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Oryza sativa
cluster # 2538 cluster # 2538       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2538#0 length = 2447 sequences # 2  

consensusID : consensus_2538#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2447
fasta sequence
                              [ATGCACCACCGGAACGCCTCACAGCCGTAGTCTTCCTTTCCGGTCCCGTGCATGCCCAGGACGCCATGGGCCACAACCGAGAATAGCATCAACCTTGCCACCGCTGCTGCTTCGCCGGCGCCAATGCCGATGTGAGCCCGGCCCGGCCGCCGCACCCCCCTCCCCCTACGGCGACGACGTCACGCGCGCGCGAGATGCCATTGTTGCTTCTGTGAGGGGGGCTCACCGGAACGCGTCGGCATTGACGACGACCCGGACGAACGCGCGGCAGCATGATGCCGCGCGTCCTCATGGCGTCTACGGAGGACACGGCCACGGCCCCTGCCGGTGGGCCGCCGGAGCCCCCGCCGCAGTCGTCGTCGGCCTCGCCGTCGCCTTCCCCTCCTCCTCCTCCACCGACACCGTCCTCGCCTCAGCGGCCTCCCCCGCCGCCGCCGCCGGCCACTCCGCCCCCGCCTCCTCCGGCATCTCCAGGCAAAAACCAGAGTCCCGCGTCGCCGTCCCAAGATTCACCTCCGCCAGTGGCGTCCCCGTCAGTATCCTCACCTCCTCCGGCACCGACGACACCGCCCTCTCCGCCCCCACCAAGCAAGTCCCCTCCACCGCCGTCTCCGCCTCCTACTACGTCGTCGACACCGCCATCGCATCAATCACCTCCGGAAGAAGGAACCTCGCCGCCACCTTCGCCATCATCAGGGGCTACAACACCTTCACCTCCCCCAAATGCGCAGTCGTCGTCGTCGTCTTCCACACCTCCTGCCGGCGCAGGAACCTCGCCACCTGCACCGCGCGAAATGCCATCGCCCGGGACGCCACCATCGCCGCCGACGACGCTTATTACGACACAGGCGCCGCCGATCCAGCCACCACCACCACCGGGCGGTAACAGCATGATCATGCCGAGCTCCCTAACTACAGCCGGCACGTCTCAGAGCCCGCCTGACGCCACCACCGCCGGCGCACCACCACCTCCGGCTCCATCGGTGGGAGCATGGGGCGGCAACGTGCCGAGCGGGTTGCTCATCGGTGTCGCCTTCGCCGGTTTCCTCCTGGCGTTGGCGTCCATGTTCTTGTTCTTGTGCATCAAGAACCGGTGGAAGAGGAGGCGGCGGCCGGCACAGGTGATGAACCTGGCGCGCAGGAGAACCCTCGTCGTGCCGGAGCGTGTGGCGTCGCCGGAAGTGTACCAGCCGTCGAACGGTCCGACGGCGTCGCCGAGCGGGACGAGCTCGTACGAGTTCTCCGGGACGACGTCGTGGTTCACGTACGATGAGCTGGCGGCGGTGACCGGCGGGTTCGCGGAGGAGAAAGTGATCGGCGAGGGCGGGTTCGGGAAGGTGTACATGGGGGCGCTGGGCGACGGGCGGTGCGTGGCGGTGAAGCAGCTCAAGGTGGGGAGCGGGCAGGGGGAGAAGGAGTTCCGCGCCGAGGTGGACACCATCAGCCGCGTCCACCACCGCCACCTCGTCACCCTCGTCGGCTACTCCGTCACCGAGCACCACCACCTCCTCGTCTACGAGTTCGTCTCCAACAAGACGCTCGACCATCACCTGCACGGAGGAGGCCTCCCCGTCATGGATTGGCCCAAGCGGATGAAGATTGCCATCGGATCAGCCCGTGGTTTGACCTACCTGCACGAAGACTGCCATCCTAGGATCATACATAGGGACATCAAGTCGGCCAACATCCTCCTGGATGACGCCTTCGAAGCAAAGGTCGCGGATTTCGGTCTTGCCAAATTCACCAACGATTCGGTGACTCATGTCTCGACGCGCGTGATGGGCACATTCGGGTACCTGGCGCCGGAGTACGCATCAAGCGGGAAGCTGACGGACAGATCGGACGTGTTTTCGTTCGGGGTGGTGCTGTTGGAGCTCATCACCGGGCGGAAGCCCGTGGACTCGTCTCAGCCCCTCGGAGAAGAGAGCTTAGTTGAATGGGCTCGGCCTCTCCTGGTGGACGCGTTGGAGACGGACGACTTCAGGGAGCTCGCTGACCCCGCGCTGGAGCGCCGCTACTCCAAGTCGGAGATGCGGAGGATGGTGGAGGCCGCGGCCGCTTGCATTCGCTACTCCGTCACCAAGAGACCAAGGATGGTGCAGGTGTGGCGATCGCTGGACGTGGAGGGGAGCTCGCCGGACCTGACCAACGGAGTGAAGCTTGGGCAGAGCATGGCGTACGACTCCAACCAGTACTCGGCGGACATCGAGCTCTTCCGGCGGATGGCGTTTGCCAACGACCTCTCCACCGCTGAGCTCGGCTACTCCGGCAAGGACGACGTACGCCGTCCGCCACGCTAGCAGCAGCTCCAGGACCAGGCCCAGCTGAGCACTAACGGCACATGCGCTGTTGTTAAATTTGTTGTCGTAACTAACACGCATGCATGTATGTAAGACGGGGTGGCAGAATTGGTGTATATATAAAAAGGCTTTGAATAGCAATCCTGT]

[+] EMBL AK070389             [ATGCACCACCGGAACGCCTCACAGCCGTAGTCTTCCTTTCCGGTCCCGTGCATGCCCAGGACGCCATGGGCCACAACCGAGAATAGCATCAACCTTGCCACCGCTGCTGCTTCGCCGGCGCCAATGCCGATGTGAGCCCGGCCCGGCCGCCGCACCCCCCTCCCCCTACGGCGACGACGTCACGCGCGCGCGAGATGCCATTGTTGCTTCTGTGAGGGGGGCTCACCGGAACGCGTCGGCATTGACGACGACCCGGACGAACGCGCGGCAGCATGATGCCGCGCGTCCTCATGGCGTCTACGGAGGACACGGCCACGGCCCCTGCCGGTGGGCCGCCGGAGCCCCCGCCGCAGTCGTCGTCGGCCTCGCCGTCGCCTTCCCCTCCTCCTCCTCCACCGACACCGTCCTCGCCTCAGCGGCCTCCCCCGCCGCCGCCGCCGGCCACTCCGCCCCCGCCTCCTCCGGCATCTCCAGGCAAAAACCAGAGTCCCGCGTCGCCGTCCCAAGATTCACCTCCGCCAGTGGCGTCCCCGTCAGTATCCTCACCTCCTCCGGCACCGACGACACCGCCCTCTCCGCCCCCACCAAGCAAGTCCCCTCCACCGCCGTCTCCGCCTCCTACTACGTCGTCGACACCGCCATCGCATCAATCACCTCCGGAAGAAGGAACCTCGCCGCCACCTTCGCCATCATCAGGGGCTACAACACCTTCACCTCCCCCAAATGCGCAGTCGTCGTCGTCGTCTTCCACACCTCCTGCCGGCGCAGGAACCTCGCCACCTGCACCGCGCGAAATGCCATCGCCCGGGACGCCACCATCGCCGCCGACGACGCTTATTACGACACAGGCGCCGCCGATCCAGCCACCACCACCACCGGGCGGTAACAGCATGATCATGCCGAGCTCCCTAACTACAGCCGGCACGTCTCAGAGCCCGCCTGACGCCACCACCGCCGGCGCACCACCACCTCCGGCTCCATCGGTGGGAGCATGGGGCGGCAACGTGCCGAGCGGGTTGCTCATCGGTGTCGCCTTCGCCGGTTTCCTCCTGGCGTTGGCGTCCATGTTCTTGTTCTTGTGCATCAAGAACCGGTGGAAGAGGAGGCGGCGGCCGGCACAGGTGATGAACCTGGCGCGCAGGAGAACCCTCGTCGTGCCGGAGCGTGTGGCGTCGCCGGAAGTGTACCAGCCGTCGAACGGTCCGACGGCGTCGCCGAGCGGGACGAGCTCGTACGAGTTCTCCGGGACGACGTCGTGGTTCACGTACGATGAGCTGGCGGCGGTGACCGGCGGGTTCGCGGAGGAGAAAGTGATCGGCGAGGGCGGGTTCGGGAAGGTGTACATGGGGGCGCTGGGCGACGGGCGGTGCGTGGCGGTGAAGCAGCTCAAGGTGGGGAGCGGGCAGGGGGAGAAGGAGTTCCGCGCCGAGGTGGACACCATCAGCCGCGTCCACCACCGCCACCTCGTCACCCTCGTCGGCTACTCCGTCACCGAGCACCACCACCTCCTCGTCTACGAGTTCGTCTCCAACAAGACGCTCGACCATCACCTGCACGGAGGAGGCCTCCCCGTCATGGATTGGCCCAAGCGGATGAAGATTGCCATCGGATCAGCCCGTGGTTTGACCTACCTGCACGAAGACTGCCATCCTAGGATCATACATAGGGACATCAAGTCGGCCAACATCCTCCTGGATGACGCCTTCGAAGCAAAGGTCGCGGATTTCGGTCTTGCCAAATTCACCAACGATTCGGTGACTCATGTCTCGACGCGCGTGATGGGCACATTCGGGTACCTGGCGCCGGAGTACGCATCAAGCGGGAAGCTGACGGACAGATCGGACGTGTTTTCGTTCGGGGTGGTGCTGTTGGAGCTCATCACCGGGCGGAAGCCCGTGGACTCGTCTCAGCCCCTCGGAGAAGAGAGCTTAGTTGAATGGGCTCGGCCTCTCCTGGTGGACGCGTTGGAGACGGACGACTTCAGGGAGCTCGCTGACCCCGCGCTGGAGCGCCGCTACTCCAAGTCGGAGATGCGGAGGATGGTGGAGGCCGCGGCCGCTTGCATTCGCTACTCCGTCACCAAGAGACCAAGGATGGTGCAGGTGTGGCGATCGCTGGACGTGGAGGGGAGCTCGCCGGACCTGACCAACGGAGTGAAGCTTGGGCAGAGCATGGCGTACGACTCCAACCAGTACTCGGCGGACATCGAGCTCTTCCGGCGGATGGCGTTTGCCAACGACCTCTCCACCGCTGAGCTCGGCTACTCCGGCAAGGACGACGTACGCCGTCCGCCACGCTAGCAGCAGCTCCAGGACCAGGCCCAGCTGAGCACTAACGGCACATGCGCTGTTGTTAAATTTGTTGTCGTAACTAACACGCATGCATGTATGTAAGACGGGGTGGCAGAATTGGTGTATATATAAAAAGGCTTTGAATAGCAATCCTGT]
[+] EMBL AK099276             [                                                                         CAACCGAGAATAGCATCAACCTTGCCACCGCTGCTGCTTCGCCGGCGCCAATGCCGATGTGAGCCCGGCCCGGCCGCCGCACCCCCCTCCCCCTACGGCGACGACGTCACGCGCGCGCGAGATGCCATTGTTGCTTCTGTGAGGGGGGCTCACCGGAACGCGTCGGCATTGACGACGACCCGGACGAACGCGCGGCAGCATGATGCCGCGCGTCCTCATGGCGTCTACGGAGGACACGGCCACGGCCCCTGCCGGTGGGCCGCCGGAGCCCCCGCCGCAGTCGTCGTCGGCCTCGCCGTCGCCTTCCCCTCCTCCTCCTCCACCGACACCGTCCTCGCCTCAGCGGCCTCCCCCGCCGCCGCCGCCGGCCACTCCGCCCCCGCCTCCTCCGGCATCTCCAGGCAAAAACCAGAGTCCCGCGTCGCCGTCCCAAGATTCACCTCCGCCAGTGGCGTCCCCGTCAGTATCCTCACCTCCTCCGGCACCGACGACACCGCCCTCTCCGCCCCCACCAAGCAAGTCCCCTCCACCGCCGTCTCCGCCTCCTACTACGTCGTCGACACCGCCATCGCATCAATCACCTCCGGAAGAAGGAACCTCGCCGCCACCTTCGCCATCATCAGGGGCTACAACACCTTCACCTCCCCCAAATGCGCAGTCGTCGTCGTCGTCTTCCACACCTCCTGCCGGCGCAGGAACCTCGCCACCTGCACCGCGCGAAATGCCATCGCCCGGGACGCCACCATCGCCGCCGACGACGCTTATTACGACACAGGCGCCGCCGATCCAGCCACCACCACCACCGGGCGGTAACAGCATGATCATGCCGAGCTCCCTAACTACAGCCGGCACGTCTCAGAGCCCGCCTGACGCCACCACCGCCGGCGCACCACCACCTCCGGCTCCATCGGTGGGAGCATGGGGCGGCAACGTGCCGAGCGGGTTGCTCATCGGTGTCGCCTTCGCCGGTTTCCTCCTGGCGTTGGCGTCCATGTTCTTGTTCTTGTGCATCAAGAACCGGTGGAAGAGGAGGCGGCGGCCGGCACAGGTGATGAACCTGGCGCGCAGGAGAACCCTCGTCGTGCCGGAGCGTGTGGCGTCGCCGGAAGTGTACCAGCCGTCGAACGGTCCGACGGCGTCGCCGAGCGGGACGAGCTCGTACGAGTTCTCCGGGACGACGTCGTGGTTCACGTACGATGAGCTGGCGGCGGTGACCGGCGGGTTCGCGGAGGAGAAAGTGATCGGCGAGGGCGGGTTCGGGAAGGTGTACATGGGGGCGCTGGGCGACGGGCGGTGCGTGGCGGTGAAGCAGCTCAAGGTGGGGAGCGGGCAGGGGGAGAAGGAGTTCCGCGCCGAGGTGGACACCATCAGCCGCGTCCACCACCGCCACCTCGTCACCCTCGTCGGCTACTCCGTCACCGAGCACCACCACCTCCTCGTCTACGAGTTCGTCTCCAACAAGACGCTCGACCATCACCTGCACGGAGGAGGCCTCCCCGTCATGGATTGGCCCAAGCGGATGAAGATTGCCATCGGATCAGCCCGTGGTTTGACCTACCTGCACGAAGACTGCCATCCTAGGATCATACATAGGGACATCAAGTCGGCCAACATCCTCCTGGATGACGCCTTCGAAGCAAAGGTCGCGGATTTCGGTCTTGCCAAATTCACCAACGATTCGGTGACTCATGTCTCGACGCGCGTGATGGGCACATTCGGGTACCTGGCGCCGGAGTACGCATCAAGCGGGAAGCTGACGGACAGATCGGACGTGTTTTCGTTCGGGGTGGTGCTGTTGGAGCTCATCACCGGGCGGAAGCCCGTGGACTCGTCTCAGCCCCTCGGAGAAGAGAGCTTAGTTGAATGGGCTCGGCCTCTCCTGGTGGACGCGTTGGAGACGGACGACTTCAGGGAGCTCGCTGACCCCGCGCTGGAGCGCCGCTACTCCAAGTCGGAGATGCGGAGGATGGTGGAGGCCGCGGCCGCTTGCATTCGCTACTCCGTCACCAAGAGACCAAGGATGGTGCAGGTGTGGCGATCGCTGGACGTGGAGGGGAGCTCGCCGGACCTGACCAACGGAGTGAAGCTTGGGCAGAGCATGGCGTACGACTCCAACCAGTACTCGGCGGACATCGAGCTCTTCCGGCGGATGGCGTTTGCCAACGACCTCTCCACCGCTGAGCTCGGCTACTCCGGCAAGGACGACGTACGCCGTCCGCCACGCTAGCAGCAGCTCCAGGACCAGGCCCAGCTGAGCACTAACGGCACATGCGCTGTTGTTAAATTTGTTGTCGTAACTAACACGCATGCATGTATGTAAGACGGGGTGGCAGAATTGGTGTATATATAAAAAGGCTTTGAATAGCAATCCTGT]


>consensus_2538#0 ATGCACCACCGGAACGCCTCACAGCCGTAGTCTTCCTTTCCGGTCCCGTGCATGCCCAGG ACGCCATGGGCCACAACCGAGAATAGCATCAACCTTGCCACCGCTGCTGCTTCGCCGGCG CCAATGCCGATGTGAGCCCGGCCCGGCCGCCGCACCCCCCTCCCCCTACGGCGACGACGT CACGCGCGCGCGAGATGCCATTGTTGCTTCTGTGAGGGGGGCTCACCGGAACGCGTCGGC ATTGACGACGACCCGGACGAACGCGCGGCAGCATGATGCCGCGCGTCCTCATGGCGTCTA CGGAGGACACGGCCACGGCCCCTGCCGGTGGGCCGCCGGAGCCCCCGCCGCAGTCGTCGT CGGCCTCGCCGTCGCCTTCCCCTCCTCCTCCTCCACCGACACCGTCCTCGCCTCAGCGGC CTCCCCCGCCGCCGCCGCCGGCCACTCCGCCCCCGCCTCCTCCGGCATCTCCAGGCAAAA