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Oryza sativa
cluster # 1849 cluster # 1849       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1849#0 length = 1436 sequences # 2  

consensusID : consensus_1849#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1436
fasta sequence
                              [TGTGACGCAGCTACAGTCGCCGAGAGCAAGACGAAAGGCAAGCACGCGCACCCACCCACACACGGGCGCGCGCACGTACAAAGCCCCTCGTCTCCGTGTCTTCTTCCTCCCCGCGCCTGCAACAAACCGGCCAGCCCAGCCAGCCGGTCGGCCGCTTCCGCCATCACCTTTGCCATTTTGCTGATCTCGATCTCTTCCTTCCTCAGCCACTAGCTGGCTTACTACCACTCCAAAGGGTGGAAGTGGAAGCTAGGGAGAGCTAGCTAGCTCGTTTTCTTAACTTCTAGCTAGCTGATGATGCCGGCCTGCGGCATGGGGTCGTCGAGACGGCCGAGGAGATGGAGCGGCGGATCCAAACTCGCCGTCGCATGCCTCGCGGCGGTTGCGGTGACCTCCCTGCAGCTGTGCTGCCTCTCCGGCTGCTTCATCGCTGCGTGCGGCGGCGCCGGCAGGGACGACGACGACGTGCGCCGTTACTCCGATCATTTCGGGAGGCTGGAAGGAGCAGGAGCCCATTCCGGCGACCTTCTGGAAGGTGGTGGTCACTACCACGTCGGGTTGGGGCGTCGGCTGCTGTCGGGAGGGCCAGGGTCGCACCCGCCGCGGTGCACGTCCAAGTGCGGCAGCTGCAGCCCGTGCTCCCCCGTGCACGTGTCCGTCCCCCCCGGCGTCCTCGTCACCACCGAGTACTACCCCGAGGCCTGGCGCTGCAAGTGCCGCAACCGCCTCTACATGCCGTGACGACTCCACACCCCCCACCCCTCTACGTACGCCGTCTCGATCCAACCGCACGAGACCACCGAGATGGCGCCGTGACACAACAGGTAGGCGCACCGTCCGCCCGTCGTCTCTGCCGCTGCATCATCGCGTCCGGTGCGGCATGCCTCTCTTTCTCTCTCTTTCTCTCGCCGTCTCGCGCGCGCGCGTGGGGGCATGCGTGCATGGGTGGTGCAGGTGGGGCGCGGGGCGCGTGACGGATGGTGGCGCGGTGGACTGGCCTACCACGCGCGCGCGGTGGCACGGCGCATGCACGGCGGCAGCTGGGGGGGCCGGGGCCTGGGCCAGCGTGATCGTCTCTGAAAACTGTGGCATTGCAGTGTGGCTTTTGGTTGGGCCTACCACGAGGCGATGGCGCAGAGGAGAGATGAGGAGGAAAGCTGCTGCCCCCAGGCGCCTCTTCATGTGATCCCTGCGCACATCATTCTTGGCTACCTAGTGAAAAACTGAAAAACACAGTACCACCACCGGCCGAGTCCCTTTGCCATGTTATACATATATATATCTCCCCTTTTTTTTTTCACTCCTAGTTATCTCCCGGTGCTTTCAGTTCTCGCATCATGCCTGCACGGGGCATGCAACAGATCGATCAAGTGTACATTTCTCATTTGTAACAAGACTCATCGTCGTCTATCAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK106783             [TGTGACGCAGCTACAGTCGCCGAGAGCAAGACGAAAGGCAAGCACGCGCACCCACCCACACACGGGCGCGCGCACGTACAAAGCCCCTCGTCTCCGTGTCTTCTTCCTCCCCGCGCCTGCAACAAACCGGCCAGCCCAGCCAGCCGGTCGGCCGCTTCCGCCATCACCTTTGCCATTTTGCTGATCTCGATCTCTTCCTTCCTCAGCCACTAGCTGGCTTACTACCACTCCAAAGGGTGGAAGTGGAAGCTAGGGAGAGCTAGCTAGCTCGTTTTCTTAACTTCTAGCTAGCTGATGATGCCGGCCTGCGGCATGGGGTCGTCGAGACGGCCGAGGAGATGGAGCGGCGGATCCAAACTCGCCGTCGCATGCCTCGCGGCGGTTGCGGTGACCTCCCTGCAGCTGTGCTGCCTCTCCGGCTGCTTCATCGCTGCGTGCGGCGGCGCCGGCAGGGACGACGACGACGTGCGCCGTTACTCCGATCATTTCGGGAGGCTGGAAGGAGCAGGAGCCCATTCCGGCGACCTTCTGGAAGGTGGTGGTCACTACCACGTCGGGTTGGGGCGTCGGCTGCTGTCGGGAGGGCCAGGGTCGCACCCGCCGCGGTGCACGTCCAAGTGCGGCAGCTGCAGCCCGTGCTCCCCCGTGCACGTGTCCGTCCCCCCCGGCGTCCTCGTCACCACCGAGTACTACCCCGAGGCCTGGCGCTGCAAGTGCCGCAACCGCCTCTACATGCCGTGACGACTCCACACCCCCCACCCCTCTACGTACGCCGTCTCGATCCAACCGCACGAGACCACCGAGATGGCGCCGTGACACAACAGGTAGGCGCACCGTCCGCCCGTCGTCTCTGCCGCTGCATCATCGCGTCCGGTGCGGCATGCCTCTCTTTCTCTCTCTTTCTCTCGCCGTCTCGCGCGCGCGCGTGGGGGCATGCGTGCATGGGTGGTGCAGGTGGGGCGCGGGGCGCGTGACGGATGGTGGCGCGGTGGACTGGCCTACCACGCGCGCGCGGTGGCACGGCGCATGCACGGCGGCAGCTGGGGGGGCCGGGGCCTGGGCCAGCGTGATCGTCTCTGAAAACTGTGGCATTGCAGTGTGGCTTTTGGTTGGGCCTACCACGAGGCGATGGCGCAGAGGAGAGATGAGGAGGAAAGCTGCTGCCCCCAGGCGCCTCTTCATGTGATCCCTGCGCACATCATTCTTGGCTACCTAGTGAAAAACTGAAAAACACAGTACCACCACCGGCCGAGTCCCTTTGCCATGTTATACATATATATATCTCCCCTTTTTTTTTTCACTCCTAGTTATCTCCCGGTGCTTTCAGTTCTCGCATCATGCCTGCACGGGGCATGCAACAGATCGATCAAGTGTACATTTCTCATTTGTAACAAGACTCATC                                  ]
[+] EMBL AU094330             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CACTCCTAGTTATCTCCCGGTGCTTTCAGTTCTCGCATCATGCCTGCACGGGGCATGCAACAGATCGATCAAGTGTACATTTCTCATTTGTAACAAGACTCATCGTCGTCTATCAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_1849#0 TGTGACGCAGCTACAGTCGCCGAGAGCAAGACGAAAGGCAAGCACGCGCACCCACCCACA CACGGGCGCGCGCACGTACAAAGCCCCTCGTCTCCGTGTCTTCTTCCTCCCCGCGCCTGC AACAAACCGGCCAGCCCAGCCAGCCGGTCGGCCGCTTCCGCCATCACCTTTGCCATTTTG CTGATCTCGATCTCTTCCTTCCTCAGCCACTAGCTGGCTTACTACCACTCCAAAGGGTGG AAGTGGAAGCTAGGGAGAGCTAGCTAGCTCGTTTTCTTAACTTCTAGCTAGCTGATGATG CCGGCCTGCGGCATGGGGTCGTCGAGACGGCCGAGGAGATGGAGCGGCGGATCCAAACTC GCCGTCGCATGCCTCGCGGCGGTTGCGGTGACCTCCCTGCAGCTGTGCTGCCTCTCCGGC TGCTTCATCGCTGCGTGCGGCGGCGCCGGCAGGGACGACGACGACGTGCGCCGTTACTCC GATCATTTCGGGAGGCTGGAAGGAGCAGGAGCCCATTCCGGCGACCTTCTGGAAGGTGGT GGTCACTACCACGTCGGGTTGGGGCGTCGGCTGCTGTCGGGAGGGCCAGGGTCGCACCCG CCGCGGTGCACGTCCAAGTGCGGCAGCTGCAGCCCGTGCTCCCCCGTGCACGTGTCCGTC CCCCCCGGCGTCCTCGTCACCACCGAGTACTACCCCGAGGCCTGGCGCTGCAAGTGCCGC AACCGCCTCTACATGCCGTGACGACTCCACACCCCCCACCCCTCTACGTACGCCGTCTCG ATCCAACCGCACGAGACCACCGAGATGGCGCCGTGACACAACAGGTAGGCGCACCGTCCG CCCGTCGTCTCTGCCGCTGCATCATCGCGTCCGGTGCGGCATGCCTCTCTTTCTCTCTCT TTCTCTCGCCGTCTCGCGCGCGCGCGTGGGGGCATGCGTGCATGGGTGGTGCAGGTGGGG CGCGGGGCGCGTGACGGATGGTGGCGCGGTGGACTGGCCTACCACGCGCGCGCGGTGGCA CGGCGCATGCACGGCGGCAGCTGGGGGGGCCGGGGCCTGGGCCAGCGTGATCGTCTCTGA AAACTGTGGCATTGCAGTGTGGCTTTTGGTTGGGCCTACCACGAGGCGATGGCGCAGAGG AGAGATGAGGAGGAAAGCTGCTGCCCCCAGGCGCCTCTTCATGTGATCCCTGCGCACATC ATTCTTGGCTACCTAGTGAAAAACTGAAAAACACAGTACCACCACCGGCCGAGTCCCTTT GCCATGTTATACATATATATATCTCCCCTTTTTTTTTTCACTCCTAGTTATCTCCCGGTG CTTTCAGTTCTCGCATCATGCCTGCACGGGGCATGCAACAGATCGATCAAGTGTACATTT CTCATTTGTAACAAGACTCATCGTCGTCTATCAAAAAAAAAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)