cluster # 16625

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Oryza sativa
cluster # 16625 cluster # 16625 Sequences # 37 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_16625#0 length = 1525 sequences # 17
consensus_16625#1 length = 1007 sequences # 6

consensus_16625#2 length = 539 sequences # 11
consensus_16625#3 length = 327 sequences # 2
consensus_16625#4 length = 238 sequences # 1

consensusID : consensus_16625#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 1525
fasta sequence

                              [AGATCGCCCTCACCCTCCAATTCCAATCCCTCCCAAGAACTAGCTGATCACGACGAGCAGCTAGTCCACTGCTACTGCGATCGATCGGTTGCAAAGTTAATTAATTAGTGGCGATCGATCGATCATGGGGAGGGTTATTAGCAGCTGGAGGGTTCTTGCGGTGGTGGCTGCTTTGATGGCCATGGCGGCGGTGGAGCTGTGCGCCGCGATACCGTTCGACGAGAGGGATTTGGAGTCCGACGAGGCGCTGTGGGATCTGTACGAGCGGTGGCAGGAGCACCACCACGTGCCGCGCCACCACGGCGAGAAGCACCGCCGG-TTCGG-GC-G-TTCAAGGACAACGTG-AGGTACATCCACGAGCACAACAAGC-GC-GC-G--CCGG-GGCTACCG-CT-CC-GC-TCAACCGCTTCGGCGACATGGGCAGAGAGGAGTTCCGCGCCACGTTCGCCGGGTCCCACGCCAACNACCTCCGCCGCGACGGCCTCGCCGCGCCGCCGCTCCCGGGGTTCATGTACGAGGGCGTCCGCGACCTCCCCCGCGCCGTCGACTGGCGCCGCAAGGGCGCGGTCACCGGCGTCAAGGACCAGGGCAAGTGCGGCAGCTGCTGGGCGTTCTCCACGGTGGTGTCCGTGGAGGGCATCAACGCGATCCGGACGGGGCGGCTGGTGTCGCTGTCGGAGCAGGAGCTGATCGACTGCGACACGGCGGACAACAGCGGCTGCCAGGGCGGGCTCATGGAGAACGCGTTCGAGTACATCAAGCACAGCGGCGGCATCACCACCGAGTCCGCCTACCCGTACCGCGCCGCCAACGGAACGTGCGACGCCGTCCGCGCGC-GCG-GCGGGCTG-GTGGTGATCGACGGGCACCAGAACGTGCCGGCCAACAGCGAGGCCGCGCTCGCCAAGGCCGTCGCCAACCAGCCCGTCTCCGTCGCCATCGACGCCGGCGACCAGTCCTTCCAGTTCTACTCCGACGGCGTCTTCGCCGGC-GACTGCGGCACCGACCTCGACCACGGCGTCGCGGTGGTCGGCTACGGCGAGACCAACGACGGCACGGAGTACTGGATCGTCAAGAACTCGTGGGGCACAGCCTGGGGCGAGGGCGGCTACATCCGGATGCAGCGCGACTCCGGCTACGACGGCGGCCTCTGCGGCATCGCCATGGAAGCCTCCTACCCCGTCAAGTTCTCGCCAAATCGTGTCACGCCAAGGCGCGCCCTTGGGCCAAAGG-AAACCCAGTGA-TCGAGCCGGCGCCATC-TCCGCCGTACACATGCCCGCCTACGAGCCTGGATCAACGGCTCTGGTCGCGTCTCCTCCTCCAGCTTGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTGCCTTGTGTTTATGTAATTCGTGTGAGGCGATCAGGGAAAAGAATTACCTGAAATCGTCTAAGTTACTAGTGTTATTTCGTGTGTGCTAAATAAGTTTTAGATGTGAGGTGAGGTCGATCGATCTATCATGTGGTGTTCTTCGTGGCACCGGAAATATATAAGAAGGTTGT]

