cluster # 2539

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Oryza sativa
cluster # 2539 cluster # 2539 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2539#0 length = 1669 sequences # 2
consensusID : consensus_2539#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1669
fasta sequence
                              [ACCGATCCACCGATCGGAAACCACGCCCTAACCCCAGCAAACCCCAACGCCCCCCTCCGCCCTGCCACCCTCCGCCGCCGCCGCCTTCGCCGGCGACCACCCCGCCGCCCTCCCCGGGGGGACCCATCTCCTCCGCCGTCCCCTCGCCGCCTGCACCCCGGCGGTGCCTCGGCGTCCTGCTCTGCCGCCTCCTCGCCGTGTGCATAATACATATTCGGAAAGGCAAATATGGCTACAAAACTCCGTCAACCGTCAACTGATGCAGAAAAAACAGAGGTTGGAGAAATAGACACAAGGGCTCCTTTTGAATCCGTCAAAGCTGCAGTAAGCTTATTTGGGGAAGTTCGATTTTCATCTGACAAATCAGCTGCAAGGAAGCCAAAGCCTCCTCAGGCAGAGAGGGTGTTAGCTAAGGAGACAGAACTGCACTTGGCCCAGAAAGAGTTAAATAAATACAAGGATCAGCTCAACAATGCTGAGACAACCAGAGTGCAAGCGTTATCTGAGCTGGAGAAAGCTAAGAAAACTGTTGAGGACCTGACCAATAAGCTGGATGCTATCAACAAGTCCAAAGAGCTGGCTATTCAAGCAACAGAGGATGCAAAAACTCGAACAAAGCAGCTTGAAGGTGGAGACTCGCTTGAGGCTGTTGGAAAAGATGGCCCTTTAAAGCAGGAATTGGATGTTGCAAGGGAACAGTATGTTGTTGCTTTGGCAGATCTTGATGCAGCAAAACAGGAGCTTAGAAAGCTCAAGAAGGATTTTGAAGCTTCATTGGATATGAGGTTGGCTGCAGCACAGCAGGAAGAGGAATCATTGCACTTAGCTGAAACAAACAAGCAAAAGGCTGATCAGCTTCGCAAGGAGATTGCTACAATTCAAGAGTCTCTTACGCATGTGAAGGCAGCCACTGAACAAGCACATGAAGAAGAGGCTCAAATCCTTGCTGAGAAAGATGTTACTAGGAAAACATACAAACAAGCTTTGGAAGAAGCCGAGAAGAAATTATCCTCTTTGAAAAAGGATTTTGATCCTGCTGTTTATAAAAGCCTCAAAGAAAAGCTAGATGAGACCAATTTGGAGATTTCATCTATGCAGAAAAAGATTGAAGATGCTCGAGCTCAAGATTTGGAGTCTATTGCTACTGTCAGCACAGAGTTGGATGATGCTAAGGAAATGTTACAGAAAGTGGCAGAGGAGGAAAGTTCTCTTCGGAGTTTAGTAGAATCACTTAAACAAGAGTTAGAAGCTGTTAAGGAGGAGCATGATCAATTGAAACAGAAGGATACAGAAACTGAATCCATAGTTGGAGACCTACATGTGAAGCTTCAGAAATGCAAATCTGAGCTTGAGGCAGCCGTAGCTGCTGAATCAAAAGCAACGTCAGCTTCTGATGACTTGATGTTGGCCCTCCAACAGTTGTCTTCCGAGTCAAAAAATGCCCTGCAGGAAGCTGAAGTAATGCAAAAGAGTGCTGCAGATTTAAGGGATGAAGCTGAAGCTGCACGAGTAGCATTAGCAGAAGCTGAACAAAAGTTGCAATCTGCTTTAAAAGAAGCAGAAGAGGCAAAATCAGCTGAAGCAAAGGCCCTTGATCAGATCAAGCAACTATCAGAAAGAGCAAGCGCTGCTCGGGCCTCAACATCTGAATCAGGTGCGAAGATAACAA]

