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Oryza sativa
cluster # 2447 cluster # 2447       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2447#0 length = 1161 sequences # 2  

consensusID : consensus_2447#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1161
fasta sequence
                              [TTCGTCACCGCCGAATCCCCCAGCAGCCAGCCATGTCGTCGTCGGCGTCGCGCGCCGCCAGCCTCCTCCGCCGCACATCCTCCGCCCTGTCCCGCCGCTGCGCCCACTCCTCCTCCGCCGCCGCGCCGTCCCGCCCGCCCGTTCCGCTCCCACGTTTCCGCGCCGCCGCCGCCGCCGCCTCCTCCTCGCCGTCCTCTGGGATCACCTCCCGCCGCTTCCTCGCGTCGAAATCCCCGTCGTCGTCGTCGCCCTCCAAGGCCTCCGCCGACGAGAACCTGGTGCGGGTCATCGACTCCGAGATCGAGTGCATTGTTCAGTCGGAGGAGGGCGCCGCCTCCGCGAAGCAAATTGATCTACCAGAAGACTTCCCTTTTGAGATAATCGACAATCCTGGTGACCAATCCATAACACTCAAAAGAGAAATTGCAGGAGAGACTATTAAAGCTACTGTCTACACAAACTTTGATACACAAGATTTGAATGAGGATGGCGATGATAATGAGAACAATGAGGAATCTTTTAAGCCAGCAATCCAGATGGTCGTCACTGTTGAGAAACCAGAAGCCTCCATCTTGGAATTTGAATGCCACTTCAATGATGATGAACTGGCAATTGAAAGTATGAGGATGCTGGATCAAAATAATAGTGATGCGGAGAATTTGTATGTGGGACCGACATTTCAGGATCTTGATGAGAGCTTGCAGAAGGCCTTGCACCGGTATCTCGAAGTGAGGGGAATCAAGCACTCACTGCATGACTGGCTGTGCGAGTACATGATGAGCAAGGATGAGAAGGAGTATCTGGTTTGGTTGAAGAGCATGAAAGAATTCGTTGGGAATTGAGTGCCGGTGCGTAATGTTTGTCCCTCATAATTATCCAGAGCTACATTGCATAGAAGTCACGTTTGGTGAAAGACCATATGGTGGTTTTATTTGTCATAAATCCTTGCTGCTGTTACCCAGCACTGTTTGCTACTAGCTAGCTCGCCTTTTATTTAATCCCTTTGATCTTTGGATGATTGTGATTATTTTGCTCTTGTGCGTGGAGTTTTTGAGTACTTACTGTCGAAGTGTCATCATAATTTCAACGTGCTGTCTCCACACCTTCTCCAGAAATTATTCTGTTTTGTGCATTCGTGCACGCATTGTGCGTTCACAATGG]

