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Oryza sativa
cluster # 2215 cluster # 2215       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2215#0 length = 1374 sequences # 2  

consensusID : consensus_2215#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1374
fasta sequence
                              [CAAAAACCCAAACCAAACGCGCGACGCCTCAGCTTTCTCCTGCTCCTCCTGCCACTCACCAACCCAACGCAAAGCATCGCGGCCGCGAGGTCGTCGACCTCGTCGTCGTCGTCGATGGAGGTGGAGGCGTTCCCGATACGGTTCACGAGGGGAATACGGTCGCACTGGGGGAGGCGCAAGTACCAGCGGCTGGAGGCGGCGAACGGCGGCGGGAAGACGAGGGCGACGCAGCAGCTGGGCGGCGCGCGCCGCGGCGGTGCGGGGTGGGGGCTGCGGCTGCGGCGGCTGCTCCGCGTCCGCGTGCGCGTGGCGAGGGCGTGGCTGTCGTCCCCGGCGCGGCTGCTGGCGCGGATCCGCGACGCGTACGTGGGCGGCATGCTCGCCGTGTCGAGGAAGGCGTCGGGCATGTCGCTGCCGAACGCGCCCGAGGGGCTGTGGCCTAGGCGCGTGCCGCGCCGGAAGCAGCTCCCGGCGGCGCGGCCAGGCCAGCTCACCGACTTCGAGCAGAGGCTCGTCGTCGAGATATACAAGTCCATCGTCGCCTCCAAGGAGCTCACCACCATGCTCCACCACTCCACCGCGCACCTGCCGCAGCAGCACAACACGGCGGCGCCGGCGTCCAGTGGCCAGCTGCTAGTCAATTAGCGTGCTGTCTGTATCCACCATCGACATGGGAACTGAACCGCGAGAGCTCCTGCAAGTTCGTTTGCTCGATCGCTGCTCATGTTGATGATTATTACTACTGCTGTTTCTTCCTTGTAATTTGTAAGAAGTATTAGTTAGGACAAGATGATGATGTACACTTCAATTTCTACCTGGTGCAAATCACCAT-GCCGCCGCGAGTATGTTTAATTTCGTAACCAAGAAATCGATCAAGCAAAGTTCGTGCCT-CCGCGCACC-TTGTTCTTGTTAAAAAAAANAAAANANANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGGGGGGGCCGGACCCAATCGCCCTATGGGGAGCGATACGCCGCGCTAAGTGCCGCGTTTAACACGTCGGACTGAAAACCCCTGCGAACCACCTTATCGCCTGGAGAAATCCCCTTTGCCAGCTGCGAATACGAAAAGCCNACACGACGCTTTCCACAGTGCCAACCTAATGAAATGCACCCCCTTGCGGGCTATAACGGCGCGGTTGGGTCCCAAGGCCGTCATTGCAGCCTAGCCCGTCTTCGTTTTCTTTTTTCCAATTCGGGTCCGGGGTCTACAAGAATAAAGGGGCCTTGTGGCATAGGTCTGCCCCCCCCAAATGTGGGGGGGCAGTGGCCCCCAAAAGGTTTCTTCGAGAGCACCTCTTAAAGCCTCTTAACAAACCCACCTCTCTTTTTAATGGATG]

