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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 2520 cluster # 2520       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2520#0 length = 1190 sequences # 2  

consensusID : consensus_2520#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1190
fasta sequence
                              [AATTGTGCCCTGCAGATTGAGTTCTCGCCAGCAAGTCTTCTATCAAGCCATAAAGAATAAAATATCTCTTAACGAGTTGCTTGATGGAAGTCGTGGCAATCTAAATGATAAGAAATTACTTAGCCTGATGAATATTGTGATGCAGCTCCGGAAGGTCTGCAATCATCCAGAGCTGTTTGAGCGCAATGAGGGGAGCTCTTACTTTTACTTTGCTGACATCCCGAACTCACTTCTTTCTCCTGCATTTGGGGAATTGCAAGATGTGCATTATGCAGGGAAGAGGAATCCAATAATGTTTGAGATTCCAAAGTTAGTCTACAAAGGAATCGTCTCGAACATGGAAATGCCTGTGCGTGGTTGTGGATTTCTATATGGATCTTTCAACAGGATGTTTAATATATTTTCGCCAAGCTACATCCATCAATCAGCTTTTCCAGAAGCTATCTCACCAAATAATACTGTTCTGTTATCTGGTGCATTCGGTTTTACACGTTTAATAAATCTCTCCCCAGTTGAAGCTTCTTTCCTGGCCACTTGCTCATTATTCAACAGACTAGCATTCTCAGCAGTGCGATGGAACAAGAAGTACACCGATGAACTTGTGGATGTATTCCTTGACTCAGAAAGTACTGATCTTGAGTCCACTCATAATGATTTAACAACAGTTCGTGCTGTTGTTCGCTTGTTGCTTTCACCTACAAAAGCAGAGTCCAGTTTCCTAAGAACAAAGATTGAGACAGGCCCGAGTGATAGCCCATATGAAGCACTAGTGCTTTCTCACCATGAAAGGCTTGTGTCTAACATAAGACTTCTTCGTTCAACATATGCTTTTATTCCACCTGCTAGAGCACCACCGATAAATGTCTGGTGCGCAGACCGAAATTTTGCCTACAAGTTAACTGATGAGATGCATGATCCATTGGCCAAGAAACTGGTTCTGGGATTTGCTCGAACTTCTGAGTTCAATGGCCCTAGAGAACCAACCAGCCCTCATTCTCTGATAGAAGAATTACATACTGATTTGCCATTCCCCGAGCCGATGCTACAACTGCCATATAGGATATTTGGGTCATCTCCACCTATGAGTAACTTTGACCCAGCTAAAATGCTTACAGATTCTGGGAAGCTCCAAACCTTAGATATACTGCTGCGGCGCCTCCGAGCTGAGAATCACCGTGTGCTCTTATTTG]

