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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1955 cluster # 1955       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1955#0 length = 583 sequences # 2  

consensusID : consensus_1955#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 583
fasta sequence
                              [TCCCGTTTCTAGTATTGGCTGTCGGTGTGGACAACATGTGTATCCTTGTGCACGCTGTCAAACGCCAACCAGATGGCTTGGATTTGGAAGAACGGATAAGTACTGCATTGG-TGGAAGTTGGACCATCCATTACATTGGCCAGTTTGGCTGAAGTTTTAGCTTTTGCTGTGAGTGCAATCAATCCAATGCCTGCGACCAGAGTATTTTCCATGTTCGCTGCATTGGCGGTGCTTCTGGATTTCCTTCTCCAAGTTTCAGCTTTTGTGGCCCTTATTGTACTTGATTTCAGGAGGGCTCAAGATGGAAGGATTGATTGTATGCCTTGTGCGAGAGTAAAATCGAGTGTTGTTGCTTCTGATGGTGGTAACCACCAGGGGCTTCCTTTGCTTGCACGATACATGAAGAATGTCCATGCACCAATTCTCGGTTATCGGGCAGTGAAGTTTGTTGTGATTGCTGTGTTTGTAGGATTTTCATTTGCAAGCATAGCATTGTCCACTAGACTGCAACCAGGATTGGAGCAGAAAATTGTTCTACCACGAGATTCCTACTTACAGGATTATTTTGATGATCTTGNCACATA]

[+] EMBL CB639364             [TCCCGTTTCTAGTATTGGCTGTCGGTGTGGACAACATGTGTATCCTTGTGCACGCTGTCAAACGCCAACCAGATGGCTTGGATTTGGAAGAACGGATAAGTACTGCATTGG TGGAAGTTGGACCATCCATTACATTGGCCAGTTTGGCTGAAGTTTTAGCTTTTGCTGTGAGTGCAATCAATCCAATGCCTGCGACCAGAGTATTTTCCATGTTCGCTGCATTGGCGGTGCTTCTGGATTTCCTTCTCCAAGTTTCAGCTTTTGTGGCCCTTATTGTACTTGATTTCAGGAGGGCTCAAGATGGAAGGATTGATTGTATGCCTTGTGCGAGAGTAAAATCGAGTGTTGTTGCTTCTGATGGTGGTAACCACCAGGGGCTTCCTTTGCTTGCACGATACATGAAGAATGTCCATGCACCAATTCTCGGTTATCGGGCAGTGAAGTTTGTTGTGATTGCTGTGTTTGTAGGATTTTCATTTGCAAGCATAGCATTGTCCACTAGACTGCAACCAGGATTGGAGCAGAAAATTGTTCTACCACGAGATTCCTACTTACAGGATTATTTTGATGATCTTGNCACATA]
[+] EMBL CB638503             [TCCCGTTTCTAGTATTGGCTGTCGGTGTGGACAACATGTGTATCCTTGTGCACGCTGTCAAACGCCAACCAGATGGCTTGGATTTGGAAGAACGGATAAGTACTGCATTGGATGGAAGTTGGACCATCCATTACATTGGCCAGTTTGGCTGAAGTTTTAGCTTTTGCTGTGAGTGCAATCAATCCAATGCCTGCGACCAGAGTATTTTCCATGTTCGCTGCATTGGCGGTGCTTCTGGATTTCCTTCTCCAAGTTTCAGCTTTTGTGGCCCTTATTGTACTTGATTTCAGGAGGGCTCAAGATGGAAGGATTGATTGTATGCCTTGTGCGAGAGTAAAATCGAGTGTTGTTGCTTCTGATGGTGGTAACCACCAGGGGCTTCCTTATCTTGCACGATACATGAAGAATGTCCATGCACCAATTCTCGGTTATCGGGCAGTGAAGTTTGTTGTGAT                                                                                                                                 ]


>consensus_1955#0 TCCCGTTTCTAGTATTGGCTGTCGGTGTGGACAACATGTGTATCCTTGTGCACGCTGTCA AACGCCAACCAGATGGCTTGGATTTGGAAGAACGGATAAGTACTGCATTGGTGGAAGTTG GACCATCCATTACATTGGCCAGTTTGGCTGAAGTTTTAGCTTTTGCTGTGAGTGCAATCA ATCCAATGCCTGCGACCAGAGTATTTTCCATGTTCGCTGCATTGGCGGTGCTTCTGGATT TCCTTCTCCAAGTTTCAGCTTTTGTGGCCCTTATTGTACTTGATTTCAGGAGGGCTCAAG ATGGAAGGATTGATTGTATGCCTTGTGCGAGAGTAAAATCGAGTGTTGTTGCTTCTGATG GTGGTAACCACCAGGGGCTTCCTTTGCTTGCACGATACATGAAGAATGTCCATGCACCAA TTCTCGGTTATCGGGCAGTGAAGTTTGTTGTGATTGCTGTGTTTGTAGGATTTTCATTTG CAAGCATAGCATTGTCCACTAGACTGCAACCAGGATTGGAGCAGAAAATTGTTCTACCAC GAGATTCCTACTTACAGGATTATTTTGATGATCTTGNCACATA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)