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Oryza sativa
cluster # 226 cluster # 226       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_226#0 length = 1885 sequences # 1  
consensus_226#1 length = 1789 sequences # 1  

consensusID : consensus_226#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1885
fasta sequence
                              [CTCATCCCCTCTCTTCTCTGTATCTATCCACTCTCTCCCAAAGGATCAGCCGAGCAGAGGGGAGCGGAGCAGTGCCGCCGCCGCTGGCGACGAGGCCTGGGTGGATGACCGAGAGGAAGGGGCGCGGGTGTCGGCGAGGCCCCACGCGAGCTCGGCGAGCTCGACGGGCGACATCACGTCAGGCTCCCAAAGCTGACGTACAGCACCGACCCGGTCGGCTGCTCGTCAAGCCAAGCCATGCACGCGGCGTCCTCTTCCCACAGGCTCAGCCCAGCGGCGCCGCCGCCGACTAGGTTGTTCGCGCGGTCGGCGCCGAGCGGGCCGATGGTGTACACGCGCGGGAACTCGTCCCTGAGCACGTCGAAGACGTCGGACTCGAGGTCGTCGAACGTACGTGTTGAGGATGAGCCCCGGCGCCCTGGCGCAGCTGTTCGCCTCGTCCTCGTCCACGCGTAGTGCGAAGCTGGTCGGGTCGAGCGTGCGAACGAAGCTGCAGACGTCGCCGAGACGCACCGTCGGCACGCCGGCGATCCAGTCTATCGGCGTGTCCAGGTAACTGTTCGTAAGGTAGCTCTCGTCTGCCATGGCAGGGGAAGCAAAAGCAAAGGATTTAGTCCATCGCATACAATATAGCACGCGCCAAGTGTGCAAGCACGTGTGACAACAAACACATCCATGGCGATATCGATCATACACGTGCGACGGAGTGATCGCTCACCGGACGAAACGGACCTTTGAGCGAATGAGCGGCGTGTACCCTCTCTGCCGTAGCTGGCGAAGCCGGAGCGTGCACGCGAAGCCGCAGGCGCTGGTGCCCCAGAGCACGAACGCCGGCACGCCGAGCTCCTCCGCGACGTCGAGCGCGAAGCTGACGAGGCCACTGAGCACGACGCATGTCACGGGCAGCACACCGCTGCTGCCGTCGCTCGCCACCCTCCTCGCAACCTCCACCAGCATCGCGCGCAGCTCCTCCGCAACGACAGGTACAGCCTCACCGTGCTGTCCGGCACCGCCTCGAACCGGAACCCGTCCCGCCCACGCAGCGCCCCGCCGCCGCCGCAGCCGCTCGTGGTTGTGCTCCGTGTTGACGAACGTGACGGGCACCCTGCGCGAGTGCAGCAGCTCGGCCAGCTTCAACGTCGGGTTGATGTGCCCTGAGCACGGGAACGGGAACAGTATCGCGTGCGCTCTCCTCCCCTCTCCCATGGCCAGCGCCAACAACAACGACGAGGACGAGGACGAGGACGAGGAGGAGTCGCACATGGGAACAGGAGTACGCGGCTGCTGTGGAGCGGCGGCGCACGAAGTTGGTGGGATGGAGCGGAGCGGCGACGGGCGGAGTGGAGCGACGGCGAGGCGGAGCAGCGGCGGGTGGAGTGAAGTGACGGCAAGAAGGAGCGGCGGTGCATGAAGTCGCCGAACTCGACTCCCTCTCGGGGACGCTGCTCGCCGCACCGTCCCCGCCCTTCCCGGCGCCCTCCAACCTGCTCGCCGTCCTCCGCACCCCGTCTCCGCCATCCACCGCGCCGCCCTCCAACCTCGACGGCGTGCTCGCCATGGGCGGCGGCTCGCCGTGCTATCCCCTTGACATGGGCAGATGCACGCGCCAGCTGCTCCCCAACCGCCCGCGCGCCGCTTCTCCGCCGCCGGCCGCCGTCGTGGCGCTGCCCTCCTCGCGGCGTCAGATGAGGAGAGAGAGAGAGTAGGAAGGGAGAGAGATTGACGTGGCATCCTAAATGTGGGTCCCACATTGACTCAGCCGCCGACAAAACCGGAGCCAAAAACATCAAAGGAACTATCGTGACCAGTTTTAATTAGTTGAGGGACGCAACATATCTCGTTTTGTGGTTGGGGGATGATTTTGTAACTCGATGACAAGTTGAGG]

