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Oryza sativa
cluster # 1933 cluster # 1933       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1933#0 length = 2880 sequences # 1  
 consensus_1933#1 length = 1095 sequences # 1  
consensusID : consensus_1933#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2880
fasta sequence 
                              [CTCTTTCTGACTCAGCGCTCGCCCCCTCCTTCCCCCATCTTGCGGCGAGCAGTCGCCCCGACTCCTCCACCAAACCCAAATCGCCACCGCCAGGGACACTGACGCCTGCCTCCCCCACCGAACTGCACCTCCGGGACACTGACGCCCGCCTCGCCGATCCCCTCACATCCTCTGCCGCTCCCCTCGCCCCCTTCCGCGTCGTCTGCACCGCCCACGATCTCCGCCTCGACGACCGGTTCCACAACGCCATTCCTCACGATCCCCTCCCGTCCTCCTCGATTGGCGTCGCCCCCGATCTCTCCTCGACCGCCTCCACGCAACCACCACCACCAATCTCCGCCGAGCACTGTTCTCCACCGGATCCCTCTCCACCGAGCCGCCGTCGGGTCGTCGGCAATCCCTCGACCTCCTCCGGGCTGCCACCGAGTCGGGATCCGGGAACGCGGCCGGATCAGCGTCAACCGCCTGGCCGCTCCTCCACTCCGCCACCACCGAGGGACATCTCCATCTACAAAAGGTAAAGAAAAATTCGCTACTGATTGAATGAACTCATTAGATAGTATACATTTAGTGTTTGCCATTTGCGGAAAGAATGGTTTTCAACAATTGTTGTATCAAGCATACATGTACTAAAAATGCATATGGTTTTAGTAAGCAGGAAATATACATTTATATGGTATTTGGAATGAGTATAGTAAGCAGCTTCTCAAGGAGAAAGCAAAGATTCAGGATGACGTTGTTTTGTATGATTCTTGGATAACATTATGTGTAATTATTTGCAGGATGTTGATGAAGGAAGAGAATTGCAACAGTTTTATGAAAAAAAAAAGTTGGATCAGATTATTGTGATGACCTTCACTGTGTTGTCTTCTGTCCTTCAGTTCTTCAGTTACCTTGCCTGCTAATGAGTTCTTTAAATTATTTTTAAGAGGCAAGGCACTATAGAATATTTGATGCTTGATGCTAATGAGTTTGGGCACTTTTCAGAACTGAAGGGCACTATAGAATATGCTCTATAAAGAATTTTGCAGGTTCTGTTATATGCATCACATATCGATTTGCACAACTTTTTTGGTTGTAGCTGCCAGAATGAAAAATTCCTGAACGCATGGCCGAAAATGAGTACATCTTTTGCAAGTATTGATTTGTGCACATCAGCTAGCTGCCAGAGCATGAAAAATTCCTCATTATGATACTGTTTGTTCACCTATTTAGCTTTAGCTATTGATGCGAGCCAGAAAAATTATACACCTGAAGACATTACCCTCTTGTAAATTTTATGTTATATATACCAACCTGTAGTAAACAACCATTAAATTTATAAGATTTATACTGAAAAAAGGAATACATTTTAAAAAATGTCTGACCATAAAAAAACTTATAAATACAAAATTTTGATAAAAAATGAAGTGTCTTAACATGAATATTAAAATATAATTTTCCAGAGTTACATGCCCTAAGGCATGACGGAAATTGTGTTGGATCGTGGCAATTTTCAGGAGAAAAATGGAACACATTTAAAATAATGCCTGGCCATAAAAAAACTTTTAAATAAAATACAAACTTTTGATGAAACATGGAGTGTCTTAACATGAAAATTAAAAATAGAATTTTCAAGAGTTACATGTACTAAGGCGTGATGGAATATGATGGGATGCCACTACTTAGAAGCTACGAAATCACTTTATAGCATGGCAAATTTATAGTCAAAATCTTCTCAGTTTTGTTATACTTTTAATTTAAAGCATGGCATTGATCACTAGCATTTGTTTGCAGCCGTCCTCTCTTCCCAGCTGACCCAGATGATCGCCAGCTCTATCCTGTCGGCTTCGTCTTACTGGATGTCATCGACCCTACCACCTACTGCCTCTAAGCCTGTCAGTTCCATCAAGGTTTTCTTTTTCTCCTCTTCCTATTCTCTATTTGTGTGATGGAATAGGACGAAGAGGTTCAGTAAAGGGGTCATTTTCTATGCCCGCGCTGTCGAGAGCTGTGACGCTTGAAGTGGCGGGGTGATGCTTGTTGCTTCTTGAACTCTCGCTATGTGTGCAAAAAGAGGAACAGTCTGTGCTCTTCCTGCATCATAGGTATAGCATACAATCTGAATTTTGATGTTTTGCATAAGAACTTTTTTCATTATTGCCTGAAGATGACCATTTGCTCATCACCCACATCCAGTCACCGGTGCCTCCCTGTTATGTCTCTAAATAGGCACATTGTTTGACGATGCATGATAGACCACAAATGGATAAGTCCTGATATGTCTCTAAAGATGCACATTGTTTGACGATGCATGATAGACCACAAATGGATAAGTTTAGGGAGGTAAAAAGGACCAATAAAGGAATAGTCCAGTTGTAAATCTTAATGCAACGCTCAATCTGTTGATAACTACTGTGAGATTACTGATGTTGTTACTTAAATGTAAAATATGTAGCTTACATAGTTTTTTTTGGCATATAGAATATATTAGCCCATGTCATATCTCTTCATAGCTTTTTTTAAGTTTTAGTTTCAACTAAGACAATAACTTTTGATCTTCTGTAAGGTTGGATAGCATAATAGGTTTATTTAGTCTTTATGCAGACATTCTCTTATTTGGATAGCTTGCTGTAGGAGACGGCGCAAGGTGATTGTGGAGGCATGGTGGACAATGGAAGCATTGAGACGTGCTAGAAGGCGTGATATGCAAAATTGTTGTGTATCATGCATGGATGTTTCAGGAACATTGGGTTAATTGTGTTGAGTATATAGTATTGAGATACTGATTAACTAAAATTGTCTAGGGGTGTTTATGGTTATGATCATAGTCATATTTACTGATTGATGGTAATGTTTTATTCTCTGAATTTTTCTATGGAGTACATCAAAATAGATGGT]

