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Oryza sativa
cluster # 1793 cluster # 1793       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1793#0 length = 1168 sequences # 2  

consensusID : consensus_1793#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1168
fasta sequence
                              [AGCCTCCGAGATAAGCCGCGCCGTCGCCGCCGCAGAAACCGCAAAAGCCATCGCCGCCGCCGCCGCCGCCGTGGCCATGGCAGCAGCATGCTCCTCCGCCGCCTTCCTCGCCTACCCGGGCAGCCTAGGAGCAGGGCCCCGCCCCCTCCGCCTCTTCCGCGCATTCGCGGCGGCCTCCTCCTCCGGGTCGGGGAGCAAGAAGAAGGCGAGGAAGTCCAAGGGCGCTGGGAACAAGGGGGAAGCCAGCGGCGGTGGAGGCGGCAAGGGGAAGGGGAAGGCGCTGGAGCCGCCGCCCGCGGTGATACGCCGCGCGCCGGCTGGGAGCGCGTCGGTGTTCCAGCAGCCGGAGCCGGGGTTCACCCCCGGCGGCGGCGGCGGCGGGAAGGGGCCGACGGAGGAGGAGCGGCGGCAGCGGCAGGCCAACGAGAACGCCTTCCTCCTCGCATGGCTGGGGCTCGGCTTGATCATCCTCGCCGAGGGCCTCGCGCTCGCCGCCTCCGGTTTCCTGCCAGAAGAATGGGACAGCTTTTTCGTGAAGTTCCTTTATCCATCGTTTACTCCTACGGTAATATTGTTTTTGGGCGGTACGGTCGGATATGGCGTCTTCAAGTACTTCGAAGGCGAGAAAAGCAATAGCTAGATGGCTGCACAAAGGTGAGTAAAAGAATGAGGCGGGTTGAAACACGATTAGAGAGTAAATGGTTCATATTTGCCATGGTTAGAGTATTGACTATTACCATCGTAGCTGCACAAGACACCAGTCAGAGGCTTTGCGCAAATTGCAGTGCGACTGTGCAAATTACAAATTGCGCAATCATAAGCAAATGGAAAAAAAAAACTCAAATCTAGAGTTTCCCGACATGATTTCGCAGACCATGCATATCGTGGTCAAGACAAGAGGATCATTGATAAATACAGTTTCTTGAAGCAAGCAGGTGCAGAGAAGTTGTACCCTATTTTATGAGGCATCACACAAATCAGCGGCTGGGGAAGCTACGAGCTCTGGAACTCCCTGTCTGTCATCAGTGTCTAGTTCGTCTCTAGCTAGTTCTCTTGTACTTCTTGACTTGTTATTGTTGTTCAGGTCATCTAACTCCTGGGGTTTGTTCAGCGTGCAAGTCAATAAATTTGTATTGTGCTATTTTGTTAATGAAATGAAACGCGATCG]