[+] EMBL AK070395             [ACCGATCCACCGATCGGAAACCACGCCCTAACCCCAGCAAACCCCAACGCCCCCCTCCGCCCTGCCACCCTCCGCCGCCGCCGCCTTCGCCGGCGACCACCCCGCCGCCCTCCCCGGGGGGACCCATCTCCTCCGCCGTCCCCTCGCCGCCTGCACCCCGGCGGTGCCTCGGCGTCCTGCTCTGCCGCCTCCTCGCCGTGTGCATAATACATATTCGGAAAGGCAAATATGGCTACAAAACTCCGTCAACCGTCAACTGATGCAGAAAAAACAGAGGTTGGAGAAATAGACACAAGGGCTCCTTTTGAATCCGTCAAAGCTGCAGTAAGCTTATTTGGGGAAGTTCGATTTTCATCTGACAAATCAGCTGCAAGGAAGCCAAAGCCTCCTCAGGCAGAGAGGGTGTTAGCTAAGGAGACAGAACTGCACTTGGCCCAGAAAGAGTTAAATAAATACAAGGATCAGCTCAACAATGCTGAGACAACCAGAGTGCAAGCGTTATCTGAGCTGGAGAAAGCTAAGAAAACTGTTGAGGACCTGACCAATAAGCTGGATGCTATCAACAAGTCCAAAGAGCTGGCTATTCAAGCAACAGAGGATGCAAAAACTCGAACAAAGCAGCTTGAAGGTGGAGACTCGCTTGAGGCTGTTGGAAAAGATGGCCCTTTAAAGCAGGAATTGGATGTTGCAAGGGAACAGTATGTTGTTGCTTTGGCAGATCTTGATGCAGCAAAACAGGAGCTTAGAAAGCTCAAGAAGGATTTTGAAGCTTCATTGGATATGAGGTTGGCTGCAGCACAGCAGGAAGAGGAATCATTGCACTTAGCTGAAACAAACAAGCAAAAGGCTGATCAGCTTCGCAAGGAGATTGCTACAATTCAAGAGTCTCTTACGCATGTGAAGGCAGCCACTGAACAAGCACATGAAGAAGAGGCTCAAATCCTTGCTGAGAAAGATGTTACTAGGAAAACATACAAACAAGCTTTGGAAGAAGCCGAGAAGAAATTATCCTCTTTGAAAAAGGATTTTGATCCTGCTGTTTATAAAAGCCTCAAAGAAAAGCTAGATGAGACCAATTTGGAGATTTCATCTATGCAGAAAAAGATTGAAGATGCTCGAGCTCAAGATTTGGAGTCTATTGCTACTGTCAGCACAGAGTTGGATGATGCTAAGGAAATGTTACAGAAAGTGGCAGAGGAGGAAAGTTCTCTTCGGAGTTTAGTAGAATCACTTAAACAAGAGTTAGAAGCTGTTAAGGAGGAGCATGATCAATTGAAACAGAAGGATACAGAAACTGAATCCATAGTTGGAGACCTACATGTGAAGCTTCAGAAATGCAAATCTGAGCTTGAGGCAGCCGTAGCTGCTGAATCAAAAGCAACGTCAGCTTCTGATGACTTGATGTTGGCCCTCCAACAGTTGTCTTCCGAGTCAAAAAATGCCCTGCAGGAAGCTGAAGTAATGCAAAAGAGTGCTGCAGATTTAAGGGATGAAGCTGAAGCTGCACGAGTAGCATTAGCAGAAGCTGAACAAAAGTTGCAATCTGCTTTAAAAGAAGCAGAAGAGGCAAAATCAGCTGAAGCAAAGGCCCTTGATCAGATCAAGCAACTATCAGAAAGAGCAAGCGCTGCTCGGGCCTCAACATCTGAATCAGGTGCGAAGATAACAA]
[+] EMBL AK102333             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCACAGCAGGAAGAGGAATCATTGCACTTAGCTGAAACAAACAAGCAAAAGGCTGATCAGCTTCGCAAGGAGATTGCTACAATTCAAGAGTCTCTTACGCATGTGAAGGCAGCCACTGAACAAGCACATGAAGAAGAGGCTCAAATCCTTGCTGAGAAAGATGTTACTAGGAAAACATACAAACAAGCTTTGGAAGAAGCCGAGAAGAAATTATCCTCTTTGAAAAAGGATTTTGATCCTGCTGTTTATAAAAGCCTCAAAGAAAAGCTAGATGAGACCAATTTGGAGATTTCATCTATGCAGAAAAAGATTGAAGATGCTCGAGCTCAAGATTTGGAGTCTATTGCTACTGTCAGCACAGAGTTGGATGATGCTAAGGAAATGTTACAGAAAGTGGCAGAGGAGGAAAGTTCTCTTCGGAGTTTAGTAGAATCACTTAAACAAGAGTTAGAAGCTGTTAAGGAGGAGTATGATCAATTGAAACAGAAGGATACAGAAACTGAATCCATAGTTGGAGACCTACATGTGAAGCTTCAGAAATGCAAATCTGAGCTTGAGGCAGCCGTAGCTGCTGAATCAAAAGCAACGTCAGCTTCTGATGACTTGATGTTGGCCCTCCAACAGTTGTCTTCCGAGTCAAAAAATGCCCTGCAGGAAGCTGAAGTAATGCAAAAGAGTGCTGCAGATTTAAGGGATGAAGCTGAAGCTGCACGAGTAGCATTAGCAGAAGCTGAACAAAAGTTGCAATCTGCTTTAAAAGAAGCAGAAGAGGCAAAATCAGCTGAAGCAAAGGCCCTTGATCAGATCAAGCAACTATCAGAAAGAGCAAGCGCTGCTCGGGCCTCAACATCTGAATCAGGTGCGAAGATAACAA]




>consensus_2539#0
ACCGATCCACCGATCGGAAACCACGCCCTAACCCCAGCAAACCCCAACGCCCCCCTCCGC
CCTGCCACCCTCCGCCGCCGCCGCCTTCGCCGGCGACCACCCCGCCGCCCTCCCCGGGGG
GACCCATCTCCTCCGCCGTCCCCTCGCCGCCTGCACCCCGGCGGTGCCTCGGCGTCCTGC
TCTGCCGCCTCCTCGCCGTGTGCATAATACATATTCGGAAAGGCAAATATGGCTACAAAA
CTCCGTCAACCGTCAACTGATGCAGAAAAAACAGAGGTTGGAGAAATAGACACAAGGGCT
CCTTTTGAATCCGTCAAAGCTGCAGTAAGCTTATTTGGGGAAGTTCGATTTTCATCTGAC
AAATCAGCTGCAAGGAAGCCAAAGCCTCCTCAGGCAGAGAGGGTGTTAGCTAAGGAGACA
GAACTGCACTTGGCCCAGAAAGAGTTAAATAAATACAAGGATCAGCTCAACAATGCTGAG
ACAACCAGAGTGCAAGCGTTATCTGAGCTGGAGAAAGCTAAGAAAACTGTTGAGGACCTG
ACCAATAAGCTGGATGCTATCAACAAGTCCAAAGAGCTGGCTATTCAAGCAACAGAGGAT
GCAAAAACTCGAACAAAGCAGCTTGAAGGTGGAGACTCGCTTGAGGCTGTTGGAAAAGAT
GGCCCTTTAAAGCAGGAATTGGATGTTGCAAGGGAACAGTATGTTGTTGCTTTGGCAGAT
CTTGATGCAGCAAAACAGGAGCTTAGAAAGCTCAAGAAGGATTTTGAAGCTTCATTGGAT
ATGAGGTTGGCTGCAGCACAGCAGGAAGAGGAATCATTGCACTTAGCTGAAACAAACAAG
CAAAAGGCTGATCAGCTTCGCAAGGAGATTGCTACAATTCAAGAGTCTCTTACGCATGTG
AAGGCAGCCACTGAACAAGCACATGAAGAAGAGGCTCAAATCCTTGCTGAGAAAGATGTT
ACTAGGAAAACATACAAACAAGCTTTGGAAGAAGCCGAGAAGAAATTATCCTCTTTGAAA
AAGGATTTTGATCCTGCTGTTTATAAAAGCCTCAAAGAAAAGCTAGATGAGACCAATTTG
GAGATTTCATCTATGCAGAAAAAGATTGAAGATGCTCGAGCTCAAGATTTGGAGTCTATT
GCTACTGTCAGCACAGAGTTGGATGATGCTAAGGAAATGTTACAGAAAGTGGCAGAGGAG
GAAAGTTCTCTTCGGAGTTTAGTAGAATCACTTAAACAAGAGTTAGAAGCTGTTAAGGAG
GAGCATGATCAATTGAAACAGAAGGATACAGAAACTGAATCCATAGTTGGAGACCTACAT
GTGAAGCTTCAGAAATGCAAATCTGAGCTTGAGGCAGCCGTAGCTGCTGAATCAAAAGCA
ACGTCAGCTTCTGATGACTTGATGTTGGCCCTCCAACAGTTGTCTTCCGAGTCAAAAAAT
GCCCTGCAGGAAGCTGAAGTAATGCAAAAGAGTGCTGCAGATTTAAGGGATGAAGCTGAA
GCTGCACGAGTAGCATTAGCAGAAGCTGAACAAAAGTTGCAATCTGCTTTAAAAGAAGCA
GAAGAGGCAAAATCAGCTGAAGCAAAGGCCCTTGATCAGATCAAGCAACTATCAGAAAGA
GCAAGCGCTGCTCGGGCCTCAACATCTGAATCAGGTGCGAAGATAACAA
clustalw multiple alignements is not computed in this case