Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 2377 cluster # 2377       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2377#0 length = 1467 sequences # 2  

consensusID : consensus_2377#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1467
fasta sequence
                              [GGCCAAACTGCGGTGCTTCCGCCGCCGCCGCCGCCGAGCGGCCAAGCCCAACGCCGCCACGCCCTCGCCGGCGGCGCGGCCTGCCCCGACGCCTACGCCGACGCCGCCGCCGCTGGCGGTTCTCAGCGACGACGTCCTGAGGGAGATCTTCGTCCGCGTCCCGTCCCCCGCCGACCTCGCCCGCGCCGCCACCGCCTGCGCCGGCTTCCGCCGCGTCATCACCGAGCCCTCCTTCCTCCGCCGCTTCCGCGCCGCCGACAACCAGCCGGCGCTGCTCGGCTTCATCGACGTCGGCGGCGGCTTCGTCCCCGCGGAGCCGCCCCACCCCAGCGTCGCCGCCTCCGCCCAGCTCCACAACCTCCTCGATTTACAGCCCTTCTTCGCTCCGCCACGCGACGACGACGACGACGGCGGCGGCGGCACGTCATTCAGGGTGATGTACATGGCGCGATGCCAGTCCAAGCTAGTCGTGTTCACCTTCTCCTCAGATACCCAACAATGGAGCTCCACCTCCTACGACGGATGGGGGATTTTGGTCGCAGCAACTCCATCTCAGGAAACCGCATTGACCCAACGCCACCATGCTCACGGCTGCATCTTCTGGTTCTTGCGTTGGGCGAAGAAACTACTTGTGCTGGACACCTTCACGATGGAACTATCCACCATCAACCTCCCATCCAGTGAACTGATTGAAATCCAGCAGGTTGCAATCGTGGAGTCAGCGAGAGGCGGGATTGGGATGTTTGCCATGGTTGACGAGATATTGGACAGCACATTCGACATGTTCTATGTGGTTTGGGATCCCGAGGGCGCGAACAAGTGGCCATTGGAGAGGCTGATGAAGTTGCCAGTGGAGTTTCGGTACAACCTGGTGGGAGCAGCTGGGGGTTACCTCCTTGTCCAGGGGATTTCAGTGCAGGGGCCTGTGCAAGATCAGGTGTGCTTTACGGTGGAGCTCAAGACTTTCAAGGTTGAGATGTTCTGTGAAACTAGGCGTACCTTGATAGGTGCTGATCTGTTTGCTGGATTCGCCCCATCTTTGTCGCCACCAAGCGTATGAAATGGGACAGATGGACGCTGGCCTTTCTCTGGATCATCCTTCTGGAGTTCTGGTGTTGGTGAAGGGACCATGATGGTGTATTGGTGTTGTACTTTTGTTCGGCTACAATGCTAGCAGGCAGAGCCTCCATCAAACTTGTTTCCTGAGTGCGTGTAATCAAAACAAGCTGTCGCTAAACCCAGTCTTTGTCAAATTAGAGTTGGGCGCCTCGGGAAAAAGAAAGAATGAGAGTGTTGGGTAAAACCGAGTGTGTCGGATAGTGTTGGGCGGTACCCAGTCCGTCGGTTAAGTGTTGGCCCGAACCAATGTCGGAATAAGTGTTGTCTGTCAGAGTAAGTGTTGGCTGAAGTTGTGGTCTTGTGGACCATGTCGATTGAATAAGCATTGGAATTTGCATTTTGAAAAAA]

