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Oryza sativa
cluster # 2411 cluster # 2411       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2411#0 length = 2113 sequences # 1  
consensus_2411#1 length = 1938 sequences # 1  

consensusID : consensus_2411#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2113
fasta sequence
                              [TTGGAGAGTGCGGTCTCCTCTCCTCCCTCCCTGCTCGCGCTCTCAGTCTCCCCCATCCCCAATCACCTTACTAGCTTAGTAGCTTTGTGAATCAATCAAGGCCAGGGTTTGATCAGATCATCCTTCCCTCCCATTTGCCCATGCCTTGGCTTTGATCCGACCAGGCATGGAGGGCGGTGGCACGAGGACGCGCCGTCGCGCCGCCACCGCGAGCCCTGGACGCAACAAGGTCTGGGTCGAGCCACCGGGCAAGACTCATCACCTGCGCTCGCCGCCCCCGCCCCCTTCCCCGTCCTCCTCAAAGAGGGTGGCCGTCGTCTACTACCTCTGCAGCAATCGCCATCTCGAACACCCCCACTTCATCGAGGTGCCACTCGCCTCACCGGACGGCCTCTACCTGCGAGATGTGATTAACCGCCTCAACGTGCTGCGAGGGAAGGGCATGGCGGCAATGTACTCATGGTCGTGCAAGAGCAGGAGCTACAAGAATGGCTTCGTGTGGCACGACCTATCCGAGGACGATCTCGTCCTGCCCGCGCAAGGGAACGAGTACATCCTCAAGGGCTCCGAGCTCCTCGACCGATCACCGCCAGATCGACAGCAGAATGGCGTTGGCGAGCCCAAGGTTGAGACCCTCAAGCACCCTCCAGAAGAGTCCCCTCATTCGCGAGGATCGCAAGAAGGGTGCTCCTCCTCATCATCTCCATCTGCTGTTACAAAAGAGGCCTCCCCACCACCCCCTACACCACAGCCACAGCAGCAGGCACAATCGGCCACGTTGCTGCCTTCATCGTCAGCTTCTACTAACCGTGAGGATGACCAATGCCGGACTCCGCGCTCTGGCTCATCTGGAAACATGTCCCCTGAACCGGCAGGAAGAGTTGCTCCTCCATTATCAGAGGCAAGCTCTCCAGGACCTTTAGAGTACAGAGTTTGCAAGCCCATCGGAGCCCAGGACGCATCCACACAGACCGACGACAGTGAGAGGGATGCTCCTGAGAGGAATTCTCGTATGGCAGGAGTATGTACAGAGAATAGTACATCAGATTCTGAGATTCAGGAATGTCATCCAAGGAGCACACAACCATCTCCAAAGGGTCCTGGAGTTGTTCGAGAATCACCACCGGTGTGCTCCTCTGACGCTTCTCCAGGTGGTAGAGTTGAGACCTTGGAGTCCCTGATAAGGGCCGAAGCCAGTAGGAGGAGTAGCTTTAGGGCGCTAGAGGAGGAACATCTCTTTGCCCCAATGGGTGTAAAGTTCAAGCCTGCCAATTTGCTCATGCAGCTGATCACTTGTGGCTCTATTTCTGTTAAGGATCACCGGAGCTTTGGGCTCATCCCAACATACAGGCCTCGGTTTACACAAGTTGAGTTTCCTTCTCCAATGTTCTCTACTCCTTTGGCATTGCGACACCTCGACAACATTCCTTGTAATGCTAGAACAATTGGAATGAGAATTCCAGAATCAGAATATTTCAGTGGGAGCTTGGTCGAGACAAAGAAGCAGGATGAGTCAGGGAAAGGAGGAACACCAACACTTAAACGCTCATCATCTTGCAGTGAGGACAGAGTCTGTAGAGTATCGGATTCCAACAGGGACATGGAAAGTATGGCTGAATCAGGCAGCTTCAGATGTCTGCCACAGACAATCAAAATGATATCATGTAAGCAATCTAGAAGTGGAACAATATTGTCTCCCAACTCGGATGTGAGGAACAGCTGTAGTCGACAAGAGTGTAGTACTAGATCCTCACCACTTGGTTCATCAAAAAGTGCAAGCAATAGGATGACTGATTTATCACTTGGTAAACTATCTTCTTCAAGGGTGGAATCATTCCATGAGGAAAAGGAGAAGGTGATCAAGATAGAAGAAAGCTTGCTTCTGGAGCTCGGGTTATAATCCAATCTTCACCCTTGTGTGAAGTGAGTGATGACAGCACTGAATCACTGTAAGGGGCTGTGATTTTGTTTTCCTTTTGTTTTTCTGTGAGCTGGCTCATTGTAATTTGGTGTGTGTCTCAATAGTTCTGGGAGTAGCTTCAAAGTGCAATTTTATTCATTTTATGACATGTGTGATATTCAGCAATCAATTTATTACACCTTCACGAAGAAT]

