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Oryza sativa
cluster # 2267 cluster # 2267       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2267#0 length = 2627 sequences # 2  

consensusID : consensus_2267#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2627
fasta sequence
                              [AGGGCTCGGCTCCACACGAACGCGACGCGGCGGCCGCCACCGATTCCATCCGGAGGAAGGAGCCGCGCCGCCTCCTTCCTATATCCCTCCTCCTCTCCCGTCCTAAACCCTAGCCGCGACCGCGAGTTCGGGGTCCTAATCCGGATCGACTCCGCCTCCCCGAGTCGCTCGGACGCGTTCTTCTTCCGGGTTTGACTTTGTGCTGCCCAAGATTGCATCTCCAGCGGAAGAATCAGAGGGATTAAATTAACGCTGTCTGGCTGCGCCATTAATAACCTTGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGCTCCACTGGAGTGGAGGCTGTGAGCAAGCTAGTGGAGTGGGGGCGTTTCTTAGGCAGGTGCTATGGCGACAGCAACAATGGCAACCGCAGCTGGCGCGGCTGCGCTTCTGTACTACACGCTGAACCGCCGGCTTCAGGTGGAGAAGCTGAATCAGGAAGGCGATTGCGGCAATGAAAGAGATGCCGCGACGAGGGGGGCCCTCAGTACCACCAGCAGGAGCAGGGTGTCAAGGAGGGATGTTCGTGCCCCTGCCACATGGCTGGAGACAATTTCCACTCTGTCGGAGACACTGCGGTTCACATACTCAGAGACCCTTGGGAAGTGGCCCATCGGTGACCTCGCTTTTGGGATTAGCTTCCTCCTCAAGAGGCAGGGGAATGTACCTGTAGCAAGCATATATGCTGGAGATGATAGTGTGGAGCTCAATGGAGCTCCAGTAATTGCTGACTTAAAGCATCATTTAAATTTGTTGACACTATGTTGGCATTTCTCCAAGAAGCCGTTCCCGTTGTTTTTGGAGGCGACTGGCTACTCTTCGGAGGATGTTCTTATGCAAGAGCCTAAAGCAGGAATTTTGAAGCCAGCTTTCACCATTATACTTGATAGAGACAAGCAATGTATACTTCTATTAATTAGGGGAACCCACAGCATCAGGGACACACTAACAGCAGCCACTGGTGCTGTGGTTCCATTCCACCATACTATTGTACAGGAAGGTGGTGTTAGCGATTTAGTTTTAGGGTACGCGCACTTTGGGATGGTTGCAGCAGCTAGATGGATTGCAAAGCTTGCAGCCCCTTGTCTTGCTCAGGCATTGCATACTCATCCAGATTATAAAATAAAGATTGTTGGACATTCACTTGGTGGTGGTACAGCAGCTCTGTTGACATATGTCCTGAGGGAACAGCAGGAGTTTGCATCTACTACTTGTGTCTCCTTTGCTCCAGCTGCTTGTATGACATGGGATCTGGCAGAATCAGGAGTGCATTTTATCACTACAGTCATCAATGGAGCTGATCTGGTGCCAACCTTTTCAGCTGCATCAGTAGACGATCTTCGTTCAGAGGTTACTGCATCTGCCTGGTTAAACGATCTGCGCCACCAAATAGAGCAAACCAGAATTCTGAGCACTTTCTATCGATCTGCGTCAGCCTTGGGATCAAGACTTCCTTCAATAGCAAATGCCAAAGCAAGAGTAGCTGGTGCTGGTGCTATCCTAAGACCTGTATCTACCGGGACACAGGTTGTAATGAGGAGAGCTCGTAGTGTAGCACAAGCAGCTTGGACAAGACCAGCACTTCAGCTATCCTCATGGACATGTATTGGCCCAAGGAGGCGAACTAATACTGTATCCACTTCAACAGTAACATCAGAAGAAATAAGAGCAACAACAAATGATGGCTCTGAGTCCACTTCTCTGTTGACTGAAACCACAGAGATAGTTAAAACTGAAACCATGCAGTTTGCTTCATCAGAAGAGGTTCAGAGTTCGAGTGAGGTGTCAGATGCTGTTGGAATGATGGATGAGAAGGTAGATAGTGACGGTGAGGACATCATTGATCACCATGTGGATGAGGACAGGATGACTGACGTAGAGCTGTGGCAGCAACTTGAAAATGAGTTGTACCGAAGGAGTGAAGATGACGAAATAGTGGAGGATATGACTGAAAGTGCTATTACTGAAGAGGTGGGTGGCACAGCTGAAGATGTGCTCAGTGAGACCAATGACAAGGAGGTACATAGATTTTATCCTCCAGGAAAAATCATGCATATATTAACTTCCACCATAGAGGAAACAGTCAGTGCCGAAGAGTCGAGCGTGCCTCATGAAGATGACACGACCGGTGATTC-GGACACC-AGAATAGGCATCTTCTTGACCCCAAGGTCATTAT-ATGGC-AAACTGAGGCTTTCAAAAATGATGATTAACGAT-CAT-TACATGCCTATAT-ATAGAAGAAATATTGAGCAGTTGATCGCTGAGCTTGAGAAGGATTCGTCATTCCCAGTCAGTGATTGTCTTGACAGTGAAGTT-CCCT-AGTTTGACACATACATATATGTAGTTCCAGCTGTTGTAAACGCTGATGCAATAGAATGATAGTTTCGTTAAGTGTATCTAACATCCTCTGGAATAATTACAGAATTCTCAGGTCCCTAATCACAAGGCACCACAAACGTTGCCCTATTTCTTACAAACTCAAGGACCATTTCTGTTACGCAAAGAAATTTCTACCTTTTTTTCGTTTAGAGGATGTGAAATTATTTAAGGGATTAGCTATACAACTTTGAACGGAAAATTTCCCTAAAATCTATTAAATGTA]

[+] EMBL AK063558             [AGGGCTCGGCTCCACACGAACGCGACGCGGCGGCCGCCACCGATTCCATCCGGAGGAAGGAGCCGCGCCGCCTCCTTCCTATATCCCTCCTCCTCTCCCGTCCTAAACCCTAGCCGCGACCGCGAGTTCGGGGTCCTAATCCGGATCGACTCCGCCTCCCCGAGTCGCTCGGACGCGTTCTTCTTCCGGGTTTGACTTTGTGCTGCCCAAGATTGCATCTCCAGCGGAAGAATCAGAGGGATTAAATTAACGCTGTCTGGCTGCGCCATTAATAACCTTGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGCTCCACTGGAGTGGAGGCTGTGAGCAAGCTAGTGGAGTGGGGGCGTTTCTTAGGCAGGTGCTATGGCGACAGCAACAATGGCAACCGCAGCTGGCGCGGCTGCGCTTCTGTACTACACGCTGAACCGCCGGCTTCAGGTGGAGAAGCTGAATCAGGAAGGCGATTGCGGCAATGAAAGAGATGCCGCGACGAGGGGGGCCCTCAGTACCACCAGCAGGAGCAGGGTGTCAAGGAGGGATGTTCGTGCCCCTGCCACATGGCTGGAGACAATTTCCACTCTGTCGGAGACACTGCGGTTCACATACTCAGAGACCCTTGGGAAGTGGCCCATCGGTGACCTCGCTTTTGGGATTAGCTTCCTCCTCAAGAGGCAGGGGAATGTACCTGTAGCAAGCATATATGCTGGAGATGATAGTGTGGAGCTCAATGGAGCTCCAGTAATTGCTGACTTAAAGCATCATTTAAATTTGTTGACACTATGTTGGCATTTCTCCAAGAAGCCGTTCCCGTTGTTTTTGGAGGCGACTGGCTACTCTTCGGAGGATGTTCTTATGCAAGAGCCTAAAGCAGGAATTTTGAAGCCAGCTTTCACCATTATACTTGATAGAGACAAGCAATGTATACTTCTATTAATTAGGGGAACCCACAGCATCAGGGACACACTAACAGCAGCCACTGGTGCTGTGGTTCCATTCCACCATACTATTGTACAGGAAGGTGGTGTTAGCGATTTAGTTTTAGGGTACGCGCACTTTGGGATGGTTGCAGCAGCTAGATGGATTGCAAAGCTTGCAGCCCCTTGTCTTGCTCAGGCATTGCATACTCATCCAGATTATAAAATAAAGATTGTTGGACATTCACTTGGTGGTGGTACAGCAGCTCTGTTGACATATGTCCTGAGGGAACAGCAGGAGTTTGCATCTACTACTTGTGTCTCCTTTGCTCCAGCTGCTTGTATGACATGGGATCTGGCAGAATCAGGAGTGCATTTTATCACTACAGTCATCAATGGAGCTGATCTGGTGCCAACCTTTTCAGCTGCATCAGTAGACGATCTTCGTTCAGAGGTTACTGCATCTGCCTGGTTAAACGATCTGCGCCACCAAATAGAGCAAACCAGAATTCTGAGCACTTTCTATCGATCTGCGTCAGCCTTGGGATCAAGACTTCCTTCAATAGCAAATGCCAAAGCAAGAGTAGCTGGTGCTGGTGCTATCCTAAGACCTGTATCTACCGGGACACAGGTTGTAATGAGGAGAGCTCGTAGTGTAGCACAAGCAGCTTGGACAAGACCAGCACTTCAGCTATCCTCATGGACATGTATTGGCCCAAGGAGGCGAACTAATACTGTATCCACTTCAACAGTAACATCAGAAGAAATAAGAGCAACAACAAATGATGGCTCTGAGTCCACTTCTCTGTTGACTGAAACCACAGAGATAGTTAAAACTGAAACCATGCAGTTTGCTTCATCAGAAGAGGTTCAGAGTTCGAGTGAGGTGTCAGATGCTGTTGGAATGATGGATGAGAAGGTAGATAGTGACGGTGAGGACATCATTGATCACCATGTGGATGAGGACAGGATGACTGACGTAGAGCTGTGGCAGCAACTTGAAAATGAGTTGTACCGAAGGAGTGAAGATGACGAAATAGTGGAGGATATGACTGAAAGTGCTATTACTGAAGAGGTGGGTGGCACAGCTGAAGATGTGCTCAGTGAGACCAATGACAAGGAGGTACATAGATTTTATCCTCCAGGAAAAATCATGCATATATTAACTTCCACCATAGAGGAAACAGTCAGTGCCGAAGAGTCGAGCGTGCCTCATGAAGATGACACGACCGGTGATTC GGACACC AGAATAGGCATCTTCTTGACCCCAAGGTCATTAT ATGGC AAACTGAGGCTTTCAAAAATGATGATTAACGAT CAT TACATGCCTATAT ATAGAAGAAATATTGAGCAGTTGATCGCTGAGCTTGAGAAGGATTCGTCATTCCCAGTCAGTGATTGTCTTGACAGTGAAGTT CCCT AGTTTGACACATACATATATGTAGTTCCAGCTGTTGTAAACGCTGATGCAATAGAATGATAGTTTCGTTAAGTGTATCTAACATCCTCTGGAATAATTACAGAATTCTCAGGTCCCTAATCACAAGGCACCACAAACGTTGCCCTATTTCTTACAAACTCAAGGACCATTTCTGTTACGCAAAGAAATTTCTACCTTTTTTTCGTTTAGAGGATGTGAAATTATTTAAGGGATTAGCTATACAACTTTGAACGGAAAATTTCCCTAAAATCTATTAAATGTA]
[+] EMBL BI807137             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   gGCCGAAGATTCGAGCGTGCCTCATGAAGATGACACGACCGGTGATTCAGGACACCAAGAATAGGCATCTTCTTGACCCCAAGGTCATTATGATGGCAAAACTGAGGCTTTCAAAATGGATGATTAACGATGCATGTACATGCCTATATGATAGAAGAAATATTGAGCAGTTGATCGCTGAGCTTGAGAAGGATTCGTCATTCCCAGTCAGTGATTGTCTTGACAGTGAAGTTGCCCTGAGTTTGACACATACATATATGTAGTTCCAGCTGTTGTAAACGCTGATGCAATAGAATGATAGTTTCGTTAAGTGTATCTAACATCCTCTGGAATAATTACAGAATTCTCAGGTCCCTAATCACAAGGCACCACAAACG TGCCCTATTTCGTAAAAA                                                                                                                             ]


>consensus_2267#0 AGGGCTCGGCTCCACACGAACGCGACGCGGCGGCCGCCACCGATTCCATCCGGAGGAAGG AGCCGCGCCGCCTCCTTCCTATATCCCTCCTCCTCTCCCGTCCTAAACCCTAGCCGCGAC CGCGAGTTCGGGGTCCTAATCCGGATCGACTCCGCCTCCCCGAGTCGCTCGGACGCGTTC TTCTTCCGGGTTTGACTTTGTGCTGCCCAAGATTGCATCTCCAGCGGAAGAATCAGAGGG ATTAAATTAACGCTGTCTGGCTGCGCCATTAATAACCTTGGGTGGTGGTGGTGGTGGTGG TGGTGGTGGTGCTCCACTGGAGTGGAGGCTGTGAGCAAGCTAGTGGAGTGGGGGCGTTTC TTAGGCAGGTGCTATGGCGACAGCAACAATGGCAACCGCAGCTGGCGCGGCTGCGCTTCT GTACTACACGCTGAACCGCCGGCTTCAGGTGGAGAAGCTGAATCAGGAAGGCGATTGCGG