cluster # 1780

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Oryza sativa
cluster # 1780 cluster # 1780 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1780#0 length = 2233 sequences # 2
consensusID : consensus_1780#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2233
fasta sequence
                              [GCGACGTGACGGTGGTGCTGTACGGCAAGGAAGGGATCGCGGTGAGGATGAGCGTGCACGGGGACGTGCTCCGCCGGAGCAGCGCCTTCTTCGCCGAGAAGCTCTCCTCCTCCTCCTCCTCCTCCGGCTCCGGTGGCCATGGCCATGGCTCGTGCCTGGAGATCCATGACTGCGACGACGCTGAGATCTATGTGGAAACCGTCGGGCTCATGTACTGCGACGAGGCCAAGCACAAGCTGCTCAAGCAGAATGTCTCGCGTGTTCTTCGCATCATGAAGGTTGCCGAGTCGCTTGGTTTCCACGCATGTGTCAAGTCATGCTTGGATTATTTGGAAGCTGTTCCTTGGGTTGGTGAGGAAGAAGACAATGTTGTGTCCTCGATACGGCATCTTCAGAGCAAGGCTTATGGAGTTAGTCCTCTGCTGAAAAGAATTACTTCTGACAATCTAAAATCACCAACTGATACATTAGCTCTTATAATGGAGATGGTGTTGAAGAGCACTGATGACAGGGCGCGTCGGGAAATGAAAGCCCTTGTTCTGAATCTTCTG-AAGACAGCAACCATTGCACAGATGGATCATCAGACATCAGTTCAGAATTATTGTACAGTTCATGCCAAGGTTGCTTAGACAGACTTCGACTACTGTTTTCAGAAGCGACGGGACAAGAATTTTCTGTTGAACTTACACGGCAAATAACTCTGGAGACAGATAATCTCCTCTGGTTGGTTGAGATATTGGTTAACCAGCGCATCTGCGATGATTTTGTGGCTCTATGGGCAAACCAAAGCAAGATTGCAGAATTACATGGAAAATTGCCGGTTGCCTCTCGTCACACTGTTAGCTGTATCACAGCAAGGCTTTTTGTCGGAATTGGAAGAGGAGAGATGCTTCCATCCAAGAACACCCGTCTCCTCCTCTTGCAAGTCTGGCTGCAACCACTCATTGATGACTACTCATGGTTACAATGCAGCTGCCGGTCATTCGATAGGAAGCTCGTCGAGGAAGGGATCGGGCAGACAATCCTGACACTTCCCTTGGAAGATCAGCGGTCCATGTTACTGGCATGGCTTGGGAGATTCTTGAAGTTAGGGGATAATTGCCCTAATCTCCAGAGGGCATTTGAAGTATGGTGGAGAAGGACTTTTGTCAGGCCTTATGTCAGTCAGGCAAGGTAATGTTTTATGATCAGACAGAAGTTCATCTTGAAAAGACAAGCGGACCTTTTGCGTGTTCGGTGTTCCCCCAAAAAATTCATCTTGAAAATATAGGGAAGAGTAGTGCATTTAGCTTATCGTAGATTCTTTGGGAGATTGTCTTGGTCAATCTGATGATGGACATGAGGTCAGATTAGAGTTATCATGCAAAGTGCACCAGAGATTTGTATAAGAGTGCATGCTTAGCTTGCATGTAAAATCTTGATCGGTAATCGTTATGCCAAAACTTTTACACAGTATTTCTTTGAAGTAATGATTTGGCTTTGCTACTCTCTACCTTGATTTTGGACAGATGTGGTGGATAAACTTGCAGTTGGATGTTGTTGGGCATGATTAGGGGGAAAGTAAAGAGCTCGGTGTGCATCAGCTTCAGTGGGATGCCAATGGTGATTTTTTTGGTCTTGATGTTAGTGGAAGCTCCACCTTACAGAATGAATTGAAAAGGCAAAGCTGCTATCATCTTTTGTCAAGCGTCTCCATCGATGACTCATGAGGTATGCCTTGATCAGATTGTTCAGCTCAGGGAAGTTGAGGTAAGTAAGAATTTCCCGGCATGTTCAGGATCTTGTTCATCCAAAAGATGTGCTACATACCAAATTCGCAGCATTATAGTGTGGGTTGTAACTCAGTACTTCAGTCCCAACATGATGAAAGCTTTGCTGTCAAGATGGAATCTGATTCAGTAAAAATCTTCAGTGGTGAGCATCTGGAGAAAGAAAAGCATGTGCCTTACCAGGGGGAGATTACCATCTTGAATAAGCTGAAAAGGGTCAAAATTCAGCTGAGTGATCCCTTTGTCAGAAGGATGGTTGAGAAAAATGTAAACAACTTTTCATTATCTTAAGAAGAAGTTAAATAATGTGACTCCTAAGTTGGTGACTCCTAAGTTGTGAGTACCTAACATGAGCTGTCCACATGATGTGTCTTAAGAGTTGAGATTCCGGCAAAAGAATTGCTTTGATGTGTGCCTTCACCTAAACATATTGTGGGCTCAATAACAAATTAGATTACTTGGGC]

[+] EMBL CB639656             [GCGACGTGACGGTGGTGCTGTACGGCAAGGAAGGGATCGCGGTGAGGATGAGCGTGCACGGGGACGTGCTCCGCCGGAGCAGCGCCTTCTTCGCCGAGAAGCTCTCCTCCTCCTCCTCCTCCTCCGGCTCCGGTGGCCATGGCCATGGCTCGTGCCTGGAGATCCATGACTGCGACGACGCTGAGATCTATGTGGAAACCGTCGGGCTCATGTACTGCGACGAGGCCAAGCACAAGCTGCTCAAGCAGAATGTCTCGCGTGTTCTTCGCATCATGAAGGTTGCCGAGTCGCTTGGTTTCCACGCATGTGTCAAGTCATGCTTGGATTATTTGGAAGCTGTTCCTTGGGTTGGTGAGGAAGAAGACAATGTTGTGTCCTCGATACGGCATCTTCAGAGCAAGGCTTATGGAGTTAGTCCTCTGCTGAAAAGAATTACTTCTGACAATCTAAAATCACCAACTGATACATTAGCTCTTATAATGGAGATGGTGTTGAAGAGCACTGATGACAGGGCGCGTCGGGAAATGAAAGCCCTTGTTCTGAATCTTCTG AAGACAGCAACCATTGCACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK064196             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GATGGTGTTGAAGAGCACTGATGACAGGGCGCGTCGGGAAATGAAAGCCCTTGTTCTGAATCTTCTGAAAGACAGCAACCATTGCACAGATGGATCATCAGACATCAGTTCAGAATTATTGTACAGTTCATGCCAAGGTTGCTTAGACAGACTTCGACTACTGTTTTCAGAAGCGACGGGACAAGAATTTTCTGTTGAACTTACACGGCAAATAACTCTGGAGACAGATAATCTCCTCTGGTTGGTTGAGATATTGGTTAACCAGCGCATCTGCGATGATTTTGTGGCTCTATGGGCAAACCAAAGCAAGATTGCAGAATTACATGGAAAATTGCCGGTTGCCTCTCGTCACACTGTTAGCTGTATCACAGCAAGGCTTTTTGTCGGAATTGGAAGAGGAGAGATGCTTCCATCCAAGAACACCCGTCTCCTCCTCTTGCAAGTCTGGCTGCAACCACTCATTGATGACTACTCATGGTTACAATGCAGCTGCCGGTCATTCGATAGGAAGCTCGTCGAGGAAGGGATCGGGCAGACAATCCTGACACTTCCCTTGGAAGATCAGCGGTCCATGTTACTGGCATGGCTTGGGAGATTCTTGAAGTTAGGGGATAATTGCCCTAATCTCCAGAGGGCATTTGAAGTATGGTGGAGAAGGACTTTTGTCAGGCCTTATGTCAGTCAGGCAAGGTAATGTTTTATGATCAGACAGAAGTTCATCTTGAAAAGACAAGCGGACCTTTTGCGTGTTCGGTGTTCCCCCAAAAAATTCATCTTGAAAATATAGGGAAGAGTAGTGCATTTAGCTTATCGTAGATTCTTTGGGAGATTGTCTTGGTCAATCTGATGATGGACATGAGGTCAGATTAGAGTTATCATGCAAAGTGCACCAGAGATTTGTATAAGAGTGCATGCTTAGCTTGCATGTAAAATCTTGATCGGTAATCGTTATGCCAAAACTTTTACACAGTATTTCTTTGAAGTAATGATTTGGCTTTGCTACTCTCTACCTTGATTTTGGACAGATGTGGTGGATAAACTTGCAGTTGGATGTTGTTGGGCATGATTAGGGGGAAAGTAAAGAGCTCGGTGTGCATCAGCTTCAGTGGGATGCCAATGGTGATTTTTTTGGTCTTGATGTTAGTGGAAGCTCCACCTTACAGAATGAATTGAAAAGGCAAAGCTGCTATCATCTTTTGTCAAGCGTCTCCATCGATGACTCATGAGGTATGCCTTGATCAGATTGTTCAGCTCAGGGAAGTTGAGGTAAGTAAGAATTTCCCGGCATGTTCAGGATCTTGTTCATCCAAAAGATGTGCTACATACCAAATTCGCAGCATTATAGTGTGGGTTGTAACTCAGTACTTCAGTCCCAACATGATGAAAGCTTTGCTGTCAAGATGGAATCTGATTCAGTAAAAATCTTCAGTGGTGAGCATCTGGAGAAAGAAAAGCATGTGCCTTACCAGGGGGAGATTACCATCTTGAATAAGCTGAAAAGGGTCAAAATTCAGCTGAGTGATCCCTTTGTCAGAAGGATGGTTGAGAAAAATGTAAACAACTTTTCATTATCTTAAGAAGAAGTTAAATAATGTGACTCCTAAGTTGGTGACTCCTAAGTTGTGAGTACCTAACATGAGCTGTCCACATGATGTGTCTTAAGAGTTGAGATTCCGGCAAAAGAATTGCTTTGATGTGTGCCTTCACCTAAACATATTGTGGGCTCAATAACAAATTAGATTACTTGGGC]




>consensus_1780#0
GCGACGTGACGGTGGTGCTGTACGGCAAGGAAGGGATCGCGGTGAGGATGAGCGTGCACG
GGGACGTGCTCCGCCGGAGCAGCGCCTTCTTCGCCGAGAAGCTCTCCTCCTCCTCCTCCT
CCTCCGGCTCCGGTGGCCATGGCCATGGCTCGTGCCTGGAGATCCATGACTGCGACGACG
CTGAGATCTATGTGGAAACCGTCGGGCTCATGTACTGCGACGAGGCCAAGCACAAGCTGC
TCAAGCAGAATGTCTCGCGTGTTCTTCGCATCATGAAGGTTGCCGAGTCGCTTGGTTTCC
ACGCATGTGTCAAGTCATGCTTGGATTATTTGGAAGCTGTTCCTTGGGTTGGTGAGGAAG
AAGACAATGTTGTGTCCTCGATACGGCATCTTCAGAGCAAGGCTTATGGAGTTAGTCCTC
TGCTGAAAAGAATTACTTCTGACAATCTAAAATCACCAACTGATACATTAGCTCTTATAA