[+] EMBL AK066884             [TTGGAGAGTGCGGTCTCCTCTCCTCCCTCCCTGCTCGCGCTCTCAGTCTCCCCCATCCCCAATCACCTTACTAGCTTAGTAGCTTTGTGAATCAATCAAGGCCAGGGTTTGATCAGATCATCCTTCCCTCCCATTTGCCCATGCCTTGGCTTTGATCCGACCAGGCATGGAGGGCGGTGGCACGAGGACGCGCCGTCGCGCCGCCACCGCGAGCCCTGGACGCAACAAGGTCTGGGTCGAGCCACCGGGCAAGACTCATCACCTGCGCTCGCCGCCCCCGCCCCCTTCCCCGTCCTCCTCAAAGAGGGTGGCCGTCGTCTACTACCTCTGCAGCAATCGCCATCTCGAACACCCCCACTTCATCGAGGTGCCACTCGCCTCACCGGACGGCCTCTACCTGCGAGATGTGATTAACCGCCTCAACGTGCTGCGAGGGAAGGGCATGGCGGCAATGTACTCATGGTCGTGCAAGAGCAGGAGCTACAAGAATGGCTTCGTGTGGCACGACCTATCCGAGGACGATCTCGTCCTGCCCGCGCAAGGGAACGAGTACATCCTCAAGGGCTCCGAGCTCCTCGACCGATCACCGCCAGATCGACAGCAGAATGGCGTTGGCGAGCCCAAGGTTGAGACCCTCAAGCACCCTCCAGAAGAGTCCCCTCATTCGCGAGGATCGCAAGAAGGGTGCTCCTCCTCATCATCTCCATCTGCTGTTACAAAAGAGGCCTCCCCACCACCCCCTACACCACAGCCACAGCAGCAGGCACAATCGGCCACGTTGCTGCCTTCATCGTCAGCTTCTACTAACCGTGAGGATGACCAATGCCGGACTCCGCGCTCTGGCTCATCTGGAAACATGTCCCCTGAACCGGCAGGAAGAGTTGCTCCTCCATTATCAGAGGCAAGCTCTCCAGGACCTTTAGAGTACAGAGTTTGCAAGCCCATCGGAGCCCAGGACGCATCCACACAGACCGACGACAGTGAGAGGGATGCTCCTGAGAGGAATTCTCGTATGGCAGGAGTATGTACAGAGAATAGTACATCAGATTCTGAGATTCAGGAATGTCATCCAAGGAGCACACAACCATCTCCAAAGGGTCCTGGAGTTGTTCGAGAATCACCACCGGTGTGCTCCTCTGACGCTTCTCCAGGTGGTAGAGTTGAGACCTTGGAGTCCCTGATAAGGGCCGAAGCCAGTAGGAGGAGTAGCTTTAGGGCGCTAGAGGAGGAACATCTCTTTGCCCCAATGGGTGTAAAGTTCAAGCCTGCCAATTTGCTCATGCAGCTGATCACTTGTGGCTCTATTTCTGTTAAGGATCACCGGAGCTTTGGGCTCATCCCAACATACAGGCCTCGGTTTACACAAGTTGAGTTTCCTTCTCCAATGTTCTCTACTCCTTTGGCATTGCGACACCTCGACAACATTCCTTGTAATGCTAGAACAATTGGAATGAGAATTCCAGAATCAGAATATTTCAGTGGGAGCTTGGTCGAGACAAAGAAGCAGGATGAGTCAGGGAAAGGAGGAACACCAACACTTAAACGCTCATCATCTTGCAGTGAGGACAGAGTCTGTAGAGTATCGGATTCCAACAGGGACATGGAAAGTATGGCTGAATCAGGCAGCTTCAGATGTCTGCCACAGACAATCAAAATGATATCATGTAAGCAATCTAGAAGTGGAACAATATTGTCTCCCAACTCGGATGTGAGGAACAGCTGTAGTCGACAAGAGTGTAGTACTAGATCCTCACCACTTGGTTCATCAAAAAGTGCAAGCAATAGGATGACTGATTTATCACTTGGTAAACTATCTTCTTCAAGGGTGGAATCATTCCATGAGGAAAAGGAGAAGGTGATCAAGATAGAAGAAAGCTTGCTTCTGGAGCTCGGGTTATAATCCAATCTTCACCCTTGTGTGAAGTGAGTGATGACAGCACTGAATCACTGTAAGGGGCTGTGATTTTGTTTTCCTTTTGTTTTTCTGTGAGCTGGCTCATTGTAATTTGGTGTGTGTCTCAATAGTTCTGGGAGTAGCTTCAAAGTGCAATTTTATTCATTTTATGACATGTGTGATATTCAGCAATCAATTTATTACACCTTCACGAAGAAT]