CAATGAAAGAGATGCCGCGACGAGGGGGGCCCTCAGTACCACCAGCAGGAGCAGGGTGTC AAGGAGGGATGTTCGTGCCCCTGCCACATGGCTGGAGACAATTTCCACTCTGTCGGAGAC ACTGCGGTTCACATACTCAGAGACCCTTGGGAAGTGGCCCATCGGTGACCTCGCTTTTGG GATTAGCTTCCTCCTCAAGAGGCAGGGGAATGTACCTGTAGCAAGCATATATGCTGGAGA TGATAGTGTGGAGCTCAATGGAGCTCCAGTAATTGCTGACTTAAAGCATCATTTAAATTT GTTGACACTATGTTGGCATTTCTCCAAGAAGCCGTTCCCGTTGTTTTTGGAGGCGACTGG CTACTCTTCGGAGGATGTTCTTATGCAAGAGCCTAAAGCAGGAATTTTGAAGCCAGCTTT CACCATTATACTTGATAGAGACAAGCAATGTATACTTCTATTAATTAGGGGAACCCACAG CATCAGGGACACACTAACAGCAGCCACTGGTGCTGTGGTTCCATTCCACCATACTATTGT ACAGGAAGGTGGTGTTAGCGATTTAGTTTTAGGGTACGCGCACTTTGGGATGGTTGCAGC AGCTAGATGGATTGCAAAGCTTGCAGCCCCTTGTCTTGCTCAGGCATTGCATACTCATCC AGATTATAAAATAAAGATTGTTGGACATTCACTTGGTGGTGGTACAGCAGCTCTGTTGAC ATATGTCCTGAGGGAACAGCAGGAGTTTGCATCTACTACTTGTGTCTCCTTTGCTCCAGC TGCTTGTATGACATGGGATCTGGCAGAATCAGGAGTGCATTTTATCACTACAGTCATCAA TGGAGCTGATCTGGTGCCAACCTTTTCAGCTGCATCAGTAGACGATCTTCGTTCAGAGGT TACTGCATCTGCCTGGTTAAACGATCTGCGCCACCAAATAGAGCAAACCAGAATTCTGAG CACTTTCTATCGATCTGCGTCAGCCTTGGGATCAAGACTTCCTTCAATAGCAAATGCCAA AGCAAGAGTAGCTGGTGCTGGTGCTATCCTAAGACCTGTATCTACCGGGACACAGGTTGT AATGAGGAGAGCTCGTAGTGTAGCACAAGCAGCTTGGACAAGACCAGCACTTCAGCTATC CTCATGGACATGTATTGGCCCAAGGAGGCGAACTAATACTGTATCCACTTCAACAGTAAC ATCAGAAGAAATAAGAGCAACAACAAATGATGGCTCTGAGTCCACTTCTCTGTTGACTGA AACCACAGAGATAGTTAAAACTGAAACCATGCAGTTTGCTTCATCAGAAGAGGTTCAGAG TTCGAGTGAGGTGTCAGATGCTGTTGGAATGATGGATGAGAAGGTAGATAGTGACGGTGA GGACATCATTGATCACCATGTGGATGAGGACAGGATGACTGACGTAGAGCTGTGGCAGCA ACTTGAAAATGAGTTGTACCGAAGGAGTGAAGATGACGAAATAGTGGAGGATATGACTGA AAGTGCTATTACTGAAGAGGTGGGTGGCACAGCTGAAGATGTGCTCAGTGAGACCAATGA CAAGGAGGTACATAGATTTTATCCTCCAGGAAAAATCATGCATATATTAACTTCCACCAT AGAGGAAACAGTCAGTGCCGAAGAGTCGAGCGTGCCTCATGAAGATGACACGACCGGTGA TTCGGACACCAGAATAGGCATCTTCTTGACCCCAAGGTCATTATATGGCAAACTGAGGCT TTCAAAAATGATGATTAACGATCATTACATGCCTATATATAGAAGAAATATTGAGCAGTT GATCGCTGAGCTTGAGAAGGATTCGTCATTCCCAGTCAGTGATTGTCTTGACAGTGAAGT TCCCTAGTTTGACACATACATATATGTAGTTCCAGCTGTTGTAAACGCTGATGCAATAGA ATGATAGTTTCGTTAAGTGTATCTAACATCCTCTGGAATAATTACAGAATTCTCAGGTCC CTAATCACAAGGCACCACAAACGTTGCCCTATTTCTTACAAACTCAAGGACCATTTCTGT TACGCAAAGAAATTTCTACCTTTTTTTCGTTTAGAGGATGTGAAATTATTTAAGGGATTA GCTATACAACTTTGAACGGAAAATTTCCCTAAAATCTATTAAATGTA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)