTTCCACAAAAAGTGGAGATA 240
consensus_1662#1      ----------------------------AAAAGAACATGGTTGCAGGA----TCCAAAAA 28
                                                   * * **  ***** **  *    *  * * *

consensus_1662#0      ATGCAGCATTGAAGCATCTTATAGATCACTTTTCACCTGAAGAAATGCAAGAACATGTTC 300
consensus_1662#1      AATCCGCAACGTGGC--TTTAATGTTGAATT---GCCTGATGCACTTGGGAGAC---CCC 80
                      *  * ***  *  **   ***  * * * **    ***** * * *      **     *

consensus_1662#0      GGATTGCAAAAATGCAGTGCTTATTTAATTCCTATCCTTGGAGACCCACATGGAAATCAA 360
consensus_1662#1      ACATTGGGAAAATCCA----------AATGGCTATGCC-------------GCACTTTGA 117
                        ****  ***** **          ***  **** *              * *  *  *

consensus_1662#0      TGCATCGCCTTATTTTCCATCTTTCTACTACATGGAAAGGGGTTTATTCA-GATGG-AGA 418
consensus_1662#1      TGTGT-GCCCAATGCTGTGTGCTACT--CACAATGGAAAGGGTTTATTCAAGATGGGAGA 174
                      **  * ***  **  *   *  * **   ***  * ** *********** ***** ***

consensus_1662#0      CTTTATGG-TTCATTTC-GCTGGCC-TAGATGACAAGATTGGTTGGATAAATAAGATTCT 475
consensus_1662#1      CTTTATGGGTTCATTTCAGCTGGCCCTAGATGACAAGCTTGTTGGGATAAATAAGATTCT 234
                      ******** ******** ******* *********** *** * ****************

consensus_1662#0      TAGGGAGAGAAGATTTCTCA-GATG-ATTAGTTTTACTTCAA-----TTTTTCATCAACT 528
consensus_1662#1      TAGGGAGAGAAGATTTCTCAAGATGGATTAGTTTTACTGCAAATGTGTTTGCAATCACTT 294
                      ******************** **** ************ ***     ***   ****  *

consensus_1662#0      TAAGGAGAACTAGAGAGAATGCAAAAAGTTTGGTTGATCTGTAAAGTGCATGAGTTGCTG 588
consensus_1662#1      AAGGGAGAACTG------------------------------------------------ 306
                       * ********                                                 