>consensus_2411#0 TTGGAGAGTGCGGTCTCCTCTCCTCCCTCCCTGCTCGCGCTCTCAGTCTCCCCCATCCCC AATCACCTTACTAGCTTAGTAGCTTTGTGAATCAATCAAGGCCAGGGTTTGATCAGATCA TCCTTCCCTCCCATTTGCCCATGCCTTGGCTTTGATCCGACCAGGCATGGAGGGCGGTGG CACGAGGACGCGCCGTCGCGCCGCCACCGCGAGCCCTGGACGCAACAAGGTCTGGGTCGA GCCACCGGGCAAGACTCATCACCTGCGCTCGCCGCCCCCGCCCCCTTCCCCGTCCTCCTC AAAGAGGGTGGCCGTCGTCTACTACCTCTGCAGCAATCGCCATCTCGAACACCCCCACTT CATCGAGGTGCCACTCGCCTCACCGGACGGCCTCTACCTGCGAGATGTGATTAACCGCCT CAACGTGCTGCGAGGGAAGGGCATGGCGGCAATGTACTCATGGTCGTGCAAGAGCAGGAG CTACAAGAATGGCTTCGTGTGGCACGACCTATCCGAGGACGATCTCGTCCTGCCCGCGCA AGGGAACGAGTACATCCTCAAGGGCTCCGAGCTCCTCGACCGATCACCGCCAGATCGACA GCAGAATGGCGTTGGCGAGCCCAAGGTTGAGACCCTCAAGCACCCTCCAGAAGAGTCCCC TCATTCGCGAGGATCGCAAGAAGGGTGCTCCTCCTCATCATCTCCATCTGCTGTTACAAA AGAGGCCTCCCCACCACCCCCTACACCACAGCCACAGCAGCAGGCACAATCGGCCACGTT GCTGCCTTCATCGTCAGCTTCTACTAACCGTGAGGATGACCAATGCCGGACTCCGCGCTC TGGCTCATCTGGAAACATGTCCCCTGAACCGGCAGGAAGAGTTGCTCCTCCATTATCAGA GGCAAGCTCTCCAGGACCTTTAGAGTACAGAGTTTGCAAGCCCATCGGAGCCCAGGACGC ATCCACACAGACCGACGACAGTGAGAGGGATGCTCCTGAGAGGAATTCTCGTATGGCAGG AGTATGTACAGAGAATAGTACATCAGATTCTGAGATTCAGGAATGTCATCCAAGGAGCAC ACAACCATCTCCAAAGGGTCCTGGAGTTGTTCGAGAATCACCACCGGTGTGCTCCTCTGA CGCTTCTCCAGGTGGTAGAGTTGAGACCTTGGAGTCCCTGATAAGGGCCGAAGCCAGTAG GAGGAGTAGCTTTAGGGCGCTAGAGGAGGAACATCTCTTTGCCCCAATGGGTGTAAAGTT CAAGCCTGCCAATTTGCTCATGCAGCTGATCACTTGTGGCTCTATTTCTGTTAAGGATCA CCGGAGCTTTGGGCTCATCCCAACATACAGGCCTCGGTTTACACAAGTTGAGTTTCCTTC TCCAATGTTCTCTACTCCTTTGGCATTGCGACACCTCGACAACATTCCTTGTAATGCTAG AACAATTGGAATGAGAATTCCAGAATCAGAATATTTCAGTGGGAGCTTGGTCGAGACAAA GAAGCAGGATGAGTCAGGGAAAGGAGGAACACCAACACTTAAACGCTCATCATCTTGCAG TGAGGACAGAGTCTGTAGAGTATCGGATTCCAACAGGGACATGGAAAGTATGGCTGAATC AGGCAGCTTCAGATGTCTGCCACAGACAATCAAAATGATATCATGTAAGCAATCTAGAAG TGGAACAATATTGTCTCCCAACTCGGATGTGAGGAACAGCTGTAGTCGACAAGAGTGTAG TACTAGATCCTCACCACTTGGTTCATCAAAAAGTGCAAGCAATAGGATGACTGATTTATC ACTTGGTAAACTATCTTCTTCAAGGGTGGAATCATTCCATGAGGAAAAGGAGAAGGTGAT CAAGATAGAAGAAAGCTTGCTTCTGGAGCTCGGGTTATAATCCAATCTTCACCCTTGTGT GAAGTGAGTGATGACAGCACTGAATCACTGTAAGGGGCTGTGATTTTGTTTTCCTTTTGT TTTTCTGTGAGCTGGCTCATTGTAATTTGGTGTGTGTCTCAATAGTTCTGGGAGTAGCTT CAAAGTGCAATTTTATTCATTTTATGACATGTGTGATATTCAGCAATCAATTTATTACAC CTTCACGAAGAAT