[+] EMBL CB670917             [AATTGTGCCCTGCAGATTGAGTTCTCGCCAGCAAGTCTTCTATCAAGCCATAAAGAATAAAATATCTCTTAACGAGTTGCTTGATGGAAGTCGTGGCAATCTAAATGATAAGAAATTACTTAGCCTGATGAATATTGTGATGCAGCTCCGGAAGGTCTGCAATCATCCAGAGCTGTTTGAGCGCAATGAGGGGAGCTCTTACTTTTACTTTGCTGACATCCCGAACTCACTTCTTTCTCCTGCATTTGGGGAATTGCAAGATGTGCATTATGCAGGGAAGAGGAATCCAATAATGTTTGAGATTCCAAAGTTAGTCTACAAAGGAATCGTCTCGAACATGGAAATGCCTGTGCGTGGTTGTGGATTTCTATATGGATCTTTCAACAGGATGTTTAATATATTTTCGCCAAGCTACATCCATCAATCAGCTTTTCCAGAAGCTATCTCACCAAATAATACTGTTCTGTTATCTGGTGCATTCGGTTTTACACGTTTAATAAATCTCTCCCCAGTTGAAGCTTCTTTCCTGGCCACTTGCTCATTATTCAACAGACTAGCATTCTCAGCAGTGCGATGGAACAAGAAGTACACCGATGAACTTGTGGATGTATTCCTTGACTCAGAAAGTACTGATCTTGAGTCCACTCATAATGATTTAACAACAGTTCGTGCTGTTGTTCGCTTGTTGCTTTCACCTACAAAAGCAGAGTCCAGTTTCCTAAGAACAAAGATTGAGACAGGCCCGAGTGATAGCCCATATGAAGCACTAGTGCTTTCTCACCATGAAAGGCTT                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CF307466             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         acgaggGTATTCCTTGACTCAGAAAGTACTGATCTTGAGTCCACTCATAATGATTTAACAACAGTTCGTGCTGTTGTTCGCTTGTTGCTTTCACCTACAAAAGCAGAGTCCAGTTTCCTAAGAACAAAGATTGAGACAGGCCCGAGTGATAGCCCATATGAAGCACTAGTGCTTTCTGACCATGAAAGGCTTGTGTCTAACATAAGACTTCTTCGTTCAACATATGCTTTTATTCCACCTGCTAGAGCACCACCGATAAATGTCTGGTGCGCAGACCGAAATTTTGCCTACAAGTTAACTGATGAGATGCATGATCCATTGGCCAAGAAACTGGTTCTGGGATTTGCTCGAACTTCTGAGTTCAATGGCCCTAGAGAACCAACCAGCCCTCATTCTCTGATAGAAGAATTACATACTGATTTGCCATTCCCCGAGCCGATGCTACAACTGCCATATAGGATATTTGGGTCATCTCCACCTATGAGTAACTTTGACCCAGCTAAAATGCTTACAGATTCTGGGAAGCTCCAAACCTTAGATATACTGCTGCGGCGCCTCCGAGCTGAGAATCACCGTGTGCTCTTATTTG]


>consensus_2520#0 AATTGTGCCCTGCAGATTGAGTTCTCGCCAGCAAGTCTTCTATCAAGCCATAAAGAATAA AATATCTCTTAACGAGTTGCTTGATGGAAGTCGTGGCAATCTAAATGATAAGAAATTACT TAGCCTGATGAATATTGTGATGCAGCTCCGGAAGGTCTGCAATCATCCAGAGCTGTTTGA GCGCAATGAGGGGAGCTCTTACTTTTACTTTGCTGACATCCCGAACTCACTTCTTTCTCC TGCATTTGGGGAATTGCAAGATGTGCATTATGCAGGGAAGAGGAATCCAATAATGTTTGA GATTCCAAAGTTAGTCTACAAAGGAATCGTCTCGAACATGGAAATGCCTGTGCGTGGTTG TGGATTTCTATATGGATCTTTCAACAGGATGTTTAATATATTTTCGCCAAGCTACATCCA TCAATCAGCTTTTCCAGAAGCTATCTCACCAAATAATACTGTTCTGTTATCTGGTGCATT CGGTTTTACACGTTTAATAAATCTCTCCCCAGTTGAAGCTTCTTTCCTGGCCACTTGCTC ATTATTCAACAGACTAGCATTCTCAGCAGTGCGATGGAACAAGAAGTACACCGATGAACT TGTGGATGTATTCCTTGACTCAGAAAGTACTGATCTTGAGTCCACTCATAATGATTTAAC AACAGTTCGTGCTGTTGTTCGCTTGTTGCTTTCACCTACAAAAGCAGAGTCCAGTTTCCT AAGAACAAAGATTGAGACAGGCCCGAGTGATAGCCCATATGAAGCACTAGTGCTTTCTCA CCATGAAAGGCTTGTGTCTAACATAAGACTTCTTCGTTCAACATATGCTTTTATTCCACC TGCTAGAGCACCACCGATAAATGTCTGGTGCGCAGACCGAAATTTTGCCTACAAGTTAAC TGATGAGATGCATGATCCATTGGCCAAGAAACTGGTTCTGGGATTTGCTCGAACTTCTGA GTTCAATGGCCCTAGAGAACCAACCAGCCCTCATTCTCTGATAGAAGAATTACATACTGA TTTGCCATTCCCCGAGCCGATGCTACAACTGCCATATAGGATATTTGGGTCATCTCCACC TATGAGTAACTTTGACCCAGCTAAAATGCTTACAGATTCTGGGAAGCTCCAAACCTTAGA TATACTGCTGCGGCGCCTCCGAGCTGAGAATCACCGTGTGCTCTTATTTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)