[+] EMBL AK102386             [CTCATCCCCTCTCTTCTCTGTATCTATCCACTCTCTCCCAAAGGATCAGCCGAGCAGAGGGGAGCGGAGCAGTGCCGCCGCCGCTGGCGACGAGGCCTGGGTGGATGACCGAGAGGAAGGGGCGCGGGTGTCGGCGAGGCCCCACGCGAGCTCGGCGAGCTCGACGGGCGACATCACGTCAGGCTCCCAAAGCTGACGTACAGCACCGACCCGGTCGGCTGCTCGTCAAGCCAAGCCATGCACGCGGCGTCCTCTTCCCACAGGCTCAGCCCAGCGGCGCCGCCGCCGACTAGGTTGTTCGCGCGGTCGGCGCCGAGCGGGCCGATGGTGTACACGCGCGGGAACTCGTCCCTGAGCACGTCGAAGACGTCGGACTCGAGGTCGTCGAACGTACGTGTTGAGGATGAGCCCCGGCGCCCTGGCGCAGCTGTTCGCCTCGTCCTCGTCCACGCGTAGTGCGAAGCTGGTCGGGTCGAGCGTGCGAACGAAGCTGCAGACGTCGCCGAGACGCACCGTCGGCACGCCGGCGATCCAGTCTATCGGCGTGTCCAGGTAACTGTTCGTAAGGTAGCTCTCGTCTGCCATGGCAGGGGAAGCAAAAGCAAAGGATTTAGTCCATCGCATACAATATAGCACGCGCCAAGTGTGCAAGCACGTGTGACAACAAACACATCCATGGCGATATCGATCATACACGTGCGACGGAGTGATCGCTCACCGGACGAAACGGACCTTTGAGCGAATGAGCGGCGTGTACCCTCTCTGCCGTAGCTGGCGAAGCCGGAGCGTGCACGCGAAGCCGCAGGCGCTGGTGCCCCAGAGCACGAACGCCGGCACGCCGAGCTCCTCCGCGACGTCGAGCGCGAAGCTGACGAGGCCACTGAGCACGACGCATGTCACGGGCAGCACACCGCTGCTGCCGTCGCTCGCCACCCTCCTCGCAACCTCCACCAGCATCGCGCGCAGCTCCTCCGCAACGACAGGTACAGCCTCACCGTGCTGTCCGGCACCGCCTCGAACCGGAACCCGTCCCGCCCACGCAGCGCCCCGCCGCCGCCGCAGCCGCTCGTGGTTGTGCTCCGTGTTGACGAACGTGACGGGCACCCTGCGCGAGTGCAGCAGCTCGGCCAGCTTCAACGTCGGGTTGATGTGCCCTGAGCACGGGAACGGGAACAGTATCGCGTGCGCTCTCCTCCCCTCTCCCATGGCCAGCGCCAACAACAACGACGAGGACGAGGACGAGGACGAGGAGGAGTCGCACATGGGAACAGGAGTACGCGGCTGCTGTGGAGCGGCGGCGCACGAAGTTGGTGGGATGGAGCGGAGCGGCGACGGGCGGAGTGGAGCGACGGCGAGGCGGAGCAGCGGCGGGTGGAGTGAAGTGACGGCAAGAAGGAGCGGCGGTGCATGAAGTCGCCGAACTCGACTCCCTCTCGGGGACGCTGCTCGCCGCACCGTCCCCGCCCTTCCCGGCGCCCTCCAACCTGCTCGCCGTCCTCCGCACCCCGTCTCCGCCATCCACCGCGCCGCCCTCCAACCTCGACGGCGTGCTCGCCATGGGCGGCGGCTCGCCGTGCTATCCCCTTGACATGGGCAGATGCACGCGCCAGCTGCTCCCCAACCGCCCGCGCGCCGCTTCTCCGCCGCCGGCCGCCGTCGTGGCGCTGCCCTCCTCGCGGCGTCAGATGAGGAGAGAGAGAGAGTAGGAAGGGAGAGAGATTGACGTGGCATCCTAAATGTGGGTCCCACATTGACTCAGCCGCCGACAAAACCGGAGCCAAAAACATCAAAGGAACTATCGTGACCAGTTTTAATTAGTTGAGGGACGCAACATATCTCGTTTTGTGGTTGGGGGATGATTTTGTAACTCGATGACAAGTTGAGG]