consensusID : consensus_2411#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1938
fasta sequence
                              [CGCGGTCTCCTCTCCTCCCTCCCTGCTCGCGCTCTCAGTCTCCCCCATCCCCAATCACCTTACTAGCTTAGTAGCTTTGTGAATCAATCAAGGCCAGGGTTTGATCAGATCATCCTTCCCTCCCATTTGCCCATGCCTTGGCTTTGATCCGACCAGGCATGGAGGGCGGTGGCACGAGGACGCGCCGTCGCGCCGCCACCGCGAGCCCTGGACGCAACAAGGTCTGGGTCGAGCCACCGGGCAAGACTCATCACCTGCGCTCGCCGCCCCCGCCCCCTTCCCCGTCCTCCTCAAAGAGGGTGGCCGTCGTCTACTACCTCTGCCGCAATCGCCATCTCGAACACCCCCACTTCATCGAGGTGCCACTCGCCTCACCGGACGGCCTCTACCTGCGAGGTCTGTATCCTTCTCTTTTTCTTGTTCAAGCTTCAGTTTTTTTCTTTTTCCCCTTTTCGATCCCTACCAATGATGCGGGAGGCGTTGATGCAGATGTGATTAACCGCCTCAACGTGCTGCGAGGGAAGGGCATGGCGGCAATGTACTCATGGTCGTGCAAGAGGAGCTACAAGAATGGCTTCGTGTGGCACGACCTATCCGAGGACGATCTCGTCCTGCCCGCGCAAGGGAACGAGTACATCCTCAAGGGCTCCGAGCTCCTCGACCGATCACCGCCAGATCGACAGCAGAATGGCGTTGGCGAGCCCAAGGTTGAGACCCTCAAGCACCCTCCAGAAGAGTCCCCTCATTCGCGAGGATCGCAAGAAGGGTGCTCCTCCTCATCATCTCCATCTGCTGTTACAAAAGAGGCCTCCCCACCACCCCCTACACCACAGCCACAGCAGCAGGCACAATCGGCCACGTTGCTGCCTTCATCGTCAGCTTCTACTAACCGTGAGGATGACCAATGCCGGACTCCGCGCTCTGGCTCATCTGGAAACATTTCCCCTGAACCGGCAGGAAGAGTTGCTCCTCCATTATCAGAGGCAAGCTCTCCAGGACCTTTAGAGTACAGAGTTTGCAAGCCCATCGGAGCCCAGGACGCATCCACACAGACCGACGACAGTGAGAGGGATGCTCCTGAGAGGAATTCTCGTATGGCAGGAGTATGTACAGAGAATAGTACATCAGATTCTGAGATTCAGGAATGTCATCCAAGGAGCACACAACCATCTCCAAAGGGTCCTGGAGTTGTTCGAGAATCACCACCGGTGTGCTCCTCTGACGCTTCTCCAGGTGGTAGAGTTGAGACCTTGGAGTCCCTGATAAGGGCCGAAGCCAGTAGGAGGAGTAGCTTTAGGGCGCTAGAGGAGGAACATCTCTTTGCCCCAATGGGTGTAAAGTTCAAGCCTGCCAATTTGCTCATGCAGCTGATCACTTGTGGCTCTATTTCTGTTAAGGATCACCGGAGCTTTGGGCTCATCCCAACATACAGGCCTCGGTTTACACAAGTTGAGTTTCCTTCTCCAATGTTCTCTACTCCTTTGGCATTGCGACACCTCGACAACATTCCTTGTAATGCTAGAACAATTGGAATGAGAATTCCAGAATCAGAATATTTCAGTGGAAGCTTGGTCGAGACAAAGAAGCAGGATGAGTCAGGGAAAGGAGGAACACCAACACTTAAACGCTCATCATCTTGCAGTGAGGACAGGTATGTCATCGTCTAGCTTATTCTGATATTGGACTATGGTGTTGGCAATATGCAATTCAATTCACGGTTACATGTCAAGTACTGTAGTTTATGATGTCGTATCTTACTGATACAGTGGCCTTTCTCATTGAACGCCTGAGCTAACATTGGTAAGTTGCACTAAATGTTGAACATTTCAATGTGTTGTACAGCATAAGTTAATTTCTCAATGTCCATCTTGTACTGTCTATGGTGTCCTGTACTGAAGGCAGGAAAGAAGAAAATAGAACCCAAGAATAAGATAGTTC]

