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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16660#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 1387 fasta sequence
[GAGTAGAAAACTTTTCTTCACCCACTCCACGCCATCTCTCTCGCGCTCTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGAC-ACCTCT-GACCCAAAGAAAACAC-TACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTT-CGAAGCAAATCT-GC-TGGAAGAGGGCTC-TTTCGATGCTG-CGG-TCAATGGTT-GTGATTGTGTTTTCCAT-ACGGCTTC-TCCC-TTTTACC-ACAATGTTAAAGATCCTAAGGCTGAGTTACTTGACCCTGCAGTCAAAGGAACCCTTAATGTTCTAGGCTCCTGCAAGAAAGCTTCCATTAGAAGAGTTATCGTGACATCATCCATGGCTGCTGTTGCCTACAATGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAGTTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGGAGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAACCCAGCAATGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGGATCATCCTCGACATATCCTAATTTCAGCTTT-GGCT-GGATAAACGTTAA-GGATGTTGCCCTGGCACATATCCTTGCATATGAAGTTCCTTCAGCAAAT-GGAA-GATATTGCATGGTTGAAAGAGTTGCGCACTACTCAGAGCTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTTGAAANAGAAAGGATTTGTTACTTTTGATTCAAGCAACCTGTAAAACAACAG-AGCTCCATACACATGAACTTGCTTGTCATAGCTAGTACTCTAGC-GGTAACTTTGCATGAACTACTACAGATGTGGTCTGTATTCTGTACTACGATCTGAAATAAAGTGGAGGCAAATTGCAGTGTTGATTATTCTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF330329 [GAGTAGAAAACTTTTCTTCACCCACTCCACGCCATCTCTCTCGCGCTCTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGATTATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGTTGTGTGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGAC ACCTCT GACCCAAAGAAAACAC TACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTT CGAAGCAAATCT GC TGGAAGAGGGCTC TTTCGATGCTG CGG TCAAAGGTT GTGATTGTGTTTTCCAT ACGGCTTC TCCC TTTTACC ACAATGTTAAAGATCCTAAGGCTGAGTTACTCGACCCTGCAGTCAAAGGAACCCTTAATGTTCTAGGCTCCTGCAAGAAAGCTTCCATTAGAAGAGTTATCGTGACATCATCCATGGCTGCTGTTGCCTACAATGGGAAACCAAGAACTCCTGATGTA ]
[+] EMBL AK068824 [ TCTTCACCCACTCCACGCCATCTCTCTCGCGCTCTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGAC ACCTCT GACCCAAAGAAAACAC TACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTT CGAAGCAAATCT GC TGGAAGAGGGCTC TTTCGATGCTG CGG TCAATGGTT GTGATTGTGTTTTCCAT ACGGCTTC TCCC TTTTACC ACAATGTTAAAGATCCTAAGGCTGAGTTACTTGACCCTGCAGTCAAAGGAACCCTTAATGTTCTAGGCTCCTGCAAGAAAGCTTCCATTAGAAGAGTTATCGTGACATCATCCATGGCTGCTGTTGCCTACAATGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAGTTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGGAGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAACCCAGCAATGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGGATCATCCTCGACATATCCTAATTTCAGCTTT GGCT GGATAAACGTTAA GGATGTTGCCCTGGCACATATCCTTGCATATGAAGTTCCTTCAGCAAAT GGAA GATATTGCATGGTTGAAAGAGTTGCGCACTACTCAGAGCTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTTGAAAGAGAAAGGATTTGTTACTTTTGATTCAAGCAACCTGTAAAACAACAG AGCTCCATACACATGAACTTGCTTGTCATAGCTAGTACTCTAGC GGTAACTTTGCATGAACTACTACAGATGTGGTCTGTATTCTGTACTACGATCTGAAATAAAGTGGAGGCAAATTGCAGTGTTGATTATTCTGCCAtgttt ]
[+] EMBL OSS1972A [ CCACTCCACGCCATCTCTCTCGCGCTCTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGTTACACGGTNCGCGCCACCATCCGGGACAACTTNT NANCCAAAGAAAACAC TACAACTTCGTTCCCTNGATTGAGCCAACGAAAGANTTCATTTNTT CGAAGCAAATCT TCTTGGAAG ]
[+] EMBL AU067974 [ ACGCCATCTCTCTCGCGCTCTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGAC ACCTCT GACCCAAAGAAAACAC TACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTT CGAAGCAAATCT GC TGGAAGAGGGCTC TTTCG ]
[+] EMBL AU181856 [ TCTCTCGCGCTCTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGAC ACCTCT GACCCAAAGAAAACAC TACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTT CGAAGCAAATCT GC TGGAAGAGGGCTC TTTCGATGCTG CGG TCAATGGTT GTGATTGTGTTTTCCAT ACGGCTTC TCCC TTTTACC ACAATGTTAAAGATCCTAAGG ]
[+] EMBL CB645627 [ TCTCGCCCTTTAAGGGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGAC ACCTCT GACCCAAAGAAAACAC TACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTT CGAAGCAAATCT GC TGGAAGAGGGCTC TTTCGATGCTG CGG TCAATGGTT GTGATTGTGTTTTCCAT ACGGCTTC TCCC TTTTACC ACAATGTTAAAGATCCTAAGGCTGAGTTACTTGACCCTGCAGTCAAAGGAACCCTTAATGTTCTAGGCTCCTGCAAGAAAGCTTCCATTAGAAGAGTTATCGTGACATCATCCATGGCTGCTGTTGCCTACAATGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAGTTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGGAGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAACCCAGCAATGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTG ]
[+] EMBL AU069566 [ tntnTCGCNCTCTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCANACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTNAGGCGGCG CCGGAACCGGNAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTAAGGCTGCTCCTCGCCCGNGGCTACACGGTCCGCGCCACCATCCGGNAC ACCTCT AACCCAAAGAAAACAC TACACCTGCGTGCCCTGGATGGAGCCAACGAAAGANTCCATTTGTT CGAAGCAAATCT GC TTGAAGAGGG TC TTTCGATGCTN CGG TCAATGGTT TAATTGT TTTTCCAT ACGGCTTC T CC TTTTACC ACAATGTTAAAGATCCTAAGGttag ]