[+] EMBL AK121187             [CTCTTTCTGACTCAGCGCTCGCCCCCTCCTTCCCCCATCTTGCGGCGAGCAGTCGCCCCGACTCCTCCACCAAACCCAAATCGCCACCGCCAGGGACACTGACGCCTGCCTCCCCCACCGAACTGCACCTCCGGGACACTGACGCCCGCCTCGCCGATCCCCTCACATCCTCTGCCGCTCCCCTCGCCCCCTTCCGCGTCGTCTGCACCGCCCACGATCTCCGCCTCGACGACCGGTTCCACAACGCCATTCCTCACGATCCCCTCCCGTCCTCCTCGATTGGCGTCGCCCCCGATCTCTCCTCGACCGCCTCCACGCAACCACCACCACCAATCTCCGCCGAGCACTGTTCTCCACCGGATCCCTCTCCACCGAGCCGCCGTCGGGTCGTCGGCAATCCCTCGACCTCCTCCGGGCTGCCACCGAGTCGGGATCCGGGAACGCGGCCGGATCAGCGTCAACCGCCTGGCCGCTCCTCCACTCCGCCACCACCGAGGGACATCTCCATCTACAAAAGGTAAAGAAAAATTCGCTACTGATTGAATGAACTCATTAGATAGTATACATTTAGTGTTTGCCATTTGCGGAAAGAATGGTTTTCAACAATTGTTGTATCAAGCATACATGTACTAAAAATGCATATGGTTTTAGTAAGCAGGAAATATACATTTATATGGTATTTGGAATGAGTATAGTAAGCAGCTTCTCAAGGAGAAAGCAAAGATTCAGGATGACGTTGTTTTGTATGATTCTTGGATAACATTATGTGTAATTATTTGCAGGATGTTGATGAAGGAAGAGAATTGCAACAGTTTTATGAAAAAAAAAAGTTGGATCAGATTATTGTGATGACCTTCACTGTGTTGTCTTCTGTCCTTCAGTTCTTCAGTTACCTTGCCTGCTAATGAGTTCTTTAAATTATTTTTAAGAGGCAAGGCACTATAGAATATTTGATGCTTGATGCTAATGAGTTTGGGCACTTTTCAGAACTGAAGGGCACTATAGAATATGCTCTATAAAGAATTTTGCAGGTTCTGTTATATGCATCACATATCGATTTGCACAACTTTTTTGGTTGTAGCTGCCAGAATGAAAAATTCCTGAACGCATGGCCGAAAATGAGTACATCTTTTGCAAGTATTGATTTGTGCACATCAGCTAGCTGCCAGAGCATGAAAAATTCCTCATTATGATACTGTTTGTTCACCTATTTAGCTTTAGCTATTGATGCGAGCCAGAAAAATTATACACCTGAAGACATTACCCTCTTGTAAATTTTATGTTATATATACCAACCTGTAGTAAACAACCATTAAATTTATAAGATTTATACTGAAAAAAGGAATACATTTTAAAAAATGTCTGACCATAAAAAAACTTATAAATACAAAATTTTGATAAAAAATGAAGTGTCTTAACATGAATATTAAAATATAATTTTCCAGAGTTACATGCCCTAAGGCATGACGGAAATTGTGTTGGATCGTGGCAATTTTCAGGAGAAAAATGGAACACATTTAAAATAATGCCTGGCCATAAAAAAACTTTTAAATAAAATACAAACTTTTGATGAAACATGGAGTGTCTTAACATGAAAATTAAAAATAGAATTTTCAAGAGTTACATGTACTAAGGCGTGATGGAATATGATGGGATGCCACTACTTAGAAGCTACGAAATCACTTTATAGCATGGCAAATTTATAGTCAAAATCTTCTCAGTTTTGTTATACTTTTAATTTAAAGCATGGCATTGATCACTAGCATTTGTTTGCAGCCGTCCTCTCTTCCCAGCTGACCCAGATGATCGCCAGCTCTATCCTGTCGGCTTCGTCTTACTGGATGTCATCGACCCTACCACCTACTGCCTCTAAGCCTGTCAGTTCCATCAAGGTTTTCTTTTTCTCCTCTTCCTATTCTCTATTTGTGTGATGGAATAGGACGAAGAGGTTCAGTAAAGGGGTCATTTTCTATGCCCGCGCTGTCGAGAGCTGTGACGCTTGAAGTGGCGGGGTGATGCTTGTTGCTTCTTGAACTCTCGCTATGTGTGCAAAAAGAGGAACAGTCTGTGCTCTTCCTGCATCATAGGTATAGCATACAATCTGAATTTTGATGTTTTGCATAAGAACTTTTTTCATTATTGCCTGAAGATGACCATTTGCTCATCACCCACATCCAGTCACCGGTGCCTCCCTGTTATGTCTCTAAATAGGCACATTGTTTGACGATGCATGATAGACCACAAATGGATAAGTCCTGATATGTCTCTAAAGATGCACATTGTTTGACGATGCATGATAGACCACAAATGGATAAGTTTAGGGAGGTAAAAAGGACCAATAAAGGAATAGTCCAGTTGTAAATCTTAATGCAACGCTCAATCTGTTGATAACTACTGTGAGATTACTGATGTTGTTACTTAAATGTAAAATATGTAGCTTACATAGTTTTTTTTGGCATATAGAATATATTAGCCCATGTCATATCTCTTCATAGCTTTTTTTAAGTTTTAGTTTCAACTAAGACAATAACTTTTGATCTTCTGTAAGGTTGGATAGCATAATAGGTTTATTTAGTCTTTATGCAGACATTCTCTTATTTGGATAGCTTGCTGTAGGAGACGGCGCAAGGTGATTGTGGAGGCATGGTGGACAATGGAAGCATTGAGACGTGCTAGAAGGCGTGATATGCAAAATTGTTGTGTATCATGCATGGATGTTTCAGGAACATTGGGTTAATTGTGTTGAGTATATAGTATTGAGATACTGATTAACTAAAATTGTCTAGGGGTGTTTATGGTTATGATCATAGTCATATTTACTGATTGATGGTAATGTTTTATTCTCTGAATTTTTCTATGGAGTACATCAAAATAGATGGT]