[+] EMBL AK107732             [CAAAAACCCAAACCAAACGCGCGACGCCTCAGCTTTCTCCTGCTCCTCCTGCCACTCACCAACCCAACGCAAAGCATCGCGGCCGCGAGGTCGTCGACCTCGTCGTCGTCGTCGATGGAGGTGGAGGCGTTCCCGATACGGTTCACGAGGGGAATACGGTCGCACTGGGGGAGGCGCAAGTACCAGCGGCTGGAGGCGGCGAACGGCGGCGGGAAGACGAGGGCGACGCAGCAGCTGGGCGGCGCGCGCCGCGGCGGTGCGGGGTGGGGGCTGCGGCTGCGGCGGCTGCTCCGCGTCCGCGTGCGCGTGGCGAGGGCGTGGCTGTCGTCCCCGGCGCGGCTGCTGGCGCGGATCCGCGACGCGTACGTGGGCGGCATGCTCGCCGTGTCGAGGAAGGCGTCGGGCATGTCGCTGCCGAACGCGCCCGAGGGGCTGTGGCCTAGGCGCGTGCCGCGCCGGAAGCAGCTCCCGGCGGCGCGGCCAGGCCAGCTCACCGACTTCGAGCAGAGGCTCGTCGTCGAGATATACAAGTCCATCGTCGCCTCCAAGGAGCTCACCACCATGCTCCACCACTCCACCGCGCACCTGCCGCAGCAGCACAACACGGCGGCGCCGGCGTCCAGTGGCCAGCTGCTAGTCAATTAGCGTGCTGTCTGTATCCACCATCGACATGGGAACTGAACCGCGAGAGCTCCTGCAAGTTCGTTTGCTCGATCGCTGCTCATGTTGATGATTATTACTACTGCTGTTTCTTCCTTGTAATTTGTAAGAAGTATTAGTTAGGACAAGATGATGATGTACACTTCAATTTCTACCTGGTGCAAATCACCAT GCCGCCGCGAGTATGTTTAATTTCGTAACCAAGAAATCGATCAAGCAAAGTTCGTGCCT CCGCGCACC TTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AW155216             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGCGCGGCCAGGCCAGCTCACCGACTTCGAGCAGAGGCTCGTCGTCGAGATATACAAGTCCATCGTCGCCTCCAAGGAGCTCACCACCATGCTCCACCACTCCACCGCGCACCTGCCGCAGCAGCACAACACGGCGGCGCCGGCGTCCAGTGGCCAGCTGCTAGTCAATTAGCGTGCTGTCTGTATCCACCATCGACATGGAAACTGAACCGCGAGAGCTCCTGCAAGTTCGTTTGCTCGATCGCTGCTCATGTTGATGATTATTACTACTGCTGTTTCTTCCTTGTAATTTGTAAGAAGTATTAGTTAGGACAAGATGATGATGTACACTTCAATTTCTACCTGGTGCAAATCACCATGGCCGCCGCGAGTATGTTTAATTTCGTAACCAAGAAATCGATCAAGCAAAGTTCGTGCCTNNCGCGCACCNTTGTTCTTGTTAAAAAAAANAAAANANANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGGGGGGGCCGGACCCAATCGCCCTATGGGGAGCGATACGCCGCGCTAAGTGCCGCGTTTAACACGTCGGACTGAAAACCCCTGCGAACCACCTTATCGCCTGGAGAAATCCCCTTTGCCAGCTGCGAATACGAAAAGCCNACACGACGCTTTCCACAGTGCCAACCTAATGAAATGCACCCCCTTGCGGGCTATAACGGCGCGGTTGGGTCCCAAGGCCGTCATTGCAGCCTAGCCCGTCTTCGTTTTCTTTTTTCCAATTCGGGTCCGGGGTCTACAAGAATAAAGGGGCCTTGTGGCATAGGTCTGCCCCCCCCAAATGTGGGGGGGCAGTGGCCCCCAAAAGGTTTCTTCGAGAGCACCTCTTAAAGCCTCTTAACAAACCCACCTCTCTTTTTAATGGATG]


>consensus_2215#0 CAAAAACCCAAACCAAACGCGCGACGCCTCAGCTTTCTCCTGCTCCTCCTGCCACTCACC AACCCAACGCAAAGCATCGCGGCCGCGAGGTCGTCGACCTCGTCGTCGTCGTCGATGGAG GTGGAGGCGTTCCCGATACGGTTCACGAGGGGAATACGGTCGCACTGGGGGAGGCGCAAG TACCAGCGGCTGGAGGCGGCGAACGGCGGCGGGAAGACGAGGGCGACGCAGCAGCTGGGC GGCGCGCGCCGCGGCGGTGCGGGGTGGGGGCTGCGGCTGCGGCGGCTGCTCCGCGTCCGC GTGCGCGTGGCGAGGGCGTGGCTGTCGTCCCCGGCGCGGCTGCTGGCGCGGATCCGCGAC GCGTACGTGGGCGGCATGCTCGCCGTGTCGAGGAAGGCGTCGGGCATGTCGCTGCCGAAC GCGCCCGAGGGGCTGTGGCCTAGGCGCGTGCCGCGCCGGAAGCAGCTCCCGGCGGCGCGG CCAGGCCAGCTCACCGACTTCGAGCAGAGGCTCGTCGTCGAGATATACAAGTCCATCGTC GCCTCCAAGGAGCTCACCACCATGCTCCACCACTCCACCGCGCACCTGCCGCAGCAGCAC AACACGGCGGCGCCGGCGTCCAGTGGCCAGCTGCTAGTCAATTAGCGTGCTGTCTGTATC CACCATCGACATGGGAACTGAACCGCGAGAGCTCCTGCAAGTTCGTTTGCTCGATCGCTG CTCATGTTGATGATTATTACTACTGCTGTTTCTTCCTTGTAATTTGTAAGAAGTATTAGT TAGGACAAGATGATGATGTACACTTCAATTTCTACCTGGTGCAAATCACCATGCCGCCGC GAGTATGTTTAATTTCGTAACCAAGAAATCGATCAAGCAAAGTTCGTGCCTCCGCGCACC TTGTTCTTGTTAAAAAAAANAAAANANANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAACTCGAGGGGGGGCCGGACCCAATCGCCCTATGGGGAGCGATACGCCGCGCTAAGTG CCGCGTTTAACACGTCGGACTGAAAACCCCTGCGAACCACCTTATCGCCTGGAGAAATCC CCTTTGCCAGCTGCGAATACGAAAAGCCNACACGACGCTTTCCACAGTGCCAACCTAATG AAATGCACCCCCTTGCGGGCTATAACGGCGCGGTTGGGTCCCAAGGCCGTCATTGCAGCC TAGCCCGTCTTCGTTTTCTTTTTTCCAATTCGGGTCCGGGGTCTACAAGAATAAAGGGGC CTTGTGGCATAGGTCTGCCCCCCCCAAATGTGGGGGGGCAGTGGCCCCCAAAAGGTTTCT TCGAGAGCACCTCTTAAAGCCTCTTAACAAACCCACCTCTCTTTTTAATGGATG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)