[+] EMBL C97796               [AGATCGCCCTCACCCTCCAATTCCAATCCCTCCCAAGAACTAGCTGATCACGACGAGCAGCTAGTCCACTGCTACTGCNATCGATCGGTTGCAAAGTTAATTAATTAGTGGCGATCGATCGATCATGGGGAGGGTTATTAGCAGCTGGAGGGTTCTTGCGGTGGTGGCTGCTTTAATGGCCATGGCGGCGGTGGAGCTGTGCGCCGCGATACCGTTCGACGAGAGGGATTTTGAGTCCGACGAGGCGCTGTGGGATCTNTACGAGCGGTTGCAAGAGCACCACCACGTNCCGTG CACCACGGCGAGAAG ACCGCCGG TTCGG GC G TTCAA GNCAACGTG AGGTACAT CACGAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL C26357               [                         ATCCCTCCCAAGAACTAGCTGATCACGACGAGCAGCTAGTCCACTGCTACTGCGATCGATCGGTTGCAAAGTTAATTAATTAGTGGCGATCGATCGATCATGGGGAGGGTTATTAGCAGCTGGAGGGTTCTTGCGGTGGTGGCTGCTTTGATGGCCATNGCGGCGGTGGAGCTGTGCGCCGCGATACCGTTCGACGAGAGGGATTTGGAGTCCGACGAGGCGCTGTGGGATCTGTACGAGCNGTGGCAGGAGCACCACCACGTGCCGCGTCACCACGGCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL C26130               [                          TCCCTCCCAAGAACTAGCTGATCACGACGAGCAGCTAGTCCACTGCTACTGCGATCGATCGGTTGCAAAGTTAATTAATTAGTGGCGATCGATCGATCATGGGGAGGGTTATTAGCAGCTGGAGGGTTCTTGCGGTGGTNGCTGCTTTNATGGCCATGGCGGCGGTGGAGCTGTGCGCCGCGATACCGTTCGACGAGAGGGATTTTGAGTCCGACGAGGCGCTGTGGGATCTGTACGAGCGGTNGCAGGAGCACCACCACGTGCCGCGCCACCACGGCGAGAAGCACCTCCGG TTCGC CG G TTCAAGGACAACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL OSC104841            [                            CCTCCCAAGAACTAGCTGATCACGACGAGCAGCTAGTCCACTGCTACTGNGATCGATCGGTTGCAAAGTTAATTAATTAGTGGCGATCGATCGATCATGGGGAGGGTTATTAGCAGCTGGAGGGTTCTTGCGGTGGTGGCTGCTTTGATGGCCATGGCGGCGGTGGAGCTGTGCGCCGCGATACCGTTCGACGAGAGGGATTTGGAGTCCGACGAGGCGCTGTGGGATCTGTACGAGCGGTGGCAGGAGCACCACCACGTGCCGCGCCACCACGGCGAGAAGCACCGCCGG TTCGG GC G TTCAAGGACAACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU075580             [                               CCCAAGANCTAGCTGATCACGACGAGCAGCTAGTCCACTGCTACTGCGATCGATCGGTTGCAAAGTTAATTAATTAGTGGCGATCNATCGATCATGGGGAGGGTTATTAGCAGCTGGAGGGTTCTTGCGGTGGTGGCTGCTTTGATNGCCATNGCGGCGGTGGAGCTGTGCGCCGCGATACCGTTCGACGNGAGGGATTTNGAGTCCGACGNGGCGCTGTGGGATCTGTACGAGCGGTGGCAGGAGCACCACCACGTGCCGCGCCACCACGGCGAGAAGCACCGCCGG TTCGG GC G TTCAAGGACAACGTG AGGTTCATCCACGAGCACAACAAACGGN GC GGNCCGG GGTTACCG CT tc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL OSC104411            [                               CCCAAGAACTAGCTGATCACGACGAGCAGCTAGTCCACTGCTACTGCGATCGATCGGTTGCAAAGTTAATTAATTAGTGGCGATCGATCGATCATGGGGAGGGTTATTAGCAGCTGGAGGGTTCTTGCGGTGGTGGCTGCTTTGATGGCCATGGCGGCGGTGGAGCTGTGCGCCGCGATACCGTTCGACGAGAGGGATTTGGAGTCCGACGAGGCGCTGTGGGATCTGTACGAGCGGTGGCAGGAGCACCACCACGTGCCGCGCCACCACGGCGAGAAGCACCGCCGG TTCGG GC G TTCAAGGACAACGTG AGGTACATCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL C97051               [                                CCAAGANCTAGCTGATCACGACGAGCAGCTAGTCCACTGCTACTGNGATCGATCGGTTGCAAAGTTAATTAATTAGTGGCGATCGATCGATCATGGGGAGGGTTATTAGCAGCTGGAGGGTTCTTGCGGTGGTGGCTGCTTTNATGGCCATGGCGGCGGTGGAGCTGTNCGCCGCGATACCGTTCGACGAGAGGGATTTGGAGTCCGACGAGGCGCTGTGGGATCTGTACGAGCGGTGGCAGGAGCACCACCACGTGCCGCGCCACNACGGCGAGAAGCACCGTCGGTTTCGG GN GTTTCAAGGACAACNTG AGGTACATCCACGATNACAACAAGC TC Gncggt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL C26077               [                                CCAAGAACTAGCTGATCACGACGAGCAGCTAGTCCACTGCTACTGCGATCGATCGGTTGCAAAGTTAATTAATTAGTGGCGATCGATCGATCATGGGGAGGGTTATTAGCAGCTGGAGGGTTCTTGCGGTGGTNGCTGCTTTNATGGCCATGGCGGCGGTGGAGCTGTGCNNNGCGATACCGTTCGACGAGAGGGATTTGGAGTCCGACGAGGCGCTGTGGGATCTNTACGAGCGGTGGCAGGAGCACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL C25962               [                                      nCTAGCTGATCACGACGAGCAGCTAGTCCACTGCTACTGCGATCGATCGGTTGCAAAGTTAATTAATTAGTGGCGATCGATCGATCATGGGGAGGGTTATTAGCAGCTGGAGGGTTCTTGCGGTGGTGGCTGCTTTGATGGCCATGGCGGCGGTGGAGCTGTGCGCCGCGATACCGTTCGACGAGAGGGATTTGGAGTCCGACGAGGCGCTGTGGGATCTGTACGAGCGGTGGCAGGAGCACCACCACGTGCCGCGCCACCACGGCGAGAAGCACCGCCGG TTCGG GC G TTCAAGGACAACGTG AGGTACATCCACGAGCACAACAAGC GCGGCGG  CCGG GGCTACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL OSC103191            [                                         AGCTGATCACGACGAGCAGCTAGTCCACTGCTACTGCGATCGATCGGTTGCAAAGTTAATTAATTAGTGNCGATCGATCGTTCATGGGGNGAGTTATTAGCAGCTGGAGGGTTCTTGCGGTGGTGGCTGCTTTGATNGCCANGGCGGCGGTGGAGCTGTGCGCCGCGATACCGTTCGACGAGAGGGATTTGGAGTCCGACGANGCGCTGTNGGATCTGTACGAGCGNTGGCANGAGCACCACCACGTGCCGCGCCACCACGGCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL OSC103031            [                                          GCTGATCANGACGAGCAGCTAGTCCACTGCTACTGCGATCGATCGGTNGCAAAGTTAATTAATTAGTNGCGATCGATCGATCATGGGGAGGGTTATTAGCAGCTGGAGGGTTCTTGCGATGGTGGCTNCTTTAATGGCCATGGCGGCGGTGGAGCTGTGCGCCGCGATACCGTTCGACGAGAGGGATTTGGAGTCCGACGAGGCGCTGTGGGATCTATACGAGCGNTGGCAGGAGCACCACCAAGTGCCGCGACACCACGGCGAGAAGCACCGCCGG TTCGG GCGG TTCAAGGACAACGTG AGGTACATCCACGAGCACAACAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL C26198               [                                             GATCACGACGAGCAGCTAGTCCACTGCTACTGCGATCGATCGGTTGCAAAGTTAATTAATTAGTGGCGATCGATCGATCATGGGGAGGGTTATTAGCAGCTGGAGGGTTCTTGCGGTGGTGGCTGCTTTGATGGCCATGGCGGCGGTGGAGCTGTGCGCCGCGATACCGTTCGACGAGAGGGATTTGGAGTCCGACGAGGCGCTGTGGGATCTGTACGAGCGGTNGCAGGAGCACCACCACGTGCCGCGCCACCACGGCGAGAAGCACCGCCGG TTCGG CCNGTTTCAAGGACAACGTGAAGGTACATCCACGAGCACANCAAGC GCGGCNG  CCGGTGGCTACCGCCT NC GCTTCAACCGCTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL OSD415               [                                                                                                                  TCGATCGATCATGGGGAGGGTTATTAGCAGCTGGAGGGTTCTTGCGGTGGTGGCTGCTTTGATGGCCATGGCGGCGGTGGAGCTGTGCGCCGCGATACCGTTCGACGAGAGGGATTTGGAGTCCGACGAGGCGCTGTGGGATCTGTACGAGCGGTGGCAGGAGCACCACCACGTGCCGCGCCACCACGGCGAGAAGCACCGCCGG TTCGGCGC G TTCAAGGACAACGTG AGGTACATCCACGAGCACAACAAGC GC GC G  CC G GGCTA CG CT CC GC TCAACCGCTTCGGCGACATGGGCAGAGAGGAGTTCCGCGCCACGTTCGCCGGGTCCCACGCCAACGACCTCCGCCGCGACGGCCTCGCCGCGCCGCCGCTCCCGGGGTTCATGTACGAGGGCGTCCGCGACCTCCCCCGCGCCGTCGACTGGCGCCGCAAGGGCGCGGTCACCGGCGTCAAGGACCAGGGCAAGTGCGGCAGCTGCTGGGCGTTCTCCACGGTGGTGTCCGTGGAGGGCATCAACGCGATCCGGACGGGGCGGCTGGTGTCGCTGTCGGAGCAGGAGCTGATCGACTGCGACACGGCGGACAACAGCGGCTGCCAGGGCGGGCTCATGGAGAACGCGTTCGAGTACATCAAGCACAGCGGCGGCATCACCACCGAGTCCGCCTACCCGTACCGCGCCGCCAACGGAACGTGCGACGCCGTCCGCGCGC GCG GCGGGCTG GTGGTGATCGACGGGCACCAGAACGTGCCGGCCAACAGCGAGGCCGCGCTCGCCAAGGCCGTCGCCAACCAGCCCGTCTCCGTCGCCATCGACGCCGGCGACCAGTCCTTCCAGTTCTACTCCGACGGCGTCTTCGCCGGC GACTGCGGCACCGACCTCGACCACGGCGTCGCGGTGGTCGGCTACGGCGAGACCAACGACGGCACGGAGTACTGGATCGTCAAGAACTCGTGGGGCACAGCCTGGGGCGAGGGCGGCTACATCCGGATGCAGCGCGACTCCGGCTACGACGGCGGCCTCTGCGGCATCGCCATGGAAGCCTCCTACCCCGTCAAGTTCTCGCCAAATCGTGTCACGCCAAGGCGCGCCCTTGGGCCAAAGG AAACCCAGTGA TCGAGCCGGCGCCATC TCCGCCGTACACATGCCCGCCTACGAGCCTGGATCAACGGCTCTGGTCGCGTCTCCTCCTCCAGCTTGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTGCCTTGTGTTTATGTAATTCGTGTGAGGCGATCAGGGAAAAGAATTACCTGAAATCGTCTAAGTTACTAGTGTTATTTCGTGTGTGCTAAATAAGTTTTAGATGTGAGGTGAGGTCGATCGATCTATCATGTGGTGTTCTTCGTGGCACCGGAAATATATAAGAAGGTTGT]
[+] EMBL C26319               [                                                                                                                              GGGGAGGGTTATTAGCAGCTGGAGGGTTCTTGCGGTGGTGGCTGCTTTGATGGCCATGGCGGCGGTGGAGCTGTGCGCCGCGATACCGTTCGACGAGAGGGATTTGGAGTCCGACGAGGCGCTGTGGGATCTGTACGAGCGGTGGCAGGAGCACCACCACGTGCCGCGCCACCACGGCGAGAAGCACCGCCGG TTCGGNGC G TTCAAGGACAACGTG AGGTACATCCACGAGCACAACAAGC GCGGCGG  CCGG GGCTACCGCCTNCG GC TCAACCGCTTCGGCGACATGGGCAGAGAGGAGTTCCGCGCCACGTTCGCCGGGTCCCACGGCAACNACCTTCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL C27328               [                                                                                                                                                                                                                                                                               CAGGAGCACCACCACGTGCCGCGCCACCACGGCGAGAAGCACCGCCGG TTCGG GC G TTCAAGGACAACGTG AGGTACATCCACGAGCACAACAAGC GCGGCGG  CCGG GGCTACCGCCT CCGGC TCAACCGCTTCGGCGACATGGGCAGAGAGGAGTTCCGCGCCACGTTCGCCGGGTCCCACGCCAACNACCTCCGCCGCGACGGCCTCGCCGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL C96846               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACAGCGGCTGCCAGGGCGGGCTCATGGAGAACGCGTTCGAGTACATCAAGCACAGCGGCGGCATCACCACCGAGTCCGCCTACCCGTACCGCGCCGCCAACGGAACGTGCGACGCCGTCCGCGCGCGGCGNNCNGCTTGNGTGGTGATCGACGGGCACCAGAACGTGCCGGCCAACAGCNAGGCCGCGCTCGCCAAGGCCGTCGCCAACCAGCCCGTCTCCGTCGCCATCGACGCCGGCGACCAGTCCTTCCAGTTCTACTCCGACGGCGTCTTCG CGGCNAACTGCGGCACCGACCTCGACCACGGCGTCGCGGTGGTCGGCTACGGCGAGACCAACGACGGCANGGAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL C96856               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CAGAACGTGNNGGCCAACAGCGAGGCCGNG TCGCCAAGGCCGTCGCCAACCAGCCCGTCTCCGTCGCCATCGACGCCGGCGACCAGTCCTTCCAGTTCTACTCCGACGGCGTCTTCGCCGGC GACTGCGGCACCGACCTNGACCACGGNGTCGCGGTGGTCGGCTACGGCGAGACCAACGACGGCACGGAGTACTGGATCGTNAAGAACTCGTGGGGCACAGCCTGGGGCGAGGGCGGCTACATCCGGATGCAGCGCGACTCCGGCTACGACGGCGGCCTCTGCGGCATCGCCATGGAAGCNTCCTACCCCGTCAAGTTCTCGCCAAATCGTGTCACGCCAAGGCGCGCCCTTGGGGCAAAGGNAAACCCAGTGATTCGAGCCGGCGCCATCTTCCG                                                                                                                                                                                                                                                                                 ]