>consensus_226#0 CTCATCCCCTCTCTTCTCTGTATCTATCCACTCTCTCCCAAAGGATCAGCCGAGCAGAGG GGAGCGGAGCAGTGCCGCCGCCGCTGGCGACGAGGCCTGGGTGGATGACCGAGAGGAAGG GGCGCGGGTGTCGGCGAGGCCCCACGCGAGCTCGGCGAGCTCGACGGGCGACATCACGTC AGGCTCCCAAAGCTGACGTACAGCACCGACCCGGTCGGCTGCTCGTCAAGCCAAGCCATG CACGCGGCGTCCTCTTCCCACAGGCTCAGCCCAGCGGCGCCGCCGCCGACTAGGTTGTTC GCGCGGTCGGCGCCGAGCGGGCCGATGGTGTACACGCGCGGGAACTCGTCCCTGAGCACG TCGAAGACGTCGGACTCGAGGTCGTCGAACGTACGTGTTGAGGATGAGCCCCGGCGCCCT GGCGCAGCTGTTCGCCTCGTCCTCGTCCACGCGTAGTGCGAAGCTGGTCGGGTCGAGCGT GCGAACGAAGCTGCAGACGTCGCCGAGACGCACCGTCGGCACGCCGGCGATCCAGTCTAT CGGCGTGTCCAGGTAACTGTTCGTAAGGTAGCTCTCGTCTGCCATGGCAGGGGAAGCAAA AGCAAAGGATTTAGTCCATCGCATACAATATAGCACGCGCCAAGTGTGCAAGCACGTGTG ACAACAAACACATCCATGGCGATATCGATCATACACGTGCGACGGAGTGATCGCTCACCG GACGAAACGGACCTTTGAGCGAATGAGCGGCGTGTACCCTCTCTGCCGTAGCTGGCGAAG CCGGAGCGTGCACGCGAAGCCGCAGGCGCTGGTGCCCCAGAGCACGAACGCCGGCACGCC GAGCTCCTCCGCGACGTCGAGCGCGAAGCTGACGAGGCCACTGAGCACGACGCATGTCAC GGGCAGCACACCGCTGCTGCCGTCGCTCGCCACCCTCCTCGCAACCTCCACCAGCATCGC GCGCAGCTCCTCCGCAACGACAGGTACAGCCTCACCGTGCTGTCCGGCACCGCCTCGAAC CGGAACCCGTCCCGCCCACGCAGCGCCCCGCCGCCGCCGCAGCCGCTCGTGGTTGTGCTC CGTGTTGACGAACGTGACGGGCACCCTGCGCGAGTGCAGCAGCTCGGCCAGCTTCAACGT CGGGTTGATGTGCCCTGAGCACGGGAACGGGAACAGTATCGCGTGCGCTCTCCTCCCCTC TCCCATGGCCAGCGCCAACAACAACGACGAGGACGAGGACGAGGACGAGGAGGAGTCGCA CATGGGAACAGGAGTACGCGGCTGCTGTGGAGCGGCGGCGCACGAAGTTGGTGGGATGGA GCGGAGCGGCGACGGGCGGAGTGGAGCGACGGCGAGGCGGAGCAGCGGCGGGTGGAGTGA AGTGACGGCAAGAAGGAGCGGCGGTGCATGAAGTCGCCGAACTCGACTCCCTCTCGGGGA CGCTGCTCGCCGCACCGTCCCCGCCCTTCCCGGCGCCCTCCAACCTGCTCGCCGTCCTCC GCACCCCGTCTCCGCCATCCACCGCGCCGCCCTCCAACCTCGACGGCGTGCTCGCCATGG GCGGCGGCTCGCCGTGCTATCCCCTTGACATGGGCAGATGCACGCGCCAGCTGCTCCCCA ACCGCCCGCGCGCCGCTTCTCCGCCGCCGGCCGCCGTCGTGGCGCTGCCCTCCTCGCGGC GTCAGATGAGGAGAGAGAGAGAGTAGGAAGGGAGAGAGATTGACGTGGCATCCTAAATGT GGGTCCCACATTGACTCAGCCGCCGACAAAACCGGAGCCAAAAACATCAAAGGAACTATC GTGACCAGTTTTAATTAGTTGAGGGACGCAACATATCTCGTTTTGTGGTTGGGGGATGAT TTTGTAACTCGATGACAAGTTGAGG