[+] EMBL AK107073             [CGCGGTCTCCTCTCCTCCCTCCCTGCTCGCGCTCTCAGTCTCCCCCATCCCCAATCACCTTACTAGCTTAGTAGCTTTGTGAATCAATCAAGGCCAGGGTTTGATCAGATCATCCTTCCCTCCCATTTGCCCATGCCTTGGCTTTGATCCGACCAGGCATGGAGGGCGGTGGCACGAGGACGCGCCGTCGCGCCGCCACCGCGAGCCCTGGACGCAACAAGGTCTGGGTCGAGCCACCGGGCAAGACTCATCACCTGCGCTCGCCGCCCCCGCCCCCTTCCCCGTCCTCCTCAAAGAGGGTGGCCGTCGTCTACTACCTCTGCCGCAATCGCCATCTCGAACACCCCCACTTCATCGAGGTGCCACTCGCCTCACCGGACGGCCTCTACCTGCGAGGTCTGTATCCTTCTCTTTTTCTTGTTCAAGCTTCAGTTTTTTTCTTTTTCCCCTTTTCGATCCCTACCAATGATGCGGGAGGCGTTGATGCAGATGTGATTAACCGCCTCAACGTGCTGCGAGGGAAGGGCATGGCGGCAATGTACTCATGGTCGTGCAAGAGGAGCTACAAGAATGGCTTCGTGTGGCACGACCTATCCGAGGACGATCTCGTCCTGCCCGCGCAAGGGAACGAGTACATCCTCAAGGGCTCCGAGCTCCTCGACCGATCACCGCCAGATCGACAGCAGAATGGCGTTGGCGAGCCCAAGGTTGAGACCCTCAAGCACCCTCCAGAAGAGTCCCCTCATTCGCGAGGATCGCAAGAAGGGTGCTCCTCCTCATCATCTCCATCTGCTGTTACAAAAGAGGCCTCCCCACCACCCCCTACACCACAGCCACAGCAGCAGGCACAATCGGCCACGTTGCTGCCTTCATCGTCAGCTTCTACTAACCGTGAGGATGACCAATGCCGGACTCCGCGCTCTGGCTCATCTGGAAACATTTCCCCTGAACCGGCAGGAAGAGTTGCTCCTCCATTATCAGAGGCAAGCTCTCCAGGACCTTTAGAGTACAGAGTTTGCAAGCCCATCGGAGCCCAGGACGCATCCACACAGACCGACGACAGTGAGAGGGATGCTCCTGAGAGGAATTCTCGTATGGCAGGAGTATGTACAGAGAATAGTACATCAGATTCTGAGATTCAGGAATGTCATCCAAGGAGCACACAACCATCTCCAAAGGGTCCTGGAGTTGTTCGAGAATCACCACCGGTGTGCTCCTCTGACGCTTCTCCAGGTGGTAGAGTTGAGACCTTGGAGTCCCTGATAAGGGCCGAAGCCAGTAGGAGGAGTAGCTTTAGGGCGCTAGAGGAGGAACATCTCTTTGCCCCAATGGGTGTAAAGTTCAAGCCTGCCAATTTGCTCATGCAGCTGATCACTTGTGGCTCTATTTCTGTTAAGGATCACCGGAGCTTTGGGCTCATCCCAACATACAGGCCTCGGTTTACACAAGTTGAGTTTCCTTCTCCAATGTTCTCTACTCCTTTGGCATTGCGACACCTCGACAACATTCCTTGTAATGCTAGAACAATTGGAATGAGAATTCCAGAATCAGAATATTTCAGTGGAAGCTTGGTCGAGACAAAGAAGCAGGATGAGTCAGGGAAAGGAGGAACACCAACACTTAAACGCTCATCATCTTGCAGTGAGGACAGGTATGTCATCGTCTAGCTTATTCTGATATTGGACTATGGTGTTGGCAATATGCAATTCAATTCACGGTTACATGTCAAGTACTGTAGTTTATGATGTCGTATCTTACTGATACAGTGGCCTTTCTCATTGAACGCCTGAGCTAACATTGGTAAGTTGCACTAAATGTTGAACATTTCAATGTGTTGTACAGCATAAGTTAATTTCTCAATGTCCATCTTGTACTGTCTATGGTGTCCTGTACTGAAGGCAGGAAAGAAGAAAATAGAACCCAAGAATAAGATAGTTC]