>consensus_16625#0
AGATCGCCCTCACCCTCCAATTCCAATCCCTCCCAAGAACTAGCTGATCACGACGAGCAG
CTAGTCCACTGCTACTGCGATCGATCGGTTGCAAAGTTAATTAATTAGTGGCGATCGATC
GATCATGGGGAGGGTTATTAGCAGCTGGAGGGTTCTTGCGGTGGTGGCTGCTTTGATGGC
CATGGCGGCGGTGGAGCTGTGCGCCGCGATACCGTTCGACGAGAGGGATTTGGAGTCCGA
CGAGGCGCTGTGGGATCTGTACGAGCGGTGGCAGGAGCACCACCACGTGCCGCGCCACCA
CGGCGAGAAGCACCGCCGGTTCGGGCGTTCAAGGACAACGTGAGGTACATCCACGAGCAC
AACAAGCGCGCGCCGGGGCTACCGCTCCGCTCAACCGCTTCGGCGACATGGGCAGAGAGG
AGTTCCGCGCCACGTTCGCCGGGTCCCACGCCAACNACCTCCGCCGCGACGGCCTCGCCG
CGCCGCCGCTCCCGGGGTTCATGTACGAGGGCGTCCGCGACCTCCCCCGCGCCGTCGACT
GGCGCCGCAAGGGCGCGGTCACCGGCGTCAAGGACCAGGGCAAGTGCGGCAGCTGCTGGG
CGTTCTCCACGGTGGTGTCCGTGGAGGGCATCAACGCGATCCGGACGGGGCGGCTGGTGT
CGCTGTCGGAGCAGGAGCTGATCGACTGCGACACGGCGGACAACAGCGGCTGCCAGGGCG
GGCTCATGGAGAACGCGTTCGAGTACATCAAGCACAGCGGCGGCATCACCACCGAGTCCG
CCTACCCGTACCGCGCCGCCAACGGAACGTGCGACGCCGTCCGCGCGCGCGGCGGGCTGG
TGGTGATCGACGGGCACCAGAACGTGCCGGCCAACAGCGAGGCCGCGCTCGCCAAGGCCG
TCGCCAACCAGCCCGTCTCCGTCGCCATCGACGCCGGCGACCAGTCCTTCCAGTTCTACT
CCGACGGCGTCTTCGCCGGCGACTGCGGCACCGACCTCGACCACGGCGTCGCGGTGGTCG
GCTACGGCGAGACCAACGACGGCACGGAGTACTGGATCGTCAAGAACTCGTGGGGCACAG
CCTGGGGCGAGGGCGGCTACATCCGGATGCAGCGCGACTCCGGCTACGACGGCGGCCTCT
GCGGCATCGCCATGGAAGCCTCCTACCCCGTCAAGTTCTCGCCAAATCGTGTCACGCCAA
GGCGCGCCCTTGGGCCAAAGGAAACCCAGTGATCGAGCCGGCGCCATCTCCGCCGTACAC
ATGCCCGCCTACGAGCCTGGATCAACGGCTCTGGTCGCGTCTCCTCCTCCAGCTTGCAAA
ATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTGCCTTGTGTTTATGTAATTCGTGTGA
GGCGATCAGGGAAAAGAATTACCTGAAATCGTCTAAGTTACTAGTGTTATTTCGTGTGTG
CTAAATAAGTTTTAGATGTGAGGTGAGGTCGATCGATCTATCATGTGGTGTTCTTCGTGG
CACCGGAAATATATAAGAAGGTTGT

consensusID : consensus_16625#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1007
fasta sequence

                              [ACGGTGGTGTCCGTGGAGGGCATCAACGCGATCCGGACGGGGCGGCTGGTGTCGCTGTCGGAGCAGGAGCTGATCGACTGCGACACGGCGGACAACAGCGGCTGCCAGGGCGGGCTCATGGAGAACGCGTTCGAGTACATCAAGCACAGCGGCGGCATCACCACCGAGTCCGCCTACCCGTACCGCGCCGCCAACGGAACGTGCGACGCCGTCCGCGCGCGGCGCGCGCCGNTGGTGGTGATCGACGGGCACCAGAACGTGCCGGCCAACAGCGAGGCCGCGCTCGCCAAGGCCGTCGCCAACCAGCCCGTCTCC-TCGCCATCGACGCCGGCGACCAGTCCTTCCAGTTCTACTCCGAC-GGCGTC-TTCGCC-GGCGACTGCGGCCACC-GACCTCGACCAC-GGCGTCGCGGTGGTC-GGCTACGGCGAGACCAACGACGGCACGGAGTACTGGATCGTCAAGAACTCGTGGGGCACAGCCTGGGGCGAGGGCGGCTACATCCGGATGCAGCGCGACTCC-GGCTACGACGGCGGCCTCTGCGGCATCGCCATGGAAGCCTCCTACCCCGTCAAGTTCTCGCCAAATCGTGTCACGCCAAGGCGCGCCCTTGGCGCCAAGGAAACCCAGTGATCGAGCCGGCGCCATCTCCGCCGTACACGTGCCCGCCTACGAGCCTGGATCAACGGCTCTGGTCGCGTCTCCTCCTCCAGCTTGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTGCCTTGTGTTTATGTAATTCGTGTGAGGCGATCAGGGAAAAGAATTACCTGAAATCGTCTAAGTTACTAGTGTTATTTCGTGTGTGCTAAATAAGTTTTAGATGTGAGGTGAGGTCGATCTATCATGTAATGTACTGAACTTATATGTGGTGTTCTTCGTGGCACCGGGAAATATATATAAGAAGGTTGTTGTTATGACTAAGGTTATGCCAAATTTCATCCAAAAAAGACTAAGGTTATGCCAAATTTCATCCAAAA]

