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Oryza sativa
cluster # 2003 cluster # 2003       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2003#0 length = 1590 sequences # 2  

consensusID : consensus_2003#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1590
fasta sequence
                              [ACCGCCTTCTACTCCGTCTTCTTCCTCCTCTCTCTCTCTCTCTCTCCCTCGTTGCCGTCGCGACTCGCGAGGAAGACTGGTGTTTTGGGGGTACAGGGTTTGGTTCATCGAGGCGATGGAGAGCGGAGCCGGATCCTTGGAGGCGCGGCCGGGCGTCCTCGTCGTCGGCGCGCCTGGCGTCGGCAAGAGAACCATCCTCTCCCGACTGCTTGCAGCTGAAATACCGGACACACATGACTTGTCATCAGGTGTGCTGTGTCAGGGGTGGAACATTGACACAAAGTACTACTCAGCAGATCTTTCTGTTTGGACGGCACATCTTGGGCAAGGGTTTTCTCTTGATTCCCTCCCTCATCTCGACCAGTTGGATGCTCTTGTTATGGTCTTCGATATGAGTGATGAATCATCCTTCCTTACTCTCCAGAACTGGGTTTCTAGTGTTGATGTTCAGAGGTTTGAAATTCTGTTGTGCATTGGAAATAAAGCAGATCTTGTGCTTGGCCATGGTGCACACGTAGAATATAGGAGGCGTATGCAAAAGATTGGCGAGTCAAGTACTGATCCACATCCTGAATATTTGGATTTTGGGATAAACGAAAGTGAAGGTTGTGGATTGTTATCAGAGGAAGAACCACAAATAGAGATCAGAGACTCCGCTTCACATTGGTGCATTGAACACAATATTGAGTATGTCAAAGCTTGTGCTTCCAATGCTGACTTTGATAAATGTCTATCGGTGAATGGAGATAGTCAAGGCTTAGAGCGACTCCTTGGAGCCCTTTCTGCACACATGTGGCCTGGAATGATTCTGAAATCTGGAAACAGAATAACCGTTCCATCCTTGGTTGAGAAAGAAGAATCTACAGATGATGAATCCAATTACGAATTTGAGTACGAAGTTCTGTCCCATGGATCTGATGAACAATGGGAATTCATTGGTGAGTCAAGTACGTCAAGAGACTTGGAGGGATTGAATGAAGATACAGCTACTCATGATAAAACTAATCAGGTTGTGGATGCTGATGCTAATTCAGTGGCATCCAATCCTCTTCCAAATGGCAGAATGACAGAAACTGCTGAGGAAAAACTGGTACCTCAGAGCCACAAAAGCGAGGTTAGTAATGATATGGATAACACACAAGCAGATGCTTCAGAGAAACTGCAAGCTGGTATCCCAGAGGGTAACAAGCTATTTGAAGATGAGCATTACGGTCTAGATGATCTGGAGCGGCTAATGTCAGAGATTGGCAACATGCGCTCCAATTTAAGGCTCATGCCTGACTTCCAAAGGAAAGAGATGGCTGCCAAGCTTGCCATGAAAATGGCAACCATGTTTGGTGATAACGACGAAGAGGGCTCTGAAGATATCTGATTCAATTCACGGAGCCCACCTTTTGCATGTCTTCAAACATATGTTCCCAGTTTATGGCGTGCTGATTTGTACAGGCAGATGGGCCGCAGGCCGTGTAGGCATTTCCATCGGCTATCATAATTCCCAGTGAAATTTTGTACCTTAGTAGTTCCATATTTACCATTCTTACTGCTGTAAGTTGTATACTGTATTATTTGAAATTAAAGTTCTCTGGAATC]