consensusID : consensus_226#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1789
fasta sequence
                              [CTACTCTCTCTTCAATCAGCATACAGTTTTAACTAAACAAACCACTGCATTAAGAAAACGTTGTACCGCTATCACTCCTGTCGCTAAAAATCATATCCAAGAACCAGATAAGAACTGAACAACTGCGACTCTGCAACTGCAAGAAATGAAAAGAAGAAGAAAAAAAAAAGAAAAGGAGAAACATCCAAAGTGCATTTTGCACATGCGTCCGATGAGTGAGCCAGCCAGCCGAACTGCCGAACTTGTCACGACGATGACGTGTACGCGTGTGTGCCATGTCGTCACTGACCCAGCCGCAGCTGCTCGACCAGCTTGTCGAGGCCGCCGTACGACGAGCCGCCCTTCGCCGTCGCCGCCTCCGCCGCCGCCTTCCACCTGGCGGCGTTGCGCCTCATTTCCTTGCCCCTGTCGCCGCCGCCGCCGCCGCCTCCCATGAGCTTCTCGACGTGGGCGGCGACCTGCTCGCGGCGGAGCTCCTCGTCGAGGCGGAGCCCGATGCCCCACTCGTCGCGCACGTACCGCGAGTTGATGTACTGGTCGGCGAACCCCGGCCAGCAGATCATCGGCACGCCGGCGCAGATGCTCTCCGTCGTCGAGTTCCACCCGCTGTGCGTGAGGAACCCGCCGACGGCGCGGTGCCGGAGCACCTCCTCCTGCGCGCACCACTCGGCGATGAAGCACCGGCCCTTCGTCTCCGCGACGAACCCATCTGGCAACGCGTTGGTCACGACGTCGTGGTCGCCGGCGCCGGCGCCGGCGATGAGGCCTGGGCGGATGACCCAGAGGAAGGTGCGGCGGGTGTCGGCGAGGCCCCACGCGAGCTCGGCGAGCTCCTCCGGCGACATCACGGTCAGGCTCCCGAAGCTGACGTACAGCACCGACCCGGCCGGCTGCGCATCGAGCCACGCCATGCACGCCGCGTCCTCCTCCCACAGGCTCAGTCCGCCGTTCGCGCGGTCGGCGGCGAGGGGCCCGACGGTGTACACGCGCGGGAACTCGTCCCTGAGCGCGTCGAGCACGTCGGACTCGAGGTCGTCGAACGTGTTGAGGATGAGGCCCTGCGCCCTGGCACAGCTGTTCGCCTCGTCCTCCTCCACGCGCAGCGCGAAGCTGGTCGGGTCGAGCGTGCGGACGAAGCTGGAGACGTCGCCGAGACGCACCGTCGGCACGCCGGCGATCCAGTCGATCGGCGTGTCCAGGTAACCGTTCGTCAGGTAGCTCTCGTCTTTGAGCGGCGTGTACCCTCTCTGCCGGAGCTGGCGAAGCCGGAGCGTGCACGCGAAGCCGCAGGCGCTGGTGCCCCAGAGCACGAACGCCGGCACGCCGAGCTCCTCCGCGACGTCGAGCGCGAAGCTGACGAGGCCACTGAGCACGACGCAGGTCACGGGCGGCACGCCGCCGCCGCTCGCCACCCTCCTCGCGACCTCCACCAGCGGCGCGCCGCAGCTCCTCCGCAGCGACAGGTACAGCCTCACCGTGCTGTCCGGCGCGGCGCGCTCGTCGTCGCGCAGCCCGTCGGGCACCGCCTCGAACCGGAACCCCTCCCGCCCGCGCAGCGCCCCGCCGCCGCTGCGCCGCCGCAGCAGGCGCTCGTGGTTGTGCTCCGTGTTGACGAACGTGACGTGCACCCCGCGCGAGTGCAGCAGCTCGGCCAGCTTCAGCGTCGGGTTGATGTGCCCCGAGCACGGGAACGGGAACAGCATCGCGTGCGCCGCCCTCCTCATCCTCTCTCCCATGGCCAACGCCAACGACAACGACGAACACGACGAGGACGAGGGGGAGTCGCACA]

