These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16895#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 29 consensus length = 973 fasta sequence [AGGAGTAGGGCATCCAGAATCAGATCCACAAGGCAGCAGCTGCAGCAGCATCGACCATGGCGATGGCGCGATCCATCCTCCTCCTCCTCCTCCTCGCCGCCGCCGCCTCCGCCTCCGCCGACGCGCCCTTCCTCGTCGCGCACAAGAAGGTTTCGCTCTCCCGCCCCAAGCCTGGCGT-CGAGCGCCTCGCCGTCTCCCTCGACCTCTACAACCAGGGATCCGCAACTGCCTATGATGTGAGCATTAATGATGATACTTGGCC-AAAGGAGGCATTTG-AGCTTGTCTCT-GG-AGAGATGTCAAAG-ACATT-GGAAAGGCTTGACCCT-GGTGT-CACTGCTTCGCATGCATTTGTCTTGGAGACCAAAGTACAGGG-CAGGTTTCAAGG-TTCAC-CTG-CGGTTATTACCTATCGTGTTCCCACAAAGGCTGCGCTTCAGGAGGCCTATTCAA-CCCCCATCCT-TGCACTTGATGTTCTTGCTGAGAGGCCTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTTGTGGCGAAGTACGGGTCGCTGGTGTCCGTTGTTGGCTTGGTTGGAGTGTTTATCTACCT-GGTTGCA-AGCCCGTCAAAAT-CCAGCGGTGCAAAAGCAAGCAAGAAGAGGCGTTGATATACTTGCCTACCATATATAAGGCAGTGTTTGTTCTTTTTTATTAAAAAGAGGAAGAGATGGTGGCAGGTTTTTTAGATTGATAGCGCGAGAGCTTTAAGGCTGCCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGTGTTTTTGGAAGTTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATGCATCATTTTGAAGTTGCCTGATAC-AGATACCTATTCATTGCATTTGGTAACAGATGAAATCTCAATGCATCATTTTGAAGTTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CF321966 [AGGAGTAGAAAATCCAGAATCAGATCCACAAGGCAGCAGCTGCAGCAGCATCGACCATGGCGATGGCGCGATCCATCCTCCTCCTCCTCCTCCTCGCCGCCGCCGCCTCCGCCTCCGCCGACGCGCCCTTCCTCGTCGCGCACAAGAAGGTTTCGCTCTCCCG TCCATGCCTGGCGT CGAGCGCCTCGCCGTCTCCCTCGACCTCTACAACCAGGGATCCGCAACTGCCTATGATGTGAGCATTAATGATGATACTTGGCC AAAGGAGGCATTTG AGCTTGTCTCT GG AGAGATGTCAAAG ACATT GGAAAGGCTTGACCCT GGTGT CACTGCTTCGCATGCATTTGTCTTGGAGACCAAAGTACAGGG CAGGTTTCAAGG TTCAC CTG CGGTTATTACCTATCGTGTTCCCACAAAGGCTGCGCTTCAGGAGGCCTATTCAA CCCCCATCCT TGCACTTGAT ] [+] EMBL AK063774 [ ggaAGGGCATCCAGAATCAGATCCACAAGGCAGCAGCTGCAGCAGCATCGACCATGGCGATGGCGCGATCCA TCCTCCTCCTCCTCCTCGCCGCCGCCGCCTCCGCCTCCGCCGACGCGCCCTTCCTCGTCGCGCACAAGAAGGTTTCGCTCTCCCGCCCCAAGCCTGGCGT CGAGCGCCTCGCCGTCTCCCTCGACCTCTACAACCAGGGATCCGCAACTGCCTATGATGTGAGCATTAATGATGATACTTGGCC AAAGGAGGCATTTG AGCTTGTCTCT GG AGAGATGTCAAAG ACATT GGAAAGGCTTGACCCT GGTGT CACTGCTTCGCATGCATTTGTCTTGGAGACCAAAGTACAGGG CAGGTTTCAAGG TTCAC CTG CGGTTATTACCTATCGTGTTCCCACAAAGGCTGCGCTTCAGGAGGCCTATTCAA CCCCCATCCT TGCACTTGATGTTCTTGCTGAGAGGCCTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTTGTGGCGAAGTACGGGTCGCTGGTGTCCGTTGTTGGCTTGGTTGGAGTGTTTATCTACCT GGTTGCA AGCCCGTCAAAAT CCAGCGGTGCAAAAGCAAGCAAGAAGAGGCGTTGATATACTTGCCTACCATATATAAGGCAGTGTTTGTTCTTTTTTATTAAAAAGAGGAAGAGATGGTGGCAGGTTTTTTAGATTGATAGCGCGAGAGCTTTAAGGCTGCCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGTGTTTTTGGAAGTTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATGCATCATTTTGAAGTTGCCTGATAC AGATACCTATTCATTGCATTTGGTAACAGATGAAATCTCAATGCATCATTTTG ] [+] EMBL AU082421 [ cGGGCATCCAGAATCAGATCCACAAGGCAGCAGCTGCAGCAGCATCGACCATGGCGATGGCGCGATCCATCCTCCTCCTCCTCCTCCTCGCCGCCGCCGCCTCCGCCTCCGCCGACGCGCCCTTCCTCGTCGCGCACAAGAAGGTTTCGCTCTCCCGCCCCAAGCCTGGCGT CGAGCGCCTCGCCGTCTCCCTCGACCTCTACAACCAGGGATCCGCAACTGCCTATGATGTGAGCATTAATGATGATACTTGGCC AAAGGAGGCATTTG AGCTTGTCTCT GG AGAGATGTCAAAG ACATT GGAAAGGCTTGACCCT GGTGT CACTGCTTCG ATGCATTTGTCTTGGAGA ] [+] EMBL CF334127 [ CCAGAATCAGATCC CAAGGCAGCAGCTGCAGCAGCATCGACCATGGCGATGGCGCGATCCATCCTCCTCCTCCTCCTCCTCGCCGCCGCCGCCTCCGCCTCCGCCGACGCGCCCTTCCTCGTCGCGCACAAGAAGGTTTCGCTCTCCCGCCCCAAGCCTGGCGT CGAGCGCCTCGCCGTCTCCCTCGACCTCTACAACCAGGGATCCGCAACTGCCTATGATGTGAGCATTAATGATGATACTTGGCC AAAGGAGGCATTTG AGCTTGTCTCT GG AGAGATGTCAAAG ACATT GGAAAGGCTTGACCCT GGTGT CACTGCTTCGCATGCATTTGTCTTGGAGACCAAAGTACAGGG CAGGTTTCAAGG TTCAC CTG CGGTTATTACCTATCGTGTTCCCACAAAGGCTGCGCTTCAGGAGGCCTATTCAA CCCCCATCCT TGCACTTGATGTTCTTGCTGAG ] [+] EMBL CF291010 [ CCAGAATCAGATCCACAAGGCAGCAGCTGCAGCAGCATCGACCATGGCGATGGCGCGATCCATCCTCCTCCTCCTCCTCCTCGCCGCCGCCGCCTCCGCCTCCGCCGACGCGCCCTTCCTCGTCGCGCACAAGAAGGTTTCGCTCTCCCGCCCCAAGCCTGGCGT CGAGCGCCTCGCCGTCTCCCTCGACCTCTACAACCAGGGATCCGCAACTGCCTATGATGTGAGCATTAATGATGATACTTGGCC AAAGGAGGCATTTG AGCTTGTCTCT GG AGAGATGTCAAAG ACATT GGAAAGGCTTGACCCT GGTGT CACTGCTTCGCATGCATTTGTCTTGGAGACCAAAGTACAGGG CAGGTTTCAAGG TTCAC CTG CGGTTATTACCTATCGTGTTCCCACAAAGGCTGCGCTTCAGGAGGCCTATTCAA CCCCCATCCT TGCACTTGATGTTCTTGC ] [+] EMBL CF291854 [ CAGAATCAGATCCACAAGGCAGCAGCTGCAGCAGCATCGACCATGGCGATGGCGCGATCCA TCCTCCTCCTCCTCCTCGCCGCCGCCGCCTCCGCCTCCGCCGACGCGCCCTTCCTCGTCGCGCACAAGAAGGTTTCGCTCTCCCGCCCCAAGCCTGGCGT CGAGCGCCTCGCCGTCTCCCTCGACCTCTACAACCAGGGATCCGCAACTGCCTATGATGTGAGCATTAATGATGATACTTGGCC AAAGGAGGCATTTG AGCTTGTCTCT GG AGAGATGTCAAAG ACATT GGAAAGGCTTGACCCT GGTGT CACTGCTTCGCATGCATTTGTCTTGGAGACCAAAGTACAGGG CAGGTTTCAAGG TTCAC CTG CGGTTATTACCTATCGTGTTCCCACAAAGGCTGCGCTTCAGGAGGCCTATTCAA CCCCCATCCT TGCACTTGATGTTCTTGCTGAGAGGCCTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTTGTGGCGAAGT ] [+] EMBL CF339396 [ CAGAATCAGATCCAC AGGCAGCAGCTGCAGCAGCATCGACCATGGCGATGGCGCGATCCATCCTCCTCCTCCTCCTCCTCGCCGCCGCCGCCTCCGCCTCCGCCGACGCGCCCTTCCTCGTCGCGCACAAGAAGGTTTCGCTCTCCCGCCCCAAGCCTGGCGT CGAGCGCCTCGCCGTCTCCCTCGACCTCTACAACCAGGGATCCGCAACTGCCTATGATGTGAGCATTAATGATGATACTTGGCC AAAGGAGGCATTTG AGCTTGTCTCT GG AGAGATGTCAAAG ACATT GGAAAGGCTTGACCCT GGTGT CACTGCTTCGCATGCATTTGTCTTGGAGACCAAAGTACAGGG CAGGTTTCAAGG TTCAC CTG CGGTTATTACCTATCGTGTTCCCACAAAGGCTGCGCTTCAGGAGGCCTATTCAA CCCCCATCCT TGCACTTGATGTTCTTGCTGAGAGGCCTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTTGTGGCGAAGTACGGGTCGCTGGTGTCCGTTGTTGGCTTGGTTGGAGTGTTTATCTACCT GGTTGCA AGCCCGTCAAAAT CCAGCGGTGCAAAAGCAAGCAAGAAGAGGCGTTGATATACTTGCCT ] [+] EMBL AK099360 [ TCAGATCCACAAGGCAGCAGCTGCAGCAGCATCGACCATGGCGATGGCGCGATCCATCCTCCTCCTCCTCCTCCTCGCCGCCGCCGCCTCCGCCTCCGCCGACGCGCCCTTCCTCGTCGCGCACAAGAAGGTTTCGCTCTCCCGCCCCAAGCCTGGCGT CGAGCGCCTCGCCGTCTCCCTCGACCTCTACAACCAGGGATCCGCAACTGCCTATGATGTGAGCATTAATGATGATACTTGGCC AAAGGAGGCATTTG AGCTTGTCTCT GG AGAGATGTCAAAG ACATT GGAAAGGCTTGACCCT GGTGT CACTGCTTCGCATGCATTTGTCTTGGAGACCAAAGTACAGGG CATGTTTC AGG TTCAC CTG CGGTTATTACCTATCGTGTTCCCACAAAGGCTGCGCTTCAGGAGGCCTATTCAA CCCCCATCCT TGCACTTGATGTTCTTGCTGAGAGGCCTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTTGTGGCGAAGTACGGGTCGCTGGTGTCCGTTGTTGGCTTGGTTGGAGTGTTTATCTACCT GGTTGCA AGCCCGTCAAAAT CCAGCGGTGCAAAAGCAAGCAAGAAGAGGCGTTGATATACTTGCCTACCATATATAAGGCAGTGTTTGTTCTTTTTTATTAAAAAGAGGAAGAGATGGTGGCAGGTTTTTTAGATTGATAGCGCGAGAGCTTTAAGGCTGCCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGTGTTTTTGGAAGTTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATGCATCATTTTGAAGTTGCCTGATAC AGATACCTATTCATTGCATTTGGTAACAG ] [+] EMBL AK099081 [ TCAGATCCACAAGGCAGCAGCTGCAGCAGCATCGACCATGGCGATGGCGCGATCCATCCTCCTCCTCCTCCTCCTCGCCGCCGCCGCCTCCGCCTCCGCCGACGCGCCCTTCCTCGTCGCGCACAAGAAGGTTTCGCTCTCCCGCCCCAAGCCTGGCGT CGAGCGCCTCGCCGTCTCCCTCGACCTCTACAACCAGGGATCCGCAACTGCCTATGATGTGAGCATTAATGATGATACTTGGCC AAAGGAGGCATTTG AGCTTGTCTCT GG AGAGATGTCAAAG ACATT GGAAAGGCTTGACCCT GGTGT CACTGCTTCGCATGCATTTGTCTTGGAGACCAAAGTACAGGG CAGGTTTCAAGG TTCAC CTG CGGTTATTACCTATCGTGTTCCCACAAAGGCTGCGCTTCAGGAGGCCTATTCAA CCCCCATCCT TGCACTTGATGTTCTTGCTGAGAGGCCTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTTGTGGCGAAGTACGGGTCGCTGGTGTCCGTTGTTGGCTTGGTTGGAGTGTTTATCTACCT GGTTGCA AGCCCGTCAAAAT CCAGCGGTGCAAAAGCAAGCAAGAAGAGGCGTTGATATACTTGCCTACCATATATAAGGCAGTGTTTGTTCTTTTTTATTAAAAAGAGGAAGAGATGGTGGCAGGTTTTTTAGATTGATAGCGCGAGAGCTTTAAGGCTGCCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGTGTTTTTGGAAGTTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATGCATCATTTTGAAGTTGCCTGATAC AGATACCTATTCAT ] [+] EMBL OSC1981 [ ATCCACAAGGCAGCAGCTGCAGCAGCATCGACCATGGCGATGGCGCGATCCATCCTCCTCCTCCTCCTCCTCGCCGCCGCCGCCTCCGCCTCCGCCGACGCGCCCTTCCTCGTCGCGCACAAGAAGGTTTCGCTCTCCCGCCCCAAGCCTGGCGTNCGAGCG CTNGNCGTCTCCCTCGACCTNTACAACCAGGGATCCGCAACTTNCTATGATGTGAGCATTAATGATGATACTTGGCC AAAGGAGGCATTTG AGCTTGTCTCTGGG AGAGATGTCAAAG ACATT GGAAAGGCTTGANCCTNGGTGT CACTGCTTCG ATGCATTTGTCTTGGAGANCA ] [+] EMBL AU069042 [ CCACAAGGCAGCAGCTGCAGCAGCATCGACCATGGCGATGGCGCGATCCATCCTCCTCCTCCTCCTCCTCGCCGCCGCCGCCTCCGCCTCCGCCGACGCGCCCTTCCTCGTCGCGCACAAGAAGGTTTCGCTCTCCCGCCCCAAGCCTGGCGT CGAGCGCCTCGCCGTCTCCCTCGACCTCTACAACCAGGGATCCGCAACTGCCTATGATGTGAGCATTAATGATGATACTTGGCC AAAGGAGGCATTTG AGCTTGTCTCT GG AGAGATGTCAAAG ACATT GGAAAGGCTTGACCCT GGTGT CACTGCTTCGCATGCATTTGTCTTGGAGACCAAAGTACAGGG CAGGTTTCAAGG TTCAC CTG CGGTTATTACCTATCGTGTTCCCACAAAGGCTGCGCTTCAGGAGGCCTAT ] [+] EMBL AU068175 [ ACAAGGCAGCAGCTGCAGCAGCATCGACCATGGCGATGGCGCGATCCATCCTCCTCCTCCTCCTCCTCGCCGCCGCCGCCTCCGCCTCCGCCGACGCGCCCTTCCTCGTCGCGCACAAGAAGGTTTCGCTCTCCCGCCCCAAGCCTGGCGT CGAGCGCCTCGCCGTCTCCCTCGACCTCTACAACCAGGGATCCGCAACTGCCTATGATGTGAGCATTAATGATGATACTTGGCC AAAGGAGGCATTTG AGCTTGTCTCT GG AGAGATGTCAAAG ACATT GGAAAGGCTTGACCCT GGTGT CACTGCTTCGCATGCATTTGTCTTGGAGACCAAAGTACAGGG CAGGTTTCAAGG TTCAC CTG CGGTTATTACCTAT ] [+] EMBL AU082343 [ GGCAGCAGCTGCAGCAGCATCGACCATGGCGATGGCGCGATCCATCCTCCTCCTCCTCCTCCTCGCCGCCGCCGCCTCCGCCTCCGCCGACGCGCCCTTCCTCGTCGCGCACAAGAAGGTTTCGCTCTCCCGCCCCAAGCCTGGCGT CGAGCGCCTCGCCGTCTCCCTCGACCTCTACAACCAGGGATCCGCAACTGCCTATGATGTGAGCATTAATGATGATACTTGGCC AAAGGAGGCATTTG AGCTTGTCTCT GG AGAGATGTCAAAG ACATT GGAAAGGCTTGACCCT GGTGT CACTGCTTCGCATGCATTTGTCTTGGAGACCAAAGTACAGGG CAGGTTTCAAGG TTCAC CTG CGGTTATTACCTATCGTGTTCCCACAAAGGC ] [+] EMBL OS12562A [ GCAGCTGCAGCAGCATCGACCATGGCGATGGCGCGATCCATCCTCCTCCTCCTCCTCCTCGCCGCCGCCGCCTNCGCCTCCGCCGACGCGCCCTTNCTCGTCGCGCACAAGAAGGTTTCGCTCTCCCGCCCCAAGCCTGGCGT CGAGCGCCTCGNCGTCTNCCTCGACCTCTACAACCAGGGATCCGCAACTGCCTATGATGTGAGCATTAATGATGATACTTGGNC AAAGGAGGCATTTG AGCTTCTCTNT GGAAGACATGTCAAAG ACATTGGGAAAGGCTTGACCCT GGTGT CACTGCTTNGTATGCATTTGTTTTNGAGA