[+] EMBL AU166714             [ACGGTGGTGTCCGTGGAGGGCATCAACGCGATCCGGACGGGGCGGCTGGTGTCGCTGTCGGAGCAGGAGCTGATCGACTGCGACACGGCGGACAACAGCGGCTGCCAGGGCGGGCTCATGGAGAACGCGTTCGAGTACATCAAGCACAGCGGCGGCATCACCACCGAGTCCGCCTACCCGTACCGCGCCGCCAACGGAACGTGCGACGCCGTCCGCGCGCGGCGCGCGCCGNTGGTGGTGATCGACGGGCACCAGAACGTGCCGGCCAACAGCGAGGCCGCGCTCGCCAAGGCCGTCGCCAACCAGCCCGTCTCCGTCGCCATCGACGCCGGCGACCAGTCCTTCCAGTTCTACTCCGAC GGCGTC TTCGCC GGCGACTGCGGCa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CA997922             [                                                                                                                                                           aggCACCACCGAGTCCGCCTACCCGTACCGCGCCGCCAACGGAACGTGCGACGCCGTCCGCGCGCGGCGCGCGCCGCTGGTGGTGATCGACGGGCACCAGAACGTGCCGGCCAACAGCGAGGCCGCGCTCGCCAAGGCCGTCGCCAACCAGCCCGTCTTC TTGTCATCGACTCCGGCGACCAGTCCTTCCAGTTCTACTCCGAC GGCGTC TTCGCC GGCGACTGCGG CACC GACCTCGACCAC GGCGTCGCGGTGGTC GGCTACGGCGAGACCAACGACGGCACGGAGTACTGGATCGTCAAGAACTCGTGGGGCACAGCCTGGGGCGAGGGCGGCTACATCCGGATGCAGCGCGACTCC GGCTACGACGGCGGCCTCTGCGGCATCGCCATGGAAGCCTCCTACCCCGTCAAGTTCTCGCCAAATCGTGTCACGCCAAGGCGCGCCCTTGGCGCCAAGGAAACCCAGTGATCGAGCCGGCGCCATCTTCGTCGTACACGTGCCCGCCTACGAGCCTGGATCAACGGCTCTGGTCGCGTCTCCTCCTCCAGC                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU092094             [                                                                                                                                                                                                                                                                                                                                                      TTCCAGTTCTACTCCGACGGGCGTCTTTCGCCGGGCGACTGCGGCCACCGGACNTCGACCACGGGCGTCGCGGTGGTCGGGCTACGGCGAGACCAACGACGGCACGGAGTACTGGATCGTCAAGAACTCGTGGGGCACAGCCTGGGGCGAGGGCGGCTACATCCGGATGCAGCGCGACTCCGGGCTACGACGGCGGCCTCTGCGGCATCGCCATGGAAGCCTCCTACCCCGTCAAGTTCTCGCCAAATCGTGTCACGCCAAGGCGCGCCCTTGGCGCCAAGGAAACCCAGTGATCGAGCCGGCGCCATCTCCGCCGTACACGTGCCCGCCTACGAGCCTGGATCAACGGCTCTGGTCGCGTCTCCTCCTCCAGCTTGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTGCCTTGTGTTTATGTAATTCGTGTGAGGCGATCAGGGAAAAGAATTACCTGAAATCGTCTAAGTTACTAGTGTTATTTCGTGTGTGCTAAATAAGTTTTAGATGTGAGGTGAGGTCGATCTATCATGTAATGTACTGAACTTATATGTGGTGTTCTTCGTGGCACCGGGAAATATATATAAGAAGGTTGTTGTTATGACTAAGGTTATGCCAAATTTCATCCAAAAAAGACTAAGGTTATGCCAAATTTCATCCAAAA]
[+] EMBL AU092283             [                                                                                                                                                                                                                                                                                                                                                                                       GGCGACTGCGGCCACC GACCTCGACCAC GGCGTCGCGGTGGTC GGCTACGGCGAGACCAACGACGGCACGGAGTACTGGATCGTCAAGAACTCGTGGGGCACAGCCTGGGGCGAGGGCGGCTANATCCGGATGCAGCGCGACTCC GGCTACGACGGCGGCCTCTGCGGNATCGCCATGGAAGCCTCCTACCCCGTCAAGTTCTCGCCAAATCGTGTCACGCCAAGGCG GCCCTTGGCGCCAAGGAAACCCAGTGATCGAGCCGGCGCGNTCTCCGCNGTGCACGTGCCCGCCTACGAGCCTGGATCAACGGCTCTGGTCGCGTCTCCTCCTCCAGCTTGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTGCCTTGTGTTTATGTAATTCGTGTGAGGCGATCAGGGAAAAGAATTACCTGAAATCGTCTAAGTTACTAGTGTTATTTCGTGTGTGCTAAATAAGTTTTAGATGTGAGGTGAGGTCGATCTATCATGTAATGTACTGAACTTATATGTGGTGTTCTTCGTGGCACCGGGAAATATATATAAGAAGGTTGTTGTTATGACTAAaaaa                                                    ]
[+] EMBL AU182034             [                                                                                                                                                                                                                                                                                                                                                                                                                                      gntnCGGCGAGACCAACGACGGCACGGAGTACTGGATCGTCAAGAACTCGTGGGGCACAGCCTGGGGCGAGGGCGGCTACATCCGGATGCAGCGCGACTCC GGCTACGACGGCGGCCTCTGCGGCATCGCCATGGAAGCCTCCTACCCCGTCAAGTTCTCGCCAAATCGTGTCACGCCAAGGCGCGCCCTTGGCGCCAAGGAAACCCAGTGATCGAGCCGGCGCCATCTCCGCCGTACACGTGCCCGCCTACGAGCCTGGATCAACGGCTCTGGTCGCGTCTCCTCCTCCAGCTTGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTGCCTTGTGTTTATGTAATTCGTGTGAGGCGATCAGGGAAAAGAATTACCTGAAATCGTCTAAGTTACTAGTGTTATTTCGTGTGTGCTAAAAAAaa                                                                                                                                                                  ]
[+] EMBL AU181370             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTGCGGCATCGCCATGGAAGCCTCCTACCCCGTCAAGTTCTCGCCAAATCGTGTCACGCCAAGGCGCGCCCTTGGCGCCAAGGAAACCCAGTGATCGAGCCGGCGCCATCTCCGCCGTACACGTGCCCGCCTACGAGCCTGGATCAACGGCTCTGGTCGCGTCTCCTCCTCCAGCTTGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTGCCTTGTGTTTATGTAATTCGTGTGAGGCGATCAGGGAAAAGAATTACCTGAAATCGTCTAAGTTACTAGTGTTATTTCGTGTGTGCTAAATAAGTTTTAGATGTGAGGTGAGGTCGATCTATCATGTAATGTACTGAACTTATATGTGGTGTTCTTCGTGGCACCGGGAAATATATATAAGAAGGTTGTTGTTATGACTAAGGTTATGCCAAAaaaaaaa                                     ]