[-] EMBL AK063324             [CTACTCTCTCTTCAATCAGCATACAGTTTTAACTAAACAAACCACTGCATTAAGAAAACGTTGTACCGCTATCACTCCTGTCGCTAAAAATCATATCCAAGAACCAGATAAGAACTGAACAACTGCGACTCTGCAACTGCAAGAAATGAAAAGAAGAAGAAAAAAAAAAGAAAAGGAGAAACATCCAAAGTGCATTTTGCACATGCGTCCGATGAGTGAGCCAGCCAGCCGAACTGCCGAACTTGTCACGACGATGACGTGTACGCGTGTGTGCCATGTCGTCACTGACCCAGCCGCAGCTGCTCGACCAGCTTGTCGAGGCCGCCGTACGACGAGCCGCCCTTCGCCGTCGCCGCCTCCGCCGCCGCCTTCCACCTGGCGGCGTTGCGCCTCATTTCCTTGCCCCTGTCGCCGCCGCCGCCGCCGCCTCCCATGAGCTTCTCGACGTGGGCGGCGACCTGCTCGCGGCGGAGCTCCTCGTCGAGGCGGAGCCCGATGCCCCACTCGTCGCGCACGTACCGCGAGTTGATGTACTGGTCGGCGAACCCCGGCCAGCAGATCATCGGCACGCCGGCGCAGATGCTCTCCGTCGTCGAGTTCCACCCGCTGTGCGTGAGGAACCCGCCGACGGCGCGGTGCCGGAGCACCTCCTCCTGCGCGCACCACTCGGCGATGAAGCACCGGCCCTTCGTCTCCGCGACGAACCCATCTGGCAACGCGTTGGTCACGACGTCGTGGTCGCCGGCGCCGGCGCCGGCGATGAGGCCTGGGCGGATGACCCAGAGGAAGGTGCGGCGGGTGTCGGCGAGGCCCCACGCGAGCTCGGCGAGCTCCTCCGGCGACATCACGGTCAGGCTCCCGAAGCTGACGTACAGCACCGACCCGGCCGGCTGCGCATCGAGCCACGCCATGCACGCCGCGTCCTCCTCCCACAGGCTCAGTCCGCCGTTCGCGCGGTCGGCGGCGAGGGGCCCGACGGTGTACACGCGCGGGAACTCGTCCCTGAGCGCGTCGAGCACGTCGGACTCGAGGTCGTCGAACGTGTTGAGGATGAGGCCCTGCGCCCTGGCACAGCTGTTCGCCTCGTCCTCCTCCACGCGCAGCGCGAAGCTGGTCGGGTCGAGCGTGCGGACGAAGCTGGAGACGTCGCCGAGACGCACCGTCGGCACGCCGGCGATCCAGTCGATCGGCGTGTCCAGGTAACCGTTCGTCAGGTAGCTCTCGTCTTTGAGCGGCGTGTACCCTCTCTGCCGGAGCTGGCGAAGCCGGAGCGTGCACGCGAAGCCGCAGGCGCTGGTGCCCCAGAGCACGAACGCCGGCACGCCGAGCTCCTCCGCGACGTCGAGCGCGAAGCTGACGAGGCCACTGAGCACGACGCAGGTCACGGGCGGCACGCCGCCGCCGCTCGCCACCCTCCTCGCGACCTCCACCAGCGGCGCGCCGCAGCTCCTCCGCAGCGACAGGTACAGCCTCACCGTGCTGTCCGGCGCGGCGCGCTCGTCGTCGCGCAGCCCGTCGGGCACCGCCTCGAACCGGAACCCCTCCCGCCCGCGCAGCGCCCCGCCGCCGCTGCGCCGCCGCAGCAGGCGCTCGTGGTTGTGCTCCGTGTTGACGAACGTGACGTGCACCCCGCGCGAGTGCAGCAGCTCGGCCAGCTTCAGCGTCGGGTTGATGTGCCCCGAGCACGGGAACGGGAACAGCATCGCGTGCGCCGCCCTCCTCATCCTCTCTCCCATGGCCAACGCCAACGACAACGACGAACACGACGAGGACGAGGGGGAGTCGCACA]


>consensus_226#1 CTACTCTCTCTTCAATCAGCATACAGTTTTAACTAAACAAACCACTGCATTAAGAAAACG TTGTACCGCTATCACTCCTGTCGCTAAAAATCATATCCAAGAACCAGATAAGAACTGAAC AACTGCGACTCTGCAACTGCAAGAAATGAAAAGAAGAAGAAAAAAAAAAGAAAAGGAGAA ACATCCAAAGTGCATTTTGCACATGCGTCCGATGAGTGAGCCAGCCAGCCGAACTGCCGA ACTTGTCACGACGATGACGTGTACGCGTGTGTGCCATGTCGTCACTGACCCAGCCGCAGC TGCTCGACCAGCTTGTCGAGGCCGCCGTACGACGAGCCGCCCTTCGCCGTCGCCGCCTCC GCCGCCGCCTTCCACCTGGCGGCGTTGCGCCTCATTTCCTTGCCCCTGTCGCCGCCGCCG CCGCCGCCTCCCATGAGCTTCTCGACGTGGGCGGCGACCTGCTCGCGGCGGAGCTCCTCG TCGAGGCGGAGCCCGATGCCCCACTCGTCGCGCACGTACCGCGAGTTGATGTACTGGTCG GCGAACCCCGGCCAGCAGATCATCGGCACGCCGGCGCAGATGCTCTCCGTCGTCGAGTTC CACCCGCTGTGCGTGAGGAACCCGCCGACGGCGCGGTGCCGGAGCACCTCCTCCTGCGCG CACCACTCGGCGATGAAGCACCGGCCCTTCGTCTCCGCGACGAACCCATCTGGCAACGCG TTGGTCACGACGTCGTGGTCGCCGGCGCCGGCGCCGGCGATGAGGCCTGGGCGGATGACC CAGAGGAAGGTGCGGCGGGTGTCGGCGAGGCCCCACGCGAGCTCGGCGAGCTCCTCCGGC GACATCACGGTCAGGCTCCCGAAGCTGACGTACAGCACCGACCCGGCCGGCTGCGCATCG AGCCACGCCATGCACGCCGCGTCCTCCTCCCACAGGCTCAGTCCGCCGTTCGCGCGGTCG GCGGCGAGGGGCCCGACGGTGTACACGCGCGGGAACTCGTCCCTGAGCGCGTCGAGCACG TCGGACTCGAGGTCGTCGAACGTGTTGAGGATGAGGCCCTGCGCCCTGGCACAGCTGTTC GCCTCGTCCTCCTCCACGCGCAGCGCGAAGCTGGTCGGGTCGAGCGTGCGGACGAAGCTG GAGACGTCGCCGAGACGCACCGTCGGCACGCCGGCGATCCAGTCGATCGGCGTGTCCAGG TAACCGTTCGTCAGGTAGCTCTCGTCTTTGAGCGGCGTGTACCCTCTCTGCCGGAGCTGG CGAAGCCGGAGCGTGCACGCGAAGCCGCAGGCGCTGGTGCCCCAGAGCACGAACGCCGGC ACGCCGAGCTCCTCCGCGACGTCGAGCGCGAAGCTGACGAGGCCACTGAGCACGACGCAG GTCACGGGCGGCACGCCGCCGCCGCTCGCCACCCTCCTCGCGACCTCCACCAGCGGCGCG CCGCAGCTCCTCCGCAGCGACAGGTACAGCCTCACCGTGCTGTCCGGCGCGGCGCGCTCG TCGTCGCGCAGCCCGTCGGGCACCGCCTCGAACCGGAACCCCTCCCGCCCGCGCAGCGCC CCGCCGCCGCTGCGCCGCCGCAGCAGGCGCTCGTGGTTGTGCTCCGTGTTGACGAACGTG ACGTGCACCCCGCGCGAGTGCAGCAGCTCGGCCAGCTTCAGCGTCGGGTTGATGTGCCCC GAGCACGGGAACGGGAACAGCATCGCGTGCGCCGCCCTCCTCATCCTCTCTCCCATGGCC AACGCCAACGACAACGACGAACACGACGAGGACGAGGGGGAGTCGCACA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_226#0      CTCATCCCCTCTCTTCTCTGTATCTATCCACTCTCTCCCAAAGGATCAGCCGAGCAGAGG 60
consensus_226#1      -----CTACTCTCTCTTCAATCAGCATACAGTTTTAACTAAACAAACCACTGCATTAAGA 55
                          *  ******  **  *    ** ** * *   * ***  * *  * *     ** 

