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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1930#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 3414 fasta sequence
[GTGTGGGTGGGTTCCTGGATCCGGCGCAGAGGTGTGCTGGGGCGGCCATCGGCTGGCAGCCGGCTGGATCCAGTGCGGGTGGGGGCTCTGCTCCTACCGACATGCAGCGGCGGCGGCGACCGACGACGGTGGTGTCTCCCCTCTCCCGGCGTTGCCATCGACAGCGAAAGCAGCGATCTCTTAAAATTTGAGAGAGTATTTATCCAAGCTAATAATTCAGTGAATTTACAAATCGAGAGTAATGGCAGAAGCAGTGATACTTTTAGTTGTGAAGAAAATTGGTGCTGCTCTAGGAAATGAAGTAATCAACCAAGCAAGTTCACTGTACAGAAACTTGTTTGCACAGCTTGCAGAACTCCAAGGCAGCATGAGCCGCATATGTCGTGAGCTTAGGTTGATGCATGAATTTCTTTGCAGAATGGACGTACGCAATCGAAATGATCAGGCATATGAAATTTGGGTGGATGAGGTGCGGAAGCTAGCACATGGAATTGAGGACATAGTAGATGAGTATCTACACTTAGTAAGGCAGAGACATGACAAAGGATGGAGCTTTTATCTGAAGAAGGGAATCAATCAACCTGAAGCTTTGCGTTCATTAAACCGGATGGTCTGCCTCATAAAGGAAGCAGAGTCCAGTCTCGTCCACCTATTTCAAGTAAAAGATCGATGGATTCCTAATGCAAGCCCTGGGTATGCCAACAATTCTGGCTATATTGTCGAGAAGTCCCAACATCTAGCAAGTACTTCCCGTTCTATTTGCGAAGATCTCGTGGGAATCGAAGAAAACAGAGATACATTGTTCAATTGGATGAGAGAAGATGGGATGGCATGCTCTACAATAGTTCTTCATGGCATGGGAGGCCTTGGTAAAACAGCTCTAACTGCAAATGTGTACAAGCATGAACAAGAATATTATGACTGTCATGCATGGGTATCTGTTTCACAAACATATTCGCTGATGGAGCTCTTAAAAAAGCTAAGCGTCCAGCTTTTTCATGAGGAAAATATTCAGAGTAATATTGGCAGTATCGACATAATCAATCTTCAGGAGATACTTAGGAGATTCCTTGAAGAGAAGAAATACTTGATAGTGTTGGACGATGTTTGGACACCAGAAGTAATCATCGATATGTCAAGAGCTCTTGCTCAGAATTTTAAGGGAAGTAGATTGCTGATTACTACACGTATTGGTAATGTTGCAGAATTCGCATCGGAAGGACGTGTGCTAACACTAGAGGGTTTGTCAGAAGGAAAGTCTTGGGAACTTTTTTGTAAGAAAGCTTTCCGGAGAGAAGCAAATCACGAATGTCCCACTGAGCTGAAGAATTTGGCGACACAAATGTTGAACAAGTGTAAAGGCTTGCCTCTTGCTATTGTGTCTGTTGGAAGCCTATTGTCCGTGCGTGAGAAGAATCCAACAGAATGGAGACGAATTTATGACCAACTCAGTTGGGAGCTGAATAACAACCCAGGCTTAGACCACGTTAGGAATATTCTGTACTTAAGCTTCATATACCTCCCAACTTATCTGAAGAGTTGTTTCCTGTATTGTACCTTGTTTCCAGAGGACTATATTCTTCATCGGAAGATGCTTTTAAGGTTATGGATTGCAGAGGGGTTCATTGAGGAAAAGGGTGAGAATACATTCGAAGATGTGGCGGAAGGCTATTTAATTGAGCTGGTTCACAGAAATATGCTGCAGCTTATGGAATGCAACTCATTTGGCAGAATAAAATCCTGTAAGATGCATGACATTGTTCGTGAGTTGGCGATTGACCTGTCTCAGAAACAAAGTTTTGGTCTTGCATACTACGAGTATGGAAATCGTTGTAGTACCATGGACACAAGCATACGCCGTCTCGCGGTAGCTAAATGCAGCAATAATATTTTATCAAGTATATGCTTACCTCGTCTTCGATCTTGCATTGTATTTGATAAGGCCATGCCATCCTTGAGAATAATTAAGTCAATATCAGACAAGTCAAAGTACATTGTTGTACTAGAACTACGTGGGCTGGCGATTGAAAAAGTGCCAGATGCTGTTGGATGCCTTTTCAACCTACGCTATTTGGGTTTGCGCCATTCGAAGGTGAAGTTTCTCCCCAAGTCCGTGGAGAGGCTCTCCAACTTATTGACGTTGGATATTTTCAACTCCTACATACAAGAACTGCCTCAAGGAATAGTCAAGCTGAAGAGTCTGAGGCACTTACTTGTTGAGAGAATCAATGATCCGTCATGGAGGGATTTTAGAAGTCGCCACGGTGTTTGCATCCCAAAGGGTCTTTCGAATTTCACAAATCTGCAGACATTACATGCAATTGAAGCACAGGACCGGACTGTTAAAGACTTGGGGGAGTTGACACAGCTAAAAAGCTTAAGGGTGTGGAATGTGAAGGAAATCCACTGTGAACGCCTCTGCGTGTCTATACTTAAGATGAGATTTTTGTACCACATTCATATAGCTGCATGTGACGAGAGTGAGGTTCAACTGAATAAGCTAGATCCCCCACCGCTAAGCCTTCAGAAACTCTGTTTGAGAGGGAGATTGGCAGAGGGGACACTTGAGTCTCCTCTTTTCCAAACTGGTGGACAGAAATTGCGTGGACTTTTTCTTGTTTGGTCTCAGTTGAAACAAGATCCCCTCCCGCCTATCTCTCGATTATGTAATCTGACACAGCTGAATCTTACAAGAGCATATGTTGGGGAACTGTTAATATTCAGGAGCGGTTGGTTTCCCAGTTTGAAGTTTCTGTTACTGCGGGACTTGCCTAATCTACATCGGTTAGAGATTGAGGAAGGTGCCGGGATAGGTATTCGTGTTTTGCAGCTTAGACACCTTGACAAGCTGATGGATATTCCACCTGGCATCGAGTTTCTTCCATCCCTCCAACGTCTATGCTTTGTCCATATCAGTGAAGATTTCCTTGCATTGCTAAATCGGTGTTCTAGGCTCAAGCACATTCAGTGGTGGTATTCAACGCATGATCAGCCTCTGACGAAGAAATCTCAATCTTGATGGCTTGCTAGGGCTGGCAGCCTGTCGAAGGCAATGGAGAAGCAGAGTTCAAACATGTGTGTGATTCCTTGCCTCATTCATCATCCTTGACAATTGTGTATGCACCCAGTATTCCATCAGATAGGGCTAGGGAGCGAAATTGTTTCACGTTTCACTCTCACTTATAAAGTCATATTTGTTGTATGTGTACCTTGATGTGTTTTTCTTTGGTATAATCGGTTACACGACCTTACTGGTGGCCTGTACATTTGTAGTTTACACCAATGTGGCATTTGTAAAATCTTCCAAAAGTTACTGGCATGTTTGACAAGACATATTTCCTTAGGAACTCTGTTAATGTTTTAGTGTAGTCTGTAGAGCCATTTACAGTTTGCGGAGTATTAAAGAGATAAATA]
