cluster # 2002

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Oryza sativa
cluster # 2002 cluster # 2002 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2002#0 length = 460 sequences # 2

consensusID : consensus_2002#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 460
fasta sequence

                              [TATTTATTTTTCGGTCAAGCTAAACACAGCTTAGAATCTCAACTTAGTGAAGAACCATTTGTTAGTACCAGCATTGAACTTTTGTTGGAATTGCT-CCTTAATTTGATTCTTGAGCTTGGTCTTCTTGGCGGCATCCAAAGCATCATCCTTTCCAGCAGCGAACAAGTTCTTGGCTTCAAATTCCAAGTTGTATCTGGTGGGCATGAGGTGGTTGTAGTTCATCACCTTGACGAAAGGCTTAACGCGGGTTCTGCGAGAAATCTTTCTGCGGGTCATGGCCTTAGTGACCTTCAAGGGGGCCTTGTCGACACCAGCGAGGATGGCGTGACCGTAGGCGCGCTTGGTGTTAGTGTTACCCTCATCGAAGTTCTTCAAAATAACGGCTTTACGGCCAGCGAATTTACCGCGAGTAACGATGACGACCTTACCAGGCTTCAAAAACTTGACATTTCCTCGGCCG]

[+] EMBL CB965656             [TATTTATTTTTCGGTCAAGCTAAACACAGCTTAGAATCTCAACTTAGTGAAGAACCATTTGTTAGTACCAGCATTGAACTTTTGTTGGAATTGCT CCTTAATTTGATTCTTGAGCTTGGTCTTCTTGGCGGCATCCAAAGCATCATCCTTTCCAGCAGCGAACAAGTTCTTGGCTTCAAATTCCAAGTTGTATCTGGTGGGCATGAGGTGGTTGTAGTTCATCACCTTGACGAAAGGCTTAACGCGGGTTCTGCGAGAAATCTTTCTGCGGGTCATGGCCTTAGTGACCTTCAAGGGGGCCTTGTCGACACCAGCGAGGATGGCGTGACCGTAGGCGCGCTTGGTGTTAGTGTTACCCTCATCGAAGTTCTTCAAAATAACGGCTTTACGGCCAGCGAATTTACCGCGAGTAACGATGACGACCTTACCAGGCTTCAAAAA                   ]
[+] EMBL BU673461             [       TTTTCGGTCAAGCT AACACAGC NAGAATCTCAACTTAGTGAAGAACCATTTGTTAGTACCAGCATTGAACTTTTGTTGGAATTGCTCCCTTAATTTGATTC TGAGC TGGTCTTC TGGCGGCATCCAAAGCATCATCCTTTCCAGCAGCGAACAAGTTC TGGCTTCAAATTCCAAG TGTATCTGGTGGGCATGAGG GG TGTAGTTCATCACC TGACGAAAGGCTTAACGCGGGTTCTGCGAGAAATC TTCTGCGGGTCATGG CTTAG GACCTTCAAGGGGGCC TGTCGACACCAGCGAGGATG  GTGACCGTAGGCGCGC TGG G TAGTG TACCCTCATCGAAGTTCTTCAAAATAACGG TTTACGGCCAGCGAA TTACCG GAGTAACGATGACGA CTTACCAGGCTTCAAAAACTTGACATTTCCTCGGCCG]




>consensus_2002#0
TATTTATTTTTCGGTCAAGCTAAACACAGCTTAGAATCTCAACTTAGTGAAGAACCATTT
GTTAGTACCAGCATTGAACTTTTGTTGGAATTGCTCCTTAATTTGATTCTTGAGCTTGGT
CTTCTTGGCGGCATCCAAAGCATCATCCTTTCCAGCAGCGAACAAGTTCTTGGCTTCAAA
TTCCAAGTTGTATCTGGTGGGCATGAGGTGGTTGTAGTTCATCACCTTGACGAAAGGCTT
AACGCGGGTTCTGCGAGAAATCTTTCTGCGGGTCATGGCCTTAGTGACCTTCAAGGGGGC
CTTGTCGACACCAGCGAGGATGGCGTGACCGTAGGCGCGCTTGGTGTTAGTGTTACCCTC
ATCGAAGTTCTTCAAAATAACGGCTTTACGGCCAGCGAATTTACCGCGAGTAACGATGAC
GACCTTACCAGGCTTCAAAAACTTGACATTTCCTCGGCCG

clustalw multiple alignements is not computed in this case