cluster # 1805

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Oryza sativa
cluster # 1805 cluster # 1805 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1805#0 length = 437 sequences # 2

consensusID : consensus_1805#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 437
fasta sequence

                              [CATCGGAGGATGAATCAACTGAGAAATATAGTAGAAGAAAAAAAGATCGCAAACGATCATCAAGAAAATCGAGCAACAATGATGAAGGCTTCGAGGAGTTCCTTGAAGGCATGTTCCCTTGATCTGGCCTTTATGTCAAAATCATCATCAGAAGGGGAAGCGGCACCTGTTTAATCTTCCATGACATGTTAATACTGAACGTGATTAATTGTAACTTTGTATATGATGGTGTATTACTGCTAGTTGTTCCATTTCTAGCCTCTAGGTCTCTTGTGAGTTCTGAGATGTGAGAAC------TGCCAGGTGTTGTCTAACTAATGAATTTGTCACCACCTGCTCTTAATCTGTGATAGCTTGAAGCACCTTGAATGTTATTTATATGTGGATATTGTGTGNTATAAATATGCAAATATCANAGTATTAACTAGTTTTAAAAAAAA]

[+] EMBL CA756597             [CATCGGAGGATGAATCAACTGAGAAATATAGTAGAAGAAAAAAAGATCGCAAACGATCATCAAGAAAATCGAGCAACAATGATGAAGGCTTCGAGGAGTTCCTTGAAGGCATGTTCCCTTGATCTGGCCTTTATGTCAAAATCATCATCAGAAGGGGAAGCGGCACCTGTTTAATCTTCCATGACATGTTAATACTGAACGTGATTAATTGTAACTTTGTATATGATGGTGTATTACTGCTAGTTGTTCCATTTCTAGCCTCTAGGTCTCTTGTGAGTTCTGAGATGTGAGAAC      TGCCAGGTGTTGTCTAACTAATGAATTTGTCACCACCTGCTCTTAATCTGTGATAGCTTGAAGCACCTTGAATGTTATTTATATGTGGATATTGTGTGNTATAAATATGCAAATATCANAGTATTAACTAGTTTTAAAAAAAA]
[+] EMBL CA763883             [                                                                                           CGAGGAGTTCCTTGAAGGCATGTTCCCTTGATCTGGCCTTTATGTCAAAATCATCATCAGAAGGGGAAGCGGCACCTGTTTAATCTTCCATGACATGTTAATACTGAACGTGATTAATTGTAACTTTGTATATGATGGTGTATTACTGCTAGTTGTTCCATTTCTAGCCTCTAGGTCTCTTGTGAGTTCTGAGATGTGAGAACTGCCAGTGCCAGGTGCTGTCTAACTAATGAATTGGTCACCTCCTGCTCTTAATCCGTAATAGTTTGAAGCACCTTGAATGTTATTTATATGTGGATATTGTGT  TATAAATATGCAAATATCAGAGTATTTAC               ]




>consensus_1805#0
CATCGGAGGATGAATCAACTGAGAAATATAGTAGAAGAAAAAAAGATCGCAAACGATCAT
CAAGAAAATCGAGCAACAATGATGAAGGCTTCGAGGAGTTCCTTGAAGGCATGTTCCCTT
GATCTGGCCTTTATGTCAAAATCATCATCAGAAGGGGAAGCGGCACCTGTTTAATCTTCC
ATGACATGTTAATACTGAACGTGATTAATTGTAACTTTGTATATGATGGTGTATTACTGC
TAGTTGTTCCATTTCTAGCCTCTAGGTCTCTTGTGAGTTCTGAGATGTGAGAACTGCCAG
GTGTTGTCTAACTAATGAATTTGTCACCACCTGCTCTTAATCTGTGATAGCTTGAAGCAC
CTTGAATGTTATTTATATGTGGATATTGTGTGNTATAAATATGCAAATATCANAGTATTA
ACTAGTTTTAAAAAAAA

clustalw multiple alignements is not computed in this case