CAAAGTACA ] [+] EMBL OSR18451A [ AGCTGCAGCAGCATCGACCATGGCGATGGCGCGATCCATCCTCCTCCTCCTCCTCCTCGCCGCCGCCGNCTCCGCCTCCGCCGACGCGCCCTTCCTCGTCGCGCACAAGAAGGTTTCGCTCTCCCGNCCCAAGCCTGGCGT CGAGCGCCTNGCCGNCTCCCTCGACCTNTACAACCAGGGATCCGNAACTGACTATNATGTGAGCA ] [+] EMBL CF305517 [ TGCAGCAGCATCGACCATGGCGATGGCGCGATCCATCCTCCTCCTCCTCCTCCTCGCCGCCGCCGCCTCCGCCTCCGCCGACGCGTCCTTCCTCGTCGCGCACAAGAAGGTTTCGCTCTCCCGCCCCAAGCCTGGCGT CGAGCGCCTCGCCGTCTCCCTCGACCTCTACAACCAGGGATCCGCAACTGCCTATGATGTGAGCATTAATGATGATACTTGGCC AAAGGAGGCATTTG AGCTTGTCTCT GG AGAGATGTCAAAG ACATT GGAAAGGCTTGACCCT GGTGT CACTGCTTCGCATGCATTTGTCTTGGAGACCAAAGTACAGGG CAGGTTTCAAGG TTCAC CTG CGGTTATTACCTATCGTGTTCCCACAAAGGCTGCGCTTCAGGAGGCCTATTCAA CCCCCATCCT TGCACTTGATGTTCTTGCTGAGAGGCCTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTTGT ] [+] EMBL AU068019 [ GCATCGACCATGGCGATGGCGCGATCCATCCTCCTCCTCCTCCTCCTCGCCGCCGCCGCCTCCGCCTCCGCCGACGCGCCCTTCCTCGTCGCGCACAAGAAGGTTTCGCTCTCCCGCCCCAAGCCTGGCGT CGAGCGCCTCGCCGTCTCCCTCGACCTCTACAACCAGGGATCCGCAACTGCCTATGATGTGAGCATTAATGATGATACTTGGCC AAAGGAGGCATTTG ANCTTGTCTCT GG AGAGATGTCAAAG ACATT GGAAAGGCTTGACCCT GGTGT CACTGCTTCGCATGCATTTGTCTTGGAGACCAAAGTACAGGG CAAGTTTCAAAG TTCA CTG CGGNTATTA CTATCGTGTTnc ] [+] EMBL AU068020 [ tTCGCCGTNTCCCTCGACTTNTACAACCAGGNATCCGCAACTGCCTATGATGTGAGCATTAATGATGATACTTGGCCAAAAGGAGGCATTTG AGCTTGTCTCT GG AGAGATGTCAAAG ACATT GGAAAGGCTTGACCCT GGTGTCCACTG TTCGCATGCATTTGTCTTGGAGACCAAAGTACAGGG CAGGTTTCAAGGTTTCA CTG CGGTTATTACCTATCGTGTTCCCACAAA GNTGCGCTTCAGGAGGCCTATTCAA CCCCCATCCT TGCACTTGATGTTCTTGCTGAGAGGCCTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTTGTGGCGAAGTACGGGTCGCTGGTGTCCGTTGTTGGCTTGGTTGGAGTGTTTATCTACCT GGTTGCA AGCCCGTCAAAAT CCAGCGGTGCAAAAGCAAGCAAGAAGAGGCGTTGATATACTTGCCTACCATATATAAGGCAGTGTTTGTTCTTTTTTATTAAAAAGAGGAAGAGATGGTGGCAGGTTTTTTAGATTGATAGCGCGAGAGCTTTAAGGCTGCCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGTGTTTTTGGAAGTTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATGCATCATTTTGAAGTTGCCTGAaaa aaa ] [+] EMBL AA750695 [ AGGCATTTGAAGCTTGTCTC GG AGAGATGTCAAAGAACATT GGAAAGGCTTGACCCT GGTGT CACTGCTTCGCATGCATTTGTCTTGGAGACCAAAGTACAGGG CAGGTTTCAAGG TTCAC CTG CGGTTATTACCTATCGTGTT CCACAAAGGCTGCGCTTCAGGAGG CTATTC A CCCCCATCCT TGCACTTAATGTTC TGCTGAGAGG CT CAG AAAG AGTTga ] [+] EMBL AA750539 [ ATTTA AGCTTGTCTCT GG AGAGATGTCAAAG ACATT GGAAAGGCTTGACCCT GGTGT CACTGCTTCGCATGCATTTATCTTGGAGACCAAAGTACAGGG CAGGTTTCAAGG TTCAC CTG CGGTTATTACCTATCGTGTTCCCACAAAGGCTGCGCTTCAGGAGGCCTATTCAA CCCCCATCCT TGCACTTAATGTTCTTGCTGAGAGGCCTCCAGAAAAGAAGT ] [+] EMBL BI797754 [ GACCAAAGTACAGGG CAGGTTTCAAGG TTCACACTGCCGGTTATTACCTATCGTGTTCCCACAAA GCTGCGCTTCAGGA GCCTATTCAA CCCCCATCCTGTGCACTTGATGTTCTTGCTGAGAGGCCTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTTGTGGCGAAGTAC GGTCGCTGGTGTCCCTTGTTGGCTTGGTTGGAGTGTTTATCTACCT GGTTGCATAGCCCGTCAAAAT CCA CGGT CATAAACAAGCAAGAAGAGGC TTGATATACTTGCCTACCATATATAAGGCAGTGTTTGTTCTTTTTTATTAAAAAGAGGAAGAGATGGT GCAGGTTTTTTAGATTGATAGCGCGAGAGCTTTAAGCCCTCCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGT TTTTTGGAA TTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATG AATCGCAATGCATCATTTTGAA TTGCCTGATAC AGATACCTATTCATTGCATTTGGTAACAGATGAAATCTCAATG ] [+] EMBL C96978 [ CAGGGCCAGGTTTCAAGG TTCNC CTG CGGTTATTACCTATCGTGTTCCCNCAAAGG TGCGCTTCAGGAGGCCTATTNAA CCCCCATCCT TGCACTTGATGTTCTTGCTGAGAGGCCTCCAGAAAAGAAGTTTGAATGGGCTAANAGGCTTNTGGCGAAGTNCGGGTCGCTGGTGNCCGTTGTTGGCTTGGTTGGAGTGTTTATCTACCT GGTTGCA AGCCCGTCAAAAT CCAGCGGTGCAAAAGCAAGCAAGAAGAGGCGTTGATATACTTGCCTACCATATATAAGGCAGTGTTTGTTCTTTTTTATTAAAAAGAGGAAGAGATGGTGGCAGGTTTTTTAGATTGATAGCGCGAGAGCTTTAAGGCTGCCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGTGTTTTTGGAAGTTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATGCATCATTTTGAAGTTGCCTGATAC AGATACCTATTCATTGCATTTGGTAACAGATGAAATCTCAATGCATCATTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL BI805682 [ AGG TTCAC CT CGGTTA TACCTATCGTGTTCCCACAAAGGCTGCGCTTCAGGA GCCTATTCAACCCCCCATCCT TGCACTTGATGTTCTTGCTGAGAGGCCTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTTGTGGCGAAGTACGGGTCGCTGGTGTCCGTTGTTGGCTTGGTTGGAGTGTTTATCTACCT GGTTGCA AGCCCGTC AAAT CCAGCGGTGC AAAGCAAGCAAGAAGAGGCGTTGATATACTTGCCTACCATATATAAGGCAGTGTTTGTTCTTTTTTATTAAAAAGAGGAAGAGATGGTGGCAGGTTTTTTAGATTGATAGCGCGAGAGCTTTAAGGCTGCCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGTGTTTTTGGAAGTTGCNAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATGCATCATTTTGAAGTTGCCTGATAC AGATACCTATTCATTGCATTTGGTAACAGATGAAATCTCAATGCATCATTTTGAAGTTGCCTGATACCAAAAAAAAAA ] [-] EMBL CF321967 [ CATCCT TGCACTTGATGTTCTTGCTGAGAGGCCTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTTGTGGCGAAGTACGGGTCGCTGGTGTCCGTTGTTGGCTTGGTTGGAGTGTTTATCTACCT GGTTGCA AGCCCGTCAAAAT