cluster # 2342

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Oryza sativa
cluster # 2342 cluster # 2342 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2342#0 length = 1729 sequences # 2
consensusID : consensus_2342#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1729
fasta sequence
                              [TCTTCTCGTCGCATTCGACGGCATCACTCGCCAAAAGCTCAGCCCAGGATCCCCCGCCGCCGATGTCGGACGGCAGCGTCGAGTCGCCGTCGCTCCACCGCACGCCGCCTCCGCCCTCCCCGTCGCCGTCACTCTCGCTCTCGCGCTCCCAGCAGCAGACCCCGCGGGGCCGCCAGCCGCCCCCGCCCGGCGCCGACCCCGTCGCCTTCGCCGTCGTCGCCTTCGTCGCCATCTGCTTCGTGCTGATTTCATTTTCGGCACCGTCAAGCATTCTACATCAAGTCCCTGAAGGACATGTTGGGGTGTACTGGAGAGGAGGTGCTCTTTTGGAAACAATCACTCCACCAGGTTTTCATGTGAAGCTGCCTTGGATAACCCAATTTGAGCCAATACAGGTTACTCTTCAAACAGACCAGGTCAGAAATATTCCTTGTGGAACAAAAGGTGGAGTCATGATCAGCTTTGATAAGATCGAGGTTGTCAACCGCCTCCATAAAGAGTTTGTGCACGAAACCTTACTCAATTATGGTGTGCATTATGACAAGACATGGATCTATGACAAAATTCATCATGAGATAAACCAGTTCTGTAGTGCCCACAGTTTGCAGCAAGTTTACATCGACTTGTTTGATCAGATTGATGAAACGATGAAAGAAGCTATTCAAAGAGACTGTACACGCTATGCTCCTGGTATTGAGATAATCAGTGTTCGTGTTACAAAGCCGAACATACCTGATAGCATTAGGAGAAATTTTGAACTTATGGAGGAGGAGCGTACAAAGGCATTGATTGCCATTGAGAAGCAAAAGGTAGCAGAGAAGGAAGCAGAAACGCAGAAGAAAATTGCACTATCTGAAGCAGAGAAGAATGCACAGGTGAGCAAGATCCTCATGGAGCAGAAGCTTATGGAAAAGGACAGCTCCAAGAGGCAGCAACAGATTGATAATGAAATGTTCCTTGCCCGAGAGAAAGCTCTTACAGATGCGAACTATTACAGGATAACGAAGGAAGCAGAGGCCAACAGGCTTAAACTTACACCGGAGTACCTTGAGCTGAGGTTCATTGAATCAATCGCCAATAACTCGAAGATATTCTTTGGTGAAAAGATTCCAAACATGATCATGGATCAAAGGATGCTTAGGAATTACCTCGACAATGGTTCCACCAAGGACCATTTGGAAATATAGCAGTTGTCTCTGTGAATTGCAAAGAACATTGGCTGTTTTTCTGATCCCACGGGGAAATTAGGATTCTCACGGATCTGCTCACTACTTGGTAAAGCCAAAAGGACTAGACATTAGGGCCTTTTAAAGATGGAAATTAGTAGTCTACTGTAGTAGCATAGCTGGAGGCTGGAGTAATCGTTTTGCGTGCGTGCGTAGGAGCTGGGAGTTACGTTAGATCACTAGATGCGCTATCTTGTGCAATCTGCAGAACTGATGGACAGGAACAAATGCTATCAGGAGCACTATGATTTCCAAGTTCAGAAAAGGTTCTACGAGTACAAATGGGAAAGATCGGGCATTACTTGATACAGTAGTCTCAGCGATCGACACAGCACTAACTGTGTGAAGCTATATACTCCTATCTGGAATTGAGGTATAGCATCTGTCTGCAAGGAAGATTTCTGAGTATAGCAGGTTCACATACATGTTGCATGCATCTATCTGCAAACAAACCTGTATCATGAATGTGAACAATTGGACTAGTAACTAATGGGTATAGGAAA]

