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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1783#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 3232 fasta sequence
[ATGCAAGCGAGAGCAGAGCAGATCTAAACCCAAAACAACGCAAAGCCCTCTCTCCTCCTCCTCCCCCGCGACACGACACTGTCGACACACCATGCGCCAGCCACAGCTCCGCGCCGCCACCTCGCGCCCGCTCTCATGGCGCTCCAACTGCACGGCTGCTGCGGCGTCCGCCTCCCAGCCGAGCGAGCCGCTCTCCGCCCACTTCACCAACGGCCGGCCCCTCTCGCGCGCCCCGGCCGTGGTGAGGGACCTCTCCTCGGTGCTCCGCGCGATCCTCGCCGCCTCCCCGTCCTCCCACAGCCGCGCGTACCCGCTCCTCAAGTCCGCCGCCTTCGACGCCCGCCTCGCGCCGGACGCGCTCGTCGACGCCGTCCTCTCCGCCGTGGGCGGCCCGGGGTCACGGCAGGCCACCGCGCTCCTCAGCCGCCTCCTCGCCTCCCTGTGCCGCGCCGGCCGCGCTGGCGCGGCCGCCGCCGCCTACGCCAGCATGGAGGCGCGCGGGGTCACCCCGGACGCCAAGTCCCGCACCGACCTCCTCGCCGTCACGGCGCGGAGCGCGTCGGCCGCGGACGCCCTCGCGCTGCTCGCCGAGATGCGGGGGAAGGGGCGCCCCTTGGACGCGTGGATGTTCGACGTGGTGATGCGCGCTTGCTTCAAGGAAGGGATGTACGACGACGCGGTCAGGCTGTTCGACGAAATGCCTGCCTCTGAGATCGAGCCCGACCAGCGCGTGTGCTCTGTCGCTATCGCGTCCCTATGCAAGCTGCGTGACGCCAACCGTGCTCTGCTGGTGCTGAGGAAGATGCAGGATGCGGGGTTCGTGCCGTGGGACTTCACGTTCAACTCCGTGGTGGATGTGCTCGTGAAGGGAGGGAGGATGGAGGAGGCGCTGCACATAAAGGATGAGTTGCTTGCTACGGGGAAGAAAATGAGTGTGGTTCTCGCAACAACGTTGATGCACGGCTATTGCTTGCAACGGGAGGTTAGGAAAGCGCTGGATATATTCGAGGAGACACTAAGGGACGGTCTGGTACCAACCGATGTAACATATACGGTGCTGATCAGAGGTTGTACTGAAGAGGGGATGCCAGAGAAGGCCTATGAGCTGTGCCGCCAGATGAGAGATCATGGATTGTTGCCGAGCACAAATGAGTTCAATATGGTTATCAAGGGCCTTTTGAATGATAAATTGTGGAAGGATGCTGTAAGCTTGTTCAAGGAGATGGCTGATTCTGGGATACCAGATGCCTTCACATACAATATACTAATTCACTGGCTCTGTCAGCGTCGCAAAATTCGCGAAGCGCTTAACTTGTGGGAAAAGATGAATGAAACAGGAGTGAAACCATATATCGTGACATACCACAGCTTGTTGTTGTGTTATTGTGTGAATGGGTGCATGGATGAAGCAGTCAAGCTGTACACTGAGATGCCTGGAAAAGGGTTCACACCTAATGTTGTCACTTACACAACGCTGATGAAAGGGCACATAAATAAGGCTGCTTTTGACAAGGCTTATGCCCTCCTTGCTGAAATGAAACAGAATGGAGTCTCTTGCAATGATTATACATACAACACTCTCATAAATGGCCTTTGTGTGGTTGGCCGAGTTTGTGAAGTTGGTGAAATGCTGAAGAGATTTGAAACTGAAGGTTTTGTTCCAACTGCAATGACATACAATAGTATCATCAATGGATTTATAAAAGCTGGCATGATGGGCTCAGCATTTGCTGTGTATCAGCAGATGTGTGCAAAAGGCATACCTCCCAACATAGTAACATATACCAGTTTCATTGATGGATACTGTAAGACTAGTTGCTGTGACCTGGCACTGAAGATGCTAAATGATGTCAGGTGCAAAGGCCTTCGACCTGATATCGCTGCATATAATTCCTTAATATTTGGGTTTTGCCAAGAGGGGAATATGTCTCATGCACTGCAAGTTCTTGTCCTTATGCTGAAAGATGGTCTTTTACCAAATATTTCAGTCTACAACAGTTTCATTACAGGGTACAAGAATTTGAAGATGATGGAAGAAGCTTTGAGATTGTACGAGAAAATGATTAAAGAAGGAATTGATCTTGATACAGCAACCTACACTACCTTAATTGATGGGTTCTCAAAAGATGGCAATGTAACCTTTGCATTGAAACTATACTCAGAGATGGTGGCTAAGGGTAATATTCCTGATCATATTACTTTCACAGCATTAACACATGGTCTTTGCCGCAACGGAGATATCGATGATGCTAGAAAATTATTGGATGAAATGAATAGGTTAGATATACGCCCTAATGTTTTGATGTACAACATGTTGATAAACGGATACCTCCGTAATGGAAAGCTGCAAGAAGCGTTCCGGTTGCATGATGAAATGCTTGAAAGGAAAATTATGCCAGATGATACAACATATGACATACTAGTTGGCATGAAATCTTTGGGAAGTGACAGTCCCATTGACGCGGAGAATCCTAATTTAAGTTCCACAGGATAAGGATCAAGAGCTGGCTTGAGAAGATTAAACTTTCCATTGTATGGCCAGTGTCAGATTATGAGTTTTGCTATATATAAAGTGAAATCTTAGCTATGGCAAATAGAAGCAAAGTCTGCATAACTCAGGCTGTTGTATCGGCACTGTCAACCTTGAGGGGAGGGCAAGCGTTGATTGAGCTGAGGATGGTGAGGGGCGTGTTGCTGTGGTGCGCGAGTCTGTTGATCATGTTGTAGAACATCACCCTTGCCTGCAGTGTGCTCCCTCACCAAATCCAGAAATTCATCATAAAAGAGGATGGAGATGGAGACAGATGGAGCAGCTCATGTCTTGATTCACCTGATGCTCACTACACTCACATTACCTCCTCTACTGGTTGTTCGGAGAGGCAAGGGGCGGCTGCCAAGAGAAGTAACTAGTAGAGGATGATCAATGAACATCTAAGATGCTCAATGAACGCTAATCAAAGGAGGATATGTTTGACAATGGGACAAAGTCTTAAAACGCTGTACTGGCTAAAGAAGAACAAATATATGGAATATTGGAATCATCTGCCAGGCTTCTCTGGGAGCACATCTTCATTCTTGACAGCTTTTCACTCGTGTCCAAATCATAACGATTTTACCAAATATAAGGATTCTAGAAAGCTTCAAAGGTTATGGTTTGTCGTTGCAATTGCCAATGTCTATACTATCGTTCACCTGCCTACTGTTGCCTACAAATCAATAGAATTATTCACAA]
[+] EMBL AK120659 [ATGCAAGCGAGAGCAGAGCAGATCTAAACCCAAAACAACGCAAAGCCCTCTCTCCTCCTCCTCCCCCGCGACACGACACTGTCGACACACCATGCGCCAGCCACAGCTCCGCGCCGCCACCTCGCGCCCGCTCTCATGGCGCTCCAACTGCACGGCTGCTGCGGCGTCCGCCTCCCAGCCGAGCGAGCCGCTCTCCGCCCACTTCACCAACGGCCGGCCCCTCTCGCGCGCCCCGGCCGTGGTGAGGGACCTCTCCTCGGTGCTCCGCGCGATCCTCGCCGCCTCCCCGTCCTCCCACAGCCGCGCGTACCCGCTCCTCAAGTCCGCCGCCTTCGACGCCCGCCTCGCGCCGGACGCGCTCGTCGACGCCGTCCTCTCCGCCGTGGGCGGCCCGGGGTCACGGCAGGCCACCGCGCTCCTCAGCCGCCTCCTCGCCTCCCTGTGCCGCGCCGGCCGCGCTGGCGCGGCCGCCGCCGCCTACGCCAGCATGGAGGCGCGCGGGGTCACCCCGGACGCCAAGTCCCGCACCGACCTCCTCGCCGTCACGGCGCGGAGCGCGTCGGCCGCGGACGCCCTCGCGCTGCTCGCCGAGATGCGGGGGAAGGGGCGCCCCTTGGACGCGTGGATGTTCGACGTGGTGATGCGCGCTTGCTTCAAGGAAGGGATGTACGACGACGCGGTCAGGCTGTTCGACGAAATGCCTGCCTCTGAGATCGAGCCCGACCAGCGCGTGTGCTCTGTCGCTATCGCGTCCCTATGCAAGCTGCGTGACGCCAACCGTGCTCTGCTGGTGCTGAGGAAGATGCAGGATGCGGGGTTCGTGCCGTGGGACTTCACGTTCAACTCCGTGGTGGATGTGCTCGTGAAGGGAGGGAGGATGGAGGAGGCGCTGCACATAAAGGATGAGTTGCTTGCTACGGGGAAGAAAATGAGTGTGGTTCTCGCAACAACGTTGATGCACGGCTATTGCTTGCAACGGGAGGTTAGGAAAGCGCTGGATATATTCGAGGAGACACTAAGGGACGGTCTGGTACCAACCGATGTAACATATACGGTGCTGATCAGAGGTTGTACTGAAGAGGGGATGCCAGAGAAGGCCTATGAGCTGTGCCGCCAGATGAGAGATCATGGATTGTTGCCGAGCACAAATGAGTTCAATATGGTTATCAAGGGCCTTTTGAATGATAAATTGTGGAAGGATGCTGTAAGCTTGTTCAAGGAGATGGCTGATTCTGGGATACCAGATGCCTTCACATACAATATACTAATTCACTGGCTCTGTCAGCGTCGCAAAATTCGCGAAGCGCTTAACTTGTGGGAAAAGATGAATGAAACAGGAGTGAAACCATATATCGTGACATACCACAGCTTGTTGTTGTGTTATTGTGTGAATGGGTGCATGGATGAAGCAGTCAAGCTGTACACTGAGATGCCTGGAAAAGGGTTCACACCTAATGTTGTCACTTACACAACGCTGATGAAAGGGCACATAAATAAGGCTGCTTTTGACAAGGCTTATGCCCTCCTTGCTGAAATGAAACAGAATGGAGTCTCTTGCAATGATTATACATACAACACTCTCATAAATGGCCTTTGTGTGGTTGGCCGAGTTTGTGAAGTTGGTGAAATGCTGAAGAGATTTGAAACTGAAGGTTTTGTTCCAACTGCAATGACATACAATAGTATCATCAATGGATTTATAAAAGCTGGCATGATGGGCTCAGCATTTGCTGTGTATCAGCAGATGTGTGCAAAAGGCATACCTCCCAACATAGTAACATATACCAGTTTCATTGATGGATACTGTAAGACTAGTTGCTGTGACCTGGCACTGAAGATGCTAAATGATGTCAGGTGCAAAGGCCTTCGACCTGATATCGCTGCATATAATTCCTTAATATTTGGGTTTTGCCAAGAGGGGAATATGTCTCATGCACTGCAAGTTCTTGTCCTTATGCTGAAAGATGGTCTTTTACCAAATATTTCAGTCTACAACAGTTTCATTACAGGGTACAAGAATTTGAAGATGATGGAAGAAGCTTTGAGATTGTACGAGAAAATGATTAAAGAAGGAATTGATCTTGATACAGCAACCTACACTACCTTAATTGATGGGTTCTCAAAAGATGGCAATGTAACCTTTGCATTGAAACTATACTCAGAGATGGTGGCTAAGGGTAATATTCCTGATCATATTACTTTCACAGCATTAACACATGGTCTTTGCCGCAACGGAGATATCGATGATGCTAGAAAATTATTGGATGAAATGAATAGGTTAGATATACGCCCTAATGTTTTGATGTACAACATGTTGATAAACGGATACCTCCGTAATGGAAAGCTGCAAGAAGCGTTCCGGTTGCATGATGAAATGCTTGAAAGGAAAATTATGCCAGATGATACAACATATGACATACTAGTTGGCATGAAATCTTTGGGAAGTGACAGTCCCATTGACGCGGAGAATCCTAATTTAAGTTCCACAGGATAAGGATCAAGAGCTGGCTTGAGAAGATTAAACTTTCCATTGTATGGCCAGTGTCAGATTATGAGTTTTGCTATATATAAAGTGAAATCTTAGCTATGGCAAATAGAAGCAAAGTCTGCATAACTCAGGCTGTTGTATCGGCACTGTCAACCTTGAGGGGAGGGCAAGCGTTGATTGAGCTGAGGATGGTGAGGGGCGTGTTGCTGTGGTGCGCGAGTCTGTTGATCATGTTGTAGAACATCACCCTTGCCTGCAGTGTGCTCCCTCACCAAATCCAGAAATTCATCATAAAAGAGGATGGAGATGGAGACAGATGGAGCAGCTCATGTCTTGATTCACCTGATGCTCACTACACTCACATTACCTCCTCTACTGGTTGTTCGGAGAGGCAAGGGGCGGCTGCCAAGAGAAGTAACTAGTAGAGGATGATCAATGAACATCTAAGATGCTCAATGAACGCTAATCAAAGGAGGATATGTTTGACAATGGGACAAAGTCTTAAAACGCTGTACTGGCTAAAGAAGAACAAATATATGGAATATTGGAATCATCTGCCAGGCTTCTCTGGGAGCACATCTTCATTCTTGACAGCTTTTCACTCGTGTCCAAATCATAACGATTTTACCAAATATAAGGATTCTAGAAAGCTTCAAAGGTTATGGTTTGTCGTTGCAATTGCCAATGTCTATACTATCGTTCACCTGCCTACTGTTGCCTACAAATCAATAGAATTATTCACAA]
consensusID : consensus_1783#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2676 fasta sequence
[TGTCGACACGCCATGCGCCAGCCACAGCTCCGCGCCGCCACCTCGCGCCCGCTCTCATGGCGCTCCAACTGCACGGCTGCTGCGGCGTCCGCCTCCCAGCCGAGCGAGCCGCTCTCCGCCCACTTCACCAACGGCCGGCCCCTCTCGCGCGCCCCGGCCGTGGTGAGGGACCTCTCCTCGGTGCTCCGCGCGATCCTCGCCGCCTCCCCGTCCTCCCACAGCCGCGCGTACCCGCTCCTCAAGTCCGCCGCCTTCGACGCCCGCCTCGCGCCGGACGCGCTCGTCGACGCCGTCCTCTCCGCCGTGGGCGGCCCGGGGTCACGGCAGGCCACCGCGCTCCTCAGCCGCCTCCTCGCCTCCCTGTGCCGCGCCGGCCGCGCTGGCGCGGCCGCCGCCGCCTACGCCAGCATGGAGGCGCGCGGGGTCACCCCGGACGCCAAGTCCCGCACCGACCTCCTCGCCGTCACGGCGCGGAGCGCGTCGGCCGCGGACGCCCTCGCGCTGCTCGCCGAGATGCGGGGGAAGGGGCGCCCCTTGGACGCGTGGATGTTCGACGTGGTGATGCGCGCTTGCTTCAAGGAAGGGATGTACGACGACGCGGTCAGGCTGTTCGACGAAATGCCTGCCTCTGAGATCGAGCCCGACCAGCGCGTGTGCTCTGTCGCTATCGCGTCCCTATGCAAGCTGCGTGACGCCAACCGTGCTCTGCTGGTGCTGAGGAAGATGCAGGATGCGGGGTTCGTGCCGTGGGACTTCACGTTCAACTCCGTGGTGGATGTGCTCGTGAAGGGAGGGAGGATGGAGGAGGCGCTGCACATAAAGGATGAGTTGCTTGCTACGGGGAAGAAAATGAGTGTGGTTCTCGCAACAACGTTGATGCACGGCTGTTGCTTGCAACGGGAGGTTAGGAAAGCGCTGGATATATTCGAGGAGACACTAAGGGACGGTCTGGTACCAACCGATGTAACATATACGGTGCTGATCAGAGGTTGTACTGAAGAGGGGATGCCAGAGAAGGCCTATGAGCTGTACCGCCAGATGAGAGATCATGGATTGTTGCCGAGCACAAATGAGTTCAATATGGTTATCAAAGGCCTTTTGAATGATAAATTGTGGAAGGATGCTGTAAGCTTGTTCAAGGAGATGGCTGATTCTGGGATACCAGATGCCTTCACATACAATATACTAATTCACTGGCTCTGTCAGCGTCGCAAAATTCGCGAAGCGCTTAACTTGTGGGAAAAGATGAATGAAACAGGAGTGAAACCATATATCGTGACATACCACAGCTTGTTGTTGTGTTATTGTGTGAATGGGTGCATGGATGAAGCAGTCAAGCTGTACACTGAGATGCCTGGAAAAGGGTTCACACCTAATGTTGTCACTTACACAACGCTGATGAAAGGGCACATAAATAAGGCTGCTTTTGACAAGGCTTATGCCCTCCTTGCTGAAATGAAACAGAATGGAGTCTCTTGCAATGATTATACATACAACACTCTCATAAATGGCCTTTGTGTGGTTGGCCGAGTTTGTGAAGTTGGTGAAATGCTGAAGAGATTTGAAACTGAAGGTTTTGTTCCAACTGCAATGACATACAATAGTATCATCAATGGATTTATAAAAGCTGGCATGATGGGCTCAGCATTTGCTGTGTATCAGCAGATGTGTGCAAAAGGCATACCTCCCAACATAGTAACATATACCAGTTTCATTGATGGATACTGTAAGACTAGTTGCTGTGACCTGGCACTGAAGATGCTAAATGATGTCAGGTGCAAAGGCCTTCGACCTGATATCGCTGCATATAATTCCTTAATATTTGGGTTTTGCCAAGAGGGGAATATGTCTCATGCACTGCAAGTTCTTGTCCTTATGCTGAAAGATGGTCTTTTACCAAATATTTCAGTCTACAACAGTTTCATTACAGGGTACAAGAATTTGAAAATGATGGAAGAAGCTTTGAGATTGTACGAGAAAATGATTAAAGAAGGAATTGATCTTGATACAGCAACCTACACTACCTTAATTGATGGGTTCTCAAAAGATGGCAATGTAACCTTTGCATTGAAACTATACTCAGAGATGGTGGCTAAGGGTAATATTCCTGATCATATTACTTTCACAGCATTAACACATGGTCTTTGCCGCAACGGAGATATCGATGATGCTAGAAAATTATTGGATGAAATGAATAGGTTAGATATACGCCCTAATGTTTTGATGTACAACATGTTGATAAACGGATACCTCCGTAATGGAAAGCTGCAAGAAGCGTTCCGGTTGCATGATGAAATGCTTGAAAGGAAAATTATGCCAGATGATACAACATATGACATACTAGTTGGCATGAAATCTTTGGGAAGTGACAGTCCCATTGACGCGGAGAATCCTAATTTAAGTTCCACAGGATAAGGATCAAGAGCTGGCTTGAGAAGATTAAACTTTCCATTGTATGGCCAGTGTCAGATTATGAGTTTTGCTATATATAAAGTGAAATCTTAGCTATGGCAAATAGAAGCAAAGGTAAGCATTGAGATTCAGTTACTAACAAGAATTCACCTTTTATTATTATGTAATCTCTATTTTACCATTGGCACTTTGTGATTACTTCTGTACTATACATTAATTTGTGTCCAATCAATGTACATGATTTTCCCTTTTTGGTATTATTGT]
[+] EMBL AK110291 [TGTCGACACGCCATGCGCCAGCCACAGCTCCGCGCCGCCACCTCGCGCCCGCTCTCATGGCGCTCCAACTGCACGGCTGCTGCGGCGTCCGCCTCCCAGCCGAGCGAGCCGCTCTCCGCCCACTTCACCAACGGCCGGCCCCTCTCGCGCGCCCCGGCCGTGGTGAGGGACCTCTCCTCGGTGCTCCGCGCGATCCTCGCCGCCTCCCCGTCCTCCCACAGCCGCGCGTACCCGCTCCTCAAGTCCGCCGCCTTCGACGCCCGCCTCGCGCCGGACGCGCTCGTCGACGCCGTCCTCTCCGCCGTGGGCGGCCCGGGGTCACGGCAGGCCACCGCGCTCCTCAGCCGCCTCCTCGCCTCCCTGTGCCGCGCCGGCCGCGCTGGCGCGGCCGCCGCCGCCTACGCCAGCATGGAGGCGCGCGGGGTCACCCCGGACGCCAAGTCCCGCACCGACCTCCTCGCCGTCACGGCGCGGAGCGCGTCGGCCGCGGACGCCCTCGCGCTGCTCGCCGAGATGCGGGGGAAGGGGCGCCCCTTGGACGCGTGGATGTTCGACGTGGTGATGCGCGCTTGCTTCAAGGAAGGGATGTACGACGACGCGGTCAGGCTGTTCGACGAAATGCCTGCCTCTGAGATCGAGCCCGACCAGCGCGTGTGCTCTGTCGCTATCGCGTCCCTATGCAAGCTGCGTGACGCCAACCGTGCTCTGCTGGTGCTGAGGAAGATGCAGGATGCGGGGTTCGTGCCGTGGGACTTCACGTTCAACTCCGTGGTGGATGTGCTCGTGAAGGGAGGGAGGATGGAGGAGGCGCTGCACATAAAGGATGAGTTGCTTGCTACGGGGAAGAAAATGAGTGTGGTTCTCGCAACAACGTTGATGCACGGCTGTTGCTTGCAACGGGAGGTTAGGAAAGCGCTGGATATATTCGAGGAGACACTAAGGGACGGTCTGGTACCAACCGATGTAACATATACGGTGCTGATCAGAGGTTGTACTGAAGAGGGGATGCCAGAGAAGGCCTATGAGCTGTACCGCCAGATGAGAGATCATGGATTGTTGCCGAGCACAAATGAGTTCAATATGGTTATCAAAGGCCTTTTGAATGATAAATTGTGGAAGGATGCTGTAAGCTTGTTCAAGGAGATGGCTGATTCTGGGATACCAGATGCCTTCACATACAATATACTAATTCACTGGCTCTGTCAGCGTCGCAAAATTCGCGAAGCGCTTAACTTGTGGGAAAAGATGAATGAAACAGGAGTGAAACCATATATCGTGACATACCACAGCTTGTTGTTGTGTTATTGTGTGAATGGGTGCATGGATGAAGCAGTCAAGCTGTACACTGAGATGCCTGGAAAAGGGTTCACACCTAATGTTGTCACTTACACAACGCTGATGAAAGGGCACATAAATAAGGCTGCTTTTGACAAGGCTTATGCCCTCCTTGCTGAAATGAAACAGAATGGAGTCTCTTGCAATGATTATACATACAACACTCTCATAAATGGCCTTTGTGTGGTTGGCCGAGTTTGTGAAGTTGGTGAAATGCTGAAGAGATTTGAAACTGAAGGTTTTGTTCCAACTGCAATGACATACAATAGTATCATCAATGGATTTATAAAAGCTGGCATGATGGGCTCAGCATTTGCTGTGTATCAGCAGATGTGTGCAAAAGGCATACCTCCCAACATAGTAACATATACCAGTTTCATTGATGGATACTGTAAGACTAGTTGCTGTGACCTGGCACTGAAGATGCTAAATGATGTCAGGTGCAAAGGCCTTCGACCTGATATCGCTGCATATAATTCCTTAATATTTGGGTTTTGCCAAGAGGGGAATATGTCTCATGCACTGCAAGTTCTTGTCCTTATGCTGAAAGATGGTCTTTTACCAAATATTTCAGTCTACAACAGTTTCATTACAGGGTACAAGAATTTGAAAATGATGGAAGAAGCTTTGAGATTGTACGAGAAAATGATTAAAGAAGGAATTGATCTTGATACAGCAACCTACACTACCTTAATTGATGGGTTCTCAAAAGATGGCAATGTAACCTTTGCATTGAAACTATACTCAGAGATGGTGGCTAAGGGTAATATTCCTGATCATATTACTTTCACAGCATTAACACATGGTCTTTGCCGCAACGGAGATATCGATGATGCTAGAAAATTATTGGATGAAATGAATAGGTTAGATATACGCCCTAATGTTTTGATGTACAACATGTTGATAAACGGATACCTCCGTAATGGAAAGCTGCAAGAAGCGTTCCGGTTGCATGATGAAATGCTTGAAAGGAAAATTATGCCAGATGATACAACATATGACATACTAGTTGGCATGAAATCTTTGGGAAGTGACAGTCCCATTGACGCGGAGAATCCTAATTTAAGTTCCACAGGATAAGGATCAAGAGCTGGCTTGAGAAGATTAAACTTTCCATTGTATGGCCAGTGTCAGATTATGAGTTTTGCTATATATAAAGTGAAATCTTAGCTATGGCAAATAGAAGCAAAGGTAAGCATTGAGATTCAGTTACTAACAAGAATTCACCTTTTATTATTATGTAATCTCTATTTTACCATTGGCACTTTGTGATTACTTCTGTACTATACATTAATTTGTGTCCAATCAATGTACATGATTTTCCCTTTTTGGTATTATTGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1783#0 ATGCAAGCGAGAGCAGAGCAGATCTAAACCCAAAACAACGCAAAGCCCTCTCTCCTCCTC 60