consensus_1662#0      TTTGATGTGTATAGAATGACATTTGTTCGTTAGCGAAATACAGTTCTGCTACTAATTTCA 648
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      AAGTTTTTCATTATCTTTGCAGAATGAACTATTGATCAGCAGAGGCAGCTAGTTGCCTGA 708
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      TATTTCCTAATCCGTGGTGTGGTACCTTATTGTTGCAGTTACCATCCGCTGGTAATTAAC 768
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      CCTTATGGTTCTGCAGGCTGGACTTGTCCACCAGCTCGGTGCCTTTTCTGTTCAAGGTTT 828
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      TAGAACAACCATTGACTTGGGAAGTATACTAGTCTGTTCCAGGGCTGTTCTGTCCAGGAG 888
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      TCGGGAACAGAAAATTGAATTACGGAGTAACCTATTCGTTGTAAACAAGAAAGGTGGCAT 948
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      GGACTCGTCTACAATATCAGGGGCGAAGCCTTCACAGGGACACATGGGTTTAGGGTTCTG 1008
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      GCGACGCCCGGGCGATCGGGTGGCGGCGGCCTGCACTCAAACTTTGCGATGGTTTTGGAT 1068
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      GGGGTTCATCCCCGATCTGCTCTGGATGTCTGCAGGGGTTCCGCCTGCTCGATCCTCTTC 1128
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      GGTTTTGGGTAAAGATCAGGGTTTTGGAATAGATGTTGAATTAGGGTTTGTTCTGCAATC 1188
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      ACCGTGGGGCAGAGGAAGTCGTCTACCCTGGGTAATTCCGTGGGGATATACAAGCCCTAG 1248
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      GTTTCCAAACCAGAATCGGATTTGTTCTAGTGGTTTCCAATCTGTTATTCCTCGTTATGG 1308
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      TCTAGGTCATGATCTGTGGTGTTGCCTTTGGTATGATCTCGTGAAAGATTGGGACTCGGA 1368
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      GAGGCAACCCTTTATAAGGAACGATCAGGGAGGGCTGAAGGCAGTATTTTCACAAGATCC 1428
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      AAAGAGAACAGCGTCAAGGTCTCGTTCACCCCTGTTTCGTGGTCAAGATCTCCAGATCCA 1488
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      ATCTATGGTGTCTTCCATAGGTGGGGGCGATAAAGGGATCATCAATGCGATGATTACCCG 1548
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      CCCGAAGCCGAATGAGGATGCCTTGTTGAGTCTGTCAGATCAAGGGTTAGGCTTGGAGTT 1608
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      GGCGGCGACGAATCCTGCTGGGAGTAATCTGCTGGGAGGAAATACTCACATGGAGGCGGC 1668
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      ACTGTCCCAGGGGAATCAGAAGTTAGGACCTCGCAGGGAGGAGGAATCAAGCAGTCAGTC 1728
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      AAGAGGACCTGAAGCCTGTACTGTGGGAGAGATCGAAACAGATGAGGAAGATGTGATAGA 1788
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      GGAATATAGAGGATGAAGAGATCAAGCAGGATGGTATCTGGACCGTGCTTGCTCGGTTCT 1848
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      ACTCTCTACGTAATCCAAATCAAACTGCGCTTTTTGAAGATATGAGTAGAGCATGGCGGC 1908
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      TGCGTTCTGATATGACACACAAATCCCTGAGAGACAACCTGTTCATCATCACCTTTAGCA 1968
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      CAGAGGGTGATTACAAGTTCGTCCTGCAAGGAGGTCCCTGGTTGCATAAGGGAGATGCCC 2028
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      TGCTGGTTGCGGCATTTGACGGTCTAACCTGCCCTTCAAAAATCCCATTGGAGACAGTAC 2088
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      CGATCTGGATTCGTATCTACGATCTCCCCTTGGTTTTAATGACCAAAGCCAGAGGCCAGC 2148
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      TATATGGGAGCAGATTTGGTTGTGTTCGGGAGGTGGATGTGGAAGAAGACGGAAGGAATA 2208
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      GACATGACTTCTTTAGGATCAGGGTGGACCTGCCTGTCAAGAAACCCCTGAAACCAAAGA 2268
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      TTGCAATTAAAATGCATGTTCAAGGCAAGGAGGAGACTTCTTTAGGATCAGGGTGGACCT 2328
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      GCCTGTCAAGAAACCCCCGAAACCAAAGATTGCAATTAAAATGCATGTTCAAGGCAAGGA 2388
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      GGAGATTAAGAGATTTGATGTTCGCTATGAAAGGATCCCATACTTCTGCTTTATGTGTGG 2448
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      GTATATCGGCCACTCAGATAAGGAATGTGATAAGAAGGGTGCAAATAATGAGGTACCGTT 2508
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      CCAATTCTCGGCTGAACTGAGATGCTCTCCTCTTAAGCCTTTTGAGAGGAAGATTGGCAA 2568
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      GGTTAAAGCTACTCAGAAGCCCGAGGTCTCTCACAGATTGGTCTTCCGTGGTGCTGGAAG 2628
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      TGCAAACTCATCATCATCCAAGAGACCTCAAGAAGAACATTGGGATGAAGCTATCCCCCC 2688
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      GAGAGTGGATGCCCGTGATGGTTTTGAGACCAAGGAGGAGGAAGGGGATATGTTGGTGGA 2748
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      TGAACAGTTGGCCAGCCACGCTAGAAAACTCAATGTTTCTGCAGAAGTTGAGCGAACAGG 2808
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      GGGCAACAGAGGTAATAAATCCTCAGAGCCTAGCTCAAAGGGGGAGATGATACCGGCGAT 2868
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      GGCTAATTTGCAGCAAGCTGCATCTTTTGGAGAAGTCTCAACAAAAGATGTCTTATCAGC 2928
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      CCAAAAGAGGAGTACACCAGCACAAAGTGGACTCAAGAAGACAGGCAGGGTTCAACAGGC 2988
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      GTTGATTGAGCTAGGACAGGAGCCAGCGGCTATGCTGAAACAGGCGCCGGAGATAGGTTT 3048
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      TCAAGGCAGGGAGTTCAAAAGATTCAAGAAGACAGACAGGGAAGCTTTGGTGGGGGGAGA 3108
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      GTCGGAAGCAACCAGCCCTGGGGCTGCTGGTAAACTGGCGGGTTCCATGAAGGGAACTCG 3168
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      CCAGGAGCAATAAGTTGTTTAAGTTGGAACTGTCGTGGCATTGGGAACCCCACGACAGTT 3228
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      TGGGATCTTTGTGCCTTGGTCGGGAGGCTGGTTCCAAAATTGTGTTTCTTTGTGAGACGA 3288
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      GACAAAAGTTTGAAAAAGTTCGTCGGCTTCGGAATAGATTAGGGTTAAAAGGGTGTGCTA 3348
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      GTGTAAGTTGTGAAGGTTTAAGTGGTGGGTTGGCTTTGTTTTGGGATGAGTCTGTTTATG 3408
consensus_1662#1      ------------------------------------------------------------
                                                                                  

consensus_1662#0      TTGAAATAAAAGGAATGAATGAGAGATAC 3437
consensus_1662#1      -----------------------------
                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)