TGGAGATGGTGTTGAAGAGCACTGATGACAGGGCGCGTCGGGAAATGAAAGCCCTTGTTC
TGAATCTTCTGAAGACAGCAACCATTGCACAGATGGATCATCAGACATCAGTTCAGAATT
ATTGTACAGTTCATGCCAAGGTTGCTTAGACAGACTTCGACTACTGTTTTCAGAAGCGAC
GGGACAAGAATTTTCTGTTGAACTTACACGGCAAATAACTCTGGAGACAGATAATCTCCT
CTGGTTGGTTGAGATATTGGTTAACCAGCGCATCTGCGATGATTTTGTGGCTCTATGGGC
AAACCAAAGCAAGATTGCAGAATTACATGGAAAATTGCCGGTTGCCTCTCGTCACACTGT
TAGCTGTATCACAGCAAGGCTTTTTGTCGGAATTGGAAGAGGAGAGATGCTTCCATCCAA
GAACACCCGTCTCCTCCTCTTGCAAGTCTGGCTGCAACCACTCATTGATGACTACTCATG
GTTACAATGCAGCTGCCGGTCATTCGATAGGAAGCTCGTCGAGGAAGGGATCGGGCAGAC
AATCCTGACACTTCCCTTGGAAGATCAGCGGTCCATGTTACTGGCATGGCTTGGGAGATT
CTTGAAGTTAGGGGATAATTGCCCTAATCTCCAGAGGGCATTTGAAGTATGGTGGAGAAG
GACTTTTGTCAGGCCTTATGTCAGTCAGGCAAGGTAATGTTTTATGATCAGACAGAAGTT
CATCTTGAAAAGACAAGCGGACCTTTTGCGTGTTCGGTGTTCCCCCAAAAAATTCATCTT
GAAAATATAGGGAAGAGTAGTGCATTTAGCTTATCGTAGATTCTTTGGGAGATTGTCTTG
GTCAATCTGATGATGGACATGAGGTCAGATTAGAGTTATCATGCAAAGTGCACCAGAGAT
TTGTATAAGAGTGCATGCTTAGCTTGCATGTAAAATCTTGATCGGTAATCGTTATGCCAA
AACTTTTACACAGTATTTCTTTGAAGTAATGATTTGGCTTTGCTACTCTCTACCTTGATT
TTGGACAGATGTGGTGGATAAACTTGCAGTTGGATGTTGTTGGGCATGATTAGGGGGAAA
GTAAAGAGCTCGGTGTGCATCAGCTTCAGTGGGATGCCAATGGTGATTTTTTTGGTCTTG
ATGTTAGTGGAAGCTCCACCTTACAGAATGAATTGAAAAGGCAAAGCTGCTATCATCTTT
TGTCAAGCGTCTCCATCGATGACTCATGAGGTATGCCTTGATCAGATTGTTCAGCTCAGG
GAAGTTGAGGTAAGTAAGAATTTCCCGGCATGTTCAGGATCTTGTTCATCCAAAAGATGT
GCTACATACCAAATTCGCAGCATTATAGTGTGGGTTGTAACTCAGTACTTCAGTCCCAAC
ATGATGAAAGCTTTGCTGTCAAGATGGAATCTGATTCAGTAAAAATCTTCAGTGGTGAGC
ATCTGGAGAAAGAAAAGCATGTGCCTTACCAGGGGGAGATTACCATCTTGAATAAGCTGA
AAAGGGTCAAAATTCAGCTGAGTGATCCCTTTGTCAGAAGGATGGTTGAGAAAAATGTAA
ACAACTTTTCATTATCTTAAGAAGAAGTTAAATAATGTGACTCCTAAGTTGGTGACTCCT
AAGTTGTGAGTACCTAACATGAGCTGTCCACATGATGTGTCTTAAGAGTTGAGATTCCGG
CAAAAGAATTGCTTTGATGTGTGCCTTCACCTAAACATATTGTGGGCTCAATAACAAATT
AGATTACTTGGGC
clustalw multiple alignements is not computed in this case