>consensus_16625#1
ACGGTGGTGTCCGTGGAGGGCATCAACGCGATCCGGACGGGGCGGCTGGTGTCGCTGTCG
GAGCAGGAGCTGATCGACTGCGACACGGCGGACAACAGCGGCTGCCAGGGCGGGCTCATG
GAGAACGCGTTCGAGTACATCAAGCACAGCGGCGGCATCACCACCGAGTCCGCCTACCCG
TACCGCGCCGCCAACGGAACGTGCGACGCCGTCCGCGCGCGGCGCGCGCCGNTGGTGGTG
ATCGACGGGCACCAGAACGTGCCGGCCAACAGCGAGGCCGCGCTCGCCAAGGCCGTCGCC
AACCAGCCCGTCTCCTCGCCATCGACGCCGGCGACCAGTCCTTCCAGTTCTACTCCGACG
GCGTCTTCGCCGGCGACTGCGGCCACCGACCTCGACCACGGCGTCGCGGTGGTCGGCTAC
GGCGAGACCAACGACGGCACGGAGTACTGGATCGTCAAGAACTCGTGGGGCACAGCCTGG
GGCGAGGGCGGCTACATCCGGATGCAGCGCGACTCCGGCTACGACGGCGGCCTCTGCGGC
ATCGCCATGGAAGCCTCCTACCCCGTCAAGTTCTCGCCAAATCGTGTCACGCCAAGGCGC
GCCCTTGGCGCCAAGGAAACCCAGTGATCGAGCCGGCGCCATCTCCGCCGTACACGTGCC
CGCCTACGAGCCTGGATCAACGGCTCTGGTCGCGTCTCCTCCTCCAGCTTGCAAAATGGT
GCTATTATTGTTGCTGCTCTTTGTTAATTGCCTTGTGTTTATGTAATTCGTGTGAGGCGA
TCAGGGAAAAGAATTACCTGAAATCGTCTAAGTTACTAGTGTTATTTCGTGTGTGCTAAA
TAAGTTTTAGATGTGAGGTGAGGTCGATCTATCATGTAATGTACTGAACTTATATGTGGT
GTTCTTCGTGGCACCGGGAAATATATATAAGAAGGTTGTTGTTATGACTAAGGTTATGCC
AAATTTCATCCAAAAAAGACTAAGGTTATGCCAAATTTCATCCAAAA

consensusID : consensus_16625#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 539
fasta sequence

                              [CTGGATCGTCAAGAACTCGTGGGGCACAGCCTGGGGCGAGGGCGGCTACATCCGGATGCAGCGCGACTCC-GGCTACGACGGCGGCCTCTGC-GGCATCGCCATGGAAGCCTCCTACCCCGTCAAGTTCTCGCCAAATCGTGTCACGCCAAGGCGCGCCCTT-GGCG-CCAAGGAAACCCAGTGATCGAG-CCGGCGCCATCT-CCGCCGTACACGTGCCCGC-CTACGAGCCTGGATCAACGGCTCTGGTCGCGTCTCCTCCTCCAGCTTGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTGCCTTGTGTTTATGTAATTCGTGTGAGGCGATCAGGGAAAAGAATTACCTGAAATCGTCTAAGTTACTAGTGTTATTTC-GTGTGTGCTAAATAAGTTTTAGATGTGAGGTGAGGTCGATCTATCATGTAATGTACTGAACTTATATGTGGTGTTCTTCGTGGCACCGGGAAATATATATAAGAAGGTTGTTGTTATGACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CF323898             [CTGGATCGTCAAGAACTCGTGGGGCACAGCCTGGGGCGAGGGCGGCTACATCCGGATGCAGCGCGACTCC GGCTACGACGGCGGCCTCTGC GGCATCGCCATGGAAGCCTCCTACCCCGTCAAGTTCTCGCCAAATCGTGTCACGCCAAGGCGCGCCCTT GGCG CCAAGGAAACCCAGTGATCGAG CCGGCGCCATCT CCGCCGTACACGTGCCCGC CTACGAGCCTGGATCAACGGCTCTGGTCGCGTCTCCTCCTCCAGCTTGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTGCCTTGTGTTTATGTAATTCGTGTGAGGCGATCAGGGAAAAGAATTACCTGAAATCGTCTAAGTTACTAGTGTTATTTC GTGTGTGCTAAATAAGTTTTAGATGTGAGGTGAGGTCGATCTATCATGTAATGTACTGAACTTATATGTGGTGTTCTTCGTGGCACCGGGAAATATATATAAGAAGGTTGTTGTTATGACTAAAAAAAAAAAAAA                      ]
[+] EMBL AU108225             [                                        GGCGGCTANATCCGGATGCAGCGCGACTCC GGCTACGACGGCGGCNTCTGC GGCATCGCCATGGAAGCCTCCTACCCCGTNAAGTTCTCGCCAAATCGTGTCACGCCAAGGCGCGCCCTT GGCG CCAAGGAAACCCAGTGATCGAG CCGGCGCCATCT CCGCCGTACACGTGCCCGC CTACGAGCCTGGATCAACGGCTCTGGTCGCGTCTCCTCCTCCNGCTTGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTGCCTTGTGTTTATGTAATTCGTGTGAGGCGATCAGGGAAAAGAATTACCTGAAATCGTCTAAGTTACTAGTGTTATTTC GTGTGTGCTAAATAAGTTTTAGATGTGAGGTGAGGTCGATCTATCATGTAATGTACTGAACTTATATGTGGTGTTCTTCGTGGCACCGGGAAATATATATAAGAAGGTTGTTGTTATGACTAAAAAAAAAAAA                        ]
[+] EMBL AU181403             [                                                                GACTCCGGGCTACGACGGCGGCCTCTGCGGGCATCGCCATGGAAGCCTCCTACCCCGTCAAGTTCTCGCCAAATCGTGTCACGCCAAGGCGCGCCCTT GGCG CCAAGGAAACCCAGTGATCGAG CCGGCGCCATCT CCGCCGTACACGTGCCCGC CTACGAGCCTGGATCAACGGCTCTGGTCGCGTCTCCTCCTCCAGCTTGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTGCCTTGTGTTTATGTAATTCGTGTGAGGCGATCAGGGAAAAGAATTACCTGAAATCGTCTAAGTTACTAGTGTTATTTC GTGTGTGCTAAATAAGTTTTAGATGTGAGGTGAGGTCGATCTATCATGTAATGTACTGAACTTATATGTGGTGTTCTTCGTGGCACCGGGAAATATATATAAGAAGGTTGTTGTTA  A  AAAAAA                              ]
[+] EMBL AU166713             [                                                                     C GGCTACGACGGCGGCCTCTGC GGCATCGCCATGGAAGCCTCCTACCCCGTCAAGTTCTCGCCAAATCGTGTCACGCCAAGGCGCGCCCTT GGCG CCAAGGAAACCCAGTGATCGAG CCGGCGCCATCT CCGCCGTACACGTGCCCGC CTACGAGCCTGGATCAACGGCTCTGGTCGCGTCTCCTCCTCCAGCTTGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTGCCTTGTGTTTATGTAATTCGTGTGAGGCGATCAGGGAAAAGAATTACCTGAAATCGTCTAAGTTACTAGTGTTATTTCNGTGTGTGCTAAATAAGTTTTAGATGTGAGGTGAGGTCGATCTATCATGTAATGTACTGAACTTATATGTGGTGTTCTTCGTGGCACCGGGAAATATATATAAGAAGGTTGTTGTTATGACTAAAAAAAA                            ]
[+] EMBL AU181686             [                                                                     C GGCTACGACGGCGGCCTCTGC GGCATCGCCATGGAAGCCTCCTACCCCGTCAAGTTCTCGCCAAATCGTGTCACGCCAAGGCGCGCCCTT GGCG CCAAGGAAACCCAGTGATCGAG CCGGCGCCATCT CCGCCGTACACGTGCCCGC CTACGAGCCTGGATCAACGGCTCTGGTCGCGTCTCCTCCTCCAGCTTGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTGCCTTGTGTTTATGTAATTCGTGTGAGGCGATCAGGGAAAAGAATTACCTGAAATCGTCTAAGTTACTAGTGTTATTTC GTGTGTGCTAAATAAGTTTTAGATGTGAGGTGAGGTCGATCTATCATGTAATGTACTGAACTTATATGTGGTGTTCTTCGTGGCACCGGGAAATATATATAAGAAGGTTGTTGTTAaaaaa                                    ]
[+] EMBL AU181203             [                                                                                              GCATCNCCATGGAAGCCTCCTACCCCGTCAAGTTCTCGCCAAATCGTGTCACGCCAAGGCGCGCCCTT GGCG CCAAGGAAACCCAGTGATCGAG CCGGCGCCATCT CCGCCGTACACGTGCCCGC CTACGAGCCTGGATCAACGGCTCTGGTCGCGTCTCCTCCTCCAGCTTGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTGCCTTGTGTTTATGTAATTCGTGTGAGGCGATCAGGGAAAAGAATTACCTGAAATCGTCTAAGTTACTAGTGTTATTTC GTGTGTGCTAAATAAGTTTTANATGTGAGGTGAGGTCGATCTATCATGTAATGTACTGAACTTATATGTGGTGTTCTTCGTGGCNCCGGGAAATATATATAAGAAGGTTGTTGTTATGACTAAAAAAAAAAAAAA                      ]
[-] EMBL CF323463             [                                                                                                                                   GCCAAATCGTGTCACGCCAAGGCGCGCCCTT GGCG CCAAGGAAACCCAGTGATCGAG CCGGCGCCATCT CCGCCGTACACGTGCCCGC CTACGAGCCTGGATCAACGGCTCTGGTCGCGTCTCCTCCTCCAGCTTGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTGCCTTGTGTTTATGTAATTCGTGTGAGGCGATCAGGGAAAAGAATTACCTGAAATCGTCTAAGTTACTAGTGTTATTTC GTGTGTGCTAAATAAGTTTTAGATGTGAGGTGAGGTCGATCTATCATGTAATGTACTGAACTTATATGTGGTGTTCTTCGTGGCACCGGGAAATATATATAAGAAGGTTGTTGTTATGACTAAAAAAAAAAAAAA                      ]
[+] EMBL C96637               [                                                                                                                                                  GCCAAGGCGCCCCCTTGGGCGCCCAAGGAAACCCCGTGATCGAGCCCGGCGCCATTTCCCGCCGTACACGTGCCCGCNCTACGAGCCTGGATCAACGGCTCTGGTCGCNTCTCCTCCTCCAGCTTGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTGCCTTGTGTTTATGTAATTCGTNTGAGGCGATCAGGGAAAAGAATTACCTGAAATCGTCTAAGTTACTNGTGTTATTTC GTGTGTGCTAAATAAGTTTTAGATGTGAGGTGAGGTCGATCTATCATGTNATGTACTGAACTTATATGTGGTGTTCTTCGTGGCACCGGGAAATATATATAAGAAGGTTGTTGTTATGNCTAAAAAAAAAAAAAA                      ]
[+] EMBL C97052               [                                                                                                                                                                      n CCAAGGAAACCCAGTGATCGAG CCGGCGCCATCT CCGCCGTACACGTGCCCGC CTACGAGCCTGGATCAACGGCTCTGGTCGCGTCTCCTCCTCCAGCTTGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTGCCTTGTGTTTATGTAATTCGTGTGAGGCGATCAGGGAAAAGAATTACCTGAAATCGTCTAAGTTACTAGTGTTATTTC GTGTGTGCTAAATAAGTTTTAGATGTGAGGTGAGGTCGATCTATCATGTAATGTACTGAACTTATATGTGGTGTTCTTCGTGGCACCGGGAAATATATATAAGAAGGTTGTTGTTAaaan                                     ]
[+] EMBL AU108537             [                                                                                                                                                                                                                    CACGTGCCCGC CTACGAGCCTGGATNAACGGCTCTGGTCGCGTCTCCTCCTCCAGCTTGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTGCCTTGTGTTTATGTAATTCGTGTGAGGCGATCAGGGAAAAGAATTACCTGAAATCGTCTAAGTTACTAGTGTTATTTC GTGTGTGCTAAATAAGTTTTAGATGTGAGGTGAGGTCGATCTNTCATGTAATGTACTGAACTTATATGTGGTGTTCTTCGTGGCNCCGGGAAATATATATAAGAAGGTTGTTGTTATGACTAAGGTTATGCCAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU067868             [                                                                                                                                                                                                                                  ACGAGCCTGGATCAACGGCTCTGGTCGCGTCTCCTCCTCCAGCTTGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTNCCTTGTGTTTATGTAATTCGTGTGAGGCGATCAGGGAAAAGAATTACCTGAAATCGTCTAAGTTACTNGTGTTATTTC GTGTGTGCTAAATAAGTTTTAGATGTGAGGTGAGGTCGATCTATCATGTAATGTACTGAACTTATATGTGGTGTTCTTCGTGGCACCGGGAAATATATATAAGAAGGTTGTTGTTATGACTAAAAAAAAAAAAA                       ]