[+] EMBL AK073424 [GTGTGGGTGGGTTCCTGGATCCGGCGCAGAGGTGTGCTGGGGCGGCCATCGGCTGGCAGCCGGCTGGATCCAGTGCGGGTGGGGGCTCTGCTCCTACCGACATGCAGCGGCGGCGGCGACCGACGACGGTGGTGTCTCCCCTCTCCCGGCGTTGCCATCGACAGCGAAAGCAGCGATCTCTTAAAATTTGAGAGAGTATTTATCCAAGCTAATAATTCAGTGAATTTACAAATCGAGAGTAATGGCAGAAGCAGTGATACTTTTAGTTGTGAAGAAAATTGGTGCTGCTCTAGGAAATGAAGTAATCAACCAAGCAAGTTCACTGTACAGAAACTTGTTTGCACAGCTTGCAGAACTCCAAGGCAGCATGAGCCGCATATGTCGTGAGCTTAGGTTGATGCATGAATTTCTTTGCAGAATGGACGTACGCAATCGAAATGATCAGGCATATGAAATTTGGGTGGATGAGGTGCGGAAGCTAGCACATGGAATTGAGGACATAGTAGATGAGTATCTACACTTAGTAAGGCAGAGACATGACAAAGGATGGAGCTTTTATCTGAAGAAGGGAATCAATCAACCTGAAGCTTTGCGTTCATTAAACCGGATGGTCTGCCTCATAAAGGAAGCAGAGTCCAGTCTCGTCCACCTATTTCAAGTAAAAGATCGATGGATTCCTAATGCAAGCCCTGGGTATGCCAACAATTCTGGCTATATTGTCGAGAAGTCCCAACATCTAGCAAGTACTTCCCGTTCTATTTGCGAAGATCTCGTGGGAATCGAAGAAAACAGAGATACATTGTTCAATTGGATGAGAGAAGATGGGATGGCATGCTCTACAATAGTTCTTCATGGCATGGGAGGCCTTGGTAAAACAGCTCTAACTGCAAATGTGTACAAGCATGAACAAGAATATTATGACTGTCATGCATGGGTATCTGTTTCACAAACATATTCGCTGATGGAGCTCTTAAAAAAGCTAAGCGTCCAGCTTTTTCATGAGGAAAATATTCAGAGTAATATTGGCAGTATCGACATAATCAATCTTCAGGAGATACTTAGGAGATTCCTTGAAGAGAAGAAATACTTGATAGTGTTGGACGATGTTTGGACACCAGAAGTAATCATCGATATGTCAAGAGCTCTTGCTCAGAATTTTAAGGGAAGTAGATTGCTGATTACTACACGTATTGGTAATGTTGCAGAATTCGCATCGGAAGGACGTGTGCTAACACTAGAGGGTTTGTCAGAAGGAAAGTCTTGGGAACTTTTTTGTAAGAAAGCTTTCCGGAGAGAAGCAAATCACGAATGTCCCACTGAGCTGAAGAATTTGGCGACACAAATGTTGAACAAGTGTAAAGGCTTGCCTCTTGCTATTGTGTCTGTTGGAAGCCTATTGTCCGTGCGTGAGAAGAATCCAACAGAATGGAGACGAATTTATGACCAACTCAGTTGGGAGCTGAATAACAACCCAGGCTTAGACCACGTTAGGAATATTCTGTACTTAAGCTTCATATACCTCCCAACTTATCTGAAGAGTTGTTTCCTGTATTGTACCTTGTTTCCAGAGGACTATATTCTTCATCGGAAGATGCTTTTAAGGTTATGGATTGCAGAGGGGTTCATTGAGGAAAAGGGTGAGAATACATTCGAAGATGTGGCGGAAGGCTATTTAATTGAGCTGGTTCACAGAAATATGCTGCAGCTTATGGAATGCAACTCATTTGGCAGAATAAAATCCTGTAAGATGCATGACATTGTTCGTGAGTTGGCGATTGACCTGTCTCAGAAACAAAGTTTTGGTCTTGCATACTACGAGTATGGAAATCGTTGTAGTACCATGGACACAAGCATACGCCGTCTCGCGGTAGCTAAATGCAGCAATAATATTTTATCAAGTATATGCTTACCTCGTCTTCGATCTTGCATTGTATTTGATAAGGCCATGCCATCCTTGAGAATAATTAAGTCAATATCAGACAAGTCAAAGTACATTGTTGTACTAGAACTACGTGGGCTGGCGATTGAAAAAGTGCCAGATGCTGTTGGATGCCTTTTCAACCTACGCTATTTGGGTTTGCGCCATTCGAAGGTGAAGTTTCTCCCCAAGTCCGTGGAGAGGCTCTCCAACTTATTGACGTTGGATATTTTCAACTCCTACATACAAGAACTGCCTCAAGGAATAGTCAAGCTGAAGAGTCTGAGGCACTTACTTGTTGAGAGAATCAATGATCCGTCATGGAGGGATTTTAGAAGTCGCCACGGTGTTTGCATCCCAAAGGGTCTTTCGAATTTCACAAATCTGCAGACATTACATGCAATTGAAGCACAGGACCGGACTGTTAAAGACTTGGGGGAGTTGACACAGCTAAAAAGCTTAAGGGTGTGGAATGTGAAGGAAATCCACTGTGAACGCCTCTGCGTGTCTATACTTAAGATGAGATTTTTGTACCACATTCATATAGCTGCATGTGACGAGAGTGAGGTTCAACTGAATAAGCTAGATCCCCCACCGCTAAGCCTTCAGAAACTCTGTTTGAGAGGGAGATTGGCAGAGGGGACACTTGAGTCTCCTCTTTTCCAAACTGGTGGACAGAAATTGCGTGGACTTTTTCTTGTTTGGTCTCAGTTGAAACAAGATCCCCTCCCGCCTATCTCTCGATTATGTAATCTGACACAGCTGAATCTTACAAGAGCATATGTTGGGGAACTGTTAATATTCAGGAGCGGTTGGTTTCCCAGTTTGAAGTTTCTGTTACTGCGGGACTTGCCTAATCTACATCGGTTAGAGATTGAGGAAGGTGCCGGGATAGGTATTCGTGTTTTGCAGCTTAGACACCTTGACAAGCTGATGGATATTCCACCTGGCATCGAGTTTCTTCCATCCCTCCAACGTCTATGCTTTGTCCATATCAGTGAAGATTTCCTTGCATTGCTAAATCGGTGTTCTAGGCTCAAGCACATTCAGTGGTGGTATTCAACGCATGATCAGCCTCTGACGAAGAAATCTCAATCTTGATGGCTTGCTAGGGCTGGCAGCCTGTCGAAGGCAATGGAGAAGCAGAGTTCAAACATGTGTGTGATTCCTTGCCTCATTCATCATCCTTGACAATTGTGTATGCACCCAGTATTCCATCAGATAGGGCTAGGGAGCGAAATTGTTTCACGTTTCACTCTCACTTATAAAGTCATATTTGTTGTATGTGTACCTTGATGTGTTTTTCTTTGGTATAATCGGTTACACGACCTTACTGGTGGCCTGTACATTTGTAGTTTACACCAATGTGGCATTTGTAAAATCTTCCAAAAGTTACTGGCATGTTTGACAAGACATATTTCCTTAGGAACTCTGTTAATGTTTTAGTGTAGTCTGTAGAGCCATTTACAGTTTGCGGAGTATTAAAGAGATAAATA]
consensusID : consensus_1930#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 3101 fasta sequence
[CGGCCATCGGCTGGCAGCCGGCTGGATCCAGTGCGGGTGGGGGCTCTGCTCCTACCGACATGCAGCGGCGGCGGCGACCGACGACGGTGGTGTCTCCCCTCTCCCGGCGTTGCCATCGACAGCGAAAGCAGCGATCTCTTAAAATTTGAGAGAGTATTTATCCAAGCTAATAATTCAGTGAATTTACAAATCGAGAGTAATGGCAGAAGCAGTGATACTTTTAGTTGTGAAGAAAATTGGTGCTGCTCTAGGAAATGAAGTAATCAACCAAGCAAGTTCACTGTACAGAAACTTGTTTGCACAGCTTGCAGAACTCCAAGGCAGCATGAGCCGCATATGTCGTGAGCTTAGGTTGATGCATGAATTTCTTTGCAGAATGGACGTACGCAATCGAAATGATCAGGCATATGAAATTTGGGTGGATGAGGTGCGGAAGCTAGCACATGGAATTGAGGACATAGTAGATGAGTATCTACACTTAGTAAGGCAGAGACATGACAAAGGATGGAGCTTTTATCTGAAGAAGGGAATCAATCAACCTGAAGCTTTGCGTTCATTAAACCGGATGGTCTGCCTCATAAAGGAAGCAGAGTCCAGTCTCGTCCACCTATTTCAAGTAAAAGATCGATGGATTCCTAATGCAAGCCCTGGGTATGCCAACAATTCTGGCTATATTGTCGAGAAGTCCCAACATCTAGCAAGTACTTCCCGTTCTATTTGCGAAGATCTCGGGGGAATCGAAGAAAACAGAGATACATTGTTCAATTGGATGAGAGAAGATGGGATGGCATGCTCTACAATAGTTCTTCATGGCATGGGAGGCCTTGGTAAAACAGCTCTAACTGCAAATGTGTACAAGCATGAACAAGAATATTATGACTGTCATGCATGGGTATCTGTTTCACAAACATATTCGCTGATGGAGCTCTTAAAAAAGCTAAGCGTCCAGCTTTTTCATGAGGAAAATATTCAGAGTAATATTGGCAGTATCGACATAATCAATCTTCAGGAGATACTTAGGAGATTCCTTGAAGAGAAGAAATACTTGATAGTGTTGGACGATGTTTGGACACCAGAAGTAATCATCGATATGTCAAGAGCTCTTGCTCAGAATTTTAAGGGAAGTAGATTGCTGATTACTACACGTATTGGTAATGTTGCAGAATTCGCATCGGAAGGACGTGTGCTAACACTAGAGGGTTTGTCAGAAGGAAAGTCTTGGGAACTTTTTTGTAAGAAAGCTTTCCGGAGAGAAGCAAATCACGAATGTCCCACTGAGCTGAAGAATTTGGCGACACAAATGTTGAACAAGTGTAAAGGCTTGCCTCTTGCTATTGTGTCTGTTGGAAGCCTATTGTCCGTGCGTGAGAAGAATCCAACAGAATGGAGACGAATTTATGACCAACTCAGTTGGGAGCTGAATAACAACCCAGGCTTAGACCACGTTAGGAATATTCTGTACTTAAGCTTCATATACCTCCCAACTTATCTGAAGAGTTGTTTCCTGTATTGTACCTTGTTTCCAGAGGACTATATTCTTCATCGGAAGATGCTTTTAAGGTTATGGATTGCAGAGGGGTTCATTGAGGAAAAGGGTGAGAATACATTCGAAGATGTGGCGGAAGGCTATTTAATTGAGCTGGTTCACAGAAATATGCTGCAGCTTATGGAATGCAACTCATTTGGCAGAATAAAATCCTGTAAGATGCATGACATTGTTCGTGAGTTGGCGATTGACCTGTCTCAGAAACAAAGTTTTGGTCTTGCATACTACGAGTATGGAAATCGTTGTAGTACCATGGACACAAGCATACGCCGTCTCGCGGTAGCTAAATGCAGCAATAATATTTTATCAAGTATATGCTTACCTCGTCTTCGATCTTGCATTGTATTTGATAAGGCCATGCCATCCTTGAGAATAATTAAGTCAATATCAGACAAGTCAAAGTACATTGTTGTACTAGAACTACGTGGGCTGGCGATTGAAAAAGTGCCAGATGCTGTTGGATGCCTTTTCAACCTACGCTATTTGGGTTTGCGCCATTCGAAGGTGAAGTTTCTCCCCAAGTCCGTGGAGAGGCTCTCCAACTTATTGACGTTGGATATTTTCAACTCCTACATACAAGAACTGCCTCAAGGAATAGTCAAGCTGAAGAGTCTGAGGCACTTACTTGTTGAGAGAATCAATGATCCGTCATGGAGGGATTTTAGAAGTCGCCACGGTGTTTGCATCCCAAAGGGTCTTTCGAATTTCACAAATCTGCAGACATTACATGCAATTGAAGCACAGGACCGGACTGTTAAAGACTTGGGGGAGTTGACACAGCTAAAAAGCTTAAGGGTGTGGAATGTGAAGGAAATCCACTGTGAACGCCTCTGCGTGTCTATACTTAAGATGAGATTTTTGTACCACATTCATATAGCTGCATGTGACGAGAGTGAGGTTCAACTGAATAAGCTAGATCCCCCACCGCTAAGCCTTCAGAAACTCTGTTTGAGAGGGAGATTGGCAGAGGGGACACTTGAGTCTCCTCTTTTCCAAACTGGTGGACAGAAATTGCGTGGACTTTTTCTTGTTTGGTCTCAGTTGAAACAAGATCCCCTCCCGCCTATCTCTCGATTATGTAATCTGACACAGCTGAATCTTACAAGAGCATATGTTGGGGAACTGTTAATATTCAGGAGCGGTTGGTTTCCCAGTTTGAAGTTTCTGTTACTGCGGGACTTGCCTAATCTACATCGGTTAGAGATTGAGGAAGGTGCCGGGATAGGTATTCGTGTTTTGCAGCTTAGACACCTTGACAAGCTGATGGATATTCCACCTGGCATCGAGTTTCTTCCATCCCTCCAACGTCTATGCTTTGTCCATATCAGTGAAGATTTCCTTGCATTGCTAAATCGGTGTTCTAGGCTCAAGCACATTCAGTGGTGGTATTCAACGCATGATCAGCCTCTGACGAAGAAATGTACGTCGCTCAACTAGTAATTCATATATGTTTTGCATTTTCAATATATACATGGTAGAGCATACGAATGATGAATTAAAATTTAATGTTCCTCTGACCTTTTCTTTGCTATATTTGAGCAATCTGATCCAGCAT]
[+] EMBL AK121168 [CGGCCATCGGCTGGCAGCCGGCTGGATCCAGTGCGGGTGGGGGCTCTGCTCCTACCGACATGCAGCGGCGGCGGCGACCGACGACGGTGGTGTCTCCCCTCTCCCGGCGTTGCCATCGACAGCGAAAGCAGCGATCTCTTAAAATTTGAGAGAGTATTTATCCAAGCTAATAATTCAGTGAATTTACAAATCGAGAGTAATGGCAGAAGCAGTGATACTTTTAGTTGTGAAGAAAATTGGTGCTGCTCTAGGAAATGAAGTAATCAACCAAGCAAGTTCACTGTACAGAAACTTGTTTGCACAGCTTGCAGAACTCCAAGGCAGCATGAGCCGCATATGTCGTGAGCTTAGGTTGATGCATGAATTTCTTTGCAGAATGGACGTACGCAATCGAAATGATCAGGCATATGAAATTTGGGTGGATGAGGTGCGGAAGCTAGCACATGGAATTGAGGACATAGTAGATGAGTATCTACACTTAGTAAGGCAGAGACATGACAAAGGATGGAGCTTTTATCTGAAGAAGGGAATCAATCAACCTGAAGCTTTGCGTTCATTAAACCGGATGGTCTGCCTCATAAAGGAAGCAGAGTCCAGTCTCGTCCACCTATTTCAAGTAAAAGATCGATGGATTCCTAATGCAAGCCCTGGGTATGCCAACAATTCTGGCTATATTGTCGAGAAGTCCCAACATCTAGCAAGTACTTCCCGTTCTATTTGCGAAGATCTCGGGGGAATCGAAGAAAACAGAGATACATTGTTCAATTGGATGAGAGAAGATGGGATGGCATGCTCTACAATAGTTCTTCATGGCATGGGAGGCCTTGGTAAAACAGCTCTAACTGCAAATGTGTACAAGCATGAACAAGAATATTATGACTGTCATGCATGGGTATCTGTTTCACAAACATATTCGCTGATGGAGCTCTTAAAAAAGCTAAGCGTCCAGCTTTTTCATGAGGAAAATATTCAGAGTAATATTGGCAGTATCGACATAATCAATCTTCAGGAGATACTTAGGAGATTCCTTGAAGAGAAGAAATACTTGATAGTGTTGGACGATGTTTGGACACCAGAAGTAATCATCGATATGTCAAGAGCTCTTGCTCAGAATTTTAAGGGAAGTAGATTGCTGATTACTACACGTATTGGTAATGTTGCAGAATTCGCATCGGAAGGACGTGTGCTAACACTAGAGGGTTTGTCAGAAGGAAAGTCTTGGGAACTTTTTTGTAAGAAAGCTTTCCGGAGAGAAGCAAATCACGAATGTCCCACTGAGCTGAAGAATTTGGCGACACAAATGTTGAACAAGTGTAAAGGCTTGCCTCTTGCTATTGTGTCTGTTGGAAGCCTATTGTCCGTGCGTGAGAAGAATCCAACAGAATGGAGACGAATTTATGACCAACTCAGTTGGGAGCTGAATAACAACCCAGGCTTAGACCACGTTAGGAATATTCTGTACTTAAGCTTCATATACCTCCCAACTTATCTGAAGAGTTGTTTCCTGTATTGTACCTTGTTTCCAGAGGACTATATTCTTCATCGGAAGATGCTTTTAAGGTTATGGATTGCAGAGGGGTTCATTGAGGAAAAGGGTGAGAATACATTCGAAGATGTGGCGGAAGGCTATTTAATTGAGCTGGTTCACAGAAATATGCTGCAGCTTATGGAATGCAACTCATTTGGCAGAATAAAATCCTGTAAGATGCATGACATTGTTCGTGAGTTGGCGATTGACCTGTCTCAGAAACAAAGTTTTGGTCTTGCATACTACGAGTATGGAAATCGTTGTAGTACCATGGACACAAGCATACGCCGTCTCGCGGTAGCTAAATGCAGCAATAATATTTTATCAAGTATATGCTTACCTCGTCTTCGATCTTGCATTGTATTTGATAAGGCCATGCCATCCTTGAGAATAATTAAGTCAATATCAGACAAGTCAAAGTACATTGTTGTACTAGAACTACGTGGGCTGGCGATTGAAAAAGTGCCAGATGCTGTTGGATGCCTTTTCAACCTACGCTATTTGGGTTTGCGCCATTCGAAGGTGAAGTTTCTCCCCAAGTCCGTGGAGAGGCTCTCCAACTTATTGACGTTGGATATTTTCAACTCCTACATACAAGAACTGCCTCAAGGAATAGTCAAGCTGAAGAGTCTGAGGCACTTACTTGTTGAGAGAATCAATGATCCGTCATGGAGGGATTTTAGAAGTCGCCACGGTGTTTGCATCCCAAAGGGTCTTTCGAATTTCACAAATCTGCAGACATTACATGCAATTGAAGCACAGGACCGGACTGTTAAAGACTTGGGGGAGTTGACACAGCTAAAAAGCTTAAGGGTGTGGAATGTGAAGGAAATCCACTGTGAACGCCTCTGCGTGTCTATACTTAAGATGAGATTTTTGTACCACATTCATATAGCTGCATGTGACGAGAGTGAGGTTCAACTGAATAAGCTAGATCCCCCACCGCTAAGCCTTCAGAAACTCTGTTTGAGAGGGAGATTGGCAGAGGGGACACTTGAGTCTCCTCTTTTCCAAACTGGTGGACAGAAATTGCGTGGACTTTTTCTTGTTTGGTCTCAGTTGAAACAAGATCCCCTCCCGCCTATCTCTCGATTATGTAATCTGACACAGCTGAATCTTACAAGAGCATATGTTGGGGAACTGTTAATATTCAGGAGCGGTTGGTTTCCCAGTTTGAAGTTTCTGTTACTGCGGGACTTGCCTAATCTACATCGGTTAGAGATTGAGGAAGGTGCCGGGATAGGTATTCGTGTTTTGCAGCTTAGACACCTTGACAAGCTGATGGATATTCCACCTGGCATCGAGTTTCTTCCATCCCTCCAACGTCTATGCTTTGTCCATATCAGTGAAGATTTCCTTGCATTGCTAAATCGGTGTTCTAGGCTCAAGCACATTCAGTGGTGGTATTCAACGCATGATCAGCCTCTGACGAAGAAATGTACGTCGCTCAACTAGTAATTCATATATGTTTTGCATTTTCAATATATACATGGTAGAGCATACGAATGATGAATTAAAATTTAATGTTCCTCTGACCTTTTCTTTGCTATATTTGAGCAATCTGATCCAGCAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1930#0 