cluster # 1790

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Oryza sativa
cluster # 1790 cluster # 1790 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1790#0 length = 970 sequences # 2

consensusID : consensus_1790#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 970
fasta sequence

                              [AAATCCTCCTCCCTCATCAGTCGTCACGCCCACCACCCCACCAAATCCTCCCTTCGTCATGCCCGGCGCCGGCTCTCCCCTCCTCCCTTGCCGGCGTCCTCCCCTCCTCCCTCCGCCAGCGCGCTTCAATGAATGCACGGCGGAGTGGCCAGCGAGCTCTCGGCGGCGCGGATGGAGGCTGGGTGTGGCCGACGAGCTCCCCGCAGCAGGCCTCAACGCCGGCGCAGATGGCGATGAGCTCGGGGCGGATCTGGCGGCTTCGACGCCTCCTCACCGGCATGGGCTCGGCCGGCGTCTCCCTCCTCCCTCTGCCGGCATGAGCTCAGCCGGCGTCCCTCTCCTCCCTCCGCCGGCACCAGCTGGCCTCTTCCCCACCTCAGCCACCTCCTCGGGGCCGAGCAGCGCCGGCTCTCCTCTCCTCCCTTCACCGGCGGCGGCGCGGATCTGGGCCCATCCTCCCTCGGCCAACGACGAGCCGCTTGTGGTCGTCGTCTTCCTCGCTTCGTCTCCACTTCCGGCTGGCGACAAGGTTTTGGAGGCGGCGGCGCGGAGCGGAGCACGGGAACGACGACGAGGTCGGCGACGCGGAGCGGGAGGGCGCGAGGTGACAGCGAGTCGGAGGCACGCCCTCCACAATGCAGGTTCCAGCCGTTTCTCCGCCACGCGTGGTCTTGCGCTAGCGAGAAATCGCGCTTCCCTGTGTGGGGGCGAGGAGCTCTGGTGGGGCGCGCGACCTAGCGCCACGCACGCGCAAATCCGAGCTGGCGACGTGAGGTAACGCTCCACGTCACCGCACTGTGAAAGGCCTTAGAACAAATTGTGAAGATGCACTGAACATCAAAAGTGTGTAAATAAAATGTTATTTCCATTGAACTTCTAAAAAGTTAAAATATCCCAAACATATCATATGGATCACATATAGGATAGAAAAAAAAACTAATTTAAGTCTTGGGAAGAAGAAATACGAGCT]

