cluster # 1766

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Oryza sativa
cluster # 1766 cluster # 1766 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1766#0 length = 558 sequences # 2

consensusID : consensus_1766#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 558
fasta sequence

                              [GGGNGGANTCAGNAAAATCATTNGACNCTTTTTCTCCNGATTCAAAATAGGGGGGGATCGTGGTGNGCGGCAGATGTGTGATGAAGAAGANTGAACATTGAGGATCAGTGGGTACCGATGGGGATGGNGGAGTTCACATTCCTTNTGACAGTCCCGGAGCTGGCTGTGCTGAGAATTNGAGNTTCATGAGTACGACATGTCGGAGAAGCATGACTTTGGGGGGCAGACATGCCTGCCAGTGTCGGAGCTGAAGCAGGGCATCCGCGCTGTGCCTCTCCACGATCGCCGGGGCACCAGGNACAAGTCTGTCAGGCTCCTC-ATGCGCTTCGACTTCCTCTAGCTAGCTTTCTACCTAGCTAGTGCTGCTGCCAAAACCAGAATACCAGATGATGTATCTTACTAGTTTTCTAGGCTTCTTCAGCTGGTGCATATATGTACTATGGATGTAGATGTACTATTTTTGTAATCACACATGCATCTTGCATGTCTTGATAATGATAATAATGCTAGCATGGTTGGTAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AA753637             [GGGNGGANTCAGNAAAATCATTNGACNCTTTTTCTCCNGATTCAAAATAGGGGGGGATCGTGGTGNGCGGCAGATGTGTGATGAAGAAGANTGAACATTGAGGATCAGTGGGTACCGATGGGGATGGNGGAGTTCACATTCCTTNTGACAGTCCCGGAGCTGGCTGTGCTGAGAATTNGAGNTTCATGAGTACGACATGTCGGAGAAGCATGACTTTGGGGGGCAGACATGCCTGCCAGTGTCGGAGCTGAAGCAGGGCATCCGCGCTGTGCCTCTCCACGATCGCCGGGGCACCAGGNACAAGTCTGTCAGGCTCCTC ATGCGCTTCGACTTCCTCTAGCTAGCTTTCTACCTAGCTAGTGCTGCTGCCAAAACCAGAATACCAGATGATGTATCTTACTAGTTTTCTAGGCTTCTTCAGCTGGTGCATATATGTACTATGGATGTAGATGTACTATTTTTGTAATCACACATGCATCTTGCATGTCTTGATAATGATAATAATGCTAGCATGGTTGGTAGGAAAAAAAAAAA                        ]
[+] EMBL AU094364             [                                                                                                                                                                                                                                                                                                                          nCCTCNATGCGCTTCGACTTCCTCTAGNTAGCTTTCTACCTAGCTAGTGCTGCTNCCAAAACCNGAATACCAGATGATGTATCTTACTAGTTTTCTAGGCTTCTTCAGCTGGTGCATATATGTACTATGGATGTAGATGTACTATTTTTGTAATCACACATGCATCTTGCATGTCTTGATAATGATAATAATGCTAGCATGGTTGGTNGGNATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_1766#0
GGGNGGANTCAGNAAAATCATTNGACNCTTTTTCTCCNGATTCAAAATAGGGGGGGATCG
TGGTGNGCGGCAGATGTGTGATGAAGAAGANTGAACATTGAGGATCAGTGGGTACCGATG
GGGATGGNGGAGTTCACATTCCTTNTGACAGTCCCGGAGCTGGCTGTGCTGAGAATTNGA
GNTTCATGAGTACGACATGTCGGAGAAGCATGACTTTGGGGGGCAGACATGCCTGCCAGT
GTCGGAGCTGAAGCAGGGCATCCGCGCTGTGCCTCTCCACGATCGCCGGGGCACCAGGNA
CAAGTCTGTCAGGCTCCTCATGCGCTTCGACTTCCTCTAGCTAGCTTTCTACCTAGCTAG
TGCTGCTGCCAAAACCAGAATACCAGATGATGTATCTTACTAGTTTTCTAGGCTTCTTCA
GCTGGTGCATATATGTACTATGGATGTAGATGTACTATTTTTGTAATCACACATGCATCT
TGCATGTCTTGATAATGATAATAATGCTAGCATGGTTGGTAGGAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case