>consensus_1933#0
CTCTTTCTGACTCAGCGCTCGCCCCCTCCTTCCCCCATCTTGCGGCGAGCAGTCGCCCCG
ACTCCTCCACCAAACCCAAATCGCCACCGCCAGGGACACTGACGCCTGCCTCCCCCACCG
AACTGCACCTCCGGGACACTGACGCCCGCCTCGCCGATCCCCTCACATCCTCTGCCGCTC
CCCTCGCCCCCTTCCGCGTCGTCTGCACCGCCCACGATCTCCGCCTCGACGACCGGTTCC
ACAACGCCATTCCTCACGATCCCCTCCCGTCCTCCTCGATTGGCGTCGCCCCCGATCTCT
CCTCGACCGCCTCCACGCAACCACCACCACCAATCTCCGCCGAGCACTGTTCTCCACCGG
ATCCCTCTCCACCGAGCCGCCGTCGGGTCGTCGGCAATCCCTCGACCTCCTCCGGGCTGC
CACCGAGTCGGGATCCGGGAACGCGGCCGGATCAGCGTCAACCGCCTGGCCGCTCCTCCA
CTCCGCCACCACCGAGGGACATCTCCATCTACAAAAGGTAAAGAAAAATTCGCTACTGAT
TGAATGAACTCATTAGATAGTATACATTTAGTGTTTGCCATTTGCGGAAAGAATGGTTTT
CAACAATTGTTGTATCAAGCATACATGTACTAAAAATGCATATGGTTTTAGTAAGCAGGA
AATATACATTTATATGGTATTTGGAATGAGTATAGTAAGCAGCTTCTCAAGGAGAAAGCA
AAGATTCAGGATGACGTTGTTTTGTATGATTCTTGGATAACATTATGTGTAATTATTTGC
AGGATGTTGATGAAGGAAGAGAATTGCAACAGTTTTATGAAAAAAAAAAGTTGGATCAGA
TTATTGTGATGACCTTCACTGTGTTGTCTTCTGTCCTTCAGTTCTTCAGTTACCTTGCCT
GCTAATGAGTTCTTTAAATTATTTTTAAGAGGCAAGGCACTATAGAATATTTGATGCTTG
ATGCTAATGAGTTTGGGCACTTTTCAGAACTGAAGGGCACTATAGAATATGCTCTATAAA
GAATTTTGCAGGTTCTGTTATATGCATCACATATCGATTTGCACAACTTTTTTGGTTGTA
GCTGCCAGAATGAAAAATTCCTGAACGCATGGCCGAAAATGAGTACATCTTTTGCAAGTA
TTGATTTGTGCACATCAGCTAGCTGCCAGAGCATGAAAAATTCCTCATTATGATACTGTT
TGTTCACCTATTTAGCTTTAGCTATTGATGCGAGCCAGAAAAATTATACACCTGAAGACA
TTACCCTCTTGTAAATTTTATGTTATATATACCAACCTGTAGTAAACAACCATTAAATTT
ATAAGATTTATACTGAAAAAAGGAATACATTTTAAAAAATGTCTGACCATAAAAAAACTT
ATAAATACAAAATTTTGATAAAAAATGAAGTGTCTTAACATGAATATTAAAATATAATTT
TCCAGAGTTACATGCCCTAAGGCATGACGGAAATTGTGTTGGATCGTGGCAATTTTCAGG
AGAAAAATGGAACACATTTAAAATAATGCCTGGCCATAAAAAAACTTTTAAATAAAATAC
AAACTTTTGATGAAACATGGAGTGTCTTAACATGAAAATTAAAAATAGAATTTTCAAGAG
TTACATGTACTAAGGCGTGATGGAATATGATGGGATGCCACTACTTAGAAGCTACGAAAT
CACTTTATAGCATGGCAAATTTATAGTCAAAATCTTCTCAGTTTTGTTATACTTTTAATT
TAAAGCATGGCATTGATCACTAGCATTTGTTTGCAGCCGTCCTCTCTTCCCAGCTGACCC
AGATGATCGCCAGCTCTATCCTGTCGGCTTCGTCTTACTGGATGTCATCGACCCTACCAC
CTACTGCCTCTAAGCCTGTCAGTTCCATCAAGGTTTTCTTTTTCTCCTCTTCCTATTCTC
TATTTGTGTGATGGAATAGGACGAAGAGGTTCAGTAAAGGGGTCATTTTCTATGCCCGCG
CTGTCGAGAGCTGTGACGCTTGAAGTGGCGGGGTGATGCTTGTTGCTTCTTGAACTCTCG
CTATGTGTGCAAAAAGAGGAACAGTCTGTGCTCTTCCTGCATCATAGGTATAGCATACAA
TCTGAATTTTGATGTTTTGCATAAGAACTTTTTTCATTATTGCCTGAAGATGACCATTTG
CTCATCACCCACATCCAGTCACCGGTGCCTCCCTGTTATGTCTCTAAATAGGCACATTGT
TTGACGATGCATGATAGACCACAAATGGATAAGTCCTGATATGTCTCTAAAGATGCACAT
TGTTTGACGATGCATGATAGACCACAAATGGATAAGTTTAGGGAGGTAAAAAGGACCAAT
AAAGGAATAGTCCAGTTGTAAATCTTAATGCAACGCTCAATCTGTTGATAACTACTGTGA
GATTACTGATGTTGTTACTTAAATGTAAAATATGTAGCTTACATAGTTTTTTTTGGCATA
TAGAATATATTAGCCCATGTCATATCTCTTCATAGCTTTTTTTAAGTTTTAGTTTCAACT
AAGACAATAACTTTTGATCTTCTGTAAGGTTGGATAGCATAATAGGTTTATTTAGTCTTT
ATGCAGACATTCTCTTATTTGGATAGCTTGCTGTAGGAGACGGCGCAAGGTGATTGTGGA
GGCATGGTGGACAATGGAAGCATTGAGACGTGCTAGAAGGCGTGATATGCAAAATTGTTG
TGTATCATGCATGGATGTTTCAGGAACATTGGGTTAATTGTGTTGAGTATATAGTATTGA
GATACTGATTAACTAAAATTGTCTAGGGGTGTTTATGGTTATGATCATAGTCATATTTAC
TGATTGATGGTAATGTTTTATTCTCTGAATTTTTCTATGGAGTACATCAAAATAGATGGT