[+] EMBL AK103193             [TCTTCTCGTCGCATTCGACGGCATCACTCGCCAAAAGCTCAGCCCAGGATCCCCCGCCGCCGATGTCGGACGGCAGCGTCGAGTCGCCGTCGCTCCACCGCACGCCGCCTCCGCCCTCCCCGTCGCCGTCACTCTCGCTCTCGCGCTCCCAGCAGCAGACCCCGCGGGGCCGCCAGCCGCCCCCGCCCGGCGCCGACCCCGTCGCCTTCGCCGTCGTCGCCTTCGTCGCCATCTGCTTCGTGCTGATTTCATTTTCGGCACCGTCAAGCATTCTACATCAAGTCCCTGAAGGACATGTTGGGGTGTACTGGAGAGGAGGTGCTCTTTTGGAAACAATCACTCCACCAGGTTTTCATGTGAAGCTGCCTTGGATAACCCAATTTGAGCCAATACAGGTTACTCTTCAAACAGACCAGGTCAGAAATATTCCTTGTGGAACAAAAGGTGGAGTCATGATCAGCTTTGATAAGATCGAGGTTGTCAACCGCCTCCATAAAGAGTTTGTGCACGAAACCTTACTCAATTATGGTGTGCATTATGACAAGACATGGATCTATGACAAAATTCATCATGAGATAAACCAGTTCTGTAGTGCCCACAGTTTGCAGCAAGTTTACATCGACTTGTTTGATCAGATTGATGAAACGATGAAAGAAGCTATTCAAAGAGACTGTACACGCTATGCTCCTGGTATTGAGATAATCAGTGTTCGTGTTACAAAGCCGAACATACCTGATAGCATTAGGAGAAATTTTGAACTTATGGAGGAGGAGCGTACAAAGGCATTGATTGCCATTGAGAAGCAAAAGGTAGCAGAGAAGGAAGCAGAAACGCAGAAGAAAATTGCACTATCTGAAGCAGAGAAGAATGCACAGGTGAGCAAGATCCTCATGGAGCAGAAGCTTATGGAAAAGGACAGCTCCAAGAGGCAGCAACAGATTGATAATGAAATGTTCCTTGCCCGAGAGAAAGCTCTTACAGATGCGAACTATTACAGGATAACGAAGGAAGCAGAGGCCAACAGGCTTAAACTTACACCGGAGTACCTTGAGCTGAGGTTCATTGAATCAATCGCCAATAACTCGAAGATATTCTTTGGTGAAAAGATTCCAAACATGATCATGGATCAAAGGATGCTTAGGAATTACCTCGACAATGGTTCCACCAAGGACCATTTGGAAATATAGCAGTTGTCTCTGTGAATTGCAAAGAACATTGGCTGTTTTTCTGATCCCACGGGGAAATTAGGATTCTCACGGATCTGCTCACTACTTGGTAAAGCCAAAAGGACTAGACATTAGGGCCTTTTAAAGATGGAAATTAGTAGTCTACTGTAGTAGCATAGCTGGAGGCTGGAGTAATCGTTTTGCGTGCGTGCGTAGGAGCTGGGAGTTACGTTAGATCACTAGATGCGCTATCTTGTGCAATCTGCAGAACTGATGGACAGGAACAAATGCTATCAGGAGCACTATGATTTCCAAGTTCAGAAAAGGTTCTACGAGTACAAATGGGAAAGATCGGGCATTACTTGATACAGTAGTCTCAGCGATCGACACAGCACTAACTGTGTGAAGCTATATACTCCTATCTGGAATTGAGGTATAGCATCTGTCTGCAAGGAAGATTTCTGAGTATAGCAGGTTCACATACATGTTGCATGCATCTATCTGCAAACAAACCTGTATCATGAATGTGAACAATTGGACTAGTAACTAATGGGTATAGGAAA]