GTGTGGGTGGGTTCCTGGATCCGGCGCAGAGGTGTGCTGGGGCGGCCATCGGCTGGCAGC 60
consensus_1930#1 ------------------------------------------CGGCCATCGGCTGGCAGC 18
******************
consensus_1930#0 CGGCTGGATCCAGTGCGGGTGGGGGCTCTGCTCCTACCGACATGCAGCGGCGGCGGCGAC 120
consensus_1930#1 CGGCTGGATCCAGTGCGGGTGGGGGCTCTGCTCCTACCGACATGCAGCGGCGGCGGCGAC 78
************************************************************
consensus_1930#0 CGACGACGGTGGTGTCTCCCCTCTCCCGGCGTTGCCATCGACAGCGAAAGCAGCGATCTC 180
consensus_1930#1 CGACGACGGTGGTGTCTCCCCTCTCCCGGCGTTGCCATCGACAGCGAAAGCAGCGATCTC 138
************************************************************
consensus_1930#0 TTAAAATTTGAGAGAGTATTTATCCAAGCTAATAATTCAGTGAATTTACAAATCGAGAGT 240
consensus_1930#1 TTAAAATTTGAGAGAGTATTTATCCAAGCTAATAATTCAGTGAATTTACAAATCGAGAGT 198
************************************************************
consensus_1930#0 AATGGCAGAAGCAGTGATACTTTTAGTTGTGAAGAAAATTGGTGCTGCTCTAGGAAATGA 300
consensus_1930#1 AATGGCAGAAGCAGTGATACTTTTAGTTGTGAAGAAAATTGGTGCTGCTCTAGGAAATGA 258
************************************************************
consensus_1930#0 AGTAATCAACCAAGCAAGTTCACTGTACAGAAACTTGTTTGCACAGCTTGCAGAACTCCA 360
consensus_1930#1 AGTAATCAACCAAGCAAGTTCACTGTACAGAAACTTGTTTGCACAGCTTGCAGAACTCCA 318
************************************************************
consensus_1930#0 AGGCAGCATGAGCCGCATATGTCGTGAGCTTAGGTTGATGCATGAATTTCTTTGCAGAAT 420
consensus_1930#1 AGGCAGCATGAGCCGCATATGTCGTGAGCTTAGGTTGATGCATGAATTTCTTTGCAGAAT 378
************************************************************
consensus_1930#0 GGACGTACGCAATCGAAATGATCAGGCATATGAAATTTGGGTGGATGAGGTGCGGAAGCT 480
consensus_1930#1 GGACGTACGCAATCGAAATGATCAGGCATATGAAATTTGGGTGGATGAGGTGCGGAAGCT 438
************************************************************
consensus_1930#0 AGCACATGGAATTGAGGACATAGTAGATGAGTATCTACACTTAGTAAGGCAGAGACATGA 540
consensus_1930#1 AGCACATGGAATTGAGGACATAGTAGATGAGTATCTACACTTAGTAAGGCAGAGACATGA 498
************************************************************
consensus_1930#0 CAAAGGATGGAGCTTTTATCTGAAGAAGGGAATCAATCAACCTGAAGCTTTGCGTTCATT 600
consensus_1930#1 CAAAGGATGGAGCTTTTATCTGAAGAAGGGAATCAATCAACCTGAAGCTTTGCGTTCATT 558
************************************************************
consensus_1930#0 AAACCGGATGGTCTGCCTCATAAAGGAAGCAGAGTCCAGTCTCGTCCACCTATTTCAAGT 660
consensus_1930#1 AAACCGGATGGTCTGCCTCATAAAGGAAGCAGAGTCCAGTCTCGTCCACCTATTTCAAGT 618
************************************************************
consensus_1930#0 AAAAGATCGATGGATTCCTAATGCAAGCCCTGGGTATGCCAACAATTCTGGCTATATTGT 720
consensus_1930#1 AAAAGATCGATGGATTCCTAATGCAAGCCCTGGGTATGCCAACAATTCTGGCTATATTGT 678
************************************************************
consensus_1930#0 CGAGAAGTCCCAACATCTAGCAAGTACTTCCCGTTCTATTTGCGAAGATCTCGTGGGAAT 780
consensus_1930#1 CGAGAAGTCCCAACATCTAGCAAGTACTTCCCGTTCTATTTGCGAAGATCTCGGGGGAAT 738
