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Oryza sativa
cluster # 2548 cluster # 2548       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2548#0 length = 2933 sequences # 1  
 consensus_2548#1 length = 1264 sequences # 1  
consensusID : consensus_2548#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2933
fasta sequence 
                              [CTCCCTAGCTGCGGACGGACTTGGATCCATCCATCTCCCATTCATTCATTCATTCATTCATGTGGCCATCCATCCACCATCTTGCATGCTAGCTAGCTACCCTGCAGGCCCATAACGACATTATTCAATTCGAATTAATTCCATCATCATATAATAATATATATGATGCTGAGCTCGTCGGCGTCGAGGCGGGAGGTCGGCGGCGGCGGCGCCGCCTCCAGCACCAAGAGCGGCGAGCTGTCCCTGTCCAAGGTGGCCAGCGTGGCCATACGGGAGTCGTCGGGCTCGGGCTCGGGCGGGATTTCCAAGAGCAGCGAATTGCTGTCGAGGGCAGGAACCATGGCGGCGGCGAGGGAGGCGGCGGCGGCGGCGGTACACCACGAAGGATGGATGGTGCGCTACGGCCGGAGGAAGATCGGCAGGTCCTTCTTCCACACCCGCTACTTCGTCCTCGACAGCAGGCTCCTCGCCTACTACAAGAAGAAACCCAAAGACAACATGGTGCCACTAAAATCGCTGCTGATAGACGGGAATTGCAGGGTGGAGGATAGAGGACTCAAAACACATCATGGACAAATGGTCTATGTCCTGTGCGTTTATAATAAGAAAGAAAAGGAGCATCAGATCACGATGGGCGCGTATGATATTGAGGATGCTCTGGCCTGGAAAAAGAATATAGAACTCATTATCGGTCAGCAAGAAAATATGACCTCCAAAAACCGCAAGGCCTTTGCTTCAATGGACTTTGATACGGAACTAGGAGGGCAGTTTATATTCTCAGACCATGACAGCGCAGCTAAAGATGAAGAGGAACGACCTATGTTGATTCGCAGGACAACTATAGGGAATGGTCCCCCTGAATCAATACATGACTGGACCAAAGAGCATGATATCGGTCCACCCAATCAGATTGACCCCATTCAAGTTAGCTCCAAGAAGAATTGGCGCCTACTTAGATGCCAAAATGGACTACGCATCTTTGAAGAACTTCTGGAATTCGATTATCTTGCAAGAAGCTGTAGCAGAGCTATGCGAGCTGTTGGTGTTGTGGAAGCCACATGCGAAGCCATTTTTGGGCTGGTGATGAGCATGGATGTAACAAGATATGAGTGGGACTGCAGCTTTCGCTATGGTAGTTTAGTTGAAGAGGTTGACGGCCACACCGCTATACTGTATCATAAGTTGCAGTTGCACTGGTGCCCAATGTTAGTATGGCCTCGAGACCTATGTTATGTTCGCTATTGGCGGCGTAATGACGATGGAAGTTACGTTGTGCTGTTTCGATCTACAGAGCATCCAAACTGTGGACGTCAAAAAGGATATGTGAGGGCTTTATTTGAAAGTGGAGGTTTCAAGATTTCTCCTCTCAAGTGTCGCAACGGAAGACCCCGCACTCAAGTTCAACACCTAATGCAGATTGATCTCAGGGGATGGCTCCTCAACTACTCTCCTTCCTTTCAGTATCATTCTTTGCTGCAGATACAAAACTGTGTAGCCGGCCTACGAGAATACTTCTCCCAAACAGACGAAACACATATAACTCCAAGGATTCCTGTGATGGAAAACATGGTTGACACATCTGCAGTACAGAAAGATGACAAGAAGAGTACCGAAGAAGTAGACTCCAAGACTAAAACACCAGATCGAGGACAAGCGGACAGTAAAAACATGGGAATCATTGATGAAGAAACAGACGAGGATGAGGACTATCAGGTTCCTGAAGCTAACATAGAGGAAGATCCTAACAAAGATGCTAAGCGTGCAGACGAACCACCAGAAAAGATTGATCTATCATGCTTTTCGGGCATTCTTCGTTGCGATGCGGATGAGAAAAGCCGAAACTGTTGGACAGTACCTGACAGCAAGCTGTTTAAAGTCCGTAGCAAGAACTTCCCGCATGATAAATCAAAGATACCTGCAGCGAGTTACCTGATGGAGCTTGCGGCCATTGACTGGTTTAAGGACAGCAAGCGTATGGATAACGTAGGCAGGCAGAAAGGCTGTGTAGCCCAGGTAGCTGCTGAGAAAGGGATGCATACATTTGTTGCCAACATACAGATCCCTGGATCAACTCATTACAGCTTGGTGATGTACTTCGTGACAAAGTCGCTGAAGAAGGGATCACTGCTGCAGCGATTCTTCGATGGGGATGATGAGTTCCGCAATAGCAGGCTGAAGCTGATACCCTCTGTACCCAAGGGATCATGGATAGTGCGGCAGAGTGTAGGGAGCACGCCGTGCTTGCTGGGGAAGGCGGTGGATTGCAGCTACGTGCGTGGAGCCGGATACCTGGAGGTGGACGTCGACATTGGGTCGTCGGCGGTGGCCAACGGGGTGCTGGGTTTGGTGTTTGGTGTGGTGACGACGCTGGTGGTGGACATGGCGTTCCTAATACAGGCCAACACCTACGAGGAGCTCCCGAGCAGGTCATCGGCGCCGCCCGTCTCGCTCACGTCGAACCCGCCGCCGCTATCGTCCCCCAGGACCTTACTCCCCCTCCTCCTGCCCTTGCCGACGACGACAACGCCGCTGCTTCTTCCTCCGAGGATGATCATTTTTCCAAGAAAACCAACTAAGCTAGCACCTCTCTCAACGCACGCACTGCAACTTATCAATCATTTATCTTCTTGTAATTTCTAATTATTTCCGAGGCTCATAGCAAGCTTTGTTTTTTTTCTTTTCATCTTTTTTTTTATCTCGTTAAGTTGTTTGCAAAGTACAGCTGGTTTTCTTCTACGTAGGAACAAAGATAAATCTAGCTAGTGACAGTATTTCGTTGGAACCTAATATTATAGACTGAGATATTTTGTTTAGGCTTAGATTTGCTGTCTTTGGCTTTAAGTCAGACTTTTAATTAACTTACACTCCCTCCATTTTTTTAATTGACGACGCCATTGACTTTTGAACACATGTTTGACCATTCGCTTTATTTA]

[+] EMBL AK070607             [CTCCCTAGCTGCGGACGGACTTGGATCCATCCATCTCCCATTCATTCATTCATTCATTCATGTGGCCATCCATCCACCATCTTGCATGCTAGCTAGCTACCCTGCAGGCCCATAACGACATTATTCAATTCGAATTAATTCCATCATCATATAATAATATATATGATGCTGAGCTCGTCGGCGTCGAGGCGGGAGGTCGGCGGCGGCGGCGCCGCCTCCAGCACCAAGAGCGGCGAGCTGTCCCTGTCCAAGGTGGCCAGCGTGGCCATACGGGAGTCGTCGGGCTCGGGCTCGGGCGGGATTTCCAAGAGCAGCGAATTGCTGTCGAGGGCAGGAACCATGGCGGCGGCGAGGGAGGCGGCGGCGGCGGCGGTACACCACGAAGGATGGATGGTGCGCTACGGCCGGAGGAAGATCGGCAGGTCCTTCTTCCACACCCGCTACTTCGTCCTCGACAGCAGGCTCCTCGCCTACTACAAGAAGAAACCCAAAGACAACATGGTGCCACTAAAATCGCTGCTGATAGACGGGAATTGCAGGGTGGAGGATAGAGGACTCAAAACACATCATGGACAAATGGTCTATGTCCTGTGCGTTTATAATAAGAAAGAAAAGGAGCATCAGATCACGATGGGCGCGTATGATATTGAGGATGCTCTGGCCTGGAAAAAGAATATAGAACTCATTATCGGTCAGCAAGAAAATATGACCTCCAAAAACCGCAAGGCCTTTGCTTCAATGGACTTTGATACGGAACTAGGAGGGCAGTTTATATTCTCAGACCATGACAGCGCAGCTAAAGATGAAGAGGAACGACCTATGTTGATTCGCAGGACAACTATAGGGAATGGTCCCCCTGAATCAATACATGACTGGACCAAAGAGCATGATATCGGTCCACCCAATCAGATTGACCCCATTCAAGTTAGCTCCAAGAAGAATTGGCGCCTACTTAGATGCCAAAATGGACTACGCATCTTTGAAGAACTTCTGGAATTCGATTATCTTGCAAGAAGCTGTAGCAGAGCTATGCGAGCTGTTGGTGTTGTGGAAGCCACATGCGAAGCCATTTTTGGGCTGGTGATGAGCATGGATGTAACAAGATATGAGTGGGACTGCAGCTTTCGCTATGGTAGTTTAGTTGAAGAGGTTGACGGCCACACCGCTATACTGTATCATAAGTTGCAGTTGCACTGGTGCCCAATGTTAGTATGGCCTCGAGACCTATGTTATGTTCGCTATTGGCGGCGTAATGACGATGGAAGTTACGTTGTGCTGTTTCGATCTACAGAGCATCCAAACTGTGGACGTCAAAAAGGATATGTGAGGGCTTTATTTGAAAGTGGAGGTTTCAAGATTTCTCCTCTCAAGTGTCGCAACGGAAGACCCCGCACTCAAGTTCAACACCTAATGCAGATTGATCTCAGGGGATGGCTCCTCAACTACTCTCCTTCCTTTCAGTATCATTCTTTGCTGCAGATACAAAACTGTGTAGCCGGCCTACGAGAATACTTCTCCCAAACAGACGAAACACATATAACTCCAAGGATTCCTGTGATGGAAAACATGGTTGACACATCTGCAGTACAGAAAGATGACAAGAAGAGTACCGAAGAAGTAGACTCCAAGACTAAAACACCAGATCGAGGACAAGCGGACAGTAAAAACATGGGAATCATTGATGAAGAAACAGACGAGGATGAGGACTATCAGGTTCCTGAAGCTAACATAGAGGAAGATCCTAACAAAGATGCTAAGCGTGCAGACGAACCACCAGAAAAGATTGATCTATCATGCTTTTCGGGCATTCTTCGTTGCGATGCGGATGAGAAAAGCCGAAACTGTTGGACAGTACCTGACAGCAAGCTGTTTAAAGTCCGTAGCAAGAACTTCCCGCATGATAAATCAAAGATACCTGCAGCGAGTTACCTGATGGAGCTTGCGGCCATTGACTGGTTTAAGGACAGCAAGCGTATGGATAACGTAGGCAGGCAGAAAGGCTGTGTAGCCCAGGTAGCTGCTGAGAAAGGGATGCATACATTTGTTGCCAACATACAGATCCCTGGATCAACTCATTACAGCTTGGTGATGTACTTCGTGACAAAGTCGCTGAAGAAGGGATCACTGCTGCAGCGATTCTTCGATGGGGATGATGAGTTCCGCAATAGCAGGCTGAAGCTGATACCCTCTGTACCCAAGGGATCATGGATAGTGCGGCAGAGTGTAGGGAGCACGCCGTGCTTGCTGGGGAAGGCGGTGGATTGCAGCTACGTGCGTGGAGCCGGATACCTGGAGGTGGACGTCGACATTGGGTCGTCGGCGGTGGCCAACGGGGTGCTGGGTTTGGTGTTTGGTGTGGTGACGACGCTGGTGGTGGACATGGCGTTCCTAATACAGGCCAACACCTACGAGGAGCTCCCGAGCAGGTCATCGGCGCCGCCCGTCTCGCTCACGTCGAACCCGCCGCCGCTATCGTCCCCCAGGACCTTACTCCCCCTCCTCCTGCCCTTGCCGACGACGACAACGCCGCTGCTTCTTCCTCCGAGGATGATCATTTTTCCAAGAAAACCAACTAAGCTAGCACCTCTCTCAACGCACGCACTGCAACTTATCAATCATTTATCTTCTTGTAATTTCTAATTATTTCCGAGGCTCATAGCAAGCTTTGTTTTTTTTCTTTTCATCTTTTTTTTTATCTCGTTAAGTTGTTTGCAAAGTACAGCTGGTTTTCTTCTACGTAGGAACAAAGATAAATCTAGCTAGTGACAGTATTTCGTTGGAACCTAATATTATAGACTGAGATATTTTGTTTAGGCTTAGATTTGCTGTCTTTGGCTTTAAGTCAGACTTTTAATTAACTTACACTCCCTCCATTTTTTTAATTGACGACGCCATTGACTTTTGAACACATGTTTGACCATTCGCTTTATTTA]




>consensus_2548#0
CTCCCTAGCTGCGGACGGACTTGGATCCATCCATCTCCCATTCATTCATTCATTCATTCA
TGTGGCCATCCATCCACCATCTTGCATGCTAGCTAGCTACCCTGCAGGCCCATAACGACA
TTATTCAATTCGAATTAATTCCATCATCATATAATAATATATATGATGCTGAGCTCGTCG
GCGTCGAGGCGGGAGGTCGGCGGCGGCGGCGCCGCCTCCAGCACCAAGAGCGGCGAGCTG
TCCCTGTCCAAGGTGGCCAGCGTGGCCATACGGGAGTCGTCGGGCTCGGGCTCGGGCGGG
ATTTCCAAGAGCAGCGAATTGCTGTCGAGGGCAGGAACCATGGCGGCGGCGAGGGAGGCG
GCGGCGGCGGCGGTACACCACGAAGGATGGATGGTGCGCTACGGCCGGAGGAAGATCGGC
AGGTCCTTCTTCCACACCCGCTACTTCGTCCTCGACAGCAGGCTCCTCGCCTACTACAAG
AAGAAACCCAAAGACAACATGGTGCCACTAAAATCGCTGCTGATAGACGGGAATTGCAGG
GTGGAGGATAGAGGACTCAAAACACATCATGGACAAATGGTCTATGTCCTGTGCGTTTAT
AATAAGAAAGAAAAGGAGCATCAGATCACGATGGGCGCGTATGATATTGAGGATGCTCTG
GCCTGGAAAAAGAATATAGAACTCATTATCGGTCAGCAAGAAAATATGACCTCCAAAAAC
CGCAAGGCCTTTGCTTCAATGGACTTTGATACGGAACTAGGAGGGCAGTTTATATTCTCA
GACCATGACAGCGCAGCTAAAGATGAAGAGGAACGACCTATGTTGATTCGCAGGACAACT
ATAGGGAATGGTCCCCCTGAATCAATACATGACTGGACCAAAGAGCATGATATCGGTCCA
CCCAATCAGATTGACCCCATTCAAGTTAGCTCCAAGAAGAATTGGCGCCTACTTAGATGC
CAAAATGGACTACGCATCTTTGAAGAACTTCTGGAATTCGATTATCTTGCAAGAAGCTGT
AGCAGAGCTATGCGAGCTGTTGGTGTTGTGGAAGCCACATGCGAAGCCATTTTTGGGCTG
GTGATGAGCATGGATGTAACAAGATATGAGTGGGACTGCAGCTTTCGCTATGGTAGTTTA
GTTGAAGAGGTTGACGGCCACACCGCTATACTGTATCATAAGTTGCAGTTGCACTGGTGC
CCAATGTTAGTATGGCCTCGAGACCTATGTTATGTTCGCTATTGGCGGCGTAATGACGAT
GGAAGTTACGTTGTGCTGTTTCGATCTACAGAGCATCCAAACTGTGGACGTCAAAAAGGA
TATGTGAGGGCTTTATTTGAAAGTGGAGGTTTCAAGATTTCTCCTCTCAAGTGTCGCAAC
GGAAGACCCCGCACTCAAGTTCAACACCTAATGCAGATTGATCTCAGGGGATGGCTCCTC
AACTACTCTCCTTCCTTTCAGTATCATTCTTTGCTGCAGATACAAAACTGTGTAGCCGGC
CTACGAGAATACTTCTCCCAAACAGACGAAACACATATAACTCCAAGGATTCCTGTGATG
GAAAACATGGTTGACACATCTGCAGTACAGAAAGATGACAAGAAGAGTACCGAAGAAGTA
GACTCCAAGACTAAAACACCAGATCGAGGACAAGCGGACAGTAAAAACATGGGAATCATT
GATGAAGAAACAGACGAGGATGAGGACTATCAGGTTCCTGAAGCTAACATAGAGGAAGAT
CCTAACAAAGATGCTAAGCGTGCAGACGAACCACCAGAAAAGATTGATCTATCATGCTTT
TCGGGCATTCTTCGTTGCGATGCGGATGAGAAAAGCCGAAACTGTTGGACAGTACCTGAC
AGCAAGCTGTTTAAAGTCCGTAGCAAGAACTTCCCGCATGATAAATCAAAGATACCTGCA