consensus_1783#1 ------------------------------------------------------------
consensus_1783#0 CTCCCCCGCGACACGACACTGTCGACACACCATGCGCCAGCCACAGCTCCGCGCCGCCAC 120
consensus_1783#1 -------------------TGTCGACACGCCATGCGCCAGCCACAGCTCCGCGCCGCCAC 41
********* *******************************
consensus_1783#0 CTCGCGCCCGCTCTCATGGCGCTCCAACTGCACGGCTGCTGCGGCGTCCGCCTCCCAGCC 180
consensus_1783#1 CTCGCGCCCGCTCTCATGGCGCTCCAACTGCACGGCTGCTGCGGCGTCCGCCTCCCAGCC 101
************************************************************
consensus_1783#0 GAGCGAGCCGCTCTCCGCCCACTTCACCAACGGCCGGCCCCTCTCGCGCGCCCCGGCCGT 240
consensus_1783#1 GAGCGAGCCGCTCTCCGCCCACTTCACCAACGGCCGGCCCCTCTCGCGCGCCCCGGCCGT 161
************************************************************
consensus_1783#0 GGTGAGGGACCTCTCCTCGGTGCTCCGCGCGATCCTCGCCGCCTCCCCGTCCTCCCACAG 300
consensus_1783#1 GGTGAGGGACCTCTCCTCGGTGCTCCGCGCGATCCTCGCCGCCTCCCCGTCCTCCCACAG 221
************************************************************
consensus_1783#0 CCGCGCGTACCCGCTCCTCAAGTCCGCCGCCTTCGACGCCCGCCTCGCGCCGGACGCGCT 360
consensus_1783#1 CCGCGCGTACCCGCTCCTCAAGTCCGCCGCCTTCGACGCCCGCCTCGCGCCGGACGCGCT 281
************************************************************
consensus_1783#0 CGTCGACGCCGTCCTCTCCGCCGTGGGCGGCCCGGGGTCACGGCAGGCCACCGCGCTCCT 420
consensus_1783#1 CGTCGACGCCGTCCTCTCCGCCGTGGGCGGCCCGGGGTCACGGCAGGCCACCGCGCTCCT 341
************************************************************
consensus_1783#0 CAGCCGCCTCCTCGCCTCCCTGTGCCGCGCCGGCCGCGCTGGCGCGGCCGCCGCCGCCTA 480
consensus_1783#1 CAGCCGCCTCCTCGCCTCCCTGTGCCGCGCCGGCCGCGCTGGCGCGGCCGCCGCCGCCTA 401
************************************************************
consensus_1783#0 CGCCAGCATGGAGGCGCGCGGGGTCACCCCGGACGCCAAGTCCCGCACCGACCTCCTCGC 540
consensus_1783#1 CGCCAGCATGGAGGCGCGCGGGGTCACCCCGGACGCCAAGTCCCGCACCGACCTCCTCGC 461
************************************************************
consensus_1783#0 CGTCACGGCGCGGAGCGCGTCGGCCGCGGACGCCCTCGCGCTGCTCGCCGAGATGCGGGG 600
consensus_1783#1 CGTCACGGCGCGGAGCGCGTCGGCCGCGGACGCCCTCGCGCTGCTCGCCGAGATGCGGGG 521
************************************************************
consensus_1783#0 GAAGGGGCGCCCCTTGGACGCGTGGATGTTCGACGTGGTGATGCGCGCTTGCTTCAAGGA 660
consensus_1783#1 GAAGGGGCGCCCCTTGGACGCGTGGATGTTCGACGTGGTGATGCGCGCTTGCTTCAAGGA 581
************************************************************
consensus_1783#0 AGGGATGTACGACGACGCGGTCAGGCTGTTCGACGAAATGCCTGCCTCTGAGATCGAGCC 720
consensus_1783#1 AGGGATGTACGACGACGCGGTCAGGCTGTTCGACGAAATGCCTGCCTCTGAGATCGAGCC 641
************************************************************
consensus_1783#0 CGACCAGCGCGTGTGCTCTGTCGCTATCGCGTCCCTATGCAAGCTGCGTGACGCCAACCG 780