consensus_226#0      GGAGCGGAGCAGTGCCGCCGCCGCTGGCGACGAGGCCTGGGTGGATGACCGAGAGGAAG- 119
consensus_226#1      AAA-CGTTGTACCGCTATCACTCCTGTCGCTAAAAATCATATCCAAGAACCAGATAAGAA 114
                       * **  * *  **   * *  *** **   *        *  * ** * ***  *   

consensus_226#0      --GGGCGCGGGTGTCGGCGAGGCCCCACGCGA-GCTCGGCGAGCTCGACGGGCGACATCA 176
consensus_226#1      CTGAACAACTGCGACTCTGCAACTGCAAGAAATGAAAAGAAGAAGAAAAAAAAAAGAAAA 174
                       *  *    * * *   *   *  ** *  * *    *        *      * *  *

consensus_226#0      CGTCAGGCTCCCAAAGCTGACGTACAGCACCGACCCGGTCGGCTGCTCGTCAAGCCAAGC 236
consensus_226#1      GGAGAAACATCCAAAGTGCATTTTGCACATGCGTCCGATGAGTGAGCCAGCCAGCCGAAC 234
                      *  *  *  ******   *  *    **     *** *  *     *  * **** * *

consensus_226#0      CAT-GCACGCGGCGTCCTCTTCCCACAGGCTCAGCCCAGCGGCGCCGCCGCCGACTAGGT 295
consensus_226#1      TGCCGAACTTGTCACGACGATGACGTGTACGCGTGTGTGCCATGTCGTCACTGACCCAGC 294
                         * **  * *       *  *     * *      **   * ** * * ***   * 

consensus_226#0      TGTTCGCGCGGTCGGCGCCGAGCGGGCCGATGGTGTACACGCGCGGGAACTCGTCCCTGA 355
consensus_226#1      ------CGCAGCTGCT--CGACCAGCTTGTCGAGGCCGCCGTACGACGAGCCGCCCTT-- 344
                           *** *  *    *** * *   *  *  *    **  **   *  ** ** *  

consensus_226#0      GCACGTCGAAGACGTCGGACTCGAGGTCGTCGAACGTACG-TGTTGAGGATGAGCCCCGG 414
consensus_226#1      ---CGCCGTCGCCGCCTCCGCCGCCGCCTTCCACCTGGCGGCGTTGCGCCTCATTTCCTT 401
                        ** **  * ** *     **  * * ** * *   **  **** *  * *   **  

consensus_226#0      CGCCCTGGCGCAGCTGTTCGCCTCGTCCTCGTCCACGCGTAGTGCGAAGCTGGTCGGGTC 474
consensus_226#1      GCCCCTGTCGCCGCCGC-CGCCGCCGCCTC--CCATGAGCTTCTCGACGTGGGCGGCGAC 458
                       ***** *** ** *  **** *  ****  *** * *     *** *  **  * * *