***************************************************** ******
consensus_1930#0 CGAAGAAAACAGAGATACATTGTTCAATTGGATGAGAGAAGATGGGATGGCATGCTCTAC 840
consensus_1930#1 CGAAGAAAACAGAGATACATTGTTCAATTGGATGAGAGAAGATGGGATGGCATGCTCTAC 798
************************************************************
consensus_1930#0 AATAGTTCTTCATGGCATGGGAGGCCTTGGTAAAACAGCTCTAACTGCAAATGTGTACAA 900
consensus_1930#1 AATAGTTCTTCATGGCATGGGAGGCCTTGGTAAAACAGCTCTAACTGCAAATGTGTACAA 858
************************************************************
consensus_1930#0 GCATGAACAAGAATATTATGACTGTCATGCATGGGTATCTGTTTCACAAACATATTCGCT 960
consensus_1930#1 GCATGAACAAGAATATTATGACTGTCATGCATGGGTATCTGTTTCACAAACATATTCGCT 918
************************************************************
consensus_1930#0 GATGGAGCTCTTAAAAAAGCTAAGCGTCCAGCTTTTTCATGAGGAAAATATTCAGAGTAA 1020
consensus_1930#1 GATGGAGCTCTTAAAAAAGCTAAGCGTCCAGCTTTTTCATGAGGAAAATATTCAGAGTAA 978
************************************************************
consensus_1930#0 TATTGGCAGTATCGACATAATCAATCTTCAGGAGATACTTAGGAGATTCCTTGAAGAGAA 1080
consensus_1930#1 TATTGGCAGTATCGACATAATCAATCTTCAGGAGATACTTAGGAGATTCCTTGAAGAGAA 1038
************************************************************
consensus_1930#0 GAAATACTTGATAGTGTTGGACGATGTTTGGACACCAGAAGTAATCATCGATATGTCAAG 1140
consensus_1930#1 GAAATACTTGATAGTGTTGGACGATGTTTGGACACCAGAAGTAATCATCGATATGTCAAG 1098
************************************************************
consensus_1930#0 AGCTCTTGCTCAGAATTTTAAGGGAAGTAGATTGCTGATTACTACACGTATTGGTAATGT 1200
consensus_1930#1 AGCTCTTGCTCAGAATTTTAAGGGAAGTAGATTGCTGATTACTACACGTATTGGTAATGT 1158
************************************************************
consensus_1930#0 TGCAGAATTCGCATCGGAAGGACGTGTGCTAACACTAGAGGGTTTGTCAGAAGGAAAGTC 1260
consensus_1930#1 TGCAGAATTCGCATCGGAAGGACGTGTGCTAACACTAGAGGGTTTGTCAGAAGGAAAGTC 1218
************************************************************
consensus_1930#0 TTGGGAACTTTTTTGTAAGAAAGCTTTCCGGAGAGAAGCAAATCACGAATGTCCCACTGA 1320
consensus_1930#1 TTGGGAACTTTTTTGTAAGAAAGCTTTCCGGAGAGAAGCAAATCACGAATGTCCCACTGA 1278
************************************************************
consensus_1930#0 GCTGAAGAATTTGGCGACACAAATGTTGAACAAGTGTAAAGGCTTGCCTCTTGCTATTGT 1380
consensus_1930#1 GCTGAAGAATTTGGCGACACAAATGTTGAACAAGTGTAAAGGCTTGCCTCTTGCTATTGT 1338
************************************************************
consensus_1930#0 GTCTGTTGGAAGCCTATTGTCCGTGCGTGAGAAGAATCCAACAGAATGGAGACGAATTTA 1440
consensus_1930#1 GTCTGTTGGAAGCCTATTGTCCGTGCGTGAGAAGAATCCAACAGAATGGAGACGAATTTA 1398
************************************************************
consensus_1930#0 TGACCAACTCAGTTGGGAGCTGAATAACAACCCAGGCTTAGACCACGTTAGGAATATTCT 1500
consensus_1930#1 TGACCAACTCAGTTGGGAGCTGAATAACAACCCAGGCTTAGACCACGTTAGGAATATTCT 1458
************************************************************
consensus_1930#0 GTACTTAAGCTTCATATACCTCCCAACTTATCTGAAGAGTTGTTTCCTGTATTGTACCTT 1560
consensus_1930#1 GTACTTAAGCTTCATATACCTCCCAACTTATCTGAAGAGTTGTTTCCTGTATTGTACCTT 1518
************************************************************
consensus_1930#0 GTTTCCAGAGGACTATATTCTTCATCGGAAGATGCTTTTAAGGTTATGGATTGCAGAGGG 1620
consensus_1930#1 GTTTCCAGAGGACTATATTCTTCATCGGAAGATGCTTTTAAGGTTATGGATTGCAGAGGG 1578