[+] EMBL CF280693 [ CGCGCTCTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGAC ACCTCT GACCCAAAGAAAACAC TACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTT CGAAGCAAATCT GC TGGAAGAGGGCTC TTTCGATGCTG CGG TCAATGGTTGGTGATTGTGTTTTCCAT ACGGCTTC TCCC TTTTACC ACAATGTTAAAGATCCTAAGGCTGAGTTACTTGACCCTGCAGTCAAAGGAACCCTTAATGTTCTAGGCTCCTGCAAGANAGCTTCCATTAGAAGAGTTATCGTGACATCATCCATGGCTGCTGTTGCCTACAATGGGAAACC ]
[+] EMBL OSC103831 [ GCGCTCTCTACGGAGCCAAGGCGAGGAGGCGGCGGCGNCGGNGNCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTNAGGCGGCGNCCGGNACCNGGAAGCTGGTGTNCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGACCGCGGNTACACGGTTCGAGATACCATCCAGGAC AACTCT NACCCAAAGAAAACAC TACACCTGCGT TCCTAGATGGA ]
[+] EMBL AU069349 [ TCTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGAC A CTCT GACCCAAAGAAAACAC TACA CTGCGTG CCTGGATGGAGCCAACGAAAGACTCCATTTGTT CGAAGCAAATCT GC TGGAA AAGGCTCTTTTCGATGCT ]
[+] EMBL AU163616 [ CTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGAC ACCTCTGGACCCAAAGAAAACACTTACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTTCCGAAGCAAATCTNGC TGGAAGAGGGCTC TTTCGATGCTGCCGGTTCAATGGTT GTGATTGTGTTTTCCATAACGGCTTCTTCCCTTTTTACCAACAATGTTta ]
[+] EMBL AU162706 [ CTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGAC ACCTCT GACCCAAAGAAAACAC TACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTT CGAAGCAAATCT GC TGGAAGAGGGCTC TTTCGATGCTG CGG TCAATGGTT GTGATTGTGTTTTCCAT ACGGCTTC TCCC TTTTACC ACAATGTTAAAGATCCTAAGGCTGAGTTACTTGACCCTGCAGTCAAAGGAACCCTTAATGTTCTAGGCTCCTGCAAGAAAGCTTCCATTAGAAGAGTTATCGTGANATCATCCATGGCTGCTGTTGCCTACAATGGGAAACCAAGAACTCCTGATGTA TTGTTGATGAGACATGGTTTTCAGTTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAACAGAGGAGGCTGCTTGGAAGTTTTCAAAAGATAAT ]
[+] EMBL AU093494 [ GGA CCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGAC ACCTCT GACCCAAAGAAAACAC TACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTT CGAAGCAAATCT GC TGGAAGAGGGCTC TTTCGATGCTG ]
[+] EMBL OS1020A [ AATGTTCTAGGCTCCTGCAAGAAAGCTTCCATTAGAAGAGTTATCGTGACATCATCCATGGCTGCTGTTGCCTACAATGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAGTTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGGAGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAACCCAGCAATGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTNAAGCTAATCAATGGATCATCCTCGACATATCCTAATTNCAGCTTT GGCT GGATAAACGTTAA GGATGTTGCCCTGGNACATATCCTTGCATATGGAGTTCCTTCAGCAAATGGGAG GATATTGCATGGTTGGAAGAGTTGCGGACTACTCAGAGCTCGTCC AATCATTCGTG GGTGTATCCC ATATTCCTNTGCCAG CAAGTGTGC GGTGCCAGGCnttnggc ]
[+] EMBL C28940 [ AGAAAGCTTCCATTAGAAGAGTTATCGTGACATCATCCATGGCTGCTGTTGCCTACAATGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAGTTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGGAGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAACCCAGCAATGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGGATCATCCTCGACATATCCTAATTTCAGCTTTGGGCTGGGATAAACGGTAAGGGATGTTTCCCTGGGACATATCCTTGCATATGAAGTTCCCTCAGCAAATGGGAAGGTTTTTCCATGGgttta ]
[+] EMBL OSC2051A [ CATGGCTGCTGTTGCCTACAATGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAGTTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGGAGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAACCCAGCAATGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGGATCATCCTCGACATATCCTAATTTCAGCTTT GGCT GGATAAACGTTAAGGGATGTTGCCCTGGNACATATCCTTGCATATGA ]
[-] EMBL CF326219 [ ATCCTCGACATATCCTAATTTCAGCTTT GGCT GGATAAACGTTAA GGATGTTGCCCTGGCACATATCCTTGCATATGAAGTTCCTTCAGCAAAT GGAA GATATTGCATGGTTGAAAAAGTTGCGCCCTACTCAAAGCTCGTCCAAATCATTTGTGAGATGTATCCCAATATTCCTTTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTGCCAATTTTCCAGGTATCAAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCCCCCGAGCATCAAGGAGACCCTCGAGAGCTTGAAAAAAAAAGGATTTGTTACTTTTGATTCAAGCAACCTGTAAAACAACAG AGCTCCATACCCATGAACTTGCTTGTCATAGCTAGAAATATTAC GGTAACTTTGCATGAACTACTACAAATGTGGTCTGTATTCTGTACTACGATTTGAAATAAAGTGGAGGCAAATTGCAGTGTTGATTA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA ]
[+] EMBL AU181468 [ CTTGCATATGAAGTTCCTTCAGCAAAT GGAA GATATTGCATGGTTGAAAGAGTTGCGCACTACTCAGAGCTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTTGAAANAGAAAGGATTTGTTACTTTTGATTCAAGCAACCTGTAAAACAACAG AGCTCCATACACATGAACTTGCTTGTCATAGCTAGTACTCTAGC GGTAACTTTGCATGAACTACTACAGATGTGGTCTGTATTCTGTACTACGATCTGAAATAAAGTGGAGGCAAATTGCAGTGTTGATTATTCTGCCNAAAAAAAAAAAAAAAA ]
[+] EMBL AU182030 [ CCTTCAGCAAAT GGAA GATATTGCATGGTTGAAAGAGTTGCGCNCTACTCAGAGCTNGTCCAAATCATTNGTGAGATGTATCCCAATATTCCTNTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTGCCAAT TTCCAGGTATCAAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTTGAAANANAAAGGATTTGTTACTTTTGATTCAAGCAACCTGTAAAACAACAG AGCTCCATACACATGAACTTGCTTGTCATAGCTAGTACTCTAGCGGGTAACTTTGCATGAACTACTACAGATGTGGTCTGTATTNTGTACTACGATNTGAAATAAAGTGGAGGCAAATTGCAGTGTTGATTATTNTGCCCAAAAAAAAAAAAAAAAAAAA ]