consensus_226#0      GAGCGTGCGAACGAAGCTGCAGACGTCGCCGAGACGCACCGTCGGCACGCCGGCGATCCA 534
consensus_226#1      CTGCTCGCGG-CGGAGCTCC-----TCGTCGAGGCGGAGC-CCGATGCCCCACTCGTCGC 511
                       **  ***  ** **** *     *** **** ** * *  **   * **     **  

consensus_226#0      GTCTAT-CGGCGTGTCCAGGTAACTGTTCGTAAGGTAGCTCTCGTCTGCCATGGCAGGGG 593
consensus_226#1      GCACGTACCGCGAGTTGATGTA-CTGGTCG----GCGAACCCCGGCCAGCAGATCATCGG 566
                     *    * * *** **  * *** *** ***    *     * ** *   **   **  **

consensus_226#0      AA-GCAAAAGCAAAGGATTTAGTCCATCGCATACAATATAGCACGCGCCAAGTGTGCAAG 652
consensus_226#1      CACGCCGGCGCAGATGCTCTCCGTCGTCGAGTTCCACCCGCTGTGCGTGAGGAACCCGCC 626
                      * **    *** * * * *    * ***  * * *        ***  * *    *   

consensus_226#0      CACG-TGTGACAACAAACACATCCATGGCGATATCGATCATACACGTGCGACGGAGTGAT 711
consensus_226#1      GACGGCGCGGTGCCGGA-GCACCTCCTCCTGCGCGCACCACTCGGCGATGAAGCACCGGC 685
                      ***  * *    *  *  ** *     *       * **  *      ** * *  *  

consensus_226#0      CGCTCACCGGACGAAACGGACCTTTGAGCGAATGAGCGGCGTGTACCCTCTCTGCCGTAG 771
consensus_226#1      CCTTCGTCTC-CGCGACGAACCCATCTGGCAACGCGT------TGGTCACGACGTCGTGG 738
                     *  **  *   **  *** ***  *  *  ** * *       *   * *   * *** *

consensus_226#0      CTGGCGAAGCCGGAGCGTGCACGCGAAGCCGCAGGCGCTGGTGCCCCAGAGCACGAACGC 831
consensus_226#1      TCGCCGGCGCCGGCGCCGGCG-ATGAGGCC-TGGGCG--GATGACCCAGAG---GAA--- 788
                       * **  ***** **  **    ** ***   ****  * ** *******   ***   

consensus_226#0      CGGCACGCCGAGCTCCTCCGCGACGTCGAGCGCGAAGCTGACGAGGCCACTGAGCACGAC 891
consensus_226#1      -GGTGCGGCGGGT--GTCGGCGAGGCCCCACGCGAGCTCGGCGAGCTCCTCCGGCG---- 841
                      **  ** ** *    ** **** * *   *****    * ****  *     **     

consensus_226#0      GCATGTCACGGGCAGCACACCGCTGCTGCCGTCGCTCGCC-ACCCTCCTCGCAACC--TC 948
consensus_226#1      --ACATCACGGTCAGGCTCCCGAAGCTGACGTACAGCACCGACCCGGCCGGCTGCGCATC 899
                       *  ****** ***    ***  **** ***    * ** ****  *  **  *   **

consensus_226#0      CACCAGCATCGCGCGCAGCTCCTCCGCAACG-ACAGGTACAGCCTCACCGTGCTGTCCGG 1007
consensus_226#1      GAGCCACGCCATGCACGCCGCGTCCTCCTCCCACAGGCTCAGTC-CGCCGTTCGCGCGGT 958
                      * *  *  *  ** *  * * *** *  *  *****  *** * * **** *   * * 

consensus_226#0      CACCGCCTCGAACCGGAACCCGTCCCGCCCACGCAGCGCCCCGCCGCCGCCGCAGCCGCT 1067
consensus_226#1      CGGCGGCGAGGGGCCCGA--CGGTGTACACGCGCGGGAACTCGTCCCTGAGCGCGTCGAG 1016
                     *  ** *  *   *   *  **     * * *** *   * ** * * *     * **  

consensus_226#0      CGTGGTTGTGCTCCGTGTTGACGAACGTGACGGGCACCCTGCGCGAGTGCAGCAGCTCGG 1127
consensus_226#1      CACG-TCGGACTCGAGGTCGTCGAACGTGTTGAGGATGAGGC-CCTGCGCCCTGGCACAG 1074
                     *  * * *  ***   ** * ********  * * *    ** *  * **    ** * *

consensus_226#0      CCAGCTTCAACGTCGGGTTG-ATGTGCCCTGAGCACGGGAACGGGAACAGTATCGCGTGC 1186
consensus_226#1      CTGTTCGCCTCGTCCTCCTCCACGCGCAGCGCGAAGCTGGTCGGGTCGAGCGT-GCGGAC 1133
                     *      *  ****    *  * * **   * * *   *  ****   **  * ***  *