[+] EMBL AK059926             [AAATCCTCCTCCCTCATCAGTCGTCACGCCCACCACCCCACCAAATCCTCCCTTCGTCATGCCCGGCGCCGGCTCTCCCCTCCTCCCTTGCCGGCGTCCTCCCCTCCTCCCTCCGCCAGCGCGCTTCAATGAATGCACGGCGGAGTGGCCAGCGAGCTCTCGGCGGCGCGGATGGAGGCTGGGTGTGGCCGACGAGCTCCCCGCAGCAGGCCTCAACGCCGGCGCAGATGGCGATGAGCTCGGGGCGGATCTGGCGGCTTCGACGCCTCCTCACCGGCATGGGCTCGGCCGGCGTCTCCCTCCTCCCTCTGCCGGCATGAGCTCAGCCGGCGTCCCTCTCCTCCCTCCGCCGGCACCAGCTGGCCTCTTCCCCACCTCAGCCACCTCCTCGGGGCCGAGCAGCGCCGGCTCTCCTCTCCTCCCTTCACCGGCGGCGGCGCGGATCTGGGCCCATCCTCCCTCGGCCAACGACGAGCCGCTTGTGGTCGTCGTCTTCCTCGCTTCGTCTCCACTTCCGGCTGGCGACAAGGTTTTGGAGGCGGCGGCGCGGAGCGGAGCACGGGAACGACGACGAGGTCGGCGACGCGGAGCGGGAGGGCGCGAGGTGACAGCGAGTCGGAGGCACGCCCTCCACAATGCAGGTTCCAGCCGTTTCTCCGCCACGCGTGGTCTTGCGCTAGCGAGAAATCGCGCTTCCCTGTGTGGGGGCGAGGAGCTCTGGTGGGGCGCGCGACCTAGCGCCACGCACGCGCAAATCCGAGCTGGCGACGTGAGGTAACGCTCCACGTCACCGCACTGTGAAAGGCCTTAGAACAAATTGTGAAGATGCACTGAACATCAAAAGTGTGTAAATAAAATGTTATTTCCATTGAACTTCTAAAAAGTTAAAATATCCCAAACATATCATATGGATCACATATAGGATAGAAAAAAAAACTAATTTAAGTCTTGGGAAGAAGAAATACGAGCT]
[+] EMBL AK100845             [AAATCCTCCTCCCTCATCAGTCGTCACGCCCACCACCCCACCAAATCCTCCCTTCGTCATGCCCGGCGCCGGCTCTCCCCTCCTCCCTTGCCGGCGTCCTCCCCTCCTCCCTCCGCCAGCGCGCTTCAATGAATGCACGGCGGAGTGGCCAGCGAGCTCTCGGCGGCGCGGATGGAGGCTGGGTGTGGCCGACGAGCTCCCCGCAGCAGGCCTCAACGCCGGCGCAGATGGCGATGAGCTCGGGGCGGATCTGGCGGCTTCGACGCCTCCTCACCGGCATGGGCTCGGCCGGCGTCTCCCTCCTCCCTCTGCCGGCATGAGCTCAGCCGGCGTCCCTCTCCTCCCTCCGCCGGCACCAGCTGGCCTCTTCCCCACCTCAGCCACCTCCTCGGGGCCGAGCAGCGCCGGCTCTCCTCTCCTCCCTTCACCGGCGGCGGCGCGGATCTGGGCCCATCCTCCCTCGGCCAACGACGAGCCGCTTGTGGTCGTCGTCTTCCTCGCTTCGTCTCCACTTCCGGCTGGCGACAAGGTTTTGGAGGCGGCGGCGCGGAGCGGAGCACGGGAACGACGACGAGGTCGGCGACGCGGAGCGGGAGGGCGCGAGGTGACAGCGAGTCGGAGGCACGCCCTCCACAATGCAGGTTCCAGCCGTTTCTCCGCCACGCGTGGTCTTGCGCTAGCGAGAAATCGCGCTTCCCTGTGTGGGGGCGAGGAGCTCTGGTGGGGCGCGCGACCTAGCGCCACGCACGCGCAAATCCGAGCTGGCGACGTGAGGTAACGCTCCACGTCACCGCACTGTGAAAGGCCTTAGAACAAATTGTGAAGATGCACTGAACATCAAAAGTGTGTAAATAAAATGTTATTTCCATTGAACTTCTAAAAAGTT                                                                                    ]




>consensus_1790#0
AAATCCTCCTCCCTCATCAGTCGTCACGCCCACCACCCCACCAAATCCTCCCTTCGTCAT
GCCCGGCGCCGGCTCTCCCCTCCTCCCTTGCCGGCGTCCTCCCCTCCTCCCTCCGCCAGC
GCGCTTCAATGAATGCACGGCGGAGTGGCCAGCGAGCTCTCGGCGGCGCGGATGGAGGCT
GGGTGTGGCCGACGAGCTCCCCGCAGCAGGCCTCAACGCCGGCGCAGATGGCGATGAGCT
CGGGGCGGATCTGGCGGCTTCGACGCCTCCTCACCGGCATGGGCTCGGCCGGCGTCTCCC
TCCTCCCTCTGCCGGCATGAGCTCAGCCGGCGTCCCTCTCCTCCCTCCGCCGGCACCAGC
TGGCCTCTTCCCCACCTCAGCCACCTCCTCGGGGCCGAGCAGCGCCGGCTCTCCTCTCCT
CCCTTCACCGGCGGCGGCGCGGATCTGGGCCCATCCTCCCTCGGCCAACGACGAGCCGCT
TGTGGTCGTCGTCTTCCTCGCTTCGTCTCCACTTCCGGCTGGCGACAAGGTTTTGGAGGC
GGCGGCGCGGAGCGGAGCACGGGAACGACGACGAGGTCGGCGACGCGGAGCGGGAGGGCG
CGAGGTGACAGCGAGTCGGAGGCACGCCCTCCACAATGCAGGTTCCAGCCGTTTCTCCGC
CACGCGTGGTCTTGCGCTAGCGAGAAATCGCGCTTCCCTGTGTGGGGGCGAGGAGCTCTG
GTGGGGCGCGCGACCTAGCGCCACGCACGCGCAAATCCGAGCTGGCGACGTGAGGTAACG
CTCCACGTCACCGCACTGTGAAAGGCCTTAGAACAAATTGTGAAGATGCACTGAACATCA
AAAGTGTGTAAATAAAATGTTATTTCCATTGAACTTCTAAAAAGTTAAAATATCCCAAAC
ATATCATATGGATCACATATAGGATAGAAAAAAAAACTAATTTAAGTCTTGGGAAGAAGA
AATACGAGCT

clustalw multiple alignements is not computed in this case