>consensus_2411#1 CGCGGTCTCCTCTCCTCCCTCCCTGCTCGCGCTCTCAGTCTCCCCCATCCCCAATCACCT TACTAGCTTAGTAGCTTTGTGAATCAATCAAGGCCAGGGTTTGATCAGATCATCCTTCCC TCCCATTTGCCCATGCCTTGGCTTTGATCCGACCAGGCATGGAGGGCGGTGGCACGAGGA CGCGCCGTCGCGCCGCCACCGCGAGCCCTGGACGCAACAAGGTCTGGGTCGAGCCACCGG GCAAGACTCATCACCTGCGCTCGCCGCCCCCGCCCCCTTCCCCGTCCTCCTCAAAGAGGG TGGCCGTCGTCTACTACCTCTGCCGCAATCGCCATCTCGAACACCCCCACTTCATCGAGG TGCCACTCGCCTCACCGGACGGCCTCTACCTGCGAGGTCTGTATCCTTCTCTTTTTCTTG TTCAAGCTTCAGTTTTTTTCTTTTTCCCCTTTTCGATCCCTACCAATGATGCGGGAGGCG TTGATGCAGATGTGATTAACCGCCTCAACGTGCTGCGAGGGAAGGGCATGGCGGCAATGT ACTCATGGTCGTGCAAGAGGAGCTACAAGAATGGCTTCGTGTGGCACGACCTATCCGAGG ACGATCTCGTCCTGCCCGCGCAAGGGAACGAGTACATCCTCAAGGGCTCCGAGCTCCTCG ACCGATCACCGCCAGATCGACAGCAGAATGGCGTTGGCGAGCCCAAGGTTGAGACCCTCA AGCACCCTCCAGAAGAGTCCCCTCATTCGCGAGGATCGCAAGAAGGGTGCTCCTCCTCAT CATCTCCATCTGCTGTTACAAAAGAGGCCTCCCCACCACCCCCTACACCACAGCCACAGC AGCAGGCACAATCGGCCACGTTGCTGCCTTCATCGTCAGCTTCTACTAACCGTGAGGATG ACCAATGCCGGACTCCGCGCTCTGGCTCATCTGGAAACATTTCCCCTGAACCGGCAGGAA GAGTTGCTCCTCCATTATCAGAGGCAAGCTCTCCAGGACCTTTAGAGTACAGAGTTTGCA AGCCCATCGGAGCCCAGGACGCATCCACACAGACCGACGACAGTGAGAGGGATGCTCCTG AGAGGAATTCTCGTATGGCAGGAGTATGTACAGAGAATAGTACATCAGATTCTGAGATTC AGGAATGTCATCCAAGGAGCACACAACCATCTCCAAAGGGTCCTGGAGTTGTTCGAGAAT CACCACCGGTGTGCTCCTCTGACGCTTCTCCAGGTGGTAGAGTTGAGACCTTGGAGTCCC TGATAAGGGCCGAAGCCAGTAGGAGGAGTAGCTTTAGGGCGCTAGAGGAGGAACATCTCT TTGCCCCAATGGGTGTAAAGTTCAAGCCTGCCAATTTGCTCATGCAGCTGATCACTTGTG GCTCTATTTCTGTTAAGGATCACCGGAGCTTTGGGCTCATCCCAACATACAGGCCTCGGT TTACACAAGTTGAGTTTCCTTCTCCAATGTTCTCTACTCCTTTGGCATTGCGACACCTCG ACAACATTCCTTGTAATGCTAGAACAATTGGAATGAGAATTCCAGAATCAGAATATTTCA GTGGAAGCTTGGTCGAGACAAAGAAGCAGGATGAGTCAGGGAAAGGAGGAACACCAACAC TTAAACGCTCATCATCTTGCAGTGAGGACAGGTATGTCATCGTCTAGCTTATTCTGATAT TGGACTATGGTGTTGGCAATATGCAATTCAATTCACGGTTACATGTCAAGTACTGTAGTT TATGATGTCGTATCTTACTGATACAGTGGCCTTTCTCATTGAACGCCTGAGCTAACATTG GTAAGTTGCACTAAATGTTGAACATTTCAATGTGTTGTACAGCATAAGTTAATTTCTCAA TGTCCATCTTGTACTGTCTATGGTGTCCTGTACTGAAGGCAGGAAAGAAGAAAATAGAAC CCAAGAATAAGATAGTTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2411#0      TTGGAGAGTGCGGTCTCCTCTCCTCCCTCCCTGCTCGCGCTCTCAGTCTCCCCCATCCCC 60
consensus_2411#1      --------CGCGGTCTCCTCTCCTCCCTCCCTGCTCGCGCTCTCAGTCTCCCCCATCCCC 52
                               ***************************************************

consensus_2411#0      AATCACCTTACTAGCTTAGTAGCTTTGTGAATCAATCAAGGCCAGGGTTTGATCAGATCA 120
consensus_2411#1      AATCACCTTACTAGCTTAGTAGCTTTGTGAATCAATCAAGGCCAGGGTTTGATCAGATCA 112
                      ************************************************************

consensus_2411#0      TCCTTCCCTCCCATTTGCCCATGCCTTGGCTTTGATCCGACCAGGCATGGAGGGCGGTGG 180
consensus_2411#1      TCCTTCCCTCCCATTTGCCCATGCCTTGGCTTTGATCCGACCAGGCATGGAGGGCGGTGG 172
                      ************************************************************

consensus_2411#0      CACGAGGACGCGCCGTCGCGCCGCCACCGCGAGCCCTGGACGCAACAAGGTCTGGGTCGA 240
consensus_2411#1      CACGAGGACGCGCCGTCGCGCCGCCACCGCGAGCCCTGGACGCAACAAGGTCTGGGTCGA 232
                      ************************************************************

consensus_2411#0      GCCACCGGGCAAGACTCATCACCTGCGCTCGCCGCCCCCGCCCCCTTCCCCGTCCTCCTC 300
consensus_2411#1      GCCACCGGGCAAGACTCATCACCTGCGCTCGCCGCCCCCGCCCCCTTCCCCGTCCTCCTC 292
                      ************************************************************

consensus_2411#0      AAAGAGGGTGGCCGTCGTCTACTACCTCTGCAGCAATCGCCATCTCGAACACCCCCACTT 360
consensus_2411#1      AAAGAGGGTGGCCGTCGTCTACTACCTCTGCCGCAATCGCCATCTCGAACACCCCCACTT 352
                      ******************************* ****************************

consensus_2411#0      CATCGAGGTGCCACTCGCCTCACCGGACGGCCTCTACCTGCGAG---------------- 404
consensus_2411#1      CATCGAGGTGCCACTCGCCTCACCGGACGGCCTCTACCTGCGAGGTCTGTATCCTTCTCT 412
                      ********************************************                

consensus_2411#0      ------------------------------------------------------------
consensus_2411#1      TTTTCTTGTTCAAGCTTCAGTTTTTTTCTTTTTCCCCTTTTCGATCCCTACCAATGATGC 472
                                                                                  