consensus_1783#1 CGACCAGCGCGTGTGCTCTGTCGCTATCGCGTCCCTATGCAAGCTGCGTGACGCCAACCG 701
************************************************************
consensus_1783#0 TGCTCTGCTGGTGCTGAGGAAGATGCAGGATGCGGGGTTCGTGCCGTGGGACTTCACGTT 840
consensus_1783#1 TGCTCTGCTGGTGCTGAGGAAGATGCAGGATGCGGGGTTCGTGCCGTGGGACTTCACGTT 761
************************************************************
consensus_1783#0 CAACTCCGTGGTGGATGTGCTCGTGAAGGGAGGGAGGATGGAGGAGGCGCTGCACATAAA 900
consensus_1783#1 CAACTCCGTGGTGGATGTGCTCGTGAAGGGAGGGAGGATGGAGGAGGCGCTGCACATAAA 821
************************************************************
consensus_1783#0 GGATGAGTTGCTTGCTACGGGGAAGAAAATGAGTGTGGTTCTCGCAACAACGTTGATGCA 960
consensus_1783#1 GGATGAGTTGCTTGCTACGGGGAAGAAAATGAGTGTGGTTCTCGCAACAACGTTGATGCA 881
************************************************************
consensus_1783#0 CGGCTATTGCTTGCAACGGGAGGTTAGGAAAGCGCTGGATATATTCGAGGAGACACTAAG 1020
consensus_1783#1 CGGCTGTTGCTTGCAACGGGAGGTTAGGAAAGCGCTGGATATATTCGAGGAGACACTAAG 941
***** ******************************************************
consensus_1783#0 GGACGGTCTGGTACCAACCGATGTAACATATACGGTGCTGATCAGAGGTTGTACTGAAGA 1080
consensus_1783#1 GGACGGTCTGGTACCAACCGATGTAACATATACGGTGCTGATCAGAGGTTGTACTGAAGA 1001
************************************************************
consensus_1783#0 GGGGATGCCAGAGAAGGCCTATGAGCTGTGCCGCCAGATGAGAGATCATGGATTGTTGCC 1140
consensus_1783#1 GGGGATGCCAGAGAAGGCCTATGAGCTGTACCGCCAGATGAGAGATCATGGATTGTTGCC 1061
***************************** ******************************
consensus_1783#0 GAGCACAAATGAGTTCAATATGGTTATCAAGGGCCTTTTGAATGATAAATTGTGGAAGGA 1200
consensus_1783#1 GAGCACAAATGAGTTCAATATGGTTATCAAAGGCCTTTTGAATGATAAATTGTGGAAGGA 1121
****************************** *****************************
consensus_1783#0 TGCTGTAAGCTTGTTCAAGGAGATGGCTGATTCTGGGATACCAGATGCCTTCACATACAA 1260
consensus_1783#1 TGCTGTAAGCTTGTTCAAGGAGATGGCTGATTCTGGGATACCAGATGCCTTCACATACAA 1181
************************************************************
consensus_1783#0 TATACTAATTCACTGGCTCTGTCAGCGTCGCAAAATTCGCGAAGCGCTTAACTTGTGGGA 1320
consensus_1783#1 TATACTAATTCACTGGCTCTGTCAGCGTCGCAAAATTCGCGAAGCGCTTAACTTGTGGGA 1241
************************************************************
consensus_1783#0 AAAGATGAATGAAACAGGAGTGAAACCATATATCGTGACATACCACAGCTTGTTGTTGTG 1380
consensus_1783#1 AAAGATGAATGAAACAGGAGTGAAACCATATATCGTGACATACCACAGCTTGTTGTTGTG 1301
************************************************************
consensus_1783#0 TTATTGTGTGAATGGGTGCATGGATGAAGCAGTCAAGCTGTACACTGAGATGCCTGGAAA 1440
consensus_1783#1 TTATTGTGTGAATGGGTGCATGGATGAAGCAGTCAAGCTGTACACTGAGATGCCTGGAAA 1361
************************************************************
consensus_1783#0 AGGGTTCACACCTAATGTTGTCACTTACACAACGCTGATGAAAGGGCACATAAATAAGGC 1500
consensus_1783#1 AGGGTTCACACCTAATGTTGTCACTTACACAACGCTGATGAAAGGGCACATAAATAAGGC 1421
************************************************************
consensus_1783#0 TGCTTTTGACAAGGCTTATGCCCTCCTTGCTGAAATGAAACAGAATGGAGTCTCTTGCAA 1560