[+] EMBL AK064680             [                               CAAAAGCTCAGCCCAGGATCCCCCGCCGCCGATGTCGGACGGCAGCGTCGAGTCGCCGTCGCTCCACCGCACGCCGCCTCCGCCCTCCCCGTCGCCGTCACTCTCGCTCTCGCGCTCCCAGCAGCAGACCCCGCGGGGCCGCCAGCCGCCCCCGCCCGGCGCCGACCCCGTCGCCTTCGCCGTCGTCGCCTTCGTCGCCATCTGCTTCGTGCTGATTTCATTTTCGGCACCGTCAAGCATTCTACATCAAGTCCCTGAAGGACATGTTGGGGTGTACTGGAGAGGAGGTGCTCTTTTGGAAACAATCACTCCACCAGGTTTTCATGTGAAGCTGCCTTGGATAACCCAATTTGAGCCAATACAGGTTACTCTTCAAACAGACCAGGTCAGAAATATTCCTTGTGGAACAAAAGGTGGAGTCATGATCAGCTTTGATAAGATCGAGGTTGTCAACCGCCTCCATAAAGAGTTTGTGCACGAAACCTTACTCAATTATGGTGTGCATTATGACAAGACATGGATCTATGACAAAATTCATCATGAGATAAACCAGTTCTGTAGTGCCCACAGTTTGCAGCAAGTTTACATCGACTTGTTTGATCAGATTGATGAAACGATGAAAGAAGCTATTCAAAGAGACTGTACACGCTATGCTCCTGGTATTGAGATAATCAGTGTTCGTGTTACAAAGCCGAACATACCTGATAGCATTAGGAGAAATTTTGAACTTATGGAGGAGGAGCGTACAAAGGCATTGATTGCCATTGAGAAGCAAAAGGTAGCAGAGAAGGAAGCAGAAACGCAGAAGAAGATTGCACTATCTGAAGCAGAGAAGAATGCACAGGTGAGCAAGATCCTCATGGAGCAGAAGCTTATGGAAAAGGACAGCTCCAAGAGGCAGCAACAGATTGATAATGAAATGTTCCTTGCCCGAGAGAAAGCTCTTACAGATGCGAACTATTACAGGATAACGAAGGAAGCAGAGGCCAACAGGCTTAAACTTACACCGGAGTACCTTGAGCTGAGGTTCATTGAATCAATCGCCAATAACTCGAAGATACTCTTTGGTGAAAAGATTCCAAACATGATCATGGATCAAAGGATGCCTAGGAATTACCTCGACAATGGTTCCACCAAGGACCATTTGGAAATATAGCAGTTGTCTCTGTGAATTGCAAAGAACATTGGCTGTTTTTCTGATCCCACGGGGAAATTAGGATTCTCACGGATCTGCTCACTACTTGGTAAAGCCAAAAGGACTAGACATTAGGGCCTTTTAAAGATGGAAATTAGTAGTCTACTGTAGTAGCATAGCTGGAGGCTGGAGTAATCGTTTTGCGTGCGTGCGTAGGAGCTGGGAGTTACGTTAGATCACTAGATGCGCTATCTTGTGCAATCTGCAGAACTGATGGACAGGAACAAATGCTATCAGGAGCACTATGATTTCCAAGTTCAGAAAAGGTTCTACGAGTACAAATGGGAAAGATCGGGCATTACTTGATACAGTAGTCTCAGCGATCGACACAGCACTAACTGTGTGAAGCTATATACTCCTATCTGGAATTGAGGTATAGCATCTGTCTGCAAGGAAGATTTCTGAGTGTAGCAGGTTCACATACATGTTGCATGCATCTATCTGCAAACAAACCTGTATCATGAATGTGAACAATTGGACTAGTAACTAATGGG         ]