CCAGCGGTGCAAAAGCAAGCAAGAAGAGGCGTTGATATACTTGCCTACCATATATAAGGCAGTGTTTGTTCTTTTTTATTAAAAAGAGGAAGAGATGGTGGCAGGTTTTTTAGATTGATAGCGCGAGAGCTTTAAGGCTGCCGCATCCTTGAACTGANTGAATTATCTCTGTTTGTGTTTTTGGAAGTTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATGCATCATTTTGAAGTTGCCTGATAC AGATACCTATTCATTGCATTTGGTAAaaaaa ] [-] EMBL CF334128 [ ATGTTCTTGCTGAGAGGCCTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTTGTGGCGAAGTACGGGTCGCTGGTGTCCGTTGTTGGCTTGGTTGGAGTGTTTATCTACCT GGTTGCA AGCCCGTCAAAAT CCAGCGGTGCAAAAGCAAGCAAGAAGAGGCGTTGATATACTTGCCTACCATATATAAGGCAGTGTTTGTTCTTTTTTATTAAAAAGAGGAAGAGATGGTGGCAGGTTTTTTAGATTGATAGCGCGAGAGCTTTAAGGCTGCCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGTGTTTTTGGAAGTTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATGCATCATTTTGAAGTTGCCTGATAC AGATACCTATTCATTGCATTTGGTAAaaaaa ] [+] EMBL AU031707 [ GGTCGCTGGTGTCCGTTGTTGGCTTGGTTGGAGTGTTTATCTACCTGGGTTGCA AGCCCGTNAAAATCCCAGCGGTGCAAAAGCAAGCAAGAAGAGGCGTTGATATACTTGCCTACCATATATAAGGCAGTGTTTGTNCTTTTTTATTAAAAAGAGGAAGAGATGGTGGCAGGTTTTTTAGATTGATAGCGCGAGAGCTTTAAGG TGCCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGTGTTTTTGGAAGTTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATGCATCATTTTGAAGTTGCCTGATAC AGATACCTATTCA TGCATTTGGTAACAGATGAAATCTCAATGC TCA TNTGANGTTGCCAAAAAAAAAAAAAAAAAAAn ] [+] EMBL CF308586 [ TATTAAAAAGAGGAAGAGATGGTGGCAGGTTTTTTAGATTGATAGCGCGAGAGCTTTAAGGCTGCCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGTGTTTTTGGAAGTTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATGCATCATTTTGAAGTTGCCTGATAC AGATACCTATTCATTGCATTTGGTAACAGATGAAATCTCAATGCATCATTTTGAAaaaaa ] [+] EMBL AU184064 [ TGGTGGCAGGTTTTTTAGATTGATAGCGCGAGAGCTTTAAGGCTGCCGCATCCTTGAACTGTATGAATTTTNTCTGTTTGNGTTTTTGGAAGTTGAAAACCTAACCCANAGAATTGGAGAGTAGATTTTGTAACAGATGAAATNTCAATGCATCNTTTTGAAGTTGCCTGATACAAGATACCTATTCATTGCATTTGGTAACAGATGAAATNTCAATGCATCATTTTGAAGTTGCCCAAAAAAAAAAAAAAAAAAAAAAAAAAA ] [+] EMBL CF298179 [ ATAC AGATACCTATTCATTGCATTTGGTAACAGATGAAATCTCAATGCATCATTTTGAAGTTGCCTGATAAAAAAAAAAAAAAAAAAAAAAAAA ] consensusID : consensus_16895#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 853 fasta sequence [CAGCATCGACCATGGCGATGGCGCGATCCATCCTCCTCCTCCTCCTCCTCGCCGCCGCCGCCTCCGCCTCCGCCGACGCGCCCTTCCTCGTCGCGCACAAGATGTCAAAGACATTGGAAAGGCTTGACCCTGGTGTCACTGCTTCGCATGCATTTGTCTTGGAGACCAAAGTACAGGGCAGGTTTCAAGGTTCACCTGCGGTTATTACCTATCGTGTTCCCACAAAGGCTGCGCTTCAGGAGGCCTATTCAACCCCCATCCTTGCACTTGATGTTCTTGCTGAGAGGCCTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTTGTGGCGAAGTACGGGTCGCTGGTGTCCGTTGTTGGCTTGGTTGGAGTGTTTATCTACCTGGTTGCAAGCCCGTCAAAATCCAGCGGTGCAAAAGCAAGCAAGAAGAGGCGTTGATATACTTGCCTACCATATATAAGGCAGTGTTTGTTCTTTTTTATTAAAAAGAGGAAGAGATGGTGGCAGGTTTTTTAGATTGATAGCGCGAGAGCTTTAAGGCTGCCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGGGTTTTTGAAAGTTGAAACCTACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATGCATCATTTTGAAATTGCCTGGAAANAAAAAAAAACAGCAGAGTATCTCCGCGCAAAATATATAAAGATNTAAGTATGGAGGGACGCGCGGCAGGGAAAATACAACGTGGAGAAAGCTGATTTAGTACGCGCTCGCAGGCGTTCTATGAATGGATGATAATTCCGGGGGGGGGAGGCGGGGGGANACANCCGGCCTATATTGGAGGGGG] [+] EMBL CA758886 [CAGCATCGACCATGGCGATGGCGCGATCCATCCTCCTCCTCCTCCTCCTCGCCGCCGCCGCCTCCGCCTCCGCCGACGCGCCCTTCCTCGTCGCGCACAAGATGTCAAAGACATTGGAAAGGCTTGACCCTGGTGTCACTGCTTCGCATGCATTTGTCTTGGAGACCAAAGTACAGGGCAGGTTTCAAGGTTCACCTGCGGTTATTACCTATCGTGTTCCCACAAAGGCTGCGCTTCAGGAGGCCTATTCAACCCCCATCCTTGCACTTGATGTTCTTGCTGAGAGGCCTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTTGTGGCGAAGTACGGGTCGCTGGTGTCCGTTGTTGGCTTGGTTGGAGTGTTTATCTACCTGGTTGCAAGCCCGTCAAAATCCAGCGGTGCAAAAGCAAGCAAGAAGAGGCGTTGATATACTTGCCTACCATATATAAGGCAGTGTTTGTTCTTTTTTATTAAAAAGAGGAAGAGATGGTGGCAGGTTTTTTAGATTGATAGCGCGAGAGCTTTAAGGCTGCCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGGGTTTTTGAAAGTTGAAACCTACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATGCATCATTTTGAAATTGCCTGGAAANAAAAAAAAACAGCAGAGTATCTCCGCGCAAAATATATAAAGATNTAAGTATGGAGGGACGCGCGGCAGGGAAAATACAACGTGGAGAAAGCTGATTTAGTACGCGCTCGCAGGCGTTCTATGAATGGATGATAATTCCGGGGGGGGGAGGCGGGGGGANACANCCGGCCTATATTGGAGGGGG] consensusID : consensus_16895#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 714 fasta sequence [ACTGCCGGTAAAATTTATTGCAGAACTGCCTATGATGTGAGCATTAATGATGATACTTGGCCAAAGGAGGCATTTGAGTTTGTTTTTGGAGAGATGTCAAAGACATTGGAAAGGCTTGACCCTGGTGTCACTGTTTGGCATGCATTTGTCTTGGAGACCAAAGTACAGGGCAGGTTTCAAGGTTCACCTGCGGTTATTACTTATAGTGTTCCCACAAAGGGTGCGCTTCAGGAGGCGTATTCAACCCCCATCCTTGCAATTGATGTTTTTGTTGAGAGGCCTCCAGAAAAGAAGTTTGAATGGGTTAAGAGGTTTGTGGCGAAGTACGGGTCGCTGGTGTCCGTTTTTGGTTTGGTTGGAGTGTTTATTTACCTGGTTGCAAGCCCGTCAAAATCCAGCGGTGCAAAAGCAAGCAAGAAGAGGGGTTGATATACTTGCCTACCATATATAAGGCAGGGTTTGTTTTTTTTTATTAAAAAGAGGAAGAGATGGTGGCAGGTTTTTTAGATTGATAGCGGGAGAGTTTTAAGGCTGCCGCATCCTTGAACTGTATGAATTTTTTTTGTTTGTGTTTTTGGAAGTTGAAAACCTAACCCAGAGAATTGGA-GAGTAGATTTTGTAACAGATGAAATTTCAATGCATCATTTTGAAGTGGCCTGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAAAAAAAAAAAAAAAAAA] [-] EMBL