cluster # 23

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Oryza sativa
cluster # 23 cluster # 23 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_23#0 length = 450 sequences # 2

consensusID : consensus_23#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 450
fasta sequence

                              [AATCATCCAATTAATTACTTCATTACTGCCTTAATTGCTATGGATAGCATAGATCCACTTTCAACCACTTCGTCCCCCCGCGTTTACCGGGAGTTTTTATGAATTTCTTATTGTAGAAGTACAACTTCGCCCATAGATAGACACACAGCTCATGATCCCAGCTCACCTCATGAGTCATGACTGATGAGTAGCAGTAGCATCAAAGATATAAAATGCAAGTTAAAAAAGGCAAAAAGCGATGTGCCCTTTTTCTTGGCCATCCCCTGAGATTCATGGGCTGTTCCTACTCTTTATTAGCAAAAGAGAAAAACAGAAGCAAATAAATGCACTCCCTTACCAGCATGGAATTTTTTGCTCATAGCATAAAGTCAAGTACAGCATCCAAGCTG-TTTAATTCTAGTACCAAGCTGGAAAACTTGTCTCATGTGTA-GTATATACACCACCAGCACA]

[+] EMBL AK121303             [AATCATCCAATTAATTACTTCATTACTGCCTTAATTGCTATGGATAGCATAGATCCACTTTCAACCACTTCGTCCCCCCGCGTTTACCGGGAGTTTTTATGAATTTCTTATTGTAGAAGTACAACTTCGCCCATAGATAGACACACAGCTCATGATCCCAGCTCACCTCATGAGTCATGACTGATGAGTAGCAGTAGCATCAAAGATATAAAATGCAAGTTAAAAAAGGCAAAAAGCGATGTGCCCTTTTTCTTGGCCATCCCCTGAGATTCATGGGCTGTTCCTACTCTTTATTAGCAAAAGAGAAAAACAGAAGCAAATAAATGCACTCCCTTACCAGCATGGAATTTTTTGCTCATAGCATAAAGTCAAGTACAGCATCCAAGCTG TTTAATTCTAGTACCAAGCTGGAAAACTTGTCTCATGTGTA GTATATACACCACCAGCACA]
[+] EMBL OS1321848            [                      TTACTGCCTTAATTGCTATGGATAGCATAGATCCACTTTCAACCACTTCGTCCCCCCGCGTTTACCGGGAGTTTTTATGAATTTCTTATTGTAGAAGTACAACTTCGCCCATAGATAGACACACAGCTCATGATCCCAGCTCACCTCATGAGTCATGACTGATGAGTAGCAGTAGCATCAAAGATATAAAATGCAAGTTAAAAAAGGCAAAAAGCGATGTGCCCTTTTTCTTGGCCATCCCCTGAGATTCATGGGCTGTTCCTACTCTTTATTAGCAAAAGGAAAAAACAGAGGCAAATAAATGCACTNCCTTACCAGCATGGAATTTTTTGCTCATAGGATAAAGTCAGGTACAGNATCCAAGCTGNTTTAATTCTAGTACCAGGTTGGGAAACTTGTCTCATGTGTAGGGTTTTACACC         ]




>consensus_23#0
AATCATCCAATTAATTACTTCATTACTGCCTTAATTGCTATGGATAGCATAGATCCACTT
TCAACCACTTCGTCCCCCCGCGTTTACCGGGAGTTTTTATGAATTTCTTATTGTAGAAGT
ACAACTTCGCCCATAGATAGACACACAGCTCATGATCCCAGCTCACCTCATGAGTCATGA
CTGATGAGTAGCAGTAGCATCAAAGATATAAAATGCAAGTTAAAAAAGGCAAAAAGCGAT
GTGCCCTTTTTCTTGGCCATCCCCTGAGATTCATGGGCTGTTCCTACTCTTTATTAGCAA
AAGAGAAAAACAGAAGCAAATAAATGCACTCCCTTACCAGCATGGAATTTTTTGCTCATA
GCATAAAGTCAAGTACAGCATCCAAGCTGTTTAATTCTAGTACCAAGCTGGAAAACTTGT
CTCATGTGTAGTATATACACCACCAGCACA

clustalw multiple alignements is not computed in this case