cluster # 2178

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Oryza sativa
cluster # 2178 cluster # 2178 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2178#0 length = 1277 sequences # 2
consensusID : consensus_2178#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1277
fasta sequence
                              [CTCCGACGCGCTCTCCGCCTTCCCGGACTTCCCGCGCCTCGCCGCCGACCGCTACCCGCACCTCTCCGACCTCCTCCCCCCGCTCCTCCGCGCCATCCACTCCCACTCCCTCCGCCGCTTCGCCGACGCCTACTCCTCCTTCGAGAAGGCCGCCAACGCGTTCTTGCAGGAGTTCCGGAACTGGGAGACGCCGTGGGCGATGGAGGCGATGCACACGGTGGCGCTTGAGATCAGGCTGCTGGCTGAGAAGGCAGATAGGGAGCTTGCAACGAGTGGGAAGAACCCTGACAAGCTGCAGTCTGCTGGGTCCTTCCTGATGAAGGTTTTCGGTGCACTCGCGGTTAAAGGGCCTAAACGCATTGGAGCACTCTATGTTACCTGCCAGCTATTTAAAATTTACTTCAGACTTGGAACAGTTCACCTTTGTCGCAGTGTCATAAGAAGTATTGAAACTGCCAGGAATTTTGATTTTGAAGATTTTCCAGTGAAAGATAAGGTCACTTATATGTATTATACCGGCAGATTAGAGGTGTTTAATGAGAACTTTCTTGTTGCAGATCAGAAGCTAACTTATGCTTTGGTGCACTGTAATCCTCAGTATGAGTCAAATTTGAGGAGAATTTTGAAGTTTCTTATCCCAGTAAAGCTTTCAATAGGTGTTTTGCCAAGAATAACACTACTGGAGAGGTACAATCTGCTTGAGTATGCAGATGTTGTGACCTCACTTAAGAGAGGAGATCTCAGGCTTCTTAGGCAAGCACTCGAAAGGCATGAAGACCAATTCTTAAAATCTGGTGTCTACCTTGTATTGGAGAAGCTTGAACTTCAAGTCTAT-CAGAGATTAGTTAAGAAAATCCATATCATTCAGAGGCAGAAGGAGCCAGCCAAGGCACATCAAATTAAGCTAGAAGTCGTTGTAAAAGCTTTGAAATGGCTTGAAATTGACA-TGGACGTGGATGAGGTGGAGTGCATCA-TGGCGTGCCTAATATACAAGAATCTCATTAAAGGATACTTTGCTCATAAGAGCAAAGTTCTTGTCCTCAGCAAACAAGATCCTTTCCCAAAGTTGAATGGGAAGCCTGTCTAGTTCATAGTCGCCCCTGAAAAGAATTAACTATCTCCTATTCTGTTGTATTCGGCACATGTTTTTGTAAAACGTTGAAAAACTATTGCCTGACAGTAACATTTGTATTATTGTAACACGTGGTGTTTGTACTAGTGTAACCAAGAGACCCTTTCGCCCGGTAATAAATGACACTTATCTACCAAAAAAAAAA]