consensusID : consensus_1933#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1095
fasta sequence 
                              [GCTCTTTCTGACTCAGCGCTCGCCCCCTCCTTCCCCCATCTTGCGGCGAGCAGTCGCCCCGACTCCTCCACCAAACCCAAATCGCCACCGCCAGGGACACTGACGCCTGCCTCCCCCACCGAACTGCACCTCCGGGACACTGACGCCCGCCTCGCCGATCCCCTCACATCCTCTGCCGCTCCCCTCGCCCCCTTCCGCGTCGTCTGCACCGCCCACGATCTCCGCCTCGACGACCGGTTCCACAACGCCATTCCTCACGATCCCCTCCCGTCCTCCTCGATTGGCGTCGCCCCCGATCTCTCCTCGACCGCCTCCACGCAACCACCACCACCAATCTCCGCCGAGCACTGTTCTCCACCGGATCCCTCTCCACCGAGCCGCCGTCGGGTCGTCGGCAATCCCTCGACCTCCTCCGGGCTGCCACCGAGTCGGGATCCGGGAACGCGGCCGGATCAGCGTCAACCGCCTGGCCGCTCCTCCACTCCGCCACCACCGAGGGACATCTCCATCTACAAAAGCCGTCCTCTCTTCCCAGCTGACCCAGATGATCGCCAGCTCTATCCTGTCGGCTTCGTCTTACTGGATGTCATCGACCCTACCACCTACTGCCTCTAAGCCTGTCAGTTCCATCAAGGTTTTCTTTTTCTCCTCTTCCTATTCTCTATTTGTGTGATGGAATAGGACGAAGAGGTTCAGTAAAGGGGTCATTTTCTATGCCCGCGCTGTCGAGAGCTGTGACGCTTGAAGTGGCGGGGTGATGCTTGTTGCTTCTTGAACTCTCGCTATGTGTGCAAAAAGAGGAACAGTCTGTGCTCTTCCTGCATCATAGGAGACGGCGCAAGGTGATTGTGGAGGCATGGTGGACAATGGAAGCATTGAGACGTGCTAGAAGGCGTGATATGCAAAATTGTTGTGTATCATGCATGGATGTTTCAGGAACATTGGGTTAATTGTGTTGAGTATATAGTATTGAGATACTGATTAACTAAAATTGTCTAGGGGTGTTTATGGTTATGATCATAGTCATATTTACTGATTGATGGTAATGTTTTATTCTCTGAATTTTTCTATGGAGTACATCAAAATAGATGGTTT]