>consensus_16625#2
CTGGATCGTCAAGAACTCGTGGGGCACAGCCTGGGGCGAGGGCGGCTACATCCGGATGCA
GCGCGACTCCGGCTACGACGGCGGCCTCTGCGGCATCGCCATGGAAGCCTCCTACCCCGT
CAAGTTCTCGCCAAATCGTGTCACGCCAAGGCGCGCCCTTGGCGCCAAGGAAACCCAGTG
ATCGAGCCGGCGCCATCTCCGCCGTACACGTGCCCGCCTACGAGCCTGGATCAACGGCTC
TGGTCGCGTCTCCTCCTCCAGCTTGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTA
ATTGCCTTGTGTTTATGTAATTCGTGTGAGGCGATCAGGGAAAAGAATTACCTGAAATCG
TCTAAGTTACTAGTGTTATTTCGTGTGTGCTAAATAAGTTTTAGATGTGAGGTGAGGTCG
ATCTATCATGTAATGTACTGAACTTATATGTGGTGTTCTTCGTGGCACCGGGAAATATAT
ATAAGAAGGTTGTTGTTATGACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_16625#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 327
fasta sequence

                              [GAGTAGAAATTTTCCTCCTCCATCTTGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTGCCTTGTGTTCATGTAATTCCTGTGACGCGATCAGGGAAACATAATCACCTGAAATCGTCTAAGTTACTAGTGTTATTTCGTGTGTGCTAAATAAGTTTTATTATGTGAGGTGAGGTCGATCTATCATGTAATGTACTGAACTTATATGTGGTGTTCTTCGTGGCACCGGGAAATATATATAAGAAGGTTGTTGTTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAATAACCAAAAAAAAAAAAA]

[+] EMBL CF321845             [GAGTAGAAATTTTCCTCCTCCATCTTGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTGCCTTGTGTTCATGTAATTCCTGTGACGCGATCAGGGAAACATAATCACCTGAAATCGTCTAAGTTACTAGTGTTATTTCGTGTGTGCTAAATAAGTTTTATTATGTGAGGTGAGGTCGATCTATCATGTAATGTACTGAACTTATATGTGGTGTTCTTCGTGGCACCGGGAAATATATATAAGAAGGTTGTTGTTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAATAACCAAAAAAAAAAAAA]
[+] EMBL AU092404             [                                                                                                                                                                                                  TAATGTACTGNANTTATATGTGGTGTTNTTCGTGGCNCCGGGNAATATATATAAGAAGGTTGTTGTTATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA                       ]




>consensus_16625#3
GAGTAGAAATTTTCCTCCTCCATCTTGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGT
TAATTGCCTTGTGTTCATGTAATTCCTGTGACGCGATCAGGGAAACATAATCACCTGAAA
TCGTCTAAGTTACTAGTGTTATTTCGTGTGTGCTAAATAAGTTTTATTATGTGAGGTGAG
GTCGATCTATCATGTAATGTACTGAACTTATATGTGGTGTTCTTCGTGGCACCGGGAAAT
ATATATAAGAAGGTTGTTGTTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAATAATAACCAAAAAAAAAAAAA

consensusID : consensus_16625#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 238
fasta sequence