GCGAGTTACCTGATGGAGCTTGCGGCCATTGACTGGTTTAAGGACAGCAAGCGTATGGAT
AACGTAGGCAGGCAGAAAGGCTGTGTAGCCCAGGTAGCTGCTGAGAAAGGGATGCATACA
TTTGTTGCCAACATACAGATCCCTGGATCAACTCATTACAGCTTGGTGATGTACTTCGTG
ACAAAGTCGCTGAAGAAGGGATCACTGCTGCAGCGATTCTTCGATGGGGATGATGAGTTC
CGCAATAGCAGGCTGAAGCTGATACCCTCTGTACCCAAGGGATCATGGATAGTGCGGCAG
AGTGTAGGGAGCACGCCGTGCTTGCTGGGGAAGGCGGTGGATTGCAGCTACGTGCGTGGA
GCCGGATACCTGGAGGTGGACGTCGACATTGGGTCGTCGGCGGTGGCCAACGGGGTGCTG
GGTTTGGTGTTTGGTGTGGTGACGACGCTGGTGGTGGACATGGCGTTCCTAATACAGGCC
AACACCTACGAGGAGCTCCCGAGCAGGTCATCGGCGCCGCCCGTCTCGCTCACGTCGAAC
CCGCCGCCGCTATCGTCCCCCAGGACCTTACTCCCCCTCCTCCTGCCCTTGCCGACGACG
ACAACGCCGCTGCTTCTTCCTCCGAGGATGATCATTTTTCCAAGAAAACCAACTAAGCTA
GCACCTCTCTCAACGCACGCACTGCAACTTATCAATCATTTATCTTCTTGTAATTTCTAA
TTATTTCCGAGGCTCATAGCAAGCTTTGTTTTTTTTCTTTTCATCTTTTTTTTTATCTCG
TTAAGTTGTTTGCAAAGTACAGCTGGTTTTCTTCTACGTAGGAACAAAGATAAATCTAGC
TAGTGACAGTATTTCGTTGGAACCTAATATTATAGACTGAGATATTTTGTTTAGGCTTAG
ATTTGCTGTCTTTGGCTTTAAGTCAGACTTTTAATTAACTTACACTCCCTCCATTTTTTT
AATTGACGACGCCATTGACTTTTGAACACATGTTTGACCATTCGCTTTATTTA

consensusID : consensus_2548#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1264
fasta sequence 
                              [ATGACGATGGAAGTTACGTTGTGCTGTTTCGATCTACAGAGCATCCAAACTGTGGACGTCAAAAAGGATATGTGAGGGCTTTTATTGAAAGTGGAGGTTTCAAGATTTCTCCTCTCAAGTGTCGCAACGGAAGACCCCGCACTCAAGTTCAACACCTAATGCAGATTGATCTCAGGGGATGGCTCCTCAACTACTCTCCTTCCTTTCAGTATCATTCTTTGCTGCAGATACAAAACTGTGTAGCCGGCCTACGAGAATACTTCTCCCAAACAGACGAAACACATATAACTCCAAGGATTCCTGTGATGGAAAACATGGTTGACACATCTGCAGTACAGAAAGATGACAAGAAGAGTACCGAAGAAGTAGACTCCAAGACTAAAACACCAGATCGAGGACAAGCGGACAGTAAAAACATGGGAATCATTGATGAAGAAACAGACGAGGATGAGGACTATCAGGTTCCTGAAGCTAACATAGAGGAAGATCCTAACAAAGATGCTAAGCGTGCAGACGAACCACCAGAAAAGATTGATCTATCATGCTTTTCGGGCATTCTTCGTTGCGATGCGGATGAGAAAAGCCGAAACTGTTGGACAGTACCTGACAGCAAGCTGTTTAAAGTCCGTAGCAAGAACTTCCCGCATGATAAATCAAAGATACCTGCAGCGAGTTACCTGATGGAGCTTGCGGCCATTGACTGGTTTAAGGACAGCAAGCGTATGGATAACGTAGGCAGGCAGAAAGGCTGTGTAGCCCAGGTAGCTGCTGAGAAAGGGATGCATACATTTGTTGCCAACATACAGATCCCTGGATCAACTCATTACAGCTTGGTGATGTACTTCGTGACAAAGTCGCTGAAGAAGGGATCACTGCTGCAGCGATTCTTCGATGGGGATGATGAGTTCCGCAATAGCAGGCTGAAGCTGATACCCTCTGTACCCAAGGGATCATGGATAGTGCGGCAGAGTGTAGGGAGCACGCCGTGCTTCTTCCTACGAGGATGATCATTTGTCCAAGAAAACCAACTAAGCTAGCACCTCTCTCAACGCACGCACTGCAACTTATCAATCATTTATCTTCTTGTAATTTCTAATTATTTCCGAGGCTCATAGCAAGCTTTGTTTTTTTTCTTTTCATCTTTTTTTTTATCTCGTTAAGTTGTTTGCAAAGTACAGCTGGTTTTCTTCTACGTAGGAACAAAGATAAATCTAGCTAGTGACAGTATTTCGTTGGAACCTAATATTATAGACTGAGATATTTT]

[+] EMBL AK070993             [ATGACGATGGAAGTTACGTTGTGCTGTTTCGATCTACAGAGCATCCAAACTGTGGACGTCAAAAAGGATATGTGAGGGCTTTTATTGAAAGTGGAGGTTTCAAGATTTCTCCTCTCAAGTGTCGCAACGGAAGACCCCGCACTCAAGTTCAACACCTAATGCAGATTGATCTCAGGGGATGGCTCCTCAACTACTCTCCTTCCTTTCAGTATCATTCTTTGCTGCAGATACAAAACTGTGTAGCCGGCCTACGAGAATACTTCTCCCAAACAGACGAAACACATATAACTCCAAGGATTCCTGTGATGGAAAACATGGTTGACACATCTGCAGTACAGAAAGATGACAAGAAGAGTACCGAAGAAGTAGACTCCAAGACTAAAACACCAGATCGAGGACAAGCGGACAGTAAAAACATGGGAATCATTGATGAAGAAACAGACGAGGATGAGGACTATCAGGTTCCTGAAGCTAACATAGAGGAAGATCCTAACAAAGATGCTAAGCGTGCAGACGAACCACCAGAAAAGATTGATCTATCATGCTTTTCGGGCATTCTTCGTTGCGATGCGGATGAGAAAAGCCGAAACTGTTGGACAGTACCTGACAGCAAGCTGTTTAAAGTCCGTAGCAAGAACTTCCCGCATGATAAATCAAAGATACCTGCAGCGAGTTACCTGATGGAGCTTGCGGCCATTGACTGGTTTAAGGACAGCAAGCGTATGGATAACGTAGGCAGGCAGAAAGGCTGTGTAGCCCAGGTAGCTGCTGAGAAAGGGATGCATACATTTGTTGCCAACATACAGATCCCTGGATCAACTCATTACAGCTTGGTGATGTACTTCGTGACAAAGTCGCTGAAGAAGGGATCACTGCTGCAGCGATTCTTCGATGGGGATGATGAGTTCCGCAATAGCAGGCTGAAGCTGATACCCTCTGTACCCAAGGGATCATGGATAGTGCGGCAGAGTGTAGGGAGCACGCCGTGCTTCTTCCTACGAGGATGATCATTTGTCCAAGAAAACCAACTAAGCTAGCACCTCTCTCAACGCACGCACTGCAACTTATCAATCATTTATCTTCTTGTAATTTCTAATTATTTCCGAGGCTCATAGCAAGCTTTGTTTTTTTTCTTTTCATCTTTTTTTTTATCTCGTTAAGTTGTTTGCAAAGTACAGCTGGTTTTCTTCTACGTAGGAACAAAGATAAATCTAGCTAGTGACAGTATTTCGTTGGAACCTAATATTATAGACTGAGATATTTT]




>consensus_2548#1
ATGACGATGGAAGTTACGTTGTGCTGTTTCGATCTACAGAGCATCCAAACTGTGGACGTC
AAAAAGGATATGTGAGGGCTTTTATTGAAAGTGGAGGTTTCAAGATTTCTCCTCTCAAGT
GTCGCAACGGAAGACCCCGCACTCAAGTTCAACACCTAATGCAGATTGATCTCAGGGGAT
GGCTCCTCAACTACTCTCCTTCCTTTCAGTATCATTCTTTGCTGCAGATACAAAACTGTG
TAGCCGGCCTACGAGAATACTTCTCCCAAACAGACGAAACACATATAACTCCAAGGATTC
CTGTGATGGAAAACATGGTTGACACATCTGCAGTACAGAