Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 2384 cluster # 2384       Sequences # 2       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2384#0 length = 347 sequences # 2  
consensusID : consensus_2384#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 347
fasta sequence 
                              [CCGCCGGCAACAACTACCAGCACCAGCAGGGCCCAGGGCCCAGGGCCAGCAAGCACCTTACCGCAACGAGCAAGTCGAGAACTACAACAACTAAACATGGGCATATCGACGATCGAGCTGCATGAGTTCCAAGGGGTTGTCACGTATGCTTCCTACTGTTACTTTACTTGCGCCTTTGCCACTCTTGCGC-CCGTGTCGATTAATTTGTC-CAGATTGTCTGGCCCGGCCTCCAGTACGTCGTCACTACGTGTTTTGTTCGGCATCGTGGTTTTTCTACCGTTGTAACAGTC-CAGTTTACCTATCGTCCTTGTAATAAAATGTT-GCCA-CCCCCNNCATA--AAAAAAAAAA]

[+] EMBL BI806971             [CCGCCGGCAACAACTACCAGCACCAGCAGGGCCCAGGGCCCAGGGCCAGCAAGCACCTTACCGCAACGAGCAAGTCGAGAACTACAACAACTAAACATGGGCATATCGACGATCGAGCTGCATGAGTTCCAAGGGGTTGTCACGTATGCTTCCTACTGTTACTTTACTTGCGCCTTTGCCACTCTTGCGC CCGTGTCGATTAATTTGTC CAGATTGTCTGGCCCGGCCTCCAGTACGTCGTCACTACGTGTTTTGTTCGGCATCGTGGTTTTTCTACCGTTGTAACAGTC CAGTTTACCTATCGTCCTTGTAATAAAATGTT GCCA CCCCCNNCATA  AAAAAAAA  ]
[+] EMBL BI805913             [                                                       cacTACCGCAACGAGCAAGTCGAGAACTACAACAACTAAACATGGGCAAATCGACGATCGAGCTGCATGAGTTCCAAGGGGTTGTCACGTATGCTTCCTACTGTTACTTTACTTGCGCCTTTGCCA T TTGCGCGCCGTGTCGATTAATTTGTCGCAGATTGTCTGGCCCGGCCTCCAGTACGTCGTCACTACGTGTTTTGTTCGGCATCGTGGTTTTTCTACCGTTGTAACAGTCGCAGTTTACCTATCGTCCTTGTAATAAAATGTTGGCCAGCCCCTTTCATATGAAAAAAAAAA]




>consensus_2384#0
CCGCCGGCAACAACTACCAGCACCAGCAGGGCCCAGGGCCCAGGGCCAGCAAGCACCTTA
CCGCAACGAGCAAGTCGAGAACTACAACAACTAAACATGGGCATATCGACGATCGAGCTG
CATGAGTTCCAAGGGGTTGTCACGTATGCTTCCTACTGTTACTTTACTTGCGCCTTTGCC
ACTCTTGCGCCCGTGTCGATTAATTTGTCCAGATTGTCTGGCCCGGCCTCCAGTACGTCG
TCACTACGTGTTTTGTTCGGCATCGTGGTTTTTCTACCGTTGTAACAGTCCAGTTTACCT
ATCGTCCTTGTAATAAAATGTTGCCACCCCCNNCATAAAAAAAAAAA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)