                              [CTATNATTGTTGCTNCTCTTTGTTAATTNCCCTTGTGTTAATGTAATTCGTNTAAGGNGATCAGGNAAAAGAATTNCNTGAAATCGTCNAAGTTACTCCGTGTNATTNCGTGTGTGCTAAAAAAGTTTTAGATGTNAGGTGAGNTCGATCTATCATGTNATGTACTGAACTTATATGTGGTGTTCTTCGTGGCCACCGGGAAATATATATAAGAAGGTTNTTGTTATGACNAAAAAAA]

[+] EMBL AU092043             [CTATNATTGTTGCTNCTCTTTGTTAATTNCCCTTGTGTTAATGTAATTCGTNTAAGGNGATCAGGNAAAAGAATTNCNTGAAATCGTCNAAGTTACTCCGTGTNATTNCGTGTGTGCTAAAAAAGTTTTAGATGTNAGGTGAGNTCGATCTATCATGTNATGTACTGAACTTATATGTGGTGTTCTTCGTGGCCACCGGGAAATATATATAAGAAGGTTNTTGTTATGACNAAAAAAA]




>consensus_16625#4
CTATNATTGTTGCTNCTCTTTGTTAATTNCCCTTGTGTTAATGTAATTCGTNTAAGGNGA
TCAGGNAAAAGAATTNCNTGAAATCGTCNAAGTTACTCCGTGTNATTNCGTGTGTGCTAA
AAAAGTTTTAGATGTNAGGTGAGNTCGATCTATCATGTNATGTACTGAACTTATATGTGG
TGTTCTTCGTGGCCACCGGGAAATATATATAAGAAGGTTNTTGTTATGACNAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_16625#0      AGATCGCCCTCACCCTCCAATTCCAATCCCTCCCAAGAACTAGCTGATCACGACGAGCAG 60
consensus_16625#1      ------------------------------------------------------------
consensus_16625#2      ------------------------------------------------------------
consensus_16625#3      ------------------------------------------------------------
consensus_16625#4      ------------------------------------------------------------
                                                                                   

consensus_16625#0      CTAGTCCACTGCTACTGCGATCGATCGGTTGCAAAGTTAATTAATTAGTGGCGATCGATC 120
consensus_16625#1      ------------------------------------------------------------
consensus_16625#2      ------------------------------------------------------------
consensus_16625#3      ------------------------------------------------------------
consensus_16625#4      ------------------------------------------------------------
                                                                                   

consensus_16625#0      GATCATGGGGAGGGTTATTAGCAGCTGGAGGGTTCTTGCGGTGGTGGCTGCTTTGATGGC 180
consensus_16625#1      ------------------------------------------------------------
consensus_16625#2      ------------------------------------------------------------
consensus_16625#3      ------------------------------------------------------------
consensus_16625#4      ------------------------------------------------------------
                                                                                   

consensus_16625#0      CATGGCGGCGGTGGAGCTGTGCGCCGCGATACCGTTCGACGAGAGGGATTTGGAGTCCGA 240
consensus_16625#1      ------------------------------------------------------------
consensus_16625#2      ------------------------------------------------------------
consensus_16625#3      ------------------------------------------------------------
consensus_16625#4      ------------------------------------------------------------
                                                                                   

consensus_16625#0      CGAGGCGCTGTGGGATCTGTACGAGCGGTGGCAGGAGCACCACCACGTGCCGCGCCACCA 300
consensus_16625#1      ------------------------------------------------------------
consensus_16625#2      ------------------------------------------------------------
consensus_16625#3      ------------------------------------------------------------
consensus_16625#4      ------------------------------------------------------------
                                                                                   

consensus_16625#0      CGGCGAGAAGCACCGCCGGTTCGGGCGTTCAAGGACAACGTGAGGTACATCCACGAGCAC 360
consensus_16625#1      ------------------------------------------------------------
consensus_16625#2      ------------------------------------------------------------
consensus_16625#3      ------------------------------------------------------------
consensus_16625#4      ------------------------------------------------------------
                                                                                   

consensus_16625#0      AACAAGCGCGCGCCGGGGCTACCGCTCCGCTCAACCGCTTCGGCGACATGGGCAGAGAGG 420
consensus_16625#1      ------------------------------------------------------------
consensus_16625#2      ------------------------------------------------------------
consensus_16625#3      ------------------------------------------------------------
consensus_16625#4      ------------------------------------------------------------
                                                                                   

consensus_16625#0      AGTTCCGCGCCACGTTCGCCGGGTCCCACGCCAACNACCTCCGCCGCGACGGCCTCGCCG 480
consensus_16625#1      ------------------------------------------------------------
consensus_16625#2      ------------------------------------------------------------
consensus_16625#3      ------------------------------------------------------------
consensus_16625#4      ------------------------------------------------------------
                                                                                   

consensus_16625#0      CGCCGCCGCTCCCGGGGTTCATGTACGAGGGCGTCCGCGACCTCCCCCGCGCCGTCGACT 540
consensus_16625#1      ------------------------------------------------------------
consensus_16625#2      ------------------------------------------------------------
consensus_16625#3      ------------------------------------------------------------
consensus_16625#4      ------------------------------------------------------------
                                                                                   

consensus_16625#0      GGCGCCGCAAGGGCGCGGTCACCGGCGTCAAGGACCAGGGCAAGTGCGGCAGCTGCTGGG 600
consensus_16625#1      ------------------------------------------------------------
consensus_16625#2      ------------------------------------------------------------
consensus_16625#3      ------------------------------------------------------------
consensus_16625#4      ------------------------------------------------------------
                                                                                   

consensus_16625#0      CGTTCTCCACGGTGGTGTCCGTGGAGGGCATCAACGCGATCCGGACGGGGCGGCTGGTGT 660
consensus_16625#1      --------ACGGTGGTGTCCGTGGAGGGCATCAACGCGATCCGGACGGGGCGGCTGGTGT 52
consensus_16625#2      ------------------------------------------------------------
consensus_16625#3      ------------------------------------------------------------
consensus_16625#4      ------------------------------------------------------------
                                                                                   

consensus_16625#0      CGCTGTCGGAGCAGGAGCTGATCGACTGCGACACGGCGGACAACAGCGGCTGCCAGGGCG 720
consensus_16625#1      CGCTGTCGGAGCAGGAGCTGATCGACTGCGACACGGCGGACAACAGCGGCTGCCAGGGCG 112
consensus_16625#2      ------------------------------------------------------------
consensus_16625#3      ------------------------------------------------------------
consensus_16625#4      ------------------------------------------------------------
                                                                                   

consensus_16625#0      GGCTCATGGAGAACGCGTTCGAGTACATCAAGCACAGCGGCGGCATCACCACCGAGTCCG 780
consensus_16625#1      GGCTCATGGAGAACGCGTTCGAGTACATCAAGCACAGCGGCGGCATCACCACCGAGTCCG 172
consensus_16625#2      ------------------------------------------------------------
consensus_16625#3      ------------------------------------------------------------
consensus_16625#4      ------------------------------------------------------------
                                                                                   

consensus_16625#0      CCTACCCGTACCGCGCCGCCAACGGAACGTGCGACGCCGTCCGCGCGCGCGGCGGGC--- 837
consensus_16625#1      CCTACCCGTACCGCGCCGCCAACGGAACGTGCGACGCCGTCCGCGCGCGGCGCGCGCCGN 232
consensus_16625#2      ------------------------------------------------------------
consensus_16625#3      ------------------------------------------------------------
consensus_16625#4      ------------------------------------------------------------
                                                                                   

consensus_16625#0      TGGTGGTGATCGACGGGCACCAGAACGTGCCGGCCAACAGCGAGGCCGCGCTCGCCAAGG 897
consensus_16625#1      TGGTGGTGATCGACGGGCACCAGAACGTGCCGGCCAACAGCGAGGCCGCGCTCGCCAAGG 292
consensus_16625#2      ------------------------------------------------------------
consensus_16625#3      ------------------------------------------------------------
consensus_16625#4      ------------------------------------------------------------
                                                                                   

