cluster # 1715

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Oryza sativa
cluster # 1715 cluster # 1715 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1715#0 length = 918 sequences # 2

consensusID : consensus_1715#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 918
fasta sequence

                              [CNGGCGGCATGAACCACCACCGCCACCACACAACCGCCGGCCACGCCCACCACCGCGCTGTCAGGAATTCAGAGGAGTCTGGAGCAATGAGATCTTCAGCGCANAGCATCAGATGAACGGGATCCGGGCAGTCGCCTCACCTGAAAGAGAACGCCCTGCAAGGGCAGCAACATCATCAACAACAATGGAGGTCCGCCGACCTCCCCAGATGACAAGAAGGGTTCGTCGTCAGGGAGCGAGGGGTCGATCTGGCCCAAATTTGCAGTCGCCCTGACGAACAAAGAGAAAGAAGAGGACTTCTGGGTGTTCAAAGGATCCAAGCTTCCTCAGAGGCCCAAGAAGAGAGCCAAAGTCATCCAGAGGACAGTGAATCTTGTATGCCCTGGAACATGGCTTTGCGACTTGACACTGGAAAGATACGAAGTCCGAGAGAAGAAGGTTTCTAAAAAGCGCCCCAGGGGGTTGAAAGCAATGCACAACATGGACAGCGACTCTGAATAATAGGAT-CACTGAACACGAA-TAGCTGAACATTAGAAAGGNGATAATTGCGCATACCCATTTAGCTGAAGATTTTTCAGCTTTCTGATGGAACAATCACGGGCTCCCCGCTTCTCGCGCTTAATTTGAGGAGATCAAGATGACTGGACTGTCGTAATTTGGAAGCTGCACAGAAGAACACAGAGGCTGCAGGAAATATGTTTGCTCTGAACACTGTCTGCTGTCTGCCTACCAGCAACGCGGCTCTGAATGTTTTCCAAGTTTCTCATGTATACGTCTTGCTACCTAAAATGTGAAGCACACTGCTCAGGCCAGTCCAGTTTGATCGATGTGTAGCTTGCCCTGTGCATGACAATNGCAGTTAACACGAATCTGATAGTCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU029259             [CNGGCGGCATGAACCACCACCGCCACCACACAACCGCCGGCCACGCCCACCACCGCGCTGTCAGGAATTCAGAGGAGTCTGGAGCAATGAGATCTTCAGCGCANAGCATCAGATGAACGGGATCCGGGCAGTCGCCTCACCTGAAAGAGAACGCCCTGCAAGGGCAGCAACATCATCAACAACAATGGAGGTCCGCCGACCTCCCCAGATGACAAGAAGGGTTCGTCGTCAGGGAGCGAGGGGTCGATCTGGCCCAAATTTGCAGTCGCCCTGACGAACAAAGAGAAAGAAGAGGACTTCTGGGTGTTCAAAGGATCCAAGCTTCCTCAGAGGCCCAAGAAGAGAGCCAAAGTCATCCAGAGGACAGTGAATCTTGTATGCCCTGGAACATGGCTTTGCGACTTGACACTGGAAAGATACGAAGTCCGAGAGAAGAAGGTTTCTAAAAAGCGCCCCAGGGGGTTGAAAGCAATGCACAACATGGACAGCGACTCTGAATAATAGGAT CACTGAACACGAA TAGCTGAACATTAGAAAGGNGATAATTGCGCATACCCATTTAGCTGAAGATTTTTCAGCTTTCTGATGGAACAATCACGGGCTCCCCGCTTCTCGCGCTTAATTTGAGGAGATCAAGATGACTGGACTGTCGTAATTTGGAAGCTGCACAGAAGAACACAGAGGCTGCAGGAAATATGTTTGCTCTG                                                                                                                                                                                                                   ]
[+] EMBL AU029258             [                                                                                                                                                                                                                                                                                                                                                                                                     nTGGCTTTGCGACTTGACACTGGAAAGATACGAAGTCCNAGAGAAGAAGGTTTCTAAAAAGCGCCCCAGGGGGTTGAAAGCAATGCACAACATGGACAGCGACTCTGAATAATAGGATCCACTGAACNCGAAGTAGCTGAACATTAGAAAGGAGATAATTGCGCATACCCATTTAGCTGAAGATTTTTCAGCTTTCTGATGGAACAATNACGGGNTCCCCGCTTNTCGCGCTTAATTTGAGGAGATCAAGATGACTGGACTGTCGTAATTTGGAAGCTGCACAGAAGAACACAGAGGCTGCAGGAAATATGTTTGCTCTGAACACTGTCTGCTGTCTGCCTACCAGCAACGCGGCTCTGAATGTTTTCCAAGTTTCTCATGTATACGTCTTGCTACCTAAAATGTGAAGCACACTGCTCAGGCCAGTCCAGTTTGATCGATGTGTAGCTTGCCCTGTGCATGACAATNGCAGTTAACACGAATCTGATAGTCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_1715#0
CNGGCGGCATGAACCACCACCGCCACCACACAACCGCCGGCCACGCCCACCACCGCGCTG
TCAGGAATTCAGAGGAGTCTGGAGCAATGAGATCTTCAGCGCANAGCATCAGATGAACGG
GATCCGGGCAGTCGCCTCACCTGAAAGAGAACGCCCTGCAAGGGCAGCAACATCATCAAC
AACAATGGAGGTCCGCCGACCTCCCCAGATGACAAGAAGGGTTCGTCGTCAGGGAGCGAG
GGGTCGATCTGGCCCAAATTTGCAGTCGCCCTGACGAACAAAGAGAAAGAAGAGGACTTC
TGGGTGTTCAAAGGATCCAAGCTTCCTCAGAGGCCCAAGAAGAGAGCCAAAGTCATCCAG
AGGACAGTGAATCTTGTATGCCCTGGAACATGGCTTTGCGACTTGACACTGGAAAGATAC
GAAGTCCGAGAGAAGAAGGTTTCTAAAAAGCGCCCCAGGGGGTTGAAAGCAATGCACAAC
ATGGACAGCGACTCTGAATAATAGGATCACTGAACACGAATAGCTGAACATTAGAAAGGN
GATAATTGCGCATACCCATTTAGCTGAAGATTTTTCAGCTTTCTGATGGAACAATCACGG
GCTCCCCGCTTCTCGCGCTTAATTTGAGGAGATCAAGATGACTGGACTGTCGTAATTTGG
AAGCTGCACAGAAGAACACAGAGGCTGCAGGAAATATGTTTGCTCTGAACACTGTCTGCT
GTCTGCCTACCAGCAACGCGGCTCTGAATGTTTTCCAAGTTTCTCATGTATACGTCTTGC
TACCTAAAATGTGAAGCACACTGCTCAGGCCAGTCCAGTTTGATCGATGTGTAGCTTGCC
CTGTGCATGACAATNGCAGTTAACACGAATCTGATAGTCTTCAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case