[+] EMBL AK061196             [GCTCTTTCTGACTCAGCGCTCGCCCCCTCCTTCCCCCATCTTGCGGCGAGCAGTCGCCCCGACTCCTCCACCAAACCCAAATCGCCACCGCCAGGGACACTGACGCCTGCCTCCCCCACCGAACTGCACCTCCGGGACACTGACGCCCGCCTCGCCGATCCCCTCACATCCTCTGCCGCTCCCCTCGCCCCCTTCCGCGTCGTCTGCACCGCCCACGATCTCCGCCTCGACGACCGGTTCCACAACGCCATTCCTCACGATCCCCTCCCGTCCTCCTCGATTGGCGTCGCCCCCGATCTCTCCTCGACCGCCTCCACGCAACCACCACCACCAATCTCCGCCGAGCACTGTTCTCCACCGGATCCCTCTCCACCGAGCCGCCGTCGGGTCGTCGGCAATCCCTCGACCTCCTCCGGGCTGCCACCGAGTCGGGATCCGGGAACGCGGCCGGATCAGCGTCAACCGCCTGGCCGCTCCTCCACTCCGCCACCACCGAGGGACATCTCCATCTACAAAAGCCGTCCTCTCTTCCCAGCTGACCCAGATGATCGCCAGCTCTATCCTGTCGGCTTCGTCTTACTGGATGTCATCGACCCTACCACCTACTGCCTCTAAGCCTGTCAGTTCCATCAAGGTTTTCTTTTTCTCCTCTTCCTATTCTCTATTTGTGTGATGGAATAGGACGAAGAGGTTCAGTAAAGGGGTCATTTTCTATGCCCGCGCTGTCGAGAGCTGTGACGCTTGAAGTGGCGGGGTGATGCTTGTTGCTTCTTGAACTCTCGCTATGTGTGCAAAAAGAGGAACAGTCTGTGCTCTTCCTGCATCATAGGAGACGGCGCAAGGTGATTGTGGAGGCATGGTGGACAATGGAAGCATTGAGACGTGCTAGAAGGCGTGATATGCAAAATTGTTGTGTATCATGCATGGATGTTTCAGGAACATTGGGTTAATTGTGTTGAGTATATAGTATTGAGATACTGATTAACTAAAATTGTCTAGGGGTGTTTATGGTTATGATCATAGTCATATTTACTGATTGATGGTAATGTTTTATTCTCTGAATTTTTCTATGGAGTACATCAAAATAGATGGTTT]