ACCAGAGTCCCGCGTCGCCGTCCCAAGATTCACCTCCGCCAGTGGCGTCCCCGTCAGTAT CCTCACCTCCTCCGGCACCGACGACACCGCCCTCTCCGCCCCCACCAAGCAAGTCCCCTC CACCGCCGTCTCCGCCTCCTACTACGTCGTCGACACCGCCATCGCATCAATCACCTCCGG AAGAAGGAACCTCGCCGCCACCTTCGCCATCATCAGGGGCTACAACACCTTCACCTCCCC CAAATGCGCAGTCGTCGTCGTCGTCTTCCACACCTCCTGCCGGCGCAGGAACCTCGCCAC CTGCACCGCGCGAAATGCCATCGCCCGGGACGCCACCATCGCCGCCGACGACGCTTATTA CGACACAGGCGCCGCCGATCCAGCCACCACCACCACCGGGCGGTAACAGCATGATCATGC CGAGCTCCCTAACTACAGCCGGCACGTCTCAGAGCCCGCCTGACGCCACCACCGCCGGCG CACCACCACCTCCGGCTCCATCGGTGGGAGCATGGGGCGGCAACGTGCCGAGCGGGTTGC TCATCGGTGTCGCCTTCGCCGGTTTCCTCCTGGCGTTGGCGTCCATGTTCTTGTTCTTGT GCATCAAGAACCGGTGGAAGAGGAGGCGGCGGCCGGCACAGGTGATGAACCTGGCGCGCA GGAGAACCCTCGTCGTGCCGGAGCGTGTGGCGTCGCCGGAAGTGTACCAGCCGTCGAACG GTCCGACGGCGTCGCCGAGCGGGACGAGCTCGTACGAGTTCTCCGGGACGACGTCGTGGT TCACGTACGATGAGCTGGCGGCGGTGACCGGCGGGTTCGCGGAGGAGAAAGTGATCGGCG AGGGCGGGTTCGGGAAGGTGTACATGGGGGCGCTGGGCGACGGGCGGTGCGTGGCGGTGA AGCAGCTCAAGGTGGGGAGCGGGCAGGGGGAGAAGGAGTTCCGCGCCGAGGTGGACACCA TCAGCCGCGTCCACCACCGCCACCTCGTCACCCTCGTCGGCTACTCCGTCACCGAGCACC ACCACCTCCTCGTCTACGAGTTCGTCTCCAACAAGACGCTCGACCATCACCTGCACGGAG GAGGCCTCCCCGTCATGGATTGGCCCAAGCGGATGAAGATTGCCATCGGATCAGCCCGTG GTTTGACCTACCTGCACGAAGACTGCCATCCTAGGATCATACATAGGGACATCAAGTCGG CCAACATCCTCCTGGATGACGCCTTCGAAGCAAAGGTCGCGGATTTCGGTCTTGCCAAAT TCACCAACGATTCGGTGACTCATGTCTCGACGCGCGTGATGGGCACATTCGGGTACCTGG CGCCGGAGTACGCATCAAGCGGGAAGCTGACGGACAGATCGGACGTGTTTTCGTTCGGGG TGGTGCTGTTGGAGCTCATCACCGGGCGGAAGCCCGTGGACTCGTCTCAGCCCCTCGGAG AAGAGAGCTTAGTTGAATGGGCTCGGCCTCTCCTGGTGGACGCGTTGGAGACGGACGACT TCAGGGAGCTCGCTGACCCCGCGCTGGAGCGCCGCTACTCCAAGTCGGAGATGCGGAGGA TGGTGGAGGCCGCGGCCGCTTGCATTCGCTACTCCGTCACCAAGAGACCAAGGATGGTGC AGGTGTGGCGATCGCTGGACGTGGAGGGGAGCTCGCCGGACCTGACCAACGGAGTGAAGC TTGGGCAGAGCATGGCGTACGACTCCAACCAGTACTCGGCGGACATCGAGCTCTTCCGGC GGATGGCGTTTGCCAACGACCTCTCCACCGCTGAGCTCGGCTACTCCGGCAAGGACGACG TACGCCGTCCGCCACGCTAGCAGCAGCTCCAGGACCAGGCCCAGCTGAGCACTAACGGCA CATGCGCTGTTGTTAAATTTGTTGTCGTAACTAACACGCATGCATGTATGTAAGACGGGG TGGCAGAATTGGTGTATATATAAAAAGGCTTTGAATAGCAATCCTGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)