[+] EMBL AK068142             [TTCGTCACCGCCGAATCCCCCAGCAGCCAGCCATGTCGTCGTCGGCGTCGCGCGCCGCCAGCCTCCTCCGCCGCACATCCTCCGCCCTGTCCCGCCGCTGCGCCCACTCCTCCTCCGCCGCCGCGCCGTCCCGCCCGCCCGTTCCGCTCCCACGTTTCCGCGCCGCCGCCGCCGCCGCCTCCTCCTCGCCGTCCTCTGGGATCACCTCCCGCCGCTTCCTCGCGTCGAAATCCCCGTCGTCGTCGTCGCCCTCCAAGGCCTCCGCCGACGAGAACCTGGTGCGGGTCATCGACTCCGAGATCGAGTGCATTGTTCAGTCGGAGGAGGGCGCCGCCTCCGCGAAGCAAATTGATCTACCAGAAGACTTCCCTTTTGAGATAATCGACAATCCTGGTGACCAATCCATAACACTCAAAAGAGAAATTGCAGGAGAGACTATTAAAGCTACTGTCTACACAAACTTTGATACACAAGATTTGAATGAGGATGGCGATGATAATGAGAACAATGAGGAATCTTTTAAGCCAGCAATCCAGATGGTCGTCACTGTTGAGAAACCAGAAGCCTCCATCTTGGAATTTGAATGCCACTTCAATGATGATGAACTGGCAATTGAAAGTATGAGGATGCTGGATCAAAATAATAGTGATGCGGAGAATTTGTATGTGGGACCGACATTTCAGGATCTTGATGAGAGCTTGCAGAAGGCCTTGCACCGGTATCTCGAAGTGAGGGGAATCAAGCACTCACTGCATGACTGGCTGTGCGAGTACATGATGAGCAAGGATGAGAAGGAGTATCTGGTTTGGTTGAAGAGCATGAAAGAATTCGTTGGGAATTGAGTGCCGGTGCGTAATGTTTGTCCCTCATAATTATCCAGAGCTACATTGCATAGAAGTCACGTTTGGTGAAAGACCATATGGTGGTTTTATTTGTCATAAATCCTTGCTGCTGTTACCCAGCACTGTTTGCTACTAGCTAGCTCGCCTTTTATTTAATCCCTTTGATCTTTGGATGATTGTGATTATTTTGCTCTTGTGCGTGGAGTTTTTGAGTACTTACTGTCGAAGTGTCATCATAATTTCAACGTGCTGTCTCCACACCTTCTCCAGAAATTATTCTGTTTTGTGCATTCGTGCACGCATTGTGCGTTCACAATGG]
[+] EMBL AK071483             [      ACCGCCGAATCCCCCAGCAGCCAGCCATGTCGTCGTCGGCGTCGCGCGCCGCCAGCCTCCTCCGCCGCACATCCTCCGCCCTGTCCCGCCGCTGCGCCCACTCCTCCTCCGCCGCCGCGCCGTCCCGCCCGCCCGTTCCGCTCCCACGTTTCCGCGCCGCCGCCGCCGCCGCCTCCTCCTCGCCGTCCTCTGGGATCACCTCCCGCCGCTTCCTCGCGTCGAAATCCCCGTCGTCGTCGTCGCCCTCCAAGGCCTCCGCCGACGAGAACCTGGTGCGGGTCATCGACTCCGAGATCGAGTGCATTGTTCAGTCGGAGGAGGGCGCCGCCTCCGCGAAGCAAATTGATCTACCAGAAGACTTCCCTTTTGAGATAATCGACAATCCTGGTGACCAATCCATAACACTCAAAAGAGAAATTGCAGGAGAGACTATTAAAGCTACTGTCTACACAAACTTTGATACACAAGATTTGAATGAGGATGGCGATGATAATGAGAACAATGAGGAATCTTTTAAGCCAGCAATCCAGATGGTCGTCACTGTTGAGAAACCAGAAGCCTCCATCTTGGAATTTGAATGCCACTTCAATGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]


>consensus_2447#0 TTCGTCACCGCCGAATCCCCCAGCAGCCAGCCATGTCGTCGTCGGCGTCGCGCGCCGCCA GCCTCCTCCGCCGCACATCCTCCGCCCTGTCCCGCCGCTGCGCCCACTCCTCCTCCGCCG CCGCGCCGTCCCGCCCGCCCGTTCCGCTCCCACGTTTCCGCGCCGCCGCCGCCGCCGCCT CCTCCTCGCCGTCCTCTGGGATCACCTCCCGCCGCTTCCTCGCGTCGAAATCCCCGTCGT CGTCGTCGCCCTCCAAGGCCTCCGCCGACGAGAACCTGGTGCGGGTCATCGACTCCGAGA TCGAGTGCATTGTTCAGTCGGAGGAGGGCGCCGCCTCCGCGAAGCAAATTGATCTACCAG AAGACTTCCCTTTTGAGATAATCGACAATCCTGGTGACCAATCCATAACACTCAAAAGAG AAATTGCAGGAGAGACTATTAAAGCTACTGTCTACACAAACTTTGATACACAAGATTTGA ATGAGGATGGCGATGATAATGAGAACAATGAGGAATCTTTTAAGCCAGCAATCCAGATGG TCGTCACTGTTGAGAAACCAGAAGCCTCCATCTTGGAATTTGAATGCCACTTCAATGATG ATGAACTGGCAATTGAAAGTATGAGGATGCTGGATCAAAATAATAGTGATGCGGAGAATT TGTATGTGGGACCGACATTTCAGGATCTTGATGAGAGCTTGCAGAAGGCCTTGCACCGGT ATCTCGAAGTGAGGGGAATCAAGCACTCACTGCATGACTGGCTGTGCGAGTACATGATGA GCAAGGATGAGAAGGAGTATCTGGTTTGGTTGAAGAGCATGAAAGAATTCGTTGGGAATT GAGTGCCGGTGCGTAATGTTTGTCCCTCATAATTATCCAGAGCTACATTGCATAGAAGTC ACGTTTGGTGAAAGACCATATGGTGGTTTTATTTGTCATAAATCCTTGCTGCTGTTACCC AGCACTGTTTGCTACTAGCTAGCTCGCCTTTTATTTAATCCCTTTGATCTTTGGATGATT GTGATTATTTTGCTCTTGTGCGTGGAGTTTTTGAGTACTTACTGTCGAAGTGTCATCATA ATTTCAACGTGCTGTCTCCACACCTTCTCCAGAAATTATTCTGTTTTGTGCATTCGTGCA CGCATTGTGCGTTCACAATGG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)