consensus_16625#0      CCGTCGCCAACCAGCCCGTCTCCGTCGCCATCGACGCCGGCGACCAGTCCTTCCAGTTCT 957
consensus_16625#1      CCGTCGCCAACCAGCCCGTCTCC-TCGCCATCGACGCCGGCGACCAGTCCTTCCAGTTCT 351
consensus_16625#2      ------------------------------------------------------------
consensus_16625#3      ------------------------------------------------------------
consensus_16625#4      ------------------------------------------------------------
                                                                                   

consensus_16625#0      ACTCCGACGGCGTCTTCGCCGGCGACTGCGGC-ACCGACCTCGACCACGGCGTCGCGGTG 1016
consensus_16625#1      ACTCCGACGGCGTCTTCGCCGGCGACTGCGGCCACCGACCTCGACCACGGCGTCGCGGTG 411
consensus_16625#2      ------------------------------------------------------------
consensus_16625#3      ------------------------------------------------------------
consensus_16625#4      ------------------------------------------------------------
                                                                                   

consensus_16625#0      GTCGGCTACGGCGAGACCAACGACGGCACGGAGTACTGGATCGTCAAGAACTCGTGGGGC 1076
consensus_16625#1      GTCGGCTACGGCGAGACCAACGACGGCACGGAGTACTGGATCGTCAAGAACTCGTGGGGC 471
consensus_16625#2      -----------------------------------CTGGATCGTCAAGAACTCGTGGGGC 25
consensus_16625#3      ------------------------------------------------------------
consensus_16625#4      ------------------------------------------------------------
                                                                                   

consensus_16625#0      ACAGCCTGGGGCGAGGGCGGCTACATCCGGATGCAGCGCGACTCCGGCTACGACGGCGGC 1136
consensus_16625#1      ACAGCCTGGGGCGAGGGCGGCTACATCCGGATGCAGCGCGACTCCGGCTACGACGGCGGC 531
consensus_16625#2      ACAGCCTGGGGCGAGGGCGGCTACATCCGGATGCAGCGCGACTCCGGCTACGACGGCGGC 85
consensus_16625#3      ------------------------------------------------------------
consensus_16625#4      ------------------------------------------------------------
                                                                                   

consensus_16625#0      CTCTGCGGCATCGCCATGGAAGCCTCCTACCCCGTCAAGTTCTCGCCAAATCGTGTCACG 1196
consensus_16625#1      CTCTGCGGCATCGCCATGGAAGCCTCCTACCCCGTCAAGTTCTCGCCAAATCGTGTCACG 591
consensus_16625#2      CTCTGCGGCATCGCCATGGAAGCCTCCTACCCCGTCAAGTTCTCGCCAAATCGTGTCACG 145
consensus_16625#3      ------------------------------------------------------------
consensus_16625#4      ------------------------------------------------------------
                                                                                   

consensus_16625#0      CCAAGGCGCGCCCTTGGGCCAAAGGAAACCCAGTGATCGAGCCGGCGCCATCTCCGCCGT 1256
consensus_16625#1      CCAAGGCGCGCCCTTGGCGCCAAGGAAACCCAGTGATCGAGCCGGCGCCATCTCCGCCGT 651
consensus_16625#2      CCAAGGCGCGCCCTTGGCGCCAAGGAAACCCAGTGATCGAGCCGGCGCCATCTCCGCCGT 205
consensus_16625#3      ------------------------------------------------------------
consensus_16625#4      ------------------------------------------------------------
                                                                                   

consensus_16625#0      ACACATGCCCGCCTACGAGCCTGGATCAACGGCTCTGGTCGCG--TCTCCTCCTCCAGCT 1314
consensus_16625#1      ACACGTGCCCGCCTACGAGCCTGGATCAACGGCTCTGGTCGCG--TCTCCTCCTCCAGCT 709
consensus_16625#2      ACACGTGCCCGCCTACGAGCCTGGATCAACGGCTCTGGTCGCG--TCTCCTCCTCCAGCT 263
consensus_16625#3      -----------------------------------GAGTAGAAATTTTCCTCCTCCATCT 25
consensus_16625#4      ------------------------------------------------------------
                                                                                   

consensus_16625#0      TGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTGCC-TTGTGTTTATGTAATT 1373
consensus_16625#1      TGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTGCC-TTGTGTTTATGTAATT 768
consensus_16625#2      TGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTGCC-TTGTGTTTATGTAATT 322
consensus_16625#3      TGCAAAATGGTGCTATTATTGTTGCTGCTCTTTGTTAATTGCC-TTGTGTTCATGTAATT 84
consensus_16625#4      ------------CTATNATTGTTGCTNCTCTTTGTTAATTNCCCTTGTGTTAATGTAATT 48
                                   **** ********* ************* ** ******* ********

consensus_16625#0      CGTGTGAGGCGATCAGGGAAA-AGAATTACCTGAAATCGTCTAAGTTACTA-GTGTTATT 1431
consensus_16625#1      CGTGTGAGGCGATCAGGGAAA-AGAATTACCTGAAATCGTCTAAGTTACTA-GTGTTATT 826
consensus_16625#2      CGTGTGAGGCGATCAGGGAAA-AGAATTACCTGAAATCGTCTAAGTTACTA-GTGTTATT 380
consensus_16625#3      CCTGTGACGCGATCAGGGAAACATAATCACCTGAAATCGTCTAAGTTACTA-GTGTTATT 143
consensus_16625#4      CGTNTAAGGNGATCAGGNAAA-AGAATTNCNTGAAATCGTCNAAGTTACTCCGTGTNATT 107
                       * * * * * ******* *** * ***  * ********** ********  **** ***

consensus_16625#0      TCGTGTGTGCTAAATAAGTTTTAG-ATGTGAGGTGAGGTCGATCGATC------------ 1478
consensus_16625#1      TCGTGTGTGCTAAATAAGTTTTAG-ATGTGAGGTGAGGTCGATCTATCATGTAATGTACT 885
consensus_16625#2      TCGTGTGTGCTAAATAAGTTTTAG-ATGTGAGGTGAGGTCGATCTATCATGTAATGTACT 439
consensus_16625#3      TCGTGTGTGCTAAATAAGTTTTATTATGTGAGGTGAGGTCGATCTATCATGTAATGTACT 203
consensus_16625#4      NCGTGTGTGCTAAAAAAGTTTTAG-ATGTNAGGTGAGNTCGATCTATCATGTNATGTACT 166
                        ************* ********  **** ******* ****** ***            

consensus_16625#0      ----TATCATGTGGTGTTCTTCGTGGC-ACCGGAAA---TATATAAGAAGGTTGT----- 1525
consensus_16625#1      GAACTTATATGTGGTGTTCTTCGTGGC-ACCGGGAAATATATATAAGAAGGTTGTTGTTA 944
consensus_16625#2      GAACTTATATGTGGTGTTCTTCGTGGC-ACCGGGAAATATATATAAGAAGGTTGTTGTTA 498
consensus_16625#3      GAACTTATATGTGGTGTTCTTCGTGGC-ACCGGGAAATATATATAAGAAGGTTGTTGTTA 262
consensus_16625#4      GAACTTATATGTGGTGTTCTTCGTGGCCACCGGGAAATATATATAAGAAGGTTNTTGTTA 226
                           *   ******************* ***** **   ************** *     

consensus_16625#0      ------------------------------------------------------------
consensus_16625#1      TGACTAAGGTTATGCCAAATTTCATCCAAAAAAGACTAAGGTTATGCCAAATTTCATCCA 1004
consensus_16625#2      TGACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------------------- 539
consensus_16625#3      TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAATAACCAAAAAAAA 322
consensus_16625#4      TGACNAAAAAAA------------------------------------------------ 238
                                                                                   

consensus_16625#0      -----
consensus_16625#1      AAA-- 1007
consensus_16625#2      -----
consensus_16625#3      AAAAA 327
consensus_16625#4      -----