[+] EMBL AU181857 [ AGATGACAAGCCATCAGTGCCAATTTACCAGGTATCAAAGGAAAANATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCNCACGAGCATCAAGGAGACCATCGAGAGCTTGAAANAGAAAGGATTTGTTACTTTTGATTCAAGCAACCTGTAAAACAACAG AGCTCCATACNCATGAACTTGCTTGTCATAGCTAGTACTCTAGC GGTAACTTTGCATGAACTACTACAGATGTGGTCTGTATTCTGTACTACGATNTGAAATAAAGTGGAGGCAAATTGCAGTGTTGATTATTCTGCCNAAAAAAAAAAAAAAAAAAAA ]
[+] EMBL CF328266 [ CAACAGAAGCTCCATACACATGAACTTGCTTGTCATAGCTAGTACTCTAGC GGTAACTTTGCATGAACTACTACAGATGTGGTCTGTATTCTGTACTACGATCTGAAATAAAGTGGAGGCAAATTGCAGTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_16660#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1359 fasta sequence
[TATTACTACTCCTCTTCACCCACTCCACGCCATCTCTCTCGCGCTCTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGACACCTCTGACCCAAAGAAAACACTACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTTCGAAGCAAATCTGCTGGAAGAGGGCTCTTTCGATGCTGCGGTCAATGGTTGTGATTGTGTTTTCCATACGGCTTCTCCCTTTTACCACAATGTTAAAGATCCCAAGGCTGAGTTACTTGACCCTGCAGTCAAAGGAACCCTTAATGTTCTAGGCTCCTGCAAGAAAGCTTCCATTAGAAGAGTTATCGTGACATCATCCATGGCTGCTGTTGCCTACAATGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAGTTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGGAGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAA-CCCAGCAATGGTCATTGGTCCCCTGCTGC-AGCCTTCAC-TGAATACTAGTGCTGAAGCAATTCTGAAGCTAAT-CAATGGATCATCCTC-GACATATCCTAAT-TTCAGCTTTGGCTGGATAAACGT-TAAGGATGTTG-CCCTGGCACATAT-CCTTGCATATG-AAGTTCCT-TCAGCA-AA--TGGAAGATATTGCATGGTTGA-AAGAGTTGCG-CA-CTA-CTCAGAGCTCGTCCAAAT-CA-TTCGTGAG-ATGTATCCC-AATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTG-CCAATCTACCAGGTATC-AAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTT-GAAAGAGAAAGGATTTGTTACTTTTGAT-TCAAGCAACCTGTAAAACAACAGAGCT-CCATACACATGAACTTGCTTGT-CA----TAGCTAGTACTCTAGCGGTAACTTTGC-ATGAACTACTAC-AGATGTGGTCTGTATTCTGTACTACGATCTGAAA--TAAAGTGGAGGCAAATTGCA--GTGTTGATTAAAAAAAAAAAAAAAAAAAAAATATCATGCCGTTACGTAGCGTATC]
[+] EMBL AK059305 [TATTACTACTCCTCTTCACCCACTCCACGCCATCTCTCTCGCGCTCTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGACACCTCTGACCCAAAGAAAACACTACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTTCGAAGCAAATCTGCTGGAAGAGGGCTCTTTCGATGCTGCGGTCAATGGTTGTGATTGTGTTTTCCATACGGCTTCTCCCTTTTACCACAATGTTAAAGATCCCAAGGCTGAGTTACTTGACCCTGCAGTCAAAGGAACCCTTAATGTTCTAGGCTCCTGCAAGAAAGCTTCCATTAGAAGAGTTATCGTGACATCATCCATGGCTGCTGTTGCCTACAATGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAGTTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGGAGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAA CCCAGCAATGGTCATTGGTCCCCTGCTGC AGCCTTCAC TGAATACTAGTGCTGAAGCAATTCTGAAGCTAAT CAATGGATCATCCTC GACATATCCTAAT TTCAGCTTTGGCTGGATAAACGT TAAGGATGTTG CCCTGGCACATAT CCTTGCATATG AAGTTCCT TCAGCA AA TGGAAGATATTGCATGGTTGA AAGAGTTGCG CA CTA CTCAGAGCTCGTCCAAAT CA TTCGTGAG ATGTATCCC AATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTG CCAATCTACCAGGTATC AAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTT GAAAGAGAAAGGATTTGTTACTTTTGAT TCAAGCAACCTGTAAAACAACAGAGCT CCATACACATGAACTTGCTTGT CA TAGCTAGTACTCTAGCGGTAACTTTGC ATGAACTACTAC AGATGTGGTCTGTATTCTGTACTACGATCTGAAA TAAAGTGGAGGCAAATTGC ]
[-] EMBL CB645628 [ tGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGTCCCTAGCAGAGGAGGATGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGCTACGGTGAC CCCAGCAATGGTCATTGGTCCCCTGATGC ATCCTTCAA TGAATACTAGTGCTGAAGCAATTCTGAAGCTAAT CAATGGATCATCCTC GACATATCGTAAT TTCACCTTTGGCTGGATAACCGT TAAGGATGTTG CCCTGGCACATAT CCTTGCATATG AAGTTCCT TCAGCA AA TGGAAGATATTGCACGTTTGA AAGAGTTGCG CA CTA CTCAGAGCTCGTCCAAAT CA TTCGCGAG ACGTATCCC AATATTCCTGTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTG CCAATCTACCAGGTATC AAAGGAAAAGATACAAAGCTTGGCCCTGGAAGAGATTCCCCTGCACACGAGCATCAAGGAGCCCATTGAGAGCTT GAAAGAGAACGGATTTGTTACTTTTGAT TCAAGCACCCTCTAAATCAACAGAGCT CCATACACATGAACTTG ]
[-] EMBL CF280694 [ CAATGGTATGTTCTGTCCAAGACCCTAGCAGAGGAGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAA CCCAGCAATGGTCATTGGTCCCCTGCTGC AGCCTTCAC TGAATACTAGTGCTGAAGCAATTCTGAAGCTAAT CAATGGATCATCCTC GACATATCCTAAT TTCAGCTTTGGCTGGATAAACGT TAAGGATGTTG CCCTGGCACATAT CCTTGCATATG AAGTTCCT TCAGCA AA TGGAAGATATTGCATGGTTGA AAGAGTTGCG CA CTA CTCAGAGCTCGTCCAAAT CA TTCGTGAG ATGTATCCC AATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTG CCAATCTACCAGGTATC AAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTT GAAAGAGAAAGGATTTGTTACTCTTGAT TCAAGCAACCTGTAAAACAACAGAGCT CCATACACATGAACTTGCTTGT CA TAGCTAGTACTCTAGCGGTAACTTTGC ATGAACTACTAC AGATGTGGTCTGTATTCTGTACTACGATCTGAAA TAAAGTGGAGGCAAATTGCA GTGGTGATTTAAAAAAAAAAAAAAAAAAAAATATCATGCCGTTACGTAGCGTATC]