[+] EMBL AK105566             [GGCCAAACTGCGGTGCTTCCGCCGCCGCCGCCGCCGAGCGGCCAAGCCCAACGCCGCCACGCCCTCGCCGGCGGCGCGGCCTGCCCCGACGCCTACGCCGACGCCGCCGCCGCTGGCGGTTCTCAGCGACGACGTCCTGAGGGAGATCTTCGTCCGCGTCCCGTCCCCCGCCGACCTCGCCCGCGCCGCCACCGCCTGCGCCGGCTTCCGCCGCGTCATCACCGAGCCCTCCTTCCTCCGCCGCTTCCGCGCCGCCGACAACCAGCCGGCGCTGCTCGGCTTCATCGACGTCGGCGGCGGCTTCGTCCCCGCGGAGCCGCCCCACCCCAGCGTCGCCGCCTCCGCCCAGCTCCACAACCTCCTCGATTTACAGCCCTTCTTCGCTCCGCCACGCGACGACGACGACGACGGCGGCGGCGGCACGTCATTCAGGGTGATGTACATGGCGCGATGCCAGTCCAAGCTAGTCGTGTTCACCTTCTCCTCAGATACCCAACAATGGAGCTCCACCTCCTACGACGGATGGGGGATTTTGGTCGCAGCAACTCCATCTCAGGAAACCGCATTGACCCAACGCCACCATGCTCACGGCTGCATCTTCTGGTTCTTGCGTTGGGCGAAGAAACTACTTGTGCTGGACACCTTCACGATGGAACTATCCACCATCAACCTCCCATCCAGTGAACTGATTGAAATCCAGCAGGTTGCAATCGTGGAGTCAGCGAGAGGCGGGATTGGGATGTTTGCCATGGTTGACGAGATATTGGACAGCACATTCGACATGTTCTATGTGGTTTGGGATCCCGAGGGCGCGAACAAGTGGCCATTGGAGAGGCTGATGAAGTTGCCAGTGGAGTTTCGGTACAACCTGGTGGGAGCAGCTGGGGGTTACCTCCTTGTCCAGGGGATTTCAGTGCAGGGGCCTGTGCAAGATCAGGTGTGCTTTACGGTGGAGCTCAAGACTTTCAAGGTTGAGATGTTCTGTGAAACTAGGCGTACCTTGATAGGTGCTGATCTGTTTGCTGGATTCGCCCCATCTTTGTCGCCACCAAGCGTATGAAATGGGACAGATGGACGCTGGCCTTTCTCTGGATCATCCTTCTGGAGTTCTGGTGTTGGTGAAGGGACCATGATGGTGTATTGGTGTTGTACTTTTGTTCGGCTACAATGCTAGCAGGCAGAGCCTCCATCAAACTTGTTTCCTGAGTGCGTGTAATCAAAACAAGCTGTCGCTAAACCCAGTCTTTGTCAAATTAGAGTTGGGCGCCTCGGGAAAAAGAAAGAATGAGAGTGTTGGGTAAAACCGAGTGTGTCGGATAGTGTTGGGCGGTACCCAGTCCGTCGGTTAAGTGTTGGCCCGAACCAATGTCGGAATAAGTGTTGTCTGTCAGAGTAAGTGTTGGCTGAAGTTGTGGTCTTGTGGACCATGTCGATTGAATAAGCAT                      ]
[+] EMBL BI802510             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AACTAGGCGTACCTTGATAGGT CTGATCTGTTTGCTGGATTCGCCCCATCTTTGTCGCCACCAAGCGTATGAAATGCGACAGATGGACGCTGGCCTTTCTCTGGATCATCCTTCTGGAGTTCTGGTGTTGGTGAAGGGACCATGATGGTGTATTGGTGTTGCACTTTTGTTCGGCTACAATGCTAGCAGGCAGAGCCTCCATCAAACTTGTTTCCTGAGTGCGTGTAATCAAAACCAGCTGTCGCTAAACCCAGTCTTTGTCAAATTAGAGTTGGGCGCCTCGGGAAAAAGAAAGAATGAGAGTGTTGGGTAAAACCGAGTGTGTCGGATAGTGTTGGGCGGTACCCAGTCCGTCGGTTAAGTGTTGGCCCGAACC ATGTCGGAATAAGTGTTGTCTGTCAGAGTAAGTGTTGGCTGAAGTTGTGGTCTTGTGGACCATGTCGATTGAATAAGCATTGGAATTTGCATTTTGAAAAAA]


>consensus_2377#0 GGCCAAACTGCGGTGCTTCCGCCGCCGCCGCCGCCGAGCGGCCAAGCCCAACGCCGCCAC GCCCTCGCCGGCGGCGCGGCCTGCCCCGACGCCTACGCCGACGCCGCCGCCGCTGGCGGT TCTCAGCGACGACGTCCTGAGGGAGATCTTCGTCCGCGTCCCGTCCCCCGCCGACCTCGC CCGCGCCGCCACCGCCTGCGCCGGCTTCCGCCGCGTCATCACCGAGCCCTCCTTCCTCCG CCGCTTCCGCGCCGCCGACAACCAGCCGGCGCTGCTCGGCTTCATCGACGTCGGCGGCGG CTTCGTCCCCGCGGAGCCGCCCCACCCCAGCGTCGCCGCCTCCGCCCAGCTCCACAACCT CCTCGATTTACAGCCCTTCTTCGCTCCGCCACGCGACGACGACGACGACGGCGGCGGCGG CACGTCATTCAGGGTGATGTACATGGCGCGATGCCAGTCCAAGCTAGTCGTGTTCACCTT CTCCTCAGATACCCAACAATGGAGCTCCACCTCCTACGACGGATGGGGGATTTTGGTCGC AGCAACTCCATCTCAGGAAACCGCATTGACCCAACGCCACCATGCTCACGGCTGCATCTT CTGGTTCTTGCGTTGGGCGAAGAAACTACTTGTGCTGGACACCTTCACGATGGAACTATC CACCATCAACCTCCCATCCAGTGAACTGATTGAAATCCAGCAGGTTGCAATCGTGGAGTC AGCGAGAGGCGGGATTGGGATGTTTGCCATGGTTGACGAGATATTGGACAGCACATTCGA CATGTTCTATGTGGTTTGGGATCCCGAGGGCGCGAACAAGTGGCCATTGGAGAGGCTGAT GAAGTTGCCAGTGGAGTTTCGGTACAACCTGGTGGGAGCAGCTGGGGGTTACCTCCTTGT CCAGGGGATTTCAGTGCAGGGGCCTGTGCAAGATCAGGTGTGCTTTACGGTGGAGCTCAA GACTTTCAAGGTTGAGATGTTCTGTGAAACTAGGCGTACCTTGATAGGTGCTGATCTGTT TGCTGGATTCGCCCCATCTTTGTCGCCACCAAGCGTATGAAATGGGACAGATGGACGCTG GCCTTTCTCTGGATCATCCTTCTGGAGTTCTGGTGTTGGTGAAGGGACCATGATGGTGTA TTGGTGTTGTACTTTTGTTCGGCTACAATGCTAGCAGGCAGAGCCTCCATCAAACTTGTT TCCTGAGTGCGTGTAATCAAAACAAGCTGTCGCTAAACCCAGTCTTTGTCAAATTAGAGT TGGGCGCCTCGGGAAAAAGAAAGAATGAGAGTGTTGGGTAAAACCGAGTGTGTCGGATAG TGTTGGGCGGTACCCAGTCCGTCGGTTAAGTGTTGGCCCGAACCAATGTCGGAATAAGTG TTGTCTGTCAGAGTAAGTGTTGGCTGAAGTTGTGGTCTTGTGGACCATGTCGATTGAATA AGCATTGGAATTTGCATTTTGAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)