consensus_2411#0      -----------------ATGTGATTAACCGCCTCAACGTGCTGCGAGGGAAGGGCATGGC 447
consensus_2411#1      GGGAGGCGTTGATGCAGATGTGATTAACCGCCTCAACGTGCTGCGAGGGAAGGGCATGGC 532
                                       *******************************************

consensus_2411#0      GGCAATGTACTCATGGTCGTGCAAGAGCAGGAGCTACAAGAATGGCTTCGTGTGGCACGA 507
consensus_2411#1      GGCAATGTACTCATGGTCGTGCAAGAG---GAGCTACAAGAATGGCTTCGTGTGGCACGA 589
                      ***************************   ******************************

consensus_2411#0      CCTATCCGAGGACGATCTCGTCCTGCCCGCGCAAGGGAACGAGTACATCCTCAAGGGCTC 567
consensus_2411#1      CCTATCCGAGGACGATCTCGTCCTGCCCGCGCAAGGGAACGAGTACATCCTCAAGGGCTC 649
                      ************************************************************

consensus_2411#0      CGAGCTCCTCGACCGATCACCGCCAGATCGACAGCAGAATGGCGTTGGCGAGCCCAAGGT 627
consensus_2411#1      CGAGCTCCTCGACCGATCACCGCCAGATCGACAGCAGAATGGCGTTGGCGAGCCCAAGGT 709
                      ************************************************************

consensus_2411#0      TGAGACCCTCAAGCACCCTCCAGAAGAGTCCCCTCATTCGCGAGGATCGCAAGAAGGGTG 687
consensus_2411#1      TGAGACCCTCAAGCACCCTCCAGAAGAGTCCCCTCATTCGCGAGGATCGCAAGAAGGGTG 769
                      ************************************************************

consensus_2411#0      CTCCTCCTCATCATCTCCATCTGCTGTTACAAAAGAGGCCTCCCCACCACCCCCTACACC 747
consensus_2411#1      CTCCTCCTCATCATCTCCATCTGCTGTTACAAAAGAGGCCTCCCCACCACCCCCTACACC 829
                      ************************************************************

consensus_2411#0      ACAGCCACAGCAGCAGGCACAATCGGCCACGTTGCTGCCTTCATCGTCAGCTTCTACTAA 807
consensus_2411#1      ACAGCCACAGCAGCAGGCACAATCGGCCACGTTGCTGCCTTCATCGTCAGCTTCTACTAA 889
                      ************************************************************

consensus_2411#0      CCGTGAGGATGACCAATGCCGGACTCCGCGCTCTGGCTCATCTGGAAACATGTCCCCTGA 867
consensus_2411#1      CCGTGAGGATGACCAATGCCGGACTCCGCGCTCTGGCTCATCTGGAAACATTTCCCCTGA 949
                      *************************************************** ********

consensus_2411#0      ACCGGCAGGAAGAGTTGCTCCTCCATTATCAGAGGCAAGCTCTCCAGGACCTTTAGAGTA 927
consensus_2411#1      ACCGGCAGGAAGAGTTGCTCCTCCATTATCAGAGGCAAGCTCTCCAGGACCTTTAGAGTA 1009
                      ************************************************************

consensus_2411#0      CAGAGTTTGCAAGCCCATCGGAGCCCAGGACGCATCCACACAGACCGACGACAGTGAGAG 987
consensus_2411#1      CAGAGTTTGCAAGCCCATCGGAGCCCAGGACGCATCCACACAGACCGACGACAGTGAGAG 1069
                      ************************************************************

consensus_2411#0      GGATGCTCCTGAGAGGAATTCTCGTATGGCAGGAGTATGTACAGAGAATAGTACATCAGA 1047
consensus_2411#1      GGATGCTCCTGAGAGGAATTCTCGTATGGCAGGAGTATGTACAGAGAATAGTACATCAGA 1129
                      ************************************************************

consensus_2411#0      TTCTGAGATTCAGGAATGTCATCCAAGGAGCACACAACCATCTCCAAAGGGTCCTGGAGT 1107
consensus_2411#1      TTCTGAGATTCAGGAATGTCATCCAAGGAGCACACAACCATCTCCAAAGGGTCCTGGAGT 1189
                      ************************************************************

consensus_2411#0      TGTTCGAGAATCACCACCGGTGTGCTCCTCTGACGCTTCTCCAGGTGGTAGAGTTGAGAC 1167
consensus_2411#1      TGTTCGAGAATCACCACCGGTGTGCTCCTCTGACGCTTCTCCAGGTGGTAGAGTTGAGAC 1249
                      ************************************************************

consensus_2411#0      CTTGGAGTCCCTGATAAGGGCCGAAGCCAGTAGGAGGAGTAGCTTTAGGGCGCTAGAGGA 1227
consensus_2411#1      CTTGGAGTCCCTGATAAGGGCCGAAGCCAGTAGGAGGAGTAGCTTTAGGGCGCTAGAGGA 1309
                      ************************************************************