[-] EMBL CF330328 [ GAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAA CCCAGCAATGGTCATTGGTCCCCTGCTGC AGCCTTCAC TGAATACTAGTGCTGAAGCAATTCTGAAGTTAAT CAATGGATCATCCTC GACATATCCTAAT TTCAGCTTTGGCTGGATAAACGT TAAGGATGTTG CCCTGGCACATAT CCTTGCATATG AAGTTCCT TCAGCA AA TGGAAGATATTGCATGGTTGA AAGAGTTGCG CA CTA CTCAGAGCTCGTCCAAAT CA TTCGTGAG ATGTATCCC AATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTG CCAATTTACCAGGTATC AAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTT GAAAGAGAAAGGATTTGTTACTTTTGAT TCAAGCAACCTGTAAAACAACAGAGCT CCATACACATGAACTTGCTTGT CA TAGCTAGTACTCTAGCGGTAACTTTGC ATGTACTACTAC AGATGTGGTCTGTATTCTGTACTACGATCTGAAA TAAAGTGGAGGCAAATTGCA GTGTTGATTAAAAAAAA ]
[+] EMBL AU067975 [ AAAGATAATGGATTTGNAATAGTTACGGTGAACCCCAGCAATGNTCATTGGTCCCCTGCTGC AGCCTTCAC TGAATNCTAGTGCTGAAGCAATTCTGAAGCTAATCCAATGGATCATCCTC GACATATCCTAAT TTCAGCTTTGGCTGGATAANCGT TAAGGATGTTG CCCTGGCACATAT CCTTGCATATG AAGTTCCT TCAGCA AA TGGAAGATATTGCATGGTTGA AAGAGTTGCG CA CTA CTCAGAGCTCGTCCAAAT CA TTCGTGAG ATGTATCCC AATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTG CCAATCTACCAGGTATC AAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTT GAAAGAGAAAGGATTTGTTACTTTTGAT TCAAGCAACCTGTAAAACAACAGAGCT CCATACACATGAACTTGCTTGT CA TAGCTAGTACTCTAGCGGTAACTTTGC ATGAACTACTAC AGATGTGGTCTGTATTCTGTACTACGATCTGAAA TAAAGTGGAGGCAAATTGCA GTGTTGATTAAAAAAAAA ]
[+] EMBL AU165252 [ TCATTGGTCCCCTGCTGCAAGCCTTCACTTGAATACTAGTGNTGAAGCAATTCTGAAGCTAAT CAATGGATCATCCTCGGACATATCCTAAT TTCAGCTTTGGCTGGATAAACGT TAAGGATGTTG CCCTGGCACATAT CCTTGCATATG AAGTTCCT TCAGCA AA TGGAAGATATTGCATGGTTGA AAGAGTTGCG CA CTA CTCAGAGCTCGTCCAAAT CA TTCGTGAG ATGTATCCC AATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTG CCAATCTACCAGGTATC AAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTT GAAAGAGAAAGGATTTGTTACTTTTGAT TCAAGCAACCTGTAAAACAACAGAGCT CCATACACATGAACTTGCTTGT CA TAGCTAGTACTCTAGCGGTAACTTTGC ATGAACTACTAC AGATGTGGTCTGTATTCTGTACTACGATCTGAAA TAAAGTGGAGGCAAATTGCA GTGTTGATTAAAAAAAAA ]
[+] EMBL AU056682 [ CTAAAGCTAAT CAATGGATCATCCTC GACATANCCTAAT TTCAGCTTTGGCTGGATAAACGT TAAGGATGTTG CCCTGGCACATAN CCTTGCATATG AAGTTCCT TCAGCA AA TGGAAGATATTGCATGGTTGA AAGAGTTGCG CA CTA CTCAGAGCTCGTCCAAAT CA TTCGTGAG ATGTATCCC AATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTG CCAATCTACCAGGTATC AAAGGNAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTT GAAAGAGAAAGGATTTGTTACTTTTGAT TCAAGCAACCTGTAAAACAACAGAGCT CCATACACATGAACTTGCTTGT CA TAGCTAGTACTCTAGCGGTAACTTTGC ATGAACTACTAC AGATGTGGTCTGTATTCTGTACTACGATCTGAAA TAAAGTGGAGGCAAATTGCA GTGTTGATTAAAAAA ]
[+] EMBL BQ909262 [ CCTC GACATATCCTAATNTTCAGCTTTGGCTGGATAAACGTNTAAGGATGTTG CCCTGGCACATATCCCTTGCATATG AAGTTCCTNTCAGCACAACGTGGAAGATATTGCATGGTTGATAAGAGTTGTG CACCTACCTCAGAGCTCGTCCAAAT CAGTTCGTGAG ATGTATCCC AACATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTGTCCAATCTACCAGGTATC AAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTTCGAAAGAGNAAGGATTTGTTACTTTTGATGTCAAGCAACCTGTAAAACNACAGAGCTGCCATACACATGAACTTGCTTGTGCATAGCTAGCTAGTACTCTAGCGGTAACTTTGC ATGAACTACTAC AGCTGTGGTCTGTACTCTGTACTACGATCTGAAACNCCNAGTGGAGGCCAATTGCAGTGTGTTGATTAAAAAAAAAA ]
[+] EMBL C98735 [ GGATGTTGCCCCTGGCACATAT CCTTGCATATGAAAGTTCCT TCAGCA AA TGGAAGATATTNCATGGTTGA AAGAGTTGCGCCA CTA CTCAGAGCTCGTCCAAATCCA TTCGTGAG ATGTATCCC AATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTG CCAATCTACCNGGTATC AAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTT GAAAGAGAAAGGATTTGTTACTTTTGAT TCAAGCAACCTGTAAAACAACAGAGCT CCATACACATGAACTTGCTTGT CA TAGCTAGTACTCTAGCGGTAACTTTGC ATGAACTACTAC AGATGTGGTCTGTATTCTGTACTACGATCTGAAA TAAAGTGGAGGCAAATTGCN GTGTTGATTAAAAA ]
[+] EMBL AU093493 [ TG CCCTGGCNCATAT CCTTGCATATG AAGTTCCT TCAGCA AA TGGAAGATATTGCATGGTTGA AAGAGTTGCG CA CTA CTCAGNGCTCGTCCAAAT CA TTCGTGNG ATGTATCCC AATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTG CCAATCTACCAGGTATC AAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGNGCATCAAGGAGACCATCGAGAGCTT GAAAGAGAAAGGATTTGTTACTTTTGAT TCAAGCAACCTGTAAAACAACAGAGCT CCATACACATGAACTTGCTTGT CA TAGCTAGTACTCTAGCGGTAACTTTGC ATGAACTACTAC AGATGTGGTCTGTATTCTGTACTACGATCTGAAA TAAAGTGGAGGCAAATTGCA GTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAaaaaaaaa ]
[+] EMBL AU197714 [ CATAT CCTTGCATATG AAGTTCCT TCAGCA AA TGGAAGATATTGCATGGTTGA AAGAGTTGCG CA CTA CTCAGAGCTCGTCCAAAT CA TTCGTGAG ATGTATCCC AATATTCCTCTGCCAGACAAGTGTGCAGATGNCAAGCCATCAGTG CCNATCTTCCAGGTATC AAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTT GAAAGAGAAAGGATTTGTTACTTTTGAT TCAAGCAACCTGTAAAACAACAGAGCT CCATACACATGAACTTGCTTGT CA TAGCTAGTACTCTAGCGGTAACTTTGCAATGAACTACTACAANATGTGGTCTGTATTNTGTANTACGATCTGAAA TAAAGTGGAGGCAAATTGCA GTGTTGATTAAAAAA ]
[+] EMBL AU166661 [ CA TTNGTGAGAATGTATCCCAAATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTG CCAATCTACCAGGTATCAAAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTT GAAAGAGAAAGGATTTGTTACTTTTGAT TCAAGCAACCTGTAAAACAACAGAGCT CCATACACATGAACTTGCTTGT CA TAGCTAGTACTCTAGCGGTAACTTTGC ATGAACTACTAC AGATGTGGTCTGTATTCTGTACTACGATCTGAAA TAAAGTGGAGGCAAATTGCA GTGTTGATTAAAAAAAAAA ]
consensusID : consensus_16660#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 809 fasta sequence
[CCGGAGCCAAGGCGAGGAGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCGCCCCAACCCCGTCCTTCGGTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCGTCCGGGACACCTCTGACCCAAAGAAAACACTACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTATTCGAAGCAAATCTGCTGGAAGAGGGCTCTTTCGATGCTGCGGTCAATGGTTGTGATTGTGTTTTCCATACGGCTTCTCCCTTTTACCACAATGTTAAAGATCCTAAGGCTGAGTTACTTGACCCTGCAGTCAAAGGAACCCTTAATGTTCTAGGCTCCTGCAAGAAAGCTTCCATTCGAAGAGTTATCGTGACATCATCCATGGCTGCTGTTGCCTACAACGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAGTTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGGAGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAACCCAGCAATGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG]
[+] EMBL CB621471 [CCGGAGCCAAGGCGAGGAGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCGCCCCAACCCCGTCCTTCGGTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCGTCCGGGACACCTCTGACCCAAAGAAAACACTACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTATTCGAAGCAAATCTGCTGGAAGAGGGCTCTTTCGATGCTGCGGTCAATGGTTGTGATTGTGTTTTCCATACGGCTTCTCCCTTTTACCACAATGTTAAAGATCCTAAGGCTGAGTTACTTGACCCTGCAGTCAAAGGAACCCTTAATGTTCTAGGCTCCTGCAAGAAAGCTTCCATTCGAAGAGTTATCGTGACATCATCCATGGCTGCTGTTGCCTACAACGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAGTTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGGAGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAACCCAGCAATGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG]
consensusID : consensus_16660#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 480 fasta sequence
[GCAGGATTCGGCACTNGCTCCACNCCATCTCTCTCGCGCTCTCTCCGGGAGCCAAGGCGANGAAAGCGGCGGTGCGAGACNAGATCNTCGAGTCCGGCGCCCCACCCCCGTCCTTCGGTTCACACNAAAAGGAAGGGAGGAANATTAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAACTGGTGTNCGTCNCCGGCGCGTCNGGGTNCATCNCGTCTTGGCTCGTCAGGNTGCTCCTCCCCCGCGGCTACACGGTCCGCGCCNCCGTCCGGGACACCTCTGACCCAAAGAANACACTACNCCTGCGTGCCCTGGATGGAGCCNACNAAAGACTCCCTTTATTCTNTTNNTATCTNCTGGAANANGGCTCTTTCNATGCTNCNGTCNATGGTTGTGATTGTGTTTTCCCTACNGCTTCTCCTTTTACCACNATGTTTNANATCCTTACGCTGAATTNCTTNACCCTGCCCNTCNNAN]
[+] EMBL AA753021 [GCAGGATTCGGCACTNGCTCCACNCCATCTCTCTCGCGCTCTCTCCGGGAGCCAAGGCGANGAAAGCGGCGGTGCGAGACNAGATCNTCGAGTCCGGCGCCCCACCCCCGTCCTTCGGTTCACACNAAAAGGAAGGGAGGAANATTAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAACTGGTGTNCGTCNCCGGCGCGTCNGGGTNCATCNCGTCTTGGCTCGTCAGGNTGCTCCTCCCCCGCGGCTACACGGTCCGCGCCNCCGTCCGGGACACCTCTGACCCAAAGAANACACTACNCCTGCGTGCCCTGGATGGAGCCNACNAAAGACTCCCTTTATTCTNTTNNTATCTNCTGGAANANGGCTCTTTCNATGCTNCNGTCNATGGTTGTGATTGTGTTTTCCCTACNGCTTCTCCTTTTACCACNATGTTTNANATCCTTACGCTGAATTNCTTNACCCTGCCCNTCNNAN]
consensusID : consensus_16660#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 393 fasta sequence
[GTGAACCCAGCAATGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGGTATGGGGTCAACACCTTAACTAACACATTTCCTTGAATTGAGCTACAGCGTACGTGCCTTCATCCTACAGTAGATTTTTCTTGTGATGCCTACAACAATTTTGCATTTGCCCTTTAGGAGAAACACATATTAGGACAATTATCTAGGACTCGGATAGAAGATAGACATGCTCATGGTATTTCAAGCTACTCTTATTGTTTGGCAACTCACACAAGCACTGTGATATATTTCATATTGAAAAGGAATTCTCCTGTCAATTGCTCATCTAACTAATTGACTTATGAATCCTGAAGCCACAAGCTACATATGG]
[+] EMBL CA997959 [GTGAACCCAGCAATGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGGTATGGGGTCAACACCTTAACTAACACATTTCCTTGAATTGAGCTACAGCGTACGTGCCTTCATCCTACAGTAGATTTTTCTTGTGATGCCTACAACAATTTTGCATTTGCCCTTTAGGAGAAACACATATTAGGACAATTATCTAGGACTCGGATAGAAGATAGACATGCTCATGGTATTTCAAGCTACTCTTATTGTTTGGCAACTCACACAAGCACTGTGATATATTTCATATTGAAAAGGAATTCTCCTGTCAATTGCTCATCTAACTAATTGACTTATGAATCCTGAAGCCACAAGCTACATATGG]
consensusID : consensus_16660#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 306 fasta sequence
[TCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGACACCTCTGACCCAAAGAAAACACTACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTTCGAAGCAAATCTGCTGGAAGAGGGCTCTTTCGATGNTGCGGTCAATGGTTGTANATTGTNTTTTCCATACGGGCTTTNNCCNNTTTACCACAATGTTTAAAGATCNTTAAGGCTTGAGTTACTTTGACCCGNGCAGTCAAAGGGNCNNGGTAANTGTTCTAGGNTTNGTGGCAAGNAAGCTTTTCAATTANGAAGNN]
[+] EMBL AU062682 [TCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGACACCTCTGACCCAAAGAAAACACTACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTTCGAAGCAAATCTGCTGGAAGAGGGCTCTTTCGATGNTGCGGTCAATGGTTGTANATTGTNTTTTCCATACGGGCTTTNNCCNNTTTACCACAATGTTTAAAGATCNTTAAGGCTTGAGTTACTTTGACCCGNGCAGTCAAAGGGNCNNGGTAANTGTTCTAGGNTTNGTGGCAAGNAAGCTTTTCAATTANGAAGNN]
consensusID : consensus_16660#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 166 fasta sequence
[GCTCCACCAACTAAAGAACGGCCATGCACATGAACTTGCATGTCATAGCTAGCTAGTACTCTAGCGGTAACTTTGCATGAACTACTACAGCTGTGGTCTGTACTCTGTACTACGATCTGAAATAAAGTGGAGGCAAATTGCAGTGTGTTGATTATTCTGCCAAAAA]
[+] EMBL AU165107 [GCTCCACCAACTAAAGAACGGCCATGCACATGAACTTGCATGTCATAGCTAGCTAGTACTCTAGCGGTAACTTTGCATGAACTACTACAGCTGTGGTCTGTACTCTGTACTACGATCTGAAATAAAGTGGAGGCAAATTGCAGTGTGTTGATTATTCTGCCAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_16660#2 ----------------------------------------------------CCGGAGCC 8
consensus_16660#5 ------------------------------------------------------------
consensus_16660#3 -------GCAGGATTCGGCACTNGCTCCACNCCATCTCTCTCGCGCTCTCTCCGGGAGCC 53
consensus_16660#1 --TATTACTACTCCTCTTCACCCACTCCACGCCATCTCTCTCGCGCTCTCTCC-GGAGCC 57
consensus_16660#0 GAGTAGAAAACTTTTCTTCACCCACTCCACGCCATCTCTCTCGCGCTCTCTCC-GGAGCC 59
consensus_16660#6 ------------------------------------------------------------
consensus_16660#4 ------------------------------------------------------------
consensus_16660#2 AAGGCGAGGAG------------------GCGGCGGTGCGAGACGAGATCGTCGAGTCCG 50
consensus_16660#5 ------------------------------------------------------------
consensus_16660#3 AAGGCGANGAAA-----------------GCGGCGGTGCGAGACNAGATCNTCGAGTCCG 96
consensus_16660#1 AAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCG 117
consensus_16660#0 AAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCG 119
consensus_16660#6 ------------------------------------------------------------
consensus_16660#4 ------------------------------------------------------------
consensus_16660#2 GCGCCCCAACCCCGTCCTTCGGTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGT 110
consensus_16660#5 ------------------------------------------------------------
consensus_16660#3 GCGCCCCACCCCCGTCCTTCGGTTCACACNAAAAGGAAGGGAGGAANATTAGCTCCGAGT 156
consensus_16660#1 GCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGT 177
consensus_16660#0 GCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGT 179
consensus_16660#6 ------------------------------------------------------------
consensus_16660#4 -----------------------------GTGAACCCAGCAATGGTCATTGGTCCCCTGC 31
consensus_16660#2 CTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCG 170
consensus_16660#5 ------------------------------------------------------------
consensus_16660#3 CTGAGGCGGCGCCCGGGACCGGGAAACTGGTGTNCGTCNCCGGCGCGTCNGGGTNCATCN 216
consensus_16660#1 CTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCG 237
consensus_16660#0 CTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCG 239
consensus_16660#6 ------------------------------------------------------------
consensus_16660#4 TGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGGTATGGGGT 91
consensus_16660#2 CGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCGTCC--- 227
consensus_16660#5 ---------------------TCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCC--- 36
consensus_16660#3 CGTCTTGGCTCGTCAGGNTGCTCCTCCCCCGCGGCTACACGGTCCGCGCCNCCGTCC--- 273
consensus_16660#1 CGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCC--- 294
consensus_16660#0 CGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCC--- 296
consensus_16660#6 ------------------------------------------------------------
consensus_16660#4 CAACACCTTAACTAACACATTTCCTTGAATTGAGCTACAGCGTACGTGCCTTCATCCTAC 151
consensus_16660#2 GGGACACCTCTGACCCAAAGAAAACACTACACCTGCGTGCCCTGGATGGAGCCAACGAA- 286
consensus_16660#5 GGGACACCTCTGACCCAAAGAAAACACTACACCTGCGTGCCCTGGATGGAGCCAACGAA- 95
consensus_16660#3 GGGACACCTCTGACCCAAAGAANACACTACNCCTGCGTGCCCTGGATGGAGCCNACNAA- 332
consensus_16660#1 GGGACACCTCTGACCCAAAGAAAACACTACACCTGCGTGCCCTGGATGGAGCCAACGAA- 353
consensus_16660#0 GGGACACCTCTGACCCAAAGAAAACACTACACCTGCGTGCCCTGGATGGAGCCAACGAA- 355
consensus_16660#6 ---GCTCCACCAACTAAAGAACGGCCATGCACATGAACTTGCATGTCATAGCTAGCTAGT 57
consensus_16660#4 AGTAGATTTTTCTTGTGATGCCTACAACAATTTTGCATTTGCCCTTTAGGAGAAACACA- 210
* * ** * *
consensus_16660#2 AGACTCCATTTATTCGAAGCAAATCTGCTGGAAGAGGGCTCT---TTCGATGCTGCGGTC 343
consensus_16660#5 AGACTCCATTTGTTCGAAGCAAATCTGCTGGAAGAGGGCTCT---TTCGATGNTGCGGTC 152
consensus_16660#3 AGACTCCCTTTATTCTNTTNNTATCTNCTGGAANANGGCTCT---TTCNATGCTNCNGTC 389
consensus_16660#1 AGACTCCATTTGTTCGAAGCAAATCTGCTGGAAGAGGGCTCT---TTCGATGCTGCGGTC 410
consensus_16660#0 AGACTCCATTTGTTCGAAGCAAATCTGCTGGAAGAGGGCTCT---TTCGATGCTGCGGTC 412
consensus_16660#6 ACTCTAGCGGTAACTTTGCATGAACTACTACAGCTGTGGTCTGTACTCTGTACTACGATC 117
consensus_16660#4 -TATTAGGACAATTATCTAGGACTCGGATAGAAGATAGACATGCTCATGGTATTTCAAGC 269
* * * * * * * * * *
consensus_16660#2 AATGGTTGT--GATTGTGTTTTCCATACGG--CTTCTCCCTTTTACCACAATGTT-AAAG 398
consensus_16660#5 AATGGTTGTA-NATTGTNTTTTCCATACGGGCTTTNNCCNNTTTACCACAATGTTTAAAG 211
consensus_16660#3 NATGGTTGT--GATTGTGTTTTCCCTACNG---CTTCTCCTTTTACCACNATGTTTNANA 444
consensus_16660#1 AATGGTTGT--GATTGTGTTTTCCATACGG--CTTCTCCCTTTTACCACAATGTT-AAAG 465
consensus_16660#0 AATGGTTGT--GATTGTGTTTTCCATACGG--CTTCTCCCTTTTACCACAATGTT-AAAG 467
consensus_16660#6 TGAAATAAAGTGGAGGCAAATTGCAGTGTG---TTGATTATTCTGCCAAAAA-------- 166
consensus_16660#4 TACTCTTATTGTTTGGCAACTCACACAAGCA--CTGTGATATATTTCATATTGAAAAGGA 327
* * * * * * * **
consensus_16660#2 ATCCT-AAGGCT-GAGTTACTT-GACCC-TGCAGTCAAAGGAACCC--TTAATGTTCTAG 452
consensus_16660#5 ATCNTTAAGGCTTGAGTTACTTTGACCCGNGCAGTCAAAGGGNCNNGGTAANTGTTCTAG 271
consensus_16660#3 TCCTT--ACGCT-GAATTNCTT-NACCCTGCCCNTCNNAN-------------------- 480
consensus_16660#1 ATCCC-AAGGCT-GAGTTACTT-GACCC-TGCAGTCAAAGGAACCC--TTAATGTTCTAG 519
consensus_16660#0 ATCCT-AAGGCT-GAGTTACTT-GACCC-TGCAGTCAAAGGAACCC--TTAATGTTCTAG 521
consensus_16660#6 ------------------------------------------------------------
consensus_16660#4 ATTCTCCTGTCAATTGCTCATCTAACTAATTGACTTATGAATCCTGAAGCCACAAGCTAC 387
consensus_16660#2 GCTCCT--GCAAGAAAGCTTC-CATTCGAAGAGTTATCGTGACATCATCCATGGCTGCTG 509
consensus_16660#5 GNTTNGTGGCAAGNAAGCTTTTCAATTANGAAGNN------------------------- 306
consensus_16660#3 ------------------------------------------------------------
consensus_16660#1 GCTCCT--GCAAGAAAGCTTC-CATTAGAAGAGTTATCGTGACATCATCCATGGCTGCTG 576
consensus_16660#0 GCTCCT--GCAAGAAAGCTTC-CATTAGAAGAGTTATCGTGACATCATCCATGGCTGCTG 578
consensus_16660#6 ------------------------------------------------------------
consensus_16660#4 ATATGG------------------------------------------------------ 393
consensus_16660#2 TTGCCTACAACGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAG 569
consensus_16660#5 ------------------------------------------------------------
consensus_16660#3 ------------------------------------------------------------
consensus_16660#1 TTGCCTACAATGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAG 636
consensus_16660#0 TTGCCTACAATGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAG 638
consensus_16660#6 ------------------------------------------------------------
consensus_16660#4 ------------------------------------------------------------
consensus_16660#2 TTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGG 629
consensus_16660#5 ------------------------------------------------------------
consensus_16660#3 ------------------------------------------------------------
consensus_16660#1 TTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGG 696
consensus_16660#0 TTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGG 698
consensus_16660#6 ------------------------------------------------------------
consensus_16660#4 ------------------------------------------------------------
consensus_16660#2 AGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAACCCAGCAA 689
consensus_16660#5 ------------------------------------------------------------
consensus_16660#3 ------------------------------------------------------------
consensus_16660#1 AGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAACCCAGCAA 756
consensus_16660#0 AGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAACCCAGCAA 758
consensus_16660#6 ------------------------------------------------------------
consensus_16660#4 ------------------------------------------------------------
consensus_16660#2 TGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGC 749
consensus_16660#5 ------------------------------------------------------------
consensus_16660#3 ------------------------------------------------------------
consensus_16660#1 TGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGC 816
consensus_16660#0 TGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGC 818
consensus_16660#6 ------------------------------------------------------------
consensus_16660#4 ------------------------------------------------------------
consensus_16660#2 TAATCAATGGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG 809
consensus_16660#5 ------------------------------------------------------------
consensus_16660#3 ------------------------------------------------------------
consensus_16660#1 TAATCAATGGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG 876
consensus_16660#0 TAATCAATGGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG 878
consensus_16660#6 ------------------------------------------------------------
consensus_16660#4 ------------------------------------------------------------
consensus_16660#2 ------------------------------------------------------------
consensus_16660#5 ------------------------------------------------------------
consensus_16660#3 ------------------------------------------------------------
consensus_16660#1 ATGTTGCCCTGGCACATATCCTTGCATATGAAGTTCCTTCAGCAAATGGAAGATATTGCA 936
consensus_16660#0 ATGTTGCCCTGGCACATATCCTTGCATATGAAGTTCCTTCAGCAAATGGAAGATATTGCA 938
consensus_16660#6 ------------------------------------------------------------
consensus_16660#4 ------------------------------------------------------------
consensus_16660#2 ------------------------------------------------------------
consensus_16660#5 ------------------------------------------------------------
consensus_16660#3 ------------------------------------------------------------
consensus_16660#1 TGGTTGAAAGAGTTGCGCACTACTCAGAGCTCGTCCAAATCATTCGTGAGATGTATCCCA 996
consensus_16660#0 TGGTTGAAAGAGTTGCGCACTACTCAGAGCTCGTCCAAATCATTCGTGAGATGTATCCCA 998
consensus_16660#6 ------------------------------------------------------------
consensus_16660#4 ------------------------------------------------------------
consensus_16660#2 ------------------------------------------------------------
consensus_16660#5 ------------------------------------------------------------
consensus_16660#3 ------------------------------------------------------------
consensus_16660#1 ATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTAT 1056
consensus_16660#0 ATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTAT 1058
consensus_16660#6 ------------------------------------------------------------
consensus_16660#4 ------------------------------------------------------------
consensus_16660#2 ------------------------------------------------------------
consensus_16660#5 ------------------------------------------------------------
consensus_16660#3 ------------------------------------------------------------
consensus_16660#1 CAAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGG 1116
consensus_16660#0 CAAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGG 1118
consensus_16660#6 ------------------------------------------------------------
consensus_16660#4 ------------------------------------------------------------
consensus_16660#2 ------------------------------------------------------------
consensus_16660#5 ------------------------------------------------------------
consensus_16660#3 ------------------------------------------------------------
consensus_16660#1 AGACCATCGAGAGCTTGAAAGAGAAAGGATTTGTTACTTTTGATTCAAGCAACCTGTAAA 1176
consensus_16660#0 AGACCATCGAGAGCTTGAAANAGAAAGGATTTGTTACTTTTGATTCAAGCAACCTGTAAA 1178
consensus_16660#6 ------------------------------------------------------------
consensus_16660#4 ------------------------------------------------------------
consensus_16660#2 ------------------------------------------------------------
consensus_16660#5 ------------------------------------------------------------
consensus_16660#3 ------------------------------------------------------------
consensus_16660#1 ACAACAGAGCTCCATACACATGAACTTGCTTGTCATAGCTAGTACTCTAGCGGTAACTTT 1236
consensus_16660#0 ACAACAGAGCTCCATACACATGAACTTGCTTGTCATAGCTAGTACTCTAGCGGTAACTTT 1238
consensus_16660#6 ------------------------------------------------------------
consensus_16660#4 ------------------------------------------------------------
consensus_16660#2 ------------------------------------------------------------
consensus_16660#5 ------------------------------------------------------------
consensus_16660#3 ------------------------------------------------------------
consensus_16660#1 GCATGAACTACTACAGATGTGGTCTGTATTCTGTACTACGATCTGAAATAAAGTGGAGGC 1296
consensus_16660#0 GCATGAACTACTACAGATGTGGTCTGTATTCTGTACTACGATCTGAAATAAAGTGGAGGC 1298
consensus_16660#6 ------------------------------------------------------------
consensus_16660#4 ------------------------------------------------------------
consensus_16660#2 ------------------------------------------------------------
consensus_16660#5 ------------------------------------------------------------
consensus_16660#3 ------------------------------------------------------------
consensus_16660#1 AAATTGCAGTGTTGATTAAAAAAAAAAAAAAAAAAAAAATATCATGCCGTTACGTAGCGT 1356
consensus_16660#0 AAATTGCAGTGTTGATTATTCTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1358
consensus_16660#6 ------------------------------------------------------------
consensus_16660#4 ------------------------------------------------------------
consensus_16660#2 -----------------------------
consensus_16660#5 -----------------------------
consensus_16660#3 -----------------------------
consensus_16660#1 ATC-------------------------- 1359
consensus_16660#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1387
consensus_16660#6 -----------------------------
consensus_16660#4 -----------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||