>consensus_2342#0
TCTTCTCGTCGCATTCGACGGCATCACTCGCCAAAAGCTCAGCCCAGGATCCCCCGCCGC
CGATGTCGGACGGCAGCGTCGAGTCGCCGTCGCTCCACCGCACGCCGCCTCCGCCCTCCC
CGTCGCCGTCACTCTCGCTCTCGCGCTCCCAGCAGCAGACCCCGCGGGGCCGCCAGCCGC
CCCCGCCCGGCGCCGACCCCGTCGCCTTCGCCGTCGTCGCCTTCGTCGCCATCTGCTTCG
TGCTGATTTCATTTTCGGCACCGTCAAGCATTCTACATCAAGTCCCTGAAGGACATGTTG
GGGTGTACTGGAGAGGAGGTGCTCTTTTGGAAACAATCACTCCACCAGGTTTTCATGTGA
AGCTGCCTTGGATAACCCAATTTGAGCCAATACAGGTTACTCTTCAAACAGACCAGGTCA
GAAATATTCCTTGTGGAACAAAAGGTGGAGTCATGATCAGCTTTGATAAGATCGAGGTTG
TCAACCGCCTCCATAAAGAGTTTGTGCACGAAACCTTACTCAATTATGGTGTGCATTATG
ACAAGACATGGATCTATGACAAAATTCATCATGAGATAAACCAGTTCTGTAGTGCCCACA
GTTTGCAGCAAGTTTACATCGACTTGTTTGATCAGATTGATGAAACGATGAAAGAAGCTA
TTCAAAGAGACTGTACACGCTATGCTCCTGGTATTGAGATAATCAGTGTTCGTGTTACAA
AGCCGAACATACCTGATAGCATTAGGAGAAATTTTGAACTTATGGAGGAGGAGCGTACAA
AGGCATTGATTGCCATTGAGAAGCAAAAGGTAGCAGAGAAGGAAGCAGAAACGCAGAAGA
AAATTGCACTATCTGAAGCAGAGAAGAATGCACAGGTGAGCAAGATCCTCATGGAGCAGA
AGCTTATGGAAAAGGACAGCTCCAAGAGGCAGCAACAGATTGATAATGAAATGTTCCTTG
CCCGAGAGAAAGCTCTTACAGATGCGAACTATTACAGGATAACGAAGGAAGCAGAGGCCA
ACAGGCTTAAACTTACACCGGAGTACCTTGAGCTGAGGTTCATTGAATCAATCGCCAATA
ACTCGAAGATATTCTTTGGTGAAAAGATTCCAAACATGATCATGGATCAAAGGATGCTTA
GGAATTACCTCGACAATGGTTCCACCAAGGACCATTTGGAAATATAGCAGTTGTCTCTGT
GAATTGCAAAGAACATTGGCTGTTTTTCTGATCCCACGGGGAAATTAGGATTCTCACGGA
TCTGCTCACTACTTGGTAAAGCCAAAAGGACTAGACATTAGGGCCTTTTAAAGATGGAAA
TTAGTAGTCTACTGTAGTAGCATAGCTGGAGGCTGGAGTAATCGTTTTGCGTGCGTGCGT
AGGAGCTGGGAGTTACGTTAGATCACTAGATGCGCTATCTTGTGCAATCTGCAGAACTGA
TGGACAGGAACAAATGCTATCAGGAGCACTATGATTTCCAAGTTCAGAAAAGGTTCTACG
AGTACAAATGGGAAAGATCGGGCATTACTTGATACAGTAGTCTCAGCGATCGACACAGCA
CTAACTGTGTGAAGCTATATACTCCTATCTGGAATTGAGGTATAGCATCTGTCTGCAAGG
AAGATTTCTGAGTATAGCAGGTTCACATACATGTTGCATGCATCTATCTGCAAACAAACC
TGTATCATGAATGTGAACAATTGGACTAGTAACTAATGGGTATAGGAAA
clustalw multiple alignements is not computed in this case