cluster # 2155

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Oryza sativa
cluster # 2155 cluster # 2155 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2155#0 length = 654 sequences # 2

consensusID : consensus_2155#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 654
fasta sequence

                              [GAAAAGATATCGTCCCAAACTGCTGNGAATCTGTGCGTTTTCTTAGGCAGACACATGAACANATCCCTGATGTTGTTAGCCGCCAAATTGCAGGTTCAGCCCTTTTCATCATCCAACCTAGAAAAGGGAAAAGGAACATTTGGAAGCATTGCTATGATAGCAAAACATCAAGGTT-GCGGCAACTGTTCTCAGGATTATCTATCAACTATTTGAAGGTGGTCCCATCAGTAGCCATAGGGTTTACAGTTTATGACTCAATGAAGGTTTGGCTTAAAGTTCCATCGAGAGAGGACACGGCTATTGCTGCGCTGACAGAAGAAAGAAGTAATGCAGCCCCTGCTCACTCCAGTTAGTACAAATCATACTCTTTTGGTGGTGCAATCCCCTTCATTGCCTTGATATTTTCGGCATGTAACATAGCATTATTTCTTGGGGCTGTTGTACCACCACAATTCTTAGGCTCATCCACATAGTGCAGAAAATAATTCGGCCTTCAATAAGCCCATAAGCGGCATGGTCACGGATGCCTAAAGATTGGCATTTGACTAGAGATAGAATTCTTTGCTGATTCTAGGGGAATTTCACAATGTACAGATTCTGTATATAATTGAATACAGCTAGTCAGCTTGTATCTAACTGAAAGCTTAGTAAAAA]

[+] EMBL BQ907173             [GAAAAGATATCGTCCCAAACTGCTGNGAATCTGTGCGTTTTCTTAGGCAGACACATGAACANATCCCTGATGTTGTTAGCCGCCAAATTGCAGGTTCAGCCCTTTTCATCATCCAACCTAGAAAAGGGAAAAGGAACATTTGGAAGCATTGCTATGATAGCAAAACATCAAGGTT GCGGCAACTGTTCTCAGGATTATCTATCAACTATTTGAAGGTGGTCCCATCAGTAGCCATAGGGTTTACAGTTTATGACTCAATGAAGGTTTGGCTTAAAGTTCCATCGAGAGAGGACACGGCTATTGCTGCGCTGACAGAAGAAAGAAGTAATGCAGCCCCTGCTCACTCCAGTTAGTACAAATCATACTCTTTTGGTGGTGCAATCCCCTTCATTGCCTTGATATTTTCGGCATGTAACATAGCATTATTTCTTGGGGCTGTTGTACCACCACAATTCTTAGGCTCATCCACATAGTGCAGAAAATAATTCGGCCTTCAATAAGCCCATAAGCGGCATGGTCACGGATGCCTAAAGATTGGCATTTGACTAGAGATAGAATTCTTTGCTGATTCTAGGGGAATTTCACAATGTACAGATTCTGTATATAATTGAATACAGCTAGTCAGCTTGTATCTAACTGAAAGCTTAGTAAAAA]
[-] EMBL CF568773             [                                                                                                    CCTTTTCATCATCCAACCTAGAAAAGGGAAAAGGAACATTTGGAAGCATTGCTATGATAGCAAAACATCAAGGTTGGCGGCAACTGTTCTCAGGATTATCTATCAACTATTTGAAGGTGGTCCCATCAGTAGCCATAGGGTTTACAGTTTATGACTCAATGAAGGTTTGGCTTAAAGTTCCATCGAGAGAGGACACGGCTATTGCTGCGCTGACAGAAGAAAGAAGTAATGCAGCCCCTGCTCACTC                                                                                                                                                                                                                                                                                                                    ]




>consensus_2155#0
GAAAAGATATCGTCCCAAACTGCTGNGAATCTGTGCGTTTTCTTAGGCAGACACATGAAC
ANATCCCTGATGTTGTTAGCCGCCAAATTGCAGGTTCAGCCCTTTTCATCATCCAACCTA
GAAAAGGGAAAAGGAACATTTGGAAGCATTGCTATGATAGCAAAACATCAAGGTTGCGGC
AACTGTTCTCAGGATTATCTATCAACTATTTGAAGGTGGTCCCATCAGTAGCCATAGGGT
TTACAGTTTATGACTCAATGAAGGTTTGGCTTAAAGTTCCATCGAGAGAGGACACGGCTA
TTGCTGCGCTGACAGAAGAAAGAAGTAATGCAGCCCCTGCTCACTCCAGTTAGTACAAAT
CATACTCTTTTGGTGGTGCAATCCCCTTCATTGCCTTGATATTTTCGGCATGTAACATAG
CATTATTTCTTGGGGCTGTTGTACCACCACAATTCTTAGGCTCATCCACATAGTGCAGAA
AATAATTCGGCCTTCAATAAGCCCATAAGCGGCATGGTCACGGATGCCTAAAGATTGGCA
TTTGACTAGAGATAGAATTCTTTGCTGATTCTAGGGGAATTTCACAATGTACAGATTCTG
TATATAATTGAATACAGCTAGTCAGCTTGTATCTAACTGAAAGCTTAGTAAAAA

clustalw multiple alignements is not computed in this case