[+] EMBL AK102568             [ACCGCCTTCTACTCCGTCTTCTTCCTCCTCTCTCTCTCTCTCTCTCCCTCGTTGCCGTCGCGACTCGCGAGGAAGACTGGTGTTTTGGGGGTACAGGGTTTGGTTCATCGAGGCGATGGAGAGCGGAGCCGGATCCTTGGAGGCGCGGCCGGGCGTCCTCGTCGTCGGCGCGCCTGGCGTCGGCAAGAGAACCATCCTCTCCCGACTGCTTGCAGCTGAAATACCGGACACACATGACTTGTCATCAGGTGTGCTGTGTCAGGGGTGGAACATTGACACAAAGTACTACTCAGCAGATCTTTCTGTTTGGACGGCACATCTTGGGCAAGGGTTTTCTCTTGATTCCCTCCCTCATCTCGACCAGTTGGATGCTCTTGTTATGGTCTTCGATATGAGTGATGAATCATCCTTCCTTACTCTCCAGAACTGGGTTTCTAGTGTTGATGTTCAGAGGTTTGAAATTCTGTTGTGCATTGGAAATAAAGCAGATCTTGTGCTTGGCCATGGTGCACACGTAGAATATAGGAGGCGTATGCAAAAGATTGGCGAGTCAAGTACTGATCCACATCCTGAATATTTGGATTTTGGGATAAACGAAAGTGAAGGTTGTGGATTGTTATCAGAGGAAGAACCACAAATAGAGATCAGAGACTCCGCTTCACATTGGTGCATTGAACACAATATTGAGTATGTCAAAGCTTGTGCTTCCAATGCTGACTTTGATAAATGTCTATCGGTGAATGGAGATAGTCAAGGCTTAGAGCGACTCCTTGGAGCCCTTTCTGCACACATGTGGCCTGGAATGATTCTGAAATCTGGAAACAGAATAACCGTTCCATCCTTGGTTGAGAAAGAAGAATCTACAGATGATGAATCCAATTACGAATTTGAGTACGAAGTTCTGTCCCATGGATCTGATGAACAATGGGAATTCATTGGTGAGTCAAGTACGTCAAGAGACTTGGAGGGATTGAATGAAGATACAGCTACTCATGATAAAACTAATCAGGTTGTGGATGCTGATGCTAATTCAGTGGCATCCAATCCTCTTCCAAATGGCAGAATGACAGAAACTGCTGAGGAAAAACTGGTACCTCAGAGCCACAAAAGCGAGGTTAGTAATGATATGGATAACACACAAGCAGATGCTTCAGAGAAACTGCAAGCTGGTATCCCAGAGGGTAACAAGCTATTTGAAGATGAGCATTACGGTCTAGATGATCTGGAGCGGCTAATGTCAGAGATTGGCAACATGCGCTCCAATTTAAGGCTCATGCCTGACTTCCAAAGGAAAGAGATGGCTGCCAAGCTTGCCATGAAAATGGCAACCATGTTTGGTGATAACGACGAAGAGGGCTCTGAAGATATCTGATTCAATTCACGGAGCCCACCTTTTGCATGTCTTCAAACATATGTTCCCAGTTTATGGCGTGCTGATTTGTACAGGCAGATGGGCCGCAGGCCGTGTAGGCATTTCCATCGGCTATCATAATTCCCAGTGAAATTTTGTACCTTAGTAGTTCCATATTTACCATTCTTACTGCTGTAAGTTGTATACTGTATTATTTGAAATT                ]
[+] EMBL AK058492             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TAAACGAAAGTGAAGGTTGTGGATTGTTATCAGAGGAAGAACCACAAATAGAGATCAGAGACTCCGCTTCACATTGGTGCATTGAACACAATATTGAGTATGTCAAAGCTTGTGCTTCCAATGCTGACTTTGATAAATGTCTATCGGTGAATGGAGATAGTCAAGGCTTAGAGCGACTCCTTGGAGCCCTTTCTGCACACATGTGGCCTGGAATGATTCTGAAATCTGGGAACAGAATAACCGTTCCATCCTTGGTTGAGAAAGAAGAATCTACAGATGATGAATCCAATTACGAATTTGAGTACGAAGTTCTGTCCCATGGATCTGATGAACAATGGGAATTCATTGGTGAGTCAAGTACGTCAAGAGACTTGGAGGGATTGAATGAAGATACAGCTACTCATGATAAAACTAATCAGGTTGTGGATGCTGATGCTAATTCAGTGGCATCCAATCCTCTTCCAAATGGCAGAATGACAGAAACTGCTGAGGAAAAACTGGTACCTCAGAGCCACAAAAGCGAGGTTAGTAATGATATGGATAACACACAAGCAGATGCTTCAGAGAAACTGCAAGCTGGTATCCCAGAGGGTAACAAGCTATTTGAAGATGAGCATTACGGTCTAGATGATCTGGAGCGGCTAATGTCAGAGATTGGCAACATGCGCTCCAATTTAAGGCTCATGCCTGACTTCCAAAGGAAAGAGATGGCTGCCAAGCTTGCCATGAAAATGGCAACCATGTTTGGTGATAACGACGAAGAGGGCTCTGAAGATATCTGATTCAATTCACGGAGCCCACCTTTTGCATGTCTTCAAACATATGTTCCCAGTTTATGGCGTGCTGATTTGTACAGGCAGATGGGCCGCAGGCCGTGTAGGCATTTCCATCGGCTATCATAATTCCCAGTGAAATTTTGTACCTTAGTAGTTCCATATTTACCATTCTTACTGCTGTAAGTTGTATACTGTATTATTTGAAATTAAAGTTCTCTGGAATC]


>consensus_2003#0 ACCGCCTTCTACTCCGTCTTCTTCCTCCTCTCTCTCTCTCTCTCTCCCTCGTTGCCGTCG CGACTCGCGAGGAAGACTGGTGTTTTGGGGGTACAGGGTTTGGTTCATCGAGGCGATGGA GAGCGGAGCCGGATCCTTGGAGGCGCGGCCGGGCGTCCTCGTCGTCGGCGCGCCTGGCGT CGGCAAGAGAACCATCCTCTCCCGACTGCTTGCAGCTGAAATACCGGACACACATGACTT GTCATCAGGTGTGCTGTGTCAGGGGTGGAACATTGACACAAAGTACTACTCAGCAGATCT TTCTGTTTGGACGGCACATCTTGGGCAAGGGTTTTCTCTTGATTCCCTCCCTCATCTCGA CCAGTTGGATGCTCTTGTTATGGTCTTCGATATGAGTGATGAATCATCCTTCCTTACTCT CCAGAACTGGGTTTCTAGTGTTGATGTTCAGAGGTTTGAAATTCTGTTGTGCATTGGAAA TAAAGCAGATCTTGTGCTTGGCCATGGTGCACACGTAGAATATAGGAGGCGTATGCAAAA GATTGGCGAGTCAAGTACTGATCCACATCCTGAATATTTGGATTTTGGGATAAACGAAAG TGAAGGTTGTGGATTGTTATCAGAGGAAGAACCACAAATAGAGATCAGAGACTCCGCTTC ACATTGGTGCATTGAACACAATATTGAGTATGTCAAAGCTTGTGCTTCCAATGCTGACTT TGATAAATGTCTATCGGTGAATGGAGATAGTCAAGGCTTAGAGCGACTCCTTGGAGCCCT TTCTGCACACATGTGGCCTGGAATGATTCTGAAATCTGGAAACAGAATAACCGTTCCATC CTTGGTTGAGAAAGAAGAATCTACAGATGATGAATCCAATTACGAATTTGAGTACGAAGT TCTGTCCCATGGATCTGATGAACAATGGGAATTCATTGGTGAGTCAAGTACGTCAAGAGA CTTGGAGGGATTGAATGAAGATACAGCTACTCATGATAAAACTAATCAGGTTGTGGATGC TGATGCTAATTCAGTGGCATCCAATCCTCTTCCAAATGGCAGAATGACAGAAACTGCTGA GGAAAAACTGGTACCTCAGAGCCACAAAAGCGAGGTTAGTAATGATATGGATAACACACA AGCAGATGCTTCAGAGAAACTGCAAGCTGGTATCCCAGAGGGTAACAAGCTATTTGAAGA TGAGCATTACGGTCTAGATGATCTGGAGCGGCTAATGTCAGAGATTGGCAACATGCGCTC CAATTTAAGGCTCATGCCTGACTTCCAAAGGAAAGAGATGGCTGCCAAGCTTGCCATGAA AATGGCAACCATGTTTGGTGATAACGACGAAGAGGGCTCTGAAGATATCTGATTCAATTC ACGGAGCCCACCTTTTGCATGTCTTCAAACATATGTTCCCAGTTTATGGCGTGCTGATTT GTACAGGCAGATGGGCCGCAGGCCGTGTAGGCATTTCCATCGGCTATCATAATTCCCAGT GAAATTTTGTACCTTAGTAGTTCCATATTTACCATTCTTACTGCTGTAAGTTGTATACTG TATTATTTGAAATTAAAGTTCTCTGGAATC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)