consensus_1783#1 TGCTTTTGACAAGGCTTATGCCCTCCTTGCTGAAATGAAACAGAATGGAGTCTCTTGCAA 1481
************************************************************
consensus_1783#0 TGATTATACATACAACACTCTCATAAATGGCCTTTGTGTGGTTGGCCGAGTTTGTGAAGT 1620
consensus_1783#1 TGATTATACATACAACACTCTCATAAATGGCCTTTGTGTGGTTGGCCGAGTTTGTGAAGT 1541
************************************************************
consensus_1783#0 TGGTGAAATGCTGAAGAGATTTGAAACTGAAGGTTTTGTTCCAACTGCAATGACATACAA 1680
consensus_1783#1 TGGTGAAATGCTGAAGAGATTTGAAACTGAAGGTTTTGTTCCAACTGCAATGACATACAA 1601
************************************************************
consensus_1783#0 TAGTATCATCAATGGATTTATAAAAGCTGGCATGATGGGCTCAGCATTTGCTGTGTATCA 1740
consensus_1783#1 TAGTATCATCAATGGATTTATAAAAGCTGGCATGATGGGCTCAGCATTTGCTGTGTATCA 1661
************************************************************
consensus_1783#0 GCAGATGTGTGCAAAAGGCATACCTCCCAACATAGTAACATATACCAGTTTCATTGATGG 1800
consensus_1783#1 GCAGATGTGTGCAAAAGGCATACCTCCCAACATAGTAACATATACCAGTTTCATTGATGG 1721
************************************************************
consensus_1783#0 ATACTGTAAGACTAGTTGCTGTGACCTGGCACTGAAGATGCTAAATGATGTCAGGTGCAA 1860
consensus_1783#1 ATACTGTAAGACTAGTTGCTGTGACCTGGCACTGAAGATGCTAAATGATGTCAGGTGCAA 1781
************************************************************
consensus_1783#0 AGGCCTTCGACCTGATATCGCTGCATATAATTCCTTAATATTTGGGTTTTGCCAAGAGGG 1920
consensus_1783#1 AGGCCTTCGACCTGATATCGCTGCATATAATTCCTTAATATTTGGGTTTTGCCAAGAGGG 1841
************************************************************
consensus_1783#0 GAATATGTCTCATGCACTGCAAGTTCTTGTCCTTATGCTGAAAGATGGTCTTTTACCAAA 1980
consensus_1783#1 GAATATGTCTCATGCACTGCAAGTTCTTGTCCTTATGCTGAAAGATGGTCTTTTACCAAA 1901
************************************************************
consensus_1783#0 TATTTCAGTCTACAACAGTTTCATTACAGGGTACAAGAATTTGAAGATGATGGAAGAAGC 2040
consensus_1783#1 TATTTCAGTCTACAACAGTTTCATTACAGGGTACAAGAATTTGAAAATGATGGAAGAAGC 1961
********************************************* **************
consensus_1783#0 TTTGAGATTGTACGAGAAAATGATTAAAGAAGGAATTGATCTTGATACAGCAACCTACAC 2100
consensus_1783#1 TTTGAGATTGTACGAGAAAATGATTAAAGAAGGAATTGATCTTGATACAGCAACCTACAC 2021
************************************************************
consensus_1783#0 TACCTTAATTGATGGGTTCTCAAAAGATGGCAATGTAACCTTTGCATTGAAACTATACTC 2160
consensus_1783#1 TACCTTAATTGATGGGTTCTCAAAAGATGGCAATGTAACCTTTGCATTGAAACTATACTC 2081
************************************************************
consensus_1783#0 AGAGATGGTGGCTAAGGGTAATATTCCTGATCATATTACTTTCACAGCATTAACACATGG 2220
consensus_1783#1 AGAGATGGTGGCTAAGGGTAATATTCCTGATCATATTACTTTCACAGCATTAACACATGG 2141
************************************************************
consensus_1783#0 TCTTTGCCGCAACGGAGATATCGATGATGCTAGAAAATTATTGGATGAAATGAATAGGTT 2280
consensus_1783#1 TCTTTGCCGCAACGGAGATATCGATGATGCTAGAAAATTATTGGATGAAATGAATAGGTT 2201
************************************************************
consensus_1783#0 AGATATACGCCCTAATGTTTTGATGTACAACATGTTGATAAACGGATACCTCCGTAATGG 2340