>consensus_1933#1
GCTCTTTCTGACTCAGCGCTCGCCCCCTCCTTCCCCCATCTTGCGGCGAGCAGTCGCCCC
GACTCCTCCACCAAACCCAAATCGCCACCGCCAGGGACACTGACGCCTGCCTCCCCCACC
GAACTGCACCTCCGGGACACTGACGCCCGCCTCGCCGATCCCCTCACATCCTCTGCCGCT
CCCCTCGCCCCCTTCCGCGTCGTCTGCACCGCCCACGATCTCCGCCTCGACGACCGGTTC
CACAACGCCATTCCTCACGATCCCCTCCCGTCCTCCTCGATTGGCGTCGCCCCCGATCTC
TCCTCGACCGCCTCCACGCAACCACCACCACCAATCTCCGCCGAGCACTGTTCTCCACCG
GATCCCTCTCCACCGAGCCGCCGTCGGGTCGTCGGCAATCCCTCGACCTCCTCCGGGCTG
CCACCGAGTCGGGATCCGGGAACGCGGCCGGATCAGCGTCAACCGCCTGGCCGCTCCTCC
ACTCCGCCACCACCGAGGGACATCTCCATCTACAAAAGCCGTCCTCTCTTCCCAGCTGAC
CCAGATGATCGCCAGCTCTATCCTGTCGGCTTCGTCTTACTGGATGTCATCGACCCTACC
ACCTACTGCCTCTAAGCCTGTCAGTTCCATCAAGGTTTTCTTTTTCTCCTCTTCCTATTC
TCTATTTGTGTGATGGAATAGGACGAAGAGGTTCAGTAAAGGGGTCATTTTCTATGCCCG
CGCTGTCGAGAGCTGTGACGCTTGAAGTGGCGGGGTGATGCTTGTTGCTTCTTGAACTCT
CGCTATGTGTGCAAAAAGAGGAACAGTCTGTGCTCTTCCTGCATCATAGGAGACGGCGCA
AGGTGATTGTGGAGGCATGGTGGACAATGGAAGCATTGAGACGTGCTAGAAGGCGTGATA
TGCAAAATTGTTGTGTATCATGCATGGATGTTTCAGGAACATTGGGTTAATTGTGTTGAG
TATATAGTATTGAGATACTGATTAACTAAAATTGTCTAGGGGTGTTTATGGTTATGATCA
TAGTCATATTTACTGATTGATGGTAATGTTTTATTCTCTGAATTTTTCTATGGAGTACAT
CAAAATAGATGGTTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_1933#0      -CTCTTTCTGACTCAGCGCTCGCCCCCTCCTTCCCCCATCTTGCGGCGAGCAGTCGCCCC 59
consensus_1933#1      GCTCTTTCTGACTCAGCGCTCGCCCCCTCCTTCCCCCATCTTGCGGCGAGCAGTCGCCCC 60
                       ***********************************************************

consensus_1933#0      GACTCCTCCACCAAACCCAAATCGCCACCGCCAGGGACACTGACGCCTGCCTCCCCCACC 119
consensus_1933#1      GACTCCTCCACCAAACCCAAATCGCCACCGCCAGGGACACTGACGCCTGCCTCCCCCACC 120
                      ************************************************************

consensus_1933#0      GAACTGCACCTCCGGGACACTGACGCCCGCCTCGCCGATCCCCTCACATCCTCTGCCGCT 179
consensus_1933#1      GAACTGCACCTCCGGGACACTGACGCCCGCCTCGCCGATCCCCTCACATCCTCTGCCGCT 180
                      ************************************************************

consensus_1933#0      CCCCTCGCCCCCTTCCGCGTCGTCTGCACCGCCCACGATCTCCGCCTCGACGACCGGTTC 239
consensus_1933#1      CCCCTCGCCCCCTTCCGCGTCGTCTGCACCGCCCACGATCTCCGCCTCGACGACCGGTTC 240
                      ************************************************************

consensus_1933#0      CACAACGCCATTCCTCACGATCCCCTCCCGTCCTCCTCGATTGGCGTCGCCCCCGATCTC 299
consensus_1933#1      CACAACGCCATTCCTCACGATCCCCTCCCGTCCTCCTCGATTGGCGTCGCCCCCGATCTC 300
                      ************************************************************

consensus_1933#0      TCCTCGACCGCCTCCACGCAACCACCACCACCAATCTCCGCCGAGCACTGTTCTCCACCG 359
consensus_1933#1      TCCTCGACCGCCTCCACGCAACCACCACCACCAATCTCCGCCGAGCACTGTTCTCCACCG 360
                      ************************************************************