CB617738 [ACTGCCGGTAAAATTTATTGCAGAACTGCCTATGATGTGAGCATTAATGATGATACTTGGCCAAAGGAGGCATTTGAGTTTGTTTTTGGAGAGATGTCAAAGACATTGGAAAGGCTTGACCCTGGTGTCACTGTTTGGCATGCATTTGTCTTGGAGACCAAAGTACAGGGCAGGTTTCAAGGTTCACCTGCGGTTATTACTTATAGTGTTCCCACAAAGGGTGCGCTTCAGGAGGCGTATTCAACCCCCATCCTTGCAATTGATGTTTTTGTTGAGAGGCCTCCAGAAAAGAAGTTTGAATGGGTTAAGAGGTTTGTGGCGAAGTACGGGTCGCTGGTGTCCGTTTTTGGTTTGGTTGGAGTGTTTATTTACCTGGTTGCAAGCCCGTCAAAATCCAGCGGTGCAAAAGCAAGCAAGAAGAGGGGTTGATATACTTGCCTACCATATATAAGGCAGGGTTTGTTTTTTTTTATTAAAAAGAGGAAGAGATGGTGGCAGGTTTTTTAGATTGATAGCGGGAGAGTTTTAAGGCTGCCGCATCCTTGAACTGTATGAATTTTTTTTGTTTGTGTTTTTGGAAGTTGAAAACCTAACCCAGAGAATTGGA GAGTAGATTTTGTAACAGATGAAATTTCAATGCATCATTTTGAAGTGGCCTGATAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAGAGA ] [-] EMBL CF298045 [ atgggTTGAAGGAGTAGATTTTGTAACAAATGAAATTTCAAGGCATCATTTTGAAGTGGCCTGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CF322358 [ g GAGTAGATTTTGT TCAGATGAAATCTCAATGCATCATTTTGAAGTTGCCTGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA ] consensusID : consensus_16895#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 692 fasta sequence [CTTGCCGTCTCCCTCGACCTCTACAACCAGGGATCCGCAACTGCCTATGATGTGAGCATTAATGATGATACTGGGCCAAAGGAGGCATNTGAGCTTG-TCTCT-GGAGAGATGTCAAAGA-CATTGG-AAAGGCTT-GACCCTGGTGT-CA-CTG-C-TTCG-CA-TGCATTT--GTCTTGGAGACCAAAGTACAGGGCAGGTTTCAAGG-TTCACCTGCGGTTATTACCTATCGTGTTCCCACAAAGGCTGCGCTTCAGGAGGCCT-ATTCAA-CCCCCATCCTTGCACTTGATGTTCTTGCTGAGAGGCCTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTT-GTGGCGA-AGTA-CGGGTCGCTGGTGT-CCGTT-GTTGGCTTGGTTGGAGTGTTT-ATCTACCTGGTTGCAAGCCCGTCAAAATCCAGCGGTGCAAAAGCAAGCAAGAAGAGG-CGTTGATATACTTGCCTACCATATATAAGGCA-GTGTTTGTTCTTTT-TTA-TTA-AAAAGAGGAAGAGATGGTGGCA-GG-TTT-TTTAGATTGATAGCGCGAGAGCTTTAAGGCTG-CCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGTGTTTTTGGAAGTTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATGCATCATTTTGAAGTTGCCTGATACAAAAAAAAAAAAAA] [-] EMBL CA763424 [CTTGCCGTCTCCCTCGACCTCTACAACCAGGGATCCGCAACTGCCTATGATGTGAGCATTAATGATGATACTGGGCCAAAGGAGGCATNTGAGCTTG TCTCT GGAGAGATGTCAAAGA CATTGG AAAGGCTT GACCCTGGTGT CA CTG C TTCG CA TGCATTT GTCTTGGAGACCAAAGTACAGGGCAGGTTTCAAGG TTCACCTGCGGTTATTACCTATCGTGTTCCCACAAAGGCTGCGCTTCAGGAGGCCT ATTCAA CCCCCATCCTTGCACTTGATGTTCTTGCTGAGAGGCCTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTT GTGGCGA AGTA CGGGTCGCTGGTGT CCGTT GTTGGCTTGGTTGGAGTGTTT ATCTACCTGGTTGCAAGCCCGTCAAAATCCAGCGGTGCAAAAGCAAGCAAGAAGAGG CGTTGATATACTTGCCTACCATATATAAGGCA GTGTTTGTTCTTTT TTA TTA AAAAGAGGAAGAGATGGTGGCA GG TTT TTTAGATTGATAGCGCGAGAGCTTTAAGGCTG CCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGTGTTTTTGGAAGTTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATGCATCATTTTGAAGTTGCCTGATCCAAAAAAAAAAAAAA] [+] EMBL AU070175 [ TTG TCTCT GGAGAGATGTCAAAGA CATTGG AAAGGCTT GACCCTGGTGT CA CTG C TTCG CA TGCATTT GTCTTGGAGACCAAAGTACAGGGCAGGTTTCAAGG TTCACCTGCGGTTATTACCTATCGTGTTCCCACAAAGGCTGCGCTTCAGGAGGCCT ATTCAA CCCCCATCCTTGCACTTGATGTTCTTGCTGAGAGGCCTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTT GTGGCGA AGTA CGGGTCGCTGGTGT CCGTT GTTGGCTTGGTTGGAGTGTTT ATCTACCTGGTTGCAAGCCCGTCAAAATCCAGCGGTGCAAAAGCAAGCAAGAAGAGGCCGTTGATATACTTGCCTACCATATATAAGGCA GTGTTTGTTCTTTT TTA TTA AAAAGAGGAAGAGATGGTGGCA ] [+] EMBL OSR06872A [ TTGATCTCT GGAGAGATGTCAAAGA CATTGG AAAGGCTT GACCCTGGTGT CA CTG C TTCG CA TGCATTT GTCTTGGAGACCAAAGTACAGGGCAGGTTTCAAGG TTCACCTGCGGTTATTACCTATCGTGTTCCCACAAAGGCTGCGCTTCAGGAGGCCT ATTCAA CCCCCATCCTTGCACTTGATGTTCTTGCTGAGAGGCCTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTT GTGGCGA AGTA CGGGTCGCTGGTGT CCGTT GTTGGCTTGGTTGGAGTGTTT ATCTACCTGGTTGCAAGCCCGTCAAAATCCAGCGGTGCAAAAGCAAGCAAGAAGAGG CGTTGATATACTTGCCTACCATATATAAGGCA GTGTTTGTTCTTTT T ] [+] EMBL BM037969 [ t TCTCTGGGAGAGATGTCCAAGACCATTGGAAAAGGCTTGGAACCT GTGTCCACCTGTCTTTCGCCAGTGCATTTTGGTCTTGGAGACC AAGTACAGGGCAGGTTTCAAGGTTTCACCT CGGTTATTACCTATCGTGTTCCCACACAAGCTGCGCTTCAGGAGGCCTGATTCAA CCCCCATCCTTGCACTTGATGTTCTT CTGAGAGGCCTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTT GTGGCGA AGTA CGGGTCGCTGGTGT CCGTT GTTGGCTTGGTTGGAGTGTTT ATCTACCTGGTTGCAAGCCCGTCAAAATCCAGCGGTGCAAAAGCAAGCAAGAAGAGG CGTTGATATACTTGCCTACCATATATAAGGCA GTGTTTGTTCTTTT TTA TTA AAAAGAGGAAGAGATGGTGGCA GGTTTT TTTAGATTGATAGCGCGAGAGCTTTAAGGCTG CCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGTGTTTTTGGAAGTTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATGCATCATTTTGAAGTTGCCTGATACAAAA ] [-] EMBL CF291009 [ A CATTGG AAAGGCTT GACCCTGGTGT CA CTG C TTCG CA TGCATTT GTCTTGGAGACCAAAGTACAGGGCAGGTTTCAAGG TTCACCTGCGGTTATTACCTATCGTGTTCCCACAAAGGCTGCGCTTCAGGAGGCCT