************************************************************
consensus_1930#0 GTTCATTGAGGAAAAGGGTGAGAATACATTCGAAGATGTGGCGGAAGGCTATTTAATTGA 1680
consensus_1930#1 GTTCATTGAGGAAAAGGGTGAGAATACATTCGAAGATGTGGCGGAAGGCTATTTAATTGA 1638
************************************************************
consensus_1930#0 GCTGGTTCACAGAAATATGCTGCAGCTTATGGAATGCAACTCATTTGGCAGAATAAAATC 1740
consensus_1930#1 GCTGGTTCACAGAAATATGCTGCAGCTTATGGAATGCAACTCATTTGGCAGAATAAAATC 1698
************************************************************
consensus_1930#0 CTGTAAGATGCATGACATTGTTCGTGAGTTGGCGATTGACCTGTCTCAGAAACAAAGTTT 1800
consensus_1930#1 CTGTAAGATGCATGACATTGTTCGTGAGTTGGCGATTGACCTGTCTCAGAAACAAAGTTT 1758
************************************************************
consensus_1930#0 TGGTCTTGCATACTACGAGTATGGAAATCGTTGTAGTACCATGGACACAAGCATACGCCG 1860
consensus_1930#1 TGGTCTTGCATACTACGAGTATGGAAATCGTTGTAGTACCATGGACACAAGCATACGCCG 1818
************************************************************
consensus_1930#0 TCTCGCGGTAGCTAAATGCAGCAATAATATTTTATCAAGTATATGCTTACCTCGTCTTCG 1920
consensus_1930#1 TCTCGCGGTAGCTAAATGCAGCAATAATATTTTATCAAGTATATGCTTACCTCGTCTTCG 1878
************************************************************
consensus_1930#0 ATCTTGCATTGTATTTGATAAGGCCATGCCATCCTTGAGAATAATTAAGTCAATATCAGA 1980
consensus_1930#1 ATCTTGCATTGTATTTGATAAGGCCATGCCATCCTTGAGAATAATTAAGTCAATATCAGA 1938
************************************************************
consensus_1930#0 CAAGTCAAAGTACATTGTTGTACTAGAACTACGTGGGCTGGCGATTGAAAAAGTGCCAGA 2040
consensus_1930#1 CAAGTCAAAGTACATTGTTGTACTAGAACTACGTGGGCTGGCGATTGAAAAAGTGCCAGA 1998
************************************************************
consensus_1930#0 TGCTGTTGGATGCCTTTTCAACCTACGCTATTTGGGTTTGCGCCATTCGAAGGTGAAGTT 2100
consensus_1930#1 TGCTGTTGGATGCCTTTTCAACCTACGCTATTTGGGTTTGCGCCATTCGAAGGTGAAGTT 2058
************************************************************
consensus_1930#0 TCTCCCCAAGTCCGTGGAGAGGCTCTCCAACTTATTGACGTTGGATATTTTCAACTCCTA 2160
consensus_1930#1 TCTCCCCAAGTCCGTGGAGAGGCTCTCCAACTTATTGACGTTGGATATTTTCAACTCCTA 2118
************************************************************
consensus_1930#0 CATACAAGAACTGCCTCAAGGAATAGTCAAGCTGAAGAGTCTGAGGCACTTACTTGTTGA 2220
consensus_1930#1 CATACAAGAACTGCCTCAAGGAATAGTCAAGCTGAAGAGTCTGAGGCACTTACTTGTTGA 2178
************************************************************
consensus_1930#0 GAGAATCAATGATCCGTCATGGAGGGATTTTAGAAGTCGCCACGGTGTTTGCATCCCAAA 2280
consensus_1930#1 GAGAATCAATGATCCGTCATGGAGGGATTTTAGAAGTCGCCACGGTGTTTGCATCCCAAA 2238
************************************************************
consensus_1930#0 GGGTCTTTCGAATTTCACAAATCTGCAGACATTACATGCAATTGAAGCACAGGACCGGAC 2340
consensus_1930#1 GGGTCTTTCGAATTTCACAAATCTGCAGACATTACATGCAATTGAAGCACAGGACCGGAC 2298
************************************************************
consensus_1930#0 TGTTAAAGACTTGGGGGAGTTGACACAGCTAAAAAGCTTAAGGGTGTGGAATGTGAAGGA 2400
consensus_1930#1 TGTTAAAGACTTGGGGGAGTTGACACAGCTAAAAAGCTTAAGGGTGTGGAATGTGAAGGA 2358
************************************************************
consensus_1930#0 AATCCACTGTGAACGCCTCTGCGTGTCTATACTTAAGATGAGATTTTTGTACCACATTCA 2460
consensus_1930#1 AATCCACTGTGAACGCCTCTGCGTGTCTATACTTAAGATGAGATTTTTGTACCACATTCA 2418
************************************************************
consensus_1930#0 TATAGCTGCATGTGACGAGAGTGAGGTTCAACTGAATAAGCTAGATCCCCCACCGCTAAG 2520