[+] EMBL AK063271             [CTCCGACGCGCTCTCCGCCTTCCCGGACTTCCCGCGCCTCGCCGCCGACCGCTACCCGCACCTCTCCGACCTCCTCCCCCCGCTCCTCCGCGCCATCCACTCCCACTCCCTCCGCCGCTTCGCCGACGCCTACTCCTCCTTCGAGAAGGCCGCCAACGCGTTCTTGCAGGAGTTCCGGAACTGGGAGACGCCGTGGGCGATGGAGGCGATGCACACGGTGGCGCTTGAGATCAGGCTGCTGGCTGAGAAGGCAGATAGGGAGCTTGCAACGAGTGGGAAGAACCCTGACAAGCTGCAGTCTGCTGGGTCCTTCCTGATGAAGGTTTTCGGTGCACTCGCGGTTAAAGGGCCTAAACGCATTGGAGCACTCTATGTTACCTGCCAGCTATTTAAAATTTACTTCAGACTTGGAACAGTTCACCTTTGTCGCAGTGTCATAAGAAGTATTGAAACTGCCAGGAATTTTGATTTTGAAGATTTTCCAGTGAAAGATAAGGTCACTTATATGTATTATACCGGCAGATTAGAGGTGTTTAATGAGAACTTTCTTGTTGCAGATCAGAAGCTAACTTATGCTTTGGTGCACTGTAATCCTCAGTATGAGTCAAATTTGAGGAGAATTTTGAAGTTTCTTATCCCAGTAAAGCTTTCAATAGGTGTTTTGCCAAGAATAACACTACTGGAGAGGTACAATCTGCTTGAGTATGCAGATGTTGTGACCTCACTTAAGAGAGGAGATCTCAGGCTTCTTAGGCAAGCACTCGAAAGGCATGAAGACCAATTCTTAAAATCTGGTGTCTACCTTGTATTGGAGAAGCTTGAACTTCAAGTCTAT CAGAGATTAGTTAAGAAAATCCATATCATTCAGAGGCAGAAGGAGCCAGCCAAGGCACATCAAATTAAGCTAGAAGTCGTTGTAAAAGCTTTGAAATGGCTTGAAATTGACA TGGACGTGGATGAGGTGGAGTGCATCA TGGCGTGCCTAATATACAAGAATCTCATTAAAGGATACTTTGCTCATAAGAGCAAAGTTCTTGTCCTCAGCAAACAAGATCCTTTCCCAAAGTTGAATGGGAAGCCTGTCTAGTTCATAGTCGCCCCTGAAAAGAATTAACTATCTCCTATTCTGTTGTATTCGGCACATGTTTTTGTAAAACGTTGAAAAACTATTGCCTGACAGTAACATTTGTA                                                                                      ]
[+] EMBL BI812069             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GAGATCTCAGCCTTCTTA GCACACCCTCGAAAGGCATGAAGACCCATTCTTAAAATCTGGTGTCTACC TGTATTGGAGAAGCTTGAACTTCAAGTCTATCCAGAGATTAGTTAAGAAAATCCATATCATTCAGA GCCGAAGGAGCCCGCCCAGGCACATCCAATTAAGCTAGAAGTCGTTGTAAAAGCTTTGAAATGGCTTGAAATTGACACTGGACGTGGATGAGGTGGAGTGCATCACTGGCGTGCCTAATATACCAGAATCTCCTTAAAGGATACTTTGCTCATAAGAGCCAAGTTCTTGTCCTCAGCCAACCAGATCCTTTCCCCAAGTTGAATGGGAAGCCTGTCTAGTTCATAGTCGCCCCTGAAAAGAATTAACTATCTCCTATTCTGTTGTATTCGGCACATGTTTTTGTAAAACGTTGAAAAACTATTGCCTGACAGTAACATTTGTATTATTGTAACACGTGGTGTTTGTACTAGTGTAACCAAGAGACCCTTTCGCCCGGTAATAAATGACACTTATCTACCAAAAAAAAAA]




>consensus_2178#0
CTCCGACGCGCTCTCCGCCTTCCCGGACTTCCCGCGCCTCGCCGCCGACCGCTACCCGCA
CCTCTCCGACCTCCTCCCCCCGCTCCTCCGCGCCATCCACTCCCACTCCCTCCGCCGCTT
CGCCGACGCCTACTCCTCCTTCGAGAAGGCCGCCAACGCGTTCTTGCAGGAGTTCCGGAA
CTGGGAGACGCCGTGGGCGATGGAGGCGATGCACACGGTGGCGCTTGAGATCAGGCTGCT
GGCTGAGAAGGCAGATAGGGAGCTTGCAACGAGTGGGAAGAACCCTGACAAGCTGCAGTC
TGCTGGGTCCTTCCTGATGAAGGTTTTCGGTGCACTCGCGGTTAAAGGGCCTAAACGCAT
TGGAGCACTCTATGTTACCTGCCAGCTATTTAAAATTTACTTCAGACTTGGAACAGTTCA
CCTTTGTCGCAGTGTCATAAGAAGTATTGAAACTGCCAGGAATTTTGATTTTGAAGATTT
TCCAGTGAAAGATAAGGTCACTTATATGTATTATACCGGCAGATTAGAGGTGTTTAATGA
GAACTTTCTTGTTGCAGATCAGAAGCTAACTTATGCTTTGGTGCACTGTAATCCTCAGTA
TGAGTCAAATTTGAGGAGAATTTTGAAGTTTCTTATCCCAGTAAAGCTTTCAATAGGTGT
TTTGCCAAGAATAACACTACTGGAGAGGTACAATCTGCTTGAGTATGCAGATGTTGTGAC
CTCACTTAAGAGAGGAGATCTCAGGCTTCTTAGGCAAGCACTCGAAAGGCATGAAGACCA
ATTCTTAAAATCTGGTGTCTACCTTGTATTGGAGAAGCTTGAACTTCAAGTCTATCAGAG
ATTAGTTAAGAAAATCCATATCATTCAGAGGCAGAAGGAGCCAGCCAAGGCACATCAAAT
TAAGCTAGAAGTCGTTGTAAAAGCTTTGAAATGGCTTGAAATTGACATGGACGTGGATGA
GGTGGAGTGCATCATGGCGTGCCTAATATACAAGAATCTCATTAAAGGATACTTTGCTCA
TAAGAGCAAAGTTCTTGTCCTCAGCAAACAAGATCCTTTCCCAAAGTTGAATGGGAAGCC
TGTCTAGTTCATAGTCGCCCCTGAAAAGAATTAACTATCTCCTATTCTGTTGTATTCGGC
ACATGTTTTTGTAAAACGTTGAAAAACTATTGCCTGACAGTAACATTTGTATTATTGTAA
CACGTGGTGTTTGTACTAGTGTAACCAAGAGACCCTTTCGCCCGGTAATAAATGACACTT
ATCTACCAAAAAAAAAA
clustalw multiple alignements is not computed in this case