consensus_1933#0      GATCCCTCTCCACCGAGCCGCCGTCGGGTCGTCGGCAATCCCTCGACCTCCTCCGGGCTG 419
consensus_1933#1      GATCCCTCTCCACCGAGCCGCCGTCGGGTCGTCGGCAATCCCTCGACCTCCTCCGGGCTG 420
                      ************************************************************

consensus_1933#0      CCACCGAGTCGGGATCCGGGAACGCGGCCGGATCAGCGTCAACCGCCTGGCCGCTCCTCC 479
consensus_1933#1      CCACCGAGTCGGGATCCGGGAACGCGGCCGGATCAGCGTCAACCGCCTGGCCGCTCCTCC 480
                      ************************************************************

consensus_1933#0      ACTCCGCCACCACCGAGGGACATCTCCATCTACAAAAGGTAAAGAAAAATTCGCTACTGA 539
consensus_1933#1      ACTCCGCCACCACCGAGGGACATCTCCATCTACAAAAGCCGTCCTCTC-TTCCCAGCTGA 539
                      **************************************           *** *  ****

consensus_1933#0      TTGAATGAACTCATTAGATAGTATACATTTAGTGTTTGCCATTTGCGGAAAGAATGGTTT 599
consensus_1933#1      CCCAGATGA-TCGCCAGCTC-TATCCTGTCGGC-TTCGTC-TTACTGGATGTCATCGACC 595
                         *    * **   ** *  *** *  *  *  ** * * **   ***    ** *   

consensus_1933#0      TCAACAATTGTTGTATC-AAGCATACATGTACTAAAAATGCATATGGTTTTAGTAAGCAG 658
consensus_1933#1      CTACCACCTACTGCCTCTAAGCCTGTCAGTTCCATCAAGGTTT-TCTTTTTCTCCTCTTC 654
                        * **  *  **  ** **** *    ** * *  ** *  * *  ****         

consensus_1933#0      GAAATATACATTTATATGGTATTTGGAATGAGTATAGTAAGCAGCTTCTCAAGGAGAAAG 718
consensus_1933#1      CTATTCTCTATTTGTGTGATG--------GAATAGGACGAAGAGGTTC----------AG 696
                        * * *  **** * ** *         ** **     *  ** ***          **

consensus_1933#0      CAAAGATTCAGGATGACGTTGTTTTGTATGATTCTTGGATAACATTATGTGTAATTATTT 778
consensus_1933#1      TAAAG-----GGGTCATTTTCTATGCCCGCGCTGTCGAGAGCTGTGACGCTTGA--AGTG 749
                       ****     ** * *  ** * *        * * *       * * *  * *  * * 

consensus_1933#0      GCAGGATGTTGATGAAGGAAGAGAATTGCAACAGTTTTATGAAAAAAAAAAGTTGGATCA 838
consensus_1933#1      GCGGGG---TGATGCTTGTTGCTTCTTGAACTCTCGCTATGTGTGCAAAAAGA-GGAACA 805
                      ** **    *****   *  *    *** *       ****     ******  *** **

consensus_1933#0      GATTATTGTGATGACCTTCACTGTGTTGTCTTCTGTCCTTCAGTTCTTCAGTTACCTTGC 898
consensus_1933#1      GTCTGTGCTCTT--CCTGCATCATAGGAGACGGCGCAAGGTGATTGTGGAGGCATGGTG- 862
                      *  * *  *  *  *** **   *          *        ** *  **  *   ** 

consensus_1933#0      CTGCTAATGAGTTCTTTAAATTATTTTTAAGAGGCAAGGCACTATAGAATATTTGATGCT 958
consensus_1933#1      --GACAATGGAAGCATTGAGACGTGCT-AGAAGGCGTGATA-TGCAAAATTGTTG-TGTA 917
                        *  ****    * ** *    *  * *  ****  *  * *  * ***  *** **  

consensus_1933#0      TGATGCTAATGAGTTTGGGCACTTTTCAGAACTGAAGGGCACTATAGAATATGCTCTATA 1018
consensus_1933#1      TCATGC--ATGG--------ATGTTTCAGGAACATTGGG-----TTAATTGTGTTGAGTA 962
                      * ****  ***         *  ****** *     ***     *  * * ** *   **

consensus_1933#0      AAGAATTTTGCAGGTTCTGTTATATGCATCACATATCGATTTGCACAACTTTTTTGGTTG 1078
consensus_1933#1      TATAGTATTG-AGATACTGAT-----TAACTAAAATTGTCTAGGG--GTGTTTATGGTTA 1014
                       * * * *** ** * *** *      * *  * ** *  * *       *** ***** 