consensus_1930#1 TATAGCTGCATGTGACGAGAGTGAGGTTCAACTGAATAAGCTAGATCCCCCACCGCTAAG 2478
************************************************************
consensus_1930#0 CCTTCAGAAACTCTGTTTGAGAGGGAGATTGGCAGAGGGGACACTTGAGTCTCCTCTTTT 2580
consensus_1930#1 CCTTCAGAAACTCTGTTTGAGAGGGAGATTGGCAGAGGGGACACTTGAGTCTCCTCTTTT 2538
************************************************************
consensus_1930#0 CCAAACTGGTGGACAGAAATTGCGTGGACTTTTTCTTGTTTGGTCTCAGTTGAAACAAGA 2640
consensus_1930#1 CCAAACTGGTGGACAGAAATTGCGTGGACTTTTTCTTGTTTGGTCTCAGTTGAAACAAGA 2598
************************************************************
consensus_1930#0 TCCCCTCCCGCCTATCTCTCGATTATGTAATCTGACACAGCTGAATCTTACAAGAGCATA 2700
consensus_1930#1 TCCCCTCCCGCCTATCTCTCGATTATGTAATCTGACACAGCTGAATCTTACAAGAGCATA 2658
************************************************************
consensus_1930#0 TGTTGGGGAACTGTTAATATTCAGGAGCGGTTGGTTTCCCAGTTTGAAGTTTCTGTTACT 2760
consensus_1930#1 TGTTGGGGAACTGTTAATATTCAGGAGCGGTTGGTTTCCCAGTTTGAAGTTTCTGTTACT 2718
************************************************************
consensus_1930#0 GCGGGACTTGCCTAATCTACATCGGTTAGAGATTGAGGAAGGTGCCGGGATAGGTATTCG 2820
consensus_1930#1 GCGGGACTTGCCTAATCTACATCGGTTAGAGATTGAGGAAGGTGCCGGGATAGGTATTCG 2778
************************************************************
consensus_1930#0 TGTTTTGCAGCTTAGACACCTTGACAAGCTGATGGATATTCCACCTGGCATCGAGTTTCT 2880
consensus_1930#1 TGTTTTGCAGCTTAGACACCTTGACAAGCTGATGGATATTCCACCTGGCATCGAGTTTCT 2838
************************************************************
consensus_1930#0 TCCATCCCTCCAACGTCTATGCTTTGTCCATATCAGTGAAGATTTCCTTGCATTGCTAAA 2940
consensus_1930#1 TCCATCCCTCCAACGTCTATGCTTTGTCCATATCAGTGAAGATTTCCTTGCATTGCTAAA 2898
************************************************************
consensus_1930#0 TCGGTGTTCTAGGCTCAAGCACATTCAGTGGTGGTATTCAACGCATGATCAGCCTCTGAC 3000
consensus_1930#1 TCGGTGTTCTAGGCTCAAGCACATTCAGTGGTGGTATTCAACGCATGATCAGCCTCTGAC 2958
************************************************************
consensus_1930#0 GAAGAAATCTCAATCTTGATGGCTTGCTAGGGCTGGCA-GCCTGTCGAAGGCAATGGAGA 3059
consensus_1930#1 GAAGAAATGT--ACGTCGCTCAACTAGTAATTCATATATGTTTTGCATTTTCAATATATA 3016
******** * * * * * * ** * * * * * **** * *
consensus_1930#0 AGCAGAGTTCAAACATGTGTGTGATTCCTTGCCTCATTCATCATCCTTGACAATTGTGTA 3119
consensus_1930#1 CATGG---TAGAGCATACGAATGATGAATTAAAAT-TTAATGTTCCTCTGACCTTTTCTT 3072
* * * *** * **** ** ** ** **** ** * *
consensus_1930#0 TGCACCCAGTATTCCATCAGATAGGGCTAGGGAGCGAAATTGTTTCACGTTTCACTCTCA 3179
consensus_1930#1 TG----CTATATTTGAGCAATCTGATCCAGCAT--------------------------- 3101
** * **** * ** * * **
consensus_1930#0 CTTATAAAGTCATATTTGTTGTATGTGTACCTTGATGTGTTTTTCTTTGGTATAATCGGT 3239
consensus_1930#1 ------------------------------------------------------------
consensus_1930#0 TACACGACCTTACTGGTGGCCTGTACATTTGTAGTTTACACCAATGTGGCATTTGTAAAA 3299
consensus_1930#1 ------------------------------------------------------------
consensus_1930#0 TCTTCCAAAAGTTACTGGCATGTTTGACAAGACATATTTCCTTAGGAACTCTGTTAATGT 3359
consensus_1930#1 ------------------------------------------------------------
consensus_1930#0 TTTAGTGTAGTCTGTAGAGCCATTTACAGTTTGCGGAGTATTAAAGAGATAAATA 3414
consensus_1930#1 -------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||