consensus_226#0      GCT-CTCCTCCCCTCTCCCATGGCCAGCGCCAACAACAACGACGAGGACGAGGACGAGGA 1245
consensus_226#1      GAAGCTGGAGACGTCGCCGAGACGCACCGTCGGCA-CGCCGGCGATCCAGTCGATCGGCG 1192
                     *   **     * ** ** *    ** ** *  ** *  ** ***    *  **   *  

consensus_226#0      CGAGGAGG-AGTCGCACAT--GGGAACAGGAGTACGCGGCTGCTGTGGAGCGGCGGCGCA 1302
consensus_226#1      TGTCCAGGTAACCGTTCGTCAGGTAGCTCTCGTCTTTGAGCGGCGTGTACCCTCTCTGC- 1251
                      *   *** *  **  * *  ** * *    **    *   *  *** * *  *   ** 

consensus_226#0      CGAAGTTGGTGGGAT-GGAGCGGAGCGGCGACGGGCGGAGTGGAGCGACGGCGAGGCG-G 1360
consensus_226#1      CGGAGCTGGCGAAGCCGGAGCGTGCACGCGAAGCCGCAGGCGCTGGTGCCCCAGAGCACG 1311
                     ** ** *** *     ******     **** *      * *  *   *  *   **  *

consensus_226#0      AGCAGCGGCGGGTGGAGTGAAGTGACGGCAAGAAGGAGCGGCGGTGCATGAAGTCGCCGA 1420
consensus_226#1      AACGCCGGCACGCCGAGCTCCTCCGCGACGTCGAGC-GCGAAGCTG-ACGAGGCCACTGA 1369
                     * *  ****  *  ***        ** *    **  ***  * ** * ** * * * **

consensus_226#0      ACTCGACTCCCTCTCGGGGACGCTGCTCGCCGC-ACCGTCCCCGCCCTTCCCGGCGCCCT 1479
consensus_226#1      GCACGACGCAGG-TCACGGGCG--GCACGCCGCCGCCGCTCGCCACCCTCCTCGCGACCT 1426
                      * **** *    **  ** **  ** ******  ***  * *  ** ***  *** ***

consensus_226#0      CCAACCTGCTCGCCGTCCTCCGCACCCCGTCTCCGCCATCCACCGCGCCGCCCTCCAACC 1539
consensus_226#1      CCA--CCAGCGGCGCGCCGCAGCTCCTCCGCAGCGACAGGTACAGCCTCACCGTGCTGTC 1484
                     ***  *     **   ** * ** ** *  *  ** **   ** **  * ** * *   *

consensus_226#0      TCG-ACGGCGTGCTCGCCATGGGCGGCGGCTCGCCGTGCTATCCCCTTGACATGGGCAGA 1598
consensus_226#1      CGGCGCGGCGCGCTCGTCGTCGC--GCAGCCCGTCGGGC-ACCGCCTCGAACCGGAACCC 1541
                       *  ***** ***** * * *   ** ** ** ** ** * * *** **   **     

consensus_226#0      TGCACGCGCCAGCTGCTCCCCAACCGCCCGCGCGCCGCTTCTCCGCCGCCGGCCGCCGTC 1658
consensus_226#1      CTCCCGCCCGCGCAGCGCCCCG-CCGCCGCTGCGCCGC-----CGCAGCAGGCGCTCGTG 1595
                       * *** *  ** ** ****  *****   *******     *** ** ***   *** 

consensus_226#0      GTGGCGCTGCCCTCCTCGCGG-CGTCAGATGAGGAGAGAGAGAGAGTAGGAAGGGAGAGA 1717
consensus_226#1      GTTGTGCT-CCGTGTTGACGAACGTGACGTGCACCCCGCGCGAGTGCAGCAGCTCGGCCA 1654
                     ** * *** ** *  *  **  *** *  **      * * *** * ** *     *  *

consensus_226#0      GATTGACGTGGCATCCTAAATGTGGGTCCCACATTGACTCAGCCGCCGACAAAACCGGAG 1777
consensus_226#1      GCTTCA-GCGTCGGGTTGA-TGTGCCCCGAGCACGGGAACGGGAACAG-CATCGCGTGCG 1711
                     * ** * * * *    * * ****   *   **  *   * *   * * **   *  * *

consensus_226#0      CCAAAAACATCAAAGGAACTATCGTGACCAGTTTTAATTAGTTGAGGGACGCAACATATC 1837
consensus_226#1      CCGCCCTCCTCATCCTCTCTCCCATGGCCAACGCCAACGAC---AACGACG-AACACGAC 1767
                     **     * ***      **  * ** ***     **  *    *  **** ****   *

consensus_226#0      TCGTTTTGTGGTTGGGGGATGATTTTGTAACTCGATGACAAGTTGAGG 1885
consensus_226#1      -------GAGGACGAGGGGGAGTCGCACA------------------- 1789
                            * **  * ***    *     *                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)