ATTCAACCCCCCATCCTTGCACTTGATGTTCTTGCTGAGAGGCCTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTT GTGGCGA AGTA CGGGTCGCTGGTGT CCGTT GTTGGCTTGGTTGGAGTGTTT ATCTACCTGGTTGCAAGCCCGTCAAAATCCAGCGGTGCAAAAGCAAGCAAGAAGAGG CGTTGATATACTTGCCTACCATATATAAGGCA GTGTTTGTTCTTTT TTA TTA AAAAGAGGAAGAGATGGTGGCA GG TTT TTTAGATTGATAGCGCGAGAGCTTTAAGGCTG CCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGTGTTTTTGGAAGTTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATGCATCATTTTGAAGTTGCCTGATAAAAAAA ] [+] EMBL AU167002 [ TTCAA CCCCCATCCTTGCACTTGATGTTCTTGCTGAGAGGCCTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTT GTGGCGA AGTA CGGGTCGCTGGTGT CCGTT GTTGGCTTGGTTGGAGTGTTT ATCTACCTGGTTGCAAGCCCGTCAAAATCCAGCGGTGCAAAAGCAAGCAAGAAGAGG CGTTGATATACTTGCCTACCATATATAAGGCA GTGTTTGTTNTTTT TTA TTA AAAAGAGGAAGAGATGGTGGCA GG TTT TTTAGATTGATAGCGCGAGAGCTTTAAGGCTG CCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGTGTTTTTGGAAGTTGAAAACCTAACCCANAGAATTGGAGAGTAGATTTTGTAACAGATGAAATNTCAATGCATCNTTTTGAAGTTGCCTGATNAAAAAAAAAAAAA ] [+] EMBL BI796852 [ AA CCCCCATCCTTGCACTTGATGTTCTTGCTGAGA GCCTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTT GTGGCGA AGTA CGGGTCGCTGGTGT CCGTT GTTGGCTTGGTTGGAGTGTTT ATCTACCTGGTTGCAAGCCCGTCAAAATCCAGCGGTGC AAAGCAAGCAAGAAGAGG CGTTGATATACTTGCCTACCATATATAAGGCACGTGTTTGTTCTTTT TTA TTA AAAAGAGGAAGAGATGGTGGCA GG TTT TTTAGATTGATAGCGCGAGAGCTTTAAGGCTG CCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGTGTTTTTGGAAGTTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTC ATGCATCATTTTGAAGTTGCCTGATACAAAAAAAAAA ] [+] EMBL CF330747 [ GAGGCCTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTT GTGGCGA AGTA CGGGTCGCTGGTGT CCGTT GTTGGCTTGGTTGGAGTGTTT ATCTACCTGGTTGCAAGCCCGTCAAAATCCAGCGGTGCAAAAGCAAGCAAGAAGAGG CGTTGATATACTTGCCTACCATATATAAGGCA GTGTTTGTTCTTTT TTA TTA AAAAGAGGAAGAGATGGTGGCA GG TTT TTTAGATTGATAGCGCGAGAGCTTTAAGGCTG CCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGTGTTTTTGGAAGTTGAAAACCTAACCCAGAGAATTGGAGA ] [+] EMBL AU167003 [ TGGGCTAANAGGCTT GTGGCGA AGTA CGGGTCGCTGGTGT CCGTT GTTGGCTTGGTTGGAGTGTTT ATNTACCTGGTTGCAAGCCCGTCAAAATCCAGCGGTGCAAAAGCAAGCAAGAANAGG CGTTGATATACTTGCCTACCATATATAAGGCA GTGTTTGTTNTTTT TTN TTA AAAANAGGAANAGATGGTGGCA GG TTT TTTAGATTGATAGCGCGAGAGCTTTAAGGCTGCCCGCATCCNTGAACTGTATGAATTTTCTCTGTTTGTGTTTTTGGAAGTTGAAAACCTAACCCANAGAATTGGAGAGTAGATTTTGTAACAGATGAAATNTCAATGCATCNTTTTGAAGTTGCCTGAAAAAAAAAAAAA ] [+] EMBL BI811071 [ AAGAGGCTTGGTGGCGAGAGTACCGGGTCGCTGGTGTCCCGTTGGTTGGCTTGGTTGGAGTGTTTGATCTACCTGGTTGCAAGCCCGTCAAAATCCAGCGGTGCCAAAGCCAGCCAGAAGAGG CGTTGATATACTTGCCTACCATATATAA GCACGTGTTTGTTCTTTTCTTAGTTACAAAAGAGGAAGAGATGGTGGCACGG TTTCTTTAGATTGATAGCGCGAGAGCTTTAAGGCTG CCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGTGTTTTTGGAAGTTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAAaaa ] consensusID : consensus_16895#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 516 fasta sequence [AGCCTCCAGAAAAGAAGTTGAATGGGGCTAAGAGCTTGTGGCGAAGTACGGGTCCTGGTGTCCCTTGTTGCTTGGTTGGAGTGTTGATCTACCTGGTTGCAAGCCCTGTCAAATCCAGCGGTGCAAAAAGCAAGCAAGAAGAGGCTTTGATATACTTGCCTACCATATATAAGCATGTTTGTTCTTTTTTATTAAAAAGAGGAAGAGATGGTGCACGGTTTTTTAGATTGATAGCGCGAGAGCTTTAAGGCTGCCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGTGTTTTTGGAAGTTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATGCATCATTTTGAAGTTGCCTGATACAGATACCTATTCATTGCATTTGGTAACCAA--AAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL BI794987 [AGCCTCCAGAAAAGAAGTTGAATGGGGCTAAGAGCTTGTGGCGAAGTACGGGTCCTGGTGTCCCTTGTTGCTTGGTTGGAGTGTTGATCTACCTGGTTGCAAGCCCTGTCAAATCCAGCGGTGCAAAAAGCAAGCAAGAAGAGGCTTTGATATACTTGCCTACCATATATAAGCATGTTTGTTCTTTTTTATTAAAAAGAGGAAGAGATGGTGCACGGTTTTTTAGATTGATAGCGCGAGAGCTTTAAGGCTGCCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGTGTTTTTGGAAGTTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATGCATCATTTTGAAGTTGCCTGATACAGATACCTATTCATTGCATTTGGTAACCAA AAAAAAAA ] [+] EMBL CF309061 [ AGATGAAATCTCAATGCATCATTTTGAAGTTGCCTGATACAGATACCTATTCATTGCATTTGGTAACAGATGAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_16895#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 340 fasta sequence [CAAGGGTCCTTTTTGGAAAAAAAAAAAAAAAAAAAAAAAAAAATTGATATACTTGCCTACCATATATAAGGCAGTGTTTGTTCTTTTTTATTAAAAAGAGGAAGAGATGGTGGCAGGTTTTTTAGATTGATAGCGCGAGAGCTTTAAGGCTGCCGCATCCTTGAACTGTATGAATTTTCTCTGAAAGAGTTTTTGGAAGTTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATGCATCATTTTGAAGTTGCCTGATACAGATACCTATTCATTGCATTTGGTAACAGATGAAATCTCAATGCATCATTTTGAAAAAA] [-] EMBL CF308587 [CAAGGGTCCTTTTTGGAAAAAAAAAAAAAAAAAAAAAAAAAAATTGATATACTTGCCTACCATATATAAGGCAGTGTTTGTTCTTTTTTATTAAAAAGAGGAAGAGATGGTGGCAGGTTTTTTAGATTGATAGCGCGAGAGCTTTAAGGCTGCCGCATCCTTGAACTGTATGAATTTTCTCTGAAAGAGTTTTTGGAAGTTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATGCATCATTTTGAAGTTGCCTGATACAGATACCTATTCATTGCATTTGGTAACAGATGAAATCTCAATGCATCATTTTGAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_16895#1 ------------------------------------------------------------ consensus_16895#3 ------------------------------------------------------------ consensus_16895#2 ------------------------------------------------------------ consensus_16895#4 ------------------------------------------------------------ consensus_16895#5 ------------------------------------------------------------ consensus_16895#0 AGGAGTAGGGCATCCAGAATCAGATCCACAAGGCAGCAGCTGCAGCAGCATCGACCATGG 60 consensus_16895#1 ------------------------------------------------------------ consensus_16895#3 ------------------------------------------------------------ consensus_16895#2 ------------------------------------------------------------ consensus_16895#4 ------------------------------------------------------------ consensus_16895#5 ------------------------------------------------------------ consensus_16895#0 CGATGGCGCGATCCATCCTCCTCCTCCTCCTCCTCGCCGCCGCCGCCTCCGCCTCCGCCG 120 consensus_16895#1 ------------------------------------------------------------ consensus_16895#3 ------------------------------------------------------------ consensus_16895#2 ------------------------------------------------------------ consensus_16895#4 ------------------------------------------------------------ consensus_16895#5 ------------------------------------------------------------ consensus_16895#0 ACGCGCCCTTCCTCGTCGCGCACAAGAAGGTTTCGCTCTCCCGCCCCAAGCCTGGCGTCG 180 consensus_16895#1 ------------CAGCATCGACCATGGCGATGGCGCGATCCATCCTCCTCCTCCTCCTCC 48 consensus_16895#3 ----CTTGCCGTCTCCCTCGACCTCTACAACCAGG-GATCCGCAACTGCCTATGATGTGA 55 consensus_16895#2 --------------------ACTGCCGGTAAAATTTATTGCAGAACTGCCTATGATGTGA 40 consensus_16895#4 ------------------------------------------------------------ consensus_16895#5 ------------------------------------------------------------ consensus_16895#0 AGCGCCTCGCCGTCTCCCTCGACCTCTACAACCAGGGATCCGCAACTGCCTATGATGTGA 240 consensus_16895#1 TCGCCGCCGCCGCCTCCGCCTCCGCCGACGCGCCCTTCCTCGTCGCGCACAAGATGTCAA 108 consensus_16895#3 GCATTAATGATGATACTGGGCCAAAGGAGGCATNTGAGCTTGTCTCTGGAGAGATGTCAA 115 consensus_16895#2 GCATTAATGATGATACTTGGCCAAAGGAGGCATTTGAGTTTGTTTTTGGAGAGATGTCAA 100 consensus_16895#4 ------------------------------------------------------------ consensus_16895#5 ------------------------------------------------------------ consensus_16895#0 GCATTAATGATGATACTTGGCCAAAGGAGGCATTTGAGCTTGTCTCTGGAGAGATGTCAA 300 consensus_16895#1 AGACATTGGAAAGGCTTGACCCTGGTGTCACTGCTTCGCATGCATTTGTCTTGGAGACCA 168 consensus_16895#3 AGACATTGGAAAGGCTTGACCCTGGTGTCACTGCTTCGCATGCATTTGTCTTGGAGACCA 175 consensus_16895#2 AGACATTGGAAAGGCTTGACCCTGGTGTCACTGTTTGGCATGCATTTGTCTTGGAGACCA 160 consensus_16895#4 ------------------------------------------------------------ consensus_16895#5 ------------------------------------------------------------ consensus_16895#0 AGACATTGGAAAGGCTTGACCCTGGTGTCACTGCTTCGCATGCATTTGTCTTGGAGACCA 360 consensus_16895#1 AAGTACAGGGCAGGTTTCAAGGTTCACCTGCGGTTATTACCTATCGTGTTCCCACAAAGG 228 consensus_16895#3 AAGTACAGGGCAGGTTTCAAGGTTCACCTGCGGTTATTACCTATCGTGTTCCCACAAAGG 235 consensus_16895#2 AAGTACAGGGCAGGTTTCAAGGTTCACCTGCGGTTATTACTTATAGTGTTCCCACAAAGG 220 consensus_16895#4 ------------------------------------------------------------ consensus_16895#5 ------------------------------------------------------------ consensus_16895#0 AAGTACAGGGCAGGTTTCAAGGTTCACCTGCGGTTATTACCTATCGTGTTCCCACAAAGG 420 consensus_16895#1 CTGCGCTTCAGGAGGCCTATTCAACCCCCATCCTTGCACTTGATGTTCTTGCTGAGAGGC 288 consensus_16895#3 CTGCGCTTCAGGAGGCCTATTCAACCCCCATCCTTGCACTTGATGTTCTTGCTGAGAGGC 295 consensus_16895#2 GTGCGCTTCAGGAGGCGTATTCAACCCCCATCCTTGCAATTGATGTTTTTGTTGAGAGGC 280 consensus_16895#4 ---------------------------------------------------------AGC 3 consensus_16895#5 ------------------------------------------------------------ consensus_16895#0 CTGCGCTTCAGGAGGCCTATTCAACCCCCATCCTTGCACTTGATGTTCTTGCTGAGAGGC 480 consensus_16895#1 CTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTTGTGGCGAAGTACGGGTCGCTGGTGT 348 consensus_16895#3 CTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTTGTGGCGAAGTACGGGTCGCTGGTGT 355 consensus_16895#2 CTCCAGAAAAGAAGTTTGAATGGGTTAAGAGGTTTGTGGCGAAGTACGGGTCGCTGGTGT 340 consensus_16895#4 CTCCAGAAAAGAAGTTGAATGGGGCTAAGAG-CTTGTGGCGAAGTACGGGTC-CTGGTGT 61 consensus_16895#5 ------------------------------------------------------------ consensus_16895#0 CTCCAGAAAAGAAGTTTGAATGGGCTAAGAGGCTTGTGGCGAAGTACGGGTCGCTGGTGT 540 consensus_16895#1 CCGTTGTTGGCTTGGTTGGAGTGTTTATCTACCTGGTTGCAAGCCCGTCAAAATCCAGCG 