Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 2503 cluster # 2503       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2503#0 length = 2186 sequences # 2  

consensusID : consensus_2503#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2186
fasta sequence
                              [GGCCACGCCACGGGTCCCGAGTAGGGAACCCCCCCTTCCACGCCCCCCCCGGCAATGTCGGCGCACCACCCGCCGCACGGCATCGCCGCCGGGGACGCCAGGAAGGCCCACCACCTCGGCGGCGACCCCAAGAACCTGTCGTGGTGCGGCGTCGGCGTCGGCGACCACCATTTCCTCCCCAGGAAGCTCGTCGGGGGCGGCGGCCCCTCCGCGGCGAAGCTCGCGCTCGTGTCCTTCCTCGCTGTCATCCTCGTCCTCGCCGTCGACCTGTCCCTCACCGGCGCCGGGGCGAACCGGCGGCTGCGGCTCCAATACCTGCATTACATCGGCGACGGCGGCGGGGGTGGCGGTGGTGGCGGGGTTGGTGGCGGTGGCGAAGAGGCCAAGAACAACGAGCTTCCTTGGCTCTCAGTGCCGGACCCGTCCAACTTCACGGAGGAGCTCATCGACCGGTGGCTGACGCCCGGGGGGACTCCGTGCCGCGACTCCCGTACGGCGAACATCTCCATCCCTGTTCTTGACGACGCCGCGGCGGCGGGCGAGGTGACCACGCTGGGCTCCGCCGAGATCCACGAGTTCACGTTCTGGGCGCTCGACGACGCCGGCCAGCGGCGCTGCCTTGGCGGGGACTTCTTCGAGATCGATCTCGCCGGGGACGAGTGGAAGTCGCGGCCCCCCGTCGTGGACCACGGCGATGGCTCCTACTCCTTCCGCCTCCAGGTCGCGCCGCGCTTCGCCGAGGGGGATTTCCGCCTCACCATCATCCTCCTGTTCCGCAGCTTCGAGGGCCTCAAGTTCTCCTCCCTGAGGTTCAAGTACCACGCCGAGATGCGCCGGATTCCCCTCCTGTTCGGGCCGAGCAACTCCACGCGCTTCCTCCCGGCATTGGAGACCTGCCGCGCCGCGGACTTCGCGCGCGACGTGTGGTCCGGCCGCTGGACGCGCCTCGCCAAGAACGACAGCTGCGAGGAGGTGGACGACGCCGGCAGGTACCGGTGCCTGGAGCCGCAGCACCCATGCGAGGCGCCATGGTGCGCGGGGCCACTGGGCGCGCTGGAGAGCAACGGGTGGGTCTACTCGGCGCACTGCTCGTTCAGCCTCTTCACGGCCGACGCGGCGTGGCGGTGCCTGGACGGCAAGTGGCTCTTCTTCTGGGGCGACTCCAACCACGTCGACACCATCCGCAACCTCCTGACCTTCGTCCTCGGCGTCACGAACACGTCCGCCGTGACGCGCCGGTTCGACGCCGCGTTCACGAACCCCAGTGGCGGGCCGGGGACTGTGAGGATCACGAGCATTTTCAATGGCCACTGGAACATGAGCATGAACTATCTTGGTCTGCATTCCCTCCGGAACAAGGGGTTCCAGCGTCTTGTCCGTTCATACTTCTTGGCTGAGGACCGTGCCCCGGACATTGTCATCCTCAACTCTGGCCTGCACGACGGGTGCTACTGGACCAGCGTCCGCGCATATGTGCAGGCTGCTGAGTATGCTGCACAATTCTGGGCTGGAGTTATGGCTGAAGTGCGGTCGCGTGGGCATGCCGTGCCGAGGATGTTCTACCGAACGACCATCGCGACCGGCGGGTATGCTCGGGACCTGGCATTCAATCCTAGCAAGATGGAGGCGTTCAATGGGGTGCTCGTCGAGAAGTTGAGGCGTCATGGGGTGCTCACTGGTGGGTTGATCGACAACTTCGATATGACCTTCCCATGGCACTATGACAATCGTTGCAATGATGGTGTTCACTATGGGCGTGCACCGGCGAAGTTGTTATGGCGGGATGGCAAGGTCGGGCACCAGTATTTCGTGGACCTCATGCTGGGGCATGTGCTCCTCAATGCCATCTGCAATGGATGAAGGTTCTTGCTTCCATGCTCAGTAAGTTTGTGCGGCTCAATCGTGTACACTAGAGTAGGATCCTCAGGGAATTGAATTTGCTTAGATGAAATTACTGGCATTGAATCAATTCCAGTTCCTGATATCATGTGTACATCGGATATGGGGGTGGGGCCTTAGCTGAAGCATGTATAGTGAGACATCTGATCTTTCGGCTATGTTGTTGGTTGGGATTTACTCTAGTGGGCGAGGAAGATCGAGTTCGATCGGAGCTAGCTATGAGTGAAAATCAGGTACATGTAAATACATACCAAGGCTGCTTGAGGAGGCTTAATGGATATACGAAT]

[+] EMBL AK100181             [GGCCACGCCACGGGTCCCGAGTAGGGAACCCCCCCTTCCACGCCCCCCCCGGCAATGTCGGCGCACCACCCGCCGCACGGCATCGCCGCCGGGGACGCCAGGAAGGCCCACCACCTCGGCGGCGACCCCAAGAACCTGTCGTGGTGCGGCGTCGGCGTCGGCGACCACCATTTCCTCCCCAGGAAGCTCGTCGGGGGCGGCGGCCCCTCCGCGGCGAAGCTCGCGCTCGTGTCCTTCCTCGCTGTCATCCTCGTCCTCGCCGTCGACCTGTCCCTCACCGGCGCCGGGGCGAACCGGCGGCTGCGGCTCCAATACCTGCATTACATCGGCGACGGCGGCGGGGGTGGCGGTGGTGGCGGGGTTGGTGGCGGTGGCGAAGAGGCCAAGAACAACGAGCTTCCTTGGCTCTCAGTGCCGGACCCGTCCAACTTCACGGAGGAGCTCATCGACCGGTGGCTGACGCCCGGGGGGACTCCGTGCCGCGACTCCCGTACGGCGAACATCTCCATCCCTGTTCTTGACGACGCCGCGGCGGCGGGCGAGGTGACCACGCTGGGCTCCGCCGAGATCCACGAGTTCACGTTCTGGGCGCTCGACGACGCCGGCCAGCGGCGCTGCCTTGGCGGGGACTTCTTCGAGATCGATCTCGCCGGGGACGAGTGGAAGTCGCGGCCCCCCGTCGTGGACCACGGCGATGGCTCCTACTCCTTCCGCCTCCAGGTCGCGCCGCGCTTCGCCGAGGGGGATTTCCGCCTCACCATCATCCTCCTGTTCCGCAGCTTCGAGGGCCTCAAGTTCTCCTCCCTGAGGTTCAAGTACCACGCCGAGATGCGCCGGATTCCCCTCCTGTTCGGGCCGAGCAACTCCACGCGCTTCCTCCCGGCATTGGAGACCTGCCGCGCCGCGGACTTCGCGCGCGACGTGTGGTCCGGCCGCTGGACGCGCCTCGCCAAGAACGACAGCTGCGAGGAGGTGGACGACGCCGGCAGGTACCGGTGCCTGGAGCCGCAGCACCCATGCGAGGCGCCATGGTGCGCGGGGCCACTGGGCGCGCTGGAGAGCAACGGGTGGGTCTACTCGGCGCACTGCTCGTTCAGCCTCTTCACGGCCGACGCGGCGTGGCGGTGCCTGGACGGCAAGTGGCTCTTCTTCTGGGGCGACTCCAACCACGTCGACACCATCCGCAACCTCCTGACCTTCGTCCTCGGCGTCACGAACACGTCCGCCGTGACGCGCCGGTTCGACGCCGCGTTCACGAACCCCAGTGGCGGGCCGGGGACTGTGAGGATCACGAGCATTTTCAATGGCCACTGGAACATGAGCATGAACTATCTTGGTCTGCATTCCCTCCGGAACAAGGGGTTCCAGCGTCTTGTCCGTTCATACTTCTTGGCTGAGGACCGTGCCCCGGACATTGTCATCCTCAACTCTGGCCTGCACGACGGGTGCTACTGGACCAGCGTCCGCGCATATGTGCAGGCTGCTGAGTATGCTGCACAATTCTGGGCTGGAGTTATGGCTGAAGTGCGGTCGCGTGGGCATGCCGTGCCGAGGATGTTCTACCGAACGACCATCGCGACCGGCGGGTATGCTCGGGACCTGGCATTCAATCCTAGCAAGATGGAGGCGTTCAATGGGGTGCTCGTCGAGAAGTTGAGGCGTCATGGGGTGCTCACTGGTGGGTTGATCGACAACTTCGATATGACCTTCCCATGGCACTATGACAATCGTTGCAATGATGGTGTTCACTATGGGCGTGCACCGGCGAAGTTGTTATGGCGGGATGGCAAGGTCGGGCACCAGTATTTCGTGGACCTCATGCTGGGGCATGTGCTCCTCAATGCCATCTGCAATGGATGAAGGTTCTTGCTTCCATGCTCAGTAAGTTTGTGCGGCTCAATCGTGTACACTAGAGTAGGATCCTCAGGGAATTGAATTTGCTTAGATGAAATTACTGGCATTGAATCAATTCCAGTTCCTGATATCATGTGTACATCGGATATGGGGGTGGGGCCTTAGCTGAAGCATGTATAGTGAGACATCTGATCTTTCGGCTATGTTGTTGGTTGGGATTTACTCTAGTGGGCGAGGAAGATCGAGTTCGATCGGAGCTAGCTATGAGTGAAAATCAGGTACATGTAAATACATACCAAGGCTGCTTGAGGAGGCTTAATGGATATACGAAT]
[+] EMBL AK069649             [GGCCACGCCACGGGTCCCGAGTAGGGAACCCCCCCTTCCACGCCCCCCCCGGCAATGTCGGCGCACCACCCGCCGCACGGCATCGCCGCCGGGGACGCCAGGAAGGCCCACCACCTCGGCGGCGACCCCAAGAACCTGTCGTGGTGCGGCGTCGGCGTCGGCGACCACCATTTCCTCCCCAGGAAGCTCGTCGGGGGCGGCGGCCCCTCCGCGGCGAAGCTCGCGCTCGTGTCCTTCCTCGCTGTCATCCTCGTCCTCGCCGTCGACCTGTCCCTCACCGGCGCCGGGGCGAACCGGCGGCTGCGGCTCCAATACCTGCATTACATCGGCGACGGCGGCGGGGGTGGCGGTGGTGGCGGGGTTGGTGGCGGTGGCGAAGAGGCCAAGAACAACGAGCTTCCTTGGCTCTCAGTGCCGGACCCGTCCAACTTCACGGAGGAGCTCATCGACCGGTGGCTGACGCCCGGGGGGACTCCGTGCCGCGACTCCCGTACGGCGAACATCTCCATCCCTGTTCTTGACGACGCCGCGGCGGCGGGCGAGGTGACCACGCTGGGCTCCGCCGAGATCCACGAGTTCACGTTCTGGGCGCTCGACGACGCCGGCCAGCGGCGCTGCCTTGGCGGGGACTTCTTCGAGATCGATCTCGCCGGGGACGAGTGGAAGTCGCGGCCCCCCGTCGTGGACCACGGCGATGGCTCCTACTCCTTCCGCCTCCAGGTCGCGCCGCGCTTCGCCGAGGGGGATTTCCGCCTCACCATCATCCTCCTGTTCCGCAGCTTCGAGGGCCTCAAGTTCTCCTCCCTGAGGTTCAAGTACCACGCCGAGATGCGCCGGATTCCCCTCCTGTTCGGGCCGAGCAACTCCACGCGCTTCCTCCCGGCATTGGAGACCTGCCGCGCCGCGGACTTCGCGCGCGACGTGTGGTCCGGCCGCTGGACGCGCCTCGCCAAGAACGACAGCTGCGAGGAGGTGGACGACGCCGGCAGGTACCGGTGCCTGGAGCCGCAGCACCCATGCGAGGCGCCATGGTGCGCGGGGCCACTGGGCGCGCTGGAGAGCAACGGGTGGGTCTACTCGGCGCACTGCTCGTTCAGCCTCTTCACGGCCGACGCGGCGTGGCGGTGCCTGGACGGCAAGTGGCTCTTCTTCTGGGGCGACTCCAACCACGTCGACACCATCCGCAACCTCCTGACCTTCGTCCTCGGCGTCACGAACACGTCCGCCGTGACGCGCCGGTTCGACGCCGCGTTCACGAACCCCAGTGGCGGGCCGGGGACTGTGAGGATCACGAGCATTTTCAATGGCCACTGGAACATGAGCATGAACTATCTTGGTCTGCATTCCCTCCGGAACAAGGGGTTCCAGCGTCTTGTCCGTTCATACTTCTTGGCTGAGGACCGTGCCCCGGACATTGTCATCCTCAACTCTGGCCTGCACGACGGGTGCTACTGGACCAGCGTCCGCGCATATGTGCAGGCTGCTGAGTATGCTGCACAATTCTGGGCTGGAGTTATGGCTGAAGTGCGGTCGCGTGGGCATGCCGTGCCGAGGATGTTCTACCGAACGACCATCGCGACCGGCGGGTATGCTCGGGACCTGGCATTCAATCCTAGCAAGATGGAGGCGTTCAATGGGGTGCTCGTCGAGAAGTTGAGGCGTCATGGGGTGCTCACTGGTGGGTTGATCGACAACTTCGATATGACCTTCCCATGGCACTATGACAATCGTTGCAATGATGGTGTTCACTATGGGCGTGCACCGGCGAAGTTGTTATGGCGGGATGGCAAGGTCGGGCACCAGTATTTCGTGGACCTCATGCTGGGGCATGTGCTCCTCAATGCCATCTGCAATGGATGAAGGTTCTTGCTTCCATGCTCAGTAAGTTTGTGCGGCTCAATCGTGTACACTAGAGTAGGATCCTCAGGGAATTGAATTTGCTTAGATGAAATTACTGGCATTGAATCAATTCCAGTTCCTGATATCATGTGTACATCGGATATGGGGGTGGGGCCTTAGCTGAAGCATGTATAGTGAGACATCTGATCTTTCGGCTATGTTGTTGGTTGGGATTTACTCTAGTGGGCGAGGAAGATCGAGTTCGATCGGAGCTAGCTATGAGTGAAAATCAGGTACATGTAAATACATACCAAGGCTGCTTGAGGAGGCTTAATGGATATACGAAT]


>consensus_2503#0 GGCCACGCCACGGGTCCCGAGTAGGGAACCCCCCCTTCCACGCCCCCCCCGGCAATGTCG GCGCACCACCCGCCGCACGGCATCGCCGCCGGGGACGCCAGGAAGGCCCACCACCTCGGC GGCGACCCCAAGAACCTGTCGTGGTGCGGCGTCGGCGTCGGCGACCACCATTTCCTCCCC AGGAAGCTCGTCGGGGGCGGCGGCCCCTCCGCGGCGAAGCTCGCGCTCGTGTCCTTCCTC GCTGTCATCCTCGTCCTCGCCGTCGACCTGTCCCTCACCGGCGCCGGGGCGAACCGGCGG CTGCGGCTCCAATACCTGCATTACATCGGCGACGGCGGCGGGGGTGGCGGTGGTGGCGGG GTTGGTGGCGGTGGCGAAGAGGCCAAGAACAACGAGCTTCCTTGGCTCTCAGTGCCGGAC CCGTCCAACTTCACGGAGGAGCTCATCGACCGGTGGCTGACGCCCGGGGGGACTCCGTGC CGCGACTCCCGTACGGCGAACATCTCCATCCCTGTTCTTGACGACGCCGCGGCGGCGGGC GAGGTGACCACGCTGGGCTCCGCCGAGATCCACGAGTTCACGTTCTGGGCGCTCGACGAC GCCGGCCAGCGGCGCTGCCTTGGCGGGGACTTCTTCGAGATCGATCTCGCCGGGGACGAG TGGAAGTCGCGGCCCCCCGTCGTGGACCACGGCGATGGCTCCTACTCCTTCCGCCTCCAG GTCGCGCCGCGCTTCGCCGAGGGGGATTTCCGCCTCACCATCATCCTCCTGTTCCGCAGC TTCGAGGGCCTCAAGTTCTCCTCCCTGAGGTTCAAGTACCACGCCGAGATGCGCCGGATT CCCCTCCTGTTCGGGCCGAGCAACTCCACGCGCTTCCTCCCGGCATTGGAGACCTGCCGC GCCGCGGACTTCGCGCGCGACGTGTGGTCCGGCCGCTGGACGCGCCTCGCCAAGAACGAC AGCTGCGAGGAGGTGGACGACGCCGGCAGGTACCGGTGCCTGGAGCCGCAGCACCCATGC GAGGCGCCATGGTGCGCGGGGCCACTGGGCGCGCTGGAGAGCAACGGGTGGGTCTACTCG GCGCACTGCTCGTTCAGCCTCTTCACGGCCGACGCGGCGTGGCGGTGCCTGGACGGCAAG TGGCTCTTCTTCTGGGGCGACTCCAACCACGTCGACACCATCCGCAACCTCCTGACCTTC GTCCTCGGCGTCACGAACACGTCCGCCGTGACGCGCCGGTTCGACGCCGCGTTCACGAAC CCCAGTGGCGGGCCGGGGACTGTGAGGATCACGAGCATTTTCAATGGCCACTGGAACATG AGCATGAACTATCTTGGTCTGCATTCCCTCCGGAACAAGGGGTTCCAGCGTCTTGTCCGT TCATACTTCTTGGCTGAGGACCGTGCCCCGGACATTGTCATCCTCAACTCTGGCCTGCAC GACGGGTGCTACTGGACCAGCGTCCGCGCATATGTGCAGGCTGCTGAGTATGCTGCACAA TTCTGGGCTGGAGTTATGGCTGAAGTGCGGTCGCGTGGGCATGCCGTGCCGAGGATGTTC TACCGAACGACCATCGCGACCGGCGGGTATGCTCGGGACCTGGCATTCAATCCTAGCAAG ATGGAGGCGTTCAATGGGGTGCTCGTCGAGAAGTTGAGGCGTCATGGGGTGCTCACTGGT GGGTTGATCGACAACTTCGATATGACCTTCCCATGGCACTATGACAATCGTTGCAATGAT GGTGTTCACTATGGGCGTGCACCGGCGAAGTTGTTATGGCGGGATGGCAAGGTCGGGCAC CAGTATTTCGTGGACCTCATGCTGGGGCATGTGCTCCTCAATGCCATCTGCAATGGATGA AGGTTCTTGCTTCCATGCTCAGTAAGTTTGTGCGGCTCAATCGTGTACACTAGAGTAGGA TCCTCAGGGAATTGAATTTGCTTAGATGAAATTACTGGCATTGAATCAATTCCAGTTCCT GATATCATGTGTACATCGGATATGGGGGTGGGGCCTTAGCTGAAGCATGTATAGTGAGAC ATCTGATCTTTCGGCTATGTTGTTGGTTGGGATTTACTCTAGTGGGCGAGGAAGATCGAG TTCGATCGGAGCTAGCTATGAGTGAAAATCAGGTACATGTAAATACATACCAAGGCTGCT TGAGGAGGCTTAATGGATATACGAAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)