consensus_1933#0      TAGCTGCCAGAATGAAAAATTCCTGAACGCATGGCCGAAAATGAGTACATCTTTTGCAAG 1138
consensus_1933#1      TGATCATAGTCAT----ATTTACTGATTG-ATGGT----AATGT-TTTATTCTCTG-AAT 1063
                      *          **    * ** ****  * ****     ****  *  **  * ** ** 

consensus_1933#0      TATTGATTTGTGCACATCAGC-TAGCTGCCAGAGCATGAAAAATTCCTCATTATGATACT 1197
consensus_1933#1      TTTTCTATGGAGTACATCAAAATAGATGGTTT---------------------------- 1095
                      * **   * * * ******   *** **                                

consensus_1933#0      GTTTGTTCACCTATTTAGCTTTAGCTATTGATGCGAGCCAGAAAAATTATACACCTGAAG 1257
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      ACATTACCCTCTTGTAAATTTTATGTTATATATACCAACCTGTAGTAAACAACCATTAAA 1317
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      TTTATAAGATTTATACTGAAAAAAGGAATACATTTTAAAAAATGTCTGACCATAAAAAAA 1377
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      CTTATAAATACAAAATTTTGATAAAAAATGAAGTGTCTTAACATGAATATTAAAATATAA 1437
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      TTTTCCAGAGTTACATGCCCTAAGGCATGACGGAAATTGTGTTGGATCGTGGCAATTTTC 1497
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      AGGAGAAAAATGGAACACATTTAAAATAATGCCTGGCCATAAAAAAACTTTTAAATAAAA 1557
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      TACAAACTTTTGATGAAACATGGAGTGTCTTAACATGAAAATTAAAAATAGAATTTTCAA 1617
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      GAGTTACATGTACTAAGGCGTGATGGAATATGATGGGATGCCACTACTTAGAAGCTACGA 1677
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      AATCACTTTATAGCATGGCAAATTTATAGTCAAAATCTTCTCAGTTTTGTTATACTTTTA 1737
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      ATTTAAAGCATGGCATTGATCACTAGCATTTGTTTGCAGCCGTCCTCTCTTCCCAGCTGA 1797
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      CCCAGATGATCGCCAGCTCTATCCTGTCGGCTTCGTCTTACTGGATGTCATCGACCCTAC 1857
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      CACCTACTGCCTCTAAGCCTGTCAGTTCCATCAAGGTTTTCTTTTTCTCCTCTTCCTATT 1917
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      CTCTATTTGTGTGATGGAATAGGACGAAGAGGTTCAGTAAAGGGGTCATTTTCTATGCCC 1977
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      GCGCTGTCGAGAGCTGTGACGCTTGAAGTGGCGGGGTGATGCTTGTTGCTTCTTGAACTC 2037
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      TCGCTATGTGTGCAAAAAGAGGAACAGTCTGTGCTCTTCCTGCATCATAGGTATAGCATA 2097
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      CAATCTGAATTTTGATGTTTTGCATAAGAACTTTTTTCATTATTGCCTGAAGATGACCAT 2157
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      TTGCTCATCACCCACATCCAGTCACCGGTGCCTCCCTGTTATGTCTCTAAATAGGCACAT 2217
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      TGTTTGACGATGCATGATAGACCACAAATGGATAAGTCCTGATATGTCTCTAAAGATGCA 2277
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      CATTGTTTGACGATGCATGATAGACCACAAATGGATAAGTTTAGGGAGGTAAAAAGGACC 2337
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      AATAAAGGAATAGTCCAGTTGTAAATCTTAATGCAACGCTCAATCTGTTGATAACTACTG 2397
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      TGAGATTACTGATGTTGTTACTTAAATGTAAAATATGTAGCTTACATAGTTTTTTTTGGC 2457
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      ATATAGAATATATTAGCCCATGTCATATCTCTTCATAGCTTTTTTTAAGTTTTAGTTTCA 2517
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      ACTAAGACAATAACTTTTGATCTTCTGTAAGGTTGGATAGCATAATAGGTTTATTTAGTC 2577
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      TTTATGCAGACATTCTCTTATTTGGATAGCTTGCTGTAGGAGACGGCGCAAGGTGATTGT 2637
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      GGAGGCATGGTGGACAATGGAAGCATTGAGACGTGCTAGAAGGCGTGATATGCAAAATTG 2697
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      TTGTGTATCATGCATGGATGTTTCAGGAACATTGGGTTAATTGTGTTGAGTATATAGTAT 2757
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      TGAGATACTGATTAACTAAAATTGTCTAGGGGTGTTTATGGTTATGATCATAGTCATATT 2817
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      TACTGATTGATGGTAATGTTTTATTCTCTGAATTTTTCTATGGAGTACATCAAAATAGAT 2877
consensus_1933#1      ------------------------------------------------------------
                                                                                  

consensus_1933#0      GGT 2880
consensus_1933#1      ---


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)