408 consensus_16895#3 CCGTTGTTGGCTTGGTTGGAGTGTTTATCTACCTGGTTGCAAGCCCGTCAAAATCCAGCG 415 consensus_16895#2 CCGTTTTTGGTTTGGTTGGAGTGTTTATTTACCTGGTTGCAAGCCCGTCAAAATCCAGCG 400 consensus_16895#4 CCCTTGTTG-CTTGGTTGGAGTGTTGATCTACCTGGTTGCAAGCCCTGTCAAATCCAGCG 120 consensus_16895#5 ---------------------------------------CAAGGGTCCT----TTTTGGA 17 consensus_16895#0 CCGTTGTTGGCTTGGTTGGAGTGTTTATCTACCTGGTTGCAAGCCCGTCAAAATCCAGCG 600 **** * * consensus_16895#1 GTGCAAAA-GCAAGCAAGAAGAGGCGTTGATATACTTGCCTACCATATATAAGGCAGTGT 467 consensus_16895#3 GTGCAAAA-GCAAGCAAGAAGAGGCGTTGATATACTTGCCTACCATATATAAGGCAGTGT 474 consensus_16895#2 GTGCAAAA-GCAAGCAAGAAGAGGGGTTGATATACTTGCCTACCATATATAAGGCAGGGT 459 consensus_16895#4 GTGCAAAAAGCAAGCAAGAAGAGGCTTTGATATACTTGCCTACCATATATAAGC--ATGT 178 consensus_16895#5 AAAAAAAAAAAAAAAAAAAAAAAAAATTGATATACTTGCCTACCATATATAAGGCAGTGT 77 consensus_16895#0 GTGCAAAA-GCAAGCAAGAAGAGGCGTTGATATACTTGCCTACCATATATAAGGCAGTGT 659 **** ** ** ** * *************************** ** consensus_16895#1 TTGTTCTTTTTTATTAAAAAGAGGAAGAGATGGTGGCAGGTTTTTTAGATTGATAGCGCG 527 consensus_16895#3 TTGTTCTTTTTTATTAAAAAGAGGAAGAGATGGTGGCAGGTTTTTTAGATTGATAGCGCG 534 consensus_16895#2 TTGTTTTTTTTTATTAAAAAGAGGAAGAGATGGTGGCAGGTTTTTTAGATTGATAGCGGG 519 consensus_16895#4 TTGTTCTTTTTTATTAAAAAGAGGAAGAGATGGTGCACGGTTTTTTAGATTGATAGCGCG 238 consensus_16895#5 TTGTTCTTTTTTATTAAAAAGAGGAAGAGATGGTGGCAGGTTTTTTAGATTGATAGCGCG 137 consensus_16895#0 TTGTTCTTTTTTATTAAAAAGAGGAAGAGATGGTGGCAGGTTTTTTAGATTGATAGCGCG 719 ***** ***************************** ******************** * consensus_16895#1 AGAGCTTTAAGGCTGCCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGGGTTTTTGAA 587 consensus_16895#3 AGAGCTTTAAGGCTGCCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGTGTTTTTGGA 594 consensus_16895#2 AGAGTTTTAAGGCTGCCGCATCCTTGAACTGTATGAATTTTTTTTGTTTGTGTTTTTGGA 579 consensus_16895#4 AGAGCTTTAAGGCTGCCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGTGTTTTTGGA 298 consensus_16895#5 AGAGCTTTAAGGCTGCCGCATCCTTGAACTGTATGAATTTTCTCTGAAAGAGTTTTTGGA 197 consensus_16895#0 AGAGCTTTAAGGCTGCCGCATCCTTGAACTGTATGAATTTTCTCTGTTTGTGTTTTTGGA 779 **** ************************************ * ** * ******* * consensus_16895#1 AGTTGAAACCT--ACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATG 645 consensus_16895#3 AGTTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATG 654 consensus_16895#2 AGTTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATTTCAATG 639 consensus_16895#4 AGTTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATG 358 consensus_16895#5 AGTTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATG 257 consensus_16895#0 AGTTGAAAACCTAACCCAGAGAATTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATG 839 ******** * **************************************** ****** consensus_16895#1 CATCATTTTGAAATTGCCTGGAAANAAAAAAAAACAGCAGAGTATCTCCGCGCAAAATAT 705 consensus_16895#3 CATCATTTTGAAGTTGCCTGATACAAAAAAAAAAAAAA---------------------- 692 consensus_16895#2 CATCATTTTGAAGTGGCCTGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAAA 699 consensus_16895#4 CATCATTTTGAAGTTGCCTGATACAGATACCTATTCATTGCATTTGGTAACCAAAAAAAA 418 consensus_16895#5 CATCATTTTGAAGTTGCCTGATACAGATACCTATTCATTGCATTTGGTAACAGATGAAAT 317 consensus_16895#0 CATCATTTTGAAGTTGCCTGATACAGATACCTATTCATTGCATTTGGTAACAGATGAAAT 899 ************ * ***** * * * * consensus_16895#1 ATAAAGATNTAAGTATGGAGGGACGCGCGGCAGGGAAAATACAACGTGGAGAAAGCTGAT 765 consensus_16895#3 ------------------------------------------------------------ consensus_16895#2 AAAAAAAAAAAAAAA--------------------------------------------- 714 consensus_16895#4 AAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 478 consensus_16895#5 CTCAATGCATCATTTTGAAAAAA------------------------------------- 340 consensus_16895#0 CTCAATGCATCATTTTGAAGTTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 959 consensus_16895#1 TTAGTACGCGCTCGCAGGCGTTCTATGAATGGATGATAATTCCGGGGGGGGGAGGCGGGG 825 consensus_16895#3 ------------------------------------------------------------ consensus_16895#2 ------------------------------------------------------------ consensus_16895#4 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---------------------- 516 consensus_16895#5 ------------------------------------------------------------ consensus_16895#0 AAAAAAAAAAAAAA---------------------------------------------- 973 consensus_16895#1 GGANACANCCGGCCTATATTGGAGGGGG 853 consensus_16895#3 ---------------------------- consensus_16895#2 ---------------------------- consensus_16895#4 ---------------------------- consensus_16895#5 ---------------------------- consensus_16895#0 ---------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||