[+] EMBL AK105873             [AGCCTCCGAGATAAGCCGCGCCGTCGCCGCCGCAGAAACCGCAAAAGCCATCGCCGCCGCCGCCGCCGCCGTGGCCATGGCAGCAGCATGCTCCTCCGCCGCCTTCCTCGCCTACCCGGGCAGCCTAGGAGCAGGGCCCCGCCCCCTCCGCCTCTTCCGCGCATTCGCGGCGGCCTCCTCCTCCGGGTCGGGGAGCAAGAAGAAGGCGAGGAAGTCCAAGGGCGCTGGGAACAAGGGGGAAGCCAGCGGCGGTGGAGGCGGCAAGGGGAAGGGGAAGGCGCTGGAGCCGCCGCCCGCGGTGATACGCCGCGCGCCGGCTGGGAGCGCGTCGGTGTTCCAGCAGCCGGAGCCGGGGTTCACCCCCGGCGGCGGCGGCGGCGGGAAGGGGCCGACGGAGGAGGAGCGGCGGCAGCGGCAGGCCAACGAGAACGCCTTCCTCCTCGCATGGCTGGGGCTCGGCTTGATCATCCTCGCCGAGGGCCTCGCGCTCGCCGCCTCCGGTTTCCTGCCAGAAGAATGGGACAGCTTTTTCGTGAAGTTCCTTTATCCATCGTTTACTCCTACGGTAATATTGTTTTTGGGCGGTACGGTCGGATATGGCGTCTTCAAGTACTTCGAAGGCGAGAAAAGCAATAGCTAGATGGCTGCACAAAGGTGAGTAAAAGAATGAGGCGGGTTGAAACACGATTAGAGAGTAAATGGTTCATATTTGCCATGGTTAGAGTATTGACTATTACCATCGTAGCTGCACAAGACACCAGTCAGAGGCTTTGCGCAAATTGCAGTGCGACTGTGCAAATTACAAATTGCGCAATCATAAGCAAATGGAAAAAAAAAACTCAAATCTAGAGTTTCCCGACATGATTTCGCAGACCATGCATATCGTGGTCAAGACAAGAGGATCATTGATAAATACAGTTTCTTGAAGCAAGCAGGTGCAGAGAAGTTGTACCCTATTTTATGAGGCATCACACAAATCAGCGGCTGGGGAAGCTACGAGCTCTGGAACTCCCTGTCTGTCATCAGTGTCTAGTTCGTCTCTAGCTAGTTCTCTTGTACTTCTTGACTTGTTATTGTTGTTCAGGTCATCTAACTCCTGGGGTTTGTTCAGCGTGCAAGTCAATAAATTTGTATTGTGCTAT                          ]
[+] EMBL AK062350             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGTTAGAGTATTGACTATTACCATCGTAGCTGCACAAGACACCAGTCAGAGGCTTTGCGCAAATTGCAGTGCGACTGTGCAAATTACAAATTGCGCAATCATAAGCAAATGGAAAAAAAAAACTCAAATCTAGAGTTTCCCGACATGATTTCGCAGACCATGCATATCGTGGTCAAGACAAGAGGATCATTGATAAATTCAGTTTCTTGAAGCAAGCAGGTGCAGAGAAGTTGTACCCTATTTTATGAGGCATCACACAAATCAGCGGCTGGGGAAGCTACGAGCTCTGGAACTCCCTGTCTGTCATCAGTGTCTAGTTCGTCTCTAGCTAGTTCTCTTGTACTTCTTGACTTGTTATTGTTGTTCAGGTCATCTAACTCCTGGGGTTTGTTCAGCGTGCAAGTCAATAAATTTGTATTGTGCTATTTTGTTAATGAAATGAAACGCGATCG]


>consensus_1793#0 AGCCTCCGAGATAAGCCGCGCCGTCGCCGCCGCAGAAACCGCAAAAGCCATCGCCGCCGC CGCCGCCGCCGTGGCCATGGCAGCAGCATGCTCCTCCGCCGCCTTCCTCGCCTACCCGGG CAGCCTAGGAGCAGGGCCCCGCCCCCTCCGCCTCTTCCGCGCATTCGCGGCGGCCTCCTC CTCCGGGTCGGGGAGCAAGAAGAAGGCGAGGAAGTCCAAGGGCGCTGGGAACAAGGGGGA AGCCAGCGGCGGTGGAGGCGGCAAGGGGAAGGGGAAGGCGCTGGAGCCGCCGCCCGCGGT GATACGCCGCGCGCCGGCTGGGAGCGCGTCGGTGTTCCAGCAGCCGGAGCCGGGGTTCAC CCCCGGCGGCGGCGGCGGCGGGAAGGGGCCGACGGAGGAGGAGCGGCGGCAGCGGCAGGC CAACGAGAACGCCTTCCTCCTCGCATGGCTGGGGCTCGGCTTGATCATCCTCGCCGAGGG CCTCGCGCTCGCCGCCTCCGGTTTCCTGCCAGAAGAATGGGACAGCTTTTTCGTGAAGTT CCTTTATCCATCGTTTACTCCTACGGTAATATTGTTTTTGGGCGGTACGGTCGGATATGG CGTCTTCAAGTACTTCGAAGGCGAGAAAAGCAATAGCTAGATGGCTGCACAAAGGTGAGT AAAAGAATGAGGCGGGTTGAAACACGATTAGAGAGTAAATGGTTCATATTTGCCATGGTT AGAGTATTGACTATTACCATCGTAGCTGCACAAGACACCAGTCAGAGGCTTTGCGCAAAT TGCAGTGCGACTGTGCAAATTACAAATTGCGCAATCATAAGCAAATGGAAAAAAAAAACT CAAATCTAGAGTTTCCCGACATGATTTCGCAGACCATGCATATCGTGGTCAAGACAAGAG GATCATTGATAAATACAGTTTCTTGAAGCAAGCAGGTGCAGAGAAGTTGTACCCTATTTT ATGAGGCATCACACAAATCAGCGGCTGGGGAAGCTACGAGCTCTGGAACTCCCTGTCTGT CATCAGTGTCTAGTTCGTCTCTAGCTAGTTCTCTTGTACTTCTTGACTTGTTATTGTTGT TCAGGTCATCTAACTCCTGGGGTTTGTTCAGCGTGCAAGTCAATAAATTTGTATTGTGCT ATTTTGTTAATGAAATGAAACGCGATCG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)