consensus_1783#1 AGATATACGCCCTAATGTTTTGATGTACAACATGTTGATAAACGGATACCTCCGTAATGG 2261
************************************************************
consensus_1783#0 AAAGCTGCAAGAAGCGTTCCGGTTGCATGATGAAATGCTTGAAAGGAAAATTATGCCAGA 2400
consensus_1783#1 AAAGCTGCAAGAAGCGTTCCGGTTGCATGATGAAATGCTTGAAAGGAAAATTATGCCAGA 2321
************************************************************
consensus_1783#0 TGATACAACATATGACATACTAGTTGGCATGAAATCTTTGGGAAGTGACAGTCCCATTGA 2460
consensus_1783#1 TGATACAACATATGACATACTAGTTGGCATGAAATCTTTGGGAAGTGACAGTCCCATTGA 2381
************************************************************
consensus_1783#0 CGCGGAGAATCCTAATTTAAGTTCCACAGGATAAGGATCAAGAGCTGGCTTGAGAAGATT 2520
consensus_1783#1 CGCGGAGAATCCTAATTTAAGTTCCACAGGATAAGGATCAAGAGCTGGCTTGAGAAGATT 2441
************************************************************
consensus_1783#0 AAACTTTCCATTGTATGGCCAGTGTCAGATTATGAGTTTTGCTATATATAAAGTGAAATC 2580
consensus_1783#1 AAACTTTCCATTGTATGGCCAGTGTCAGATTATGAGTTTTGCTATATATAAAGTGAAATC 2501
************************************************************
consensus_1783#0 TTAGCTATGGCAAATAGAAGCAAAGTCTGCATAACTCAGGCTGTTGTATCGGCACTG--T 2638
consensus_1783#1 TTAGCTATGGCAAATAGAAGCAAAGGT--AAGCATTGAGATTCAGTTACTAACAAGAATT 2559
************************* * * * ** * ** ** *
consensus_1783#0 CAACCTTGAGGGGAGGGCAAGCGTTGATTGAGCTGAGGATGGTGAGGGGCGTGTTGCTGT 2698
consensus_1783#1 CACCTTTTATTATTATGTAATCTCTATTTTACCATTGGCACTTTGTGATTACTTCTGTAC 2619
** * ** * * ** * * ** * * ** * * * *
consensus_1783#0 GGTGCGCGAGTCTGTTGATCATGTTGTAGAACATCACCCTTGCCTGCAGTGTGCTCCCTC 2758
consensus_1783#1 TATACATTAATTTGT--GTCCAATCAATGTACATGATTTTCCCTTTTTG-GTATTATTGT 2676
* * * * *** ** * * **** * * * * * ** *
consensus_1783#0 ACCAAATCCAGAAATTCATCATAAAAGAGGATGGAGATGGAGACAGATGGAGCAGCTCAT 2818
consensus_1783#1 ------------------------------------------------------------
consensus_1783#0 GTCTTGATTCACCTGATGCTCACTACACTCACATTACCTCCTCTACTGGTTGTTCGGAGA 2878
consensus_1783#1 ------------------------------------------------------------
consensus_1783#0 GGCAAGGGGCGGCTGCCAAGAGAAGTAACTAGTAGAGGATGATCAATGAACATCTAAGAT 2938
consensus_1783#1 ------------------------------------------------------------
consensus_1783#0 GCTCAATGAACGCTAATCAAAGGAGGATATGTTTGACAATGGGACAAAGTCTTAAAACGC 2998
consensus_1783#1 ------------------------------------------------------------
consensus_1783#0 TGTACTGGCTAAAGAAGAACAAATATATGGAATATTGGAATCATCTGCCAGGCTTCTCTG 3058
consensus_1783#1 ------------------------------------------------------------
consensus_1783#0 GGAGCACATCTTCATTCTTGACAGCTTTTCACTCGTGTCCAAATCATAACGATTTTACCA 3118
consensus_1783#1 ------------------------------------------------------------
consensus_1783#0 AATATAAGGATTCTAGAAAGCTTCAAAGGTTATGGTTTGTCGTTGCAATTGCCAATGTCT 3178
consensus_1783#1 ------------------------------------------------------------
consensus_1783#0 ATACTATCGTTCACCTGCCTACTGTTGCCTACAAATCAATAGAATTATTCACAA 3232
consensus_1783#1 ------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||