consensus_2411#0      GGAACATCTCTTTGCCCCAATGGGTGTAAAGTTCAAGCCTGCCAATTTGCTCATGCAGCT 1287
consensus_2411#1      GGAACATCTCTTTGCCCCAATGGGTGTAAAGTTCAAGCCTGCCAATTTGCTCATGCAGCT 1369
                      ************************************************************

consensus_2411#0      GATCACTTGTGGCTCTATTTCTGTTAAGGATCACCGGAGCTTTGGGCTCATCCCAACATA 1347
consensus_2411#1      GATCACTTGTGGCTCTATTTCTGTTAAGGATCACCGGAGCTTTGGGCTCATCCCAACATA 1429
                      ************************************************************

consensus_2411#0      CAGGCCTCGGTTTACACAAGTTGAGTTTCCTTCTCCAATGTTCTCTACTCCTTTGGCATT 1407
consensus_2411#1      CAGGCCTCGGTTTACACAAGTTGAGTTTCCTTCTCCAATGTTCTCTACTCCTTTGGCATT 1489
                      ************************************************************

consensus_2411#0      GCGACACCTCGACAACATTCCTTGTAATGCTAGAACAATTGGAATGAGAATTCCAGAATC 1467
consensus_2411#1      GCGACACCTCGACAACATTCCTTGTAATGCTAGAACAATTGGAATGAGAATTCCAGAATC 1549
                      ************************************************************

consensus_2411#0      AGAATATTTCAGTGGGAGCTTGGTCGAGACAAAGAAGCAGGATGAGTCAGGGAAAGGAGG 1527
consensus_2411#1      AGAATATTTCAGTGGAAGCTTGGTCGAGACAAAGAAGCAGGATGAGTCAGGGAAAGGAGG 1609
                      *************** ********************************************

consensus_2411#0      AACACCAACACTTAAACGCTCATCATCTTGCAGTGAGGACAGAGTCTGTAGAGTATCGGA 1587
consensus_2411#1      AACACCAACACTTAAACGCTCATCATCTTGCAGTGAGGACAG-GTATGTC-ATCGTCTAG 1667
                      ****************************************** ** ***  *   **   

consensus_2411#0      TTCCAACAGGGACATGGAAAGTATGGCTGAATCAGGCAGCTTCAGATGTCTGCCACA-GA 1646
consensus_2411#1      CTTATTCTGATATTGGACTATGGTGTTGGCAATATGCAA-TTCAATTCACGGTTACATGT 1726
                       *    * *  *   *   *   **   * *  * ***  ****  *  * *  *** * 

consensus_2411#0      CAATCAAAATGATATCATGTAAGCAATCTAGAAGTGGAACAATATTGTCTCCCAACTCGG 1706
consensus_2411#1      CAAGTACTGTAGT-TTATG-ATGTCGTATCTTACTGATACAGTGGCCTTTCTCA--TTGA 1782
                      ***  *   *  * * *** * *   * *   * **  *** *    * ** **  * * 

consensus_2411#0      ATGTGAGGAACAGCTGTAGTCGACAAGAGTGTAGTACTAGATCCTCACCACTT-GGTTCA 1765
consensus_2411#1      ACGCCTG----AGCTAACATTGGTAAG----TTGCACTAAATGTTGAACATTTCAATGTG 1834
                      * *   *    ****    * *  ***    * * **** **  * * ** **   *   

consensus_2411#0      TCAAAAAGTGCAAGCAATAGGATGACTGATTTATCACTTGGTA--AACTATCTTCTTCAA 1823
consensus_2411#1      TTGTACAGCATAAGTTA----ATTTCTCAATGTCCATCTTGTACTGTCTATGGTGTCCTG 1890
                      *   * **   ***  *    **  ** * *   **  * ***    ****  * * *  

consensus_2411#0      GGGTGGAATCATTCCATGAGGAAAAGGAGAAGGTGATCAAGATAGAAGAAAGCTTGCTTC 1883
consensus_2411#1      TACTGAAGGCA-------GGAAAGAAGAAAATAGAACCCAAGAATAAGATAGTTC----- 1938
                         ** *  **        * ** * ** **    * * *   * **** ** *      

consensus_2411#0      TGGAGCTCGGGTTATAATCCAATCTTCACCCTTGTGTGAAGTGAGTGATGACAGCACTGA 1943
consensus_2411#1      ------------------------------------------------------------
                                                                                  

consensus_2411#0      ATCACTGTAAGGGGCTGTGATTTTGTTTTCCTTTTGTTTTTCTGTGAGCTGGCTCATTGT 2003
consensus_2411#1      ------------------------------------------------------------
                                                                                  

consensus_2411#0      AATTTGGTGTGTGTCTCAATAGTTCTGGGAGTAGCTTCAAAGTGCAATTTTATTCATTTT 2063
consensus_2411#1      ------------------------------------------------------------
                                                                                  

consensus_2411#0      ATGACATGTGTGATATTCAGCAATCAATTTATTACACCTTCACGAAGAAT 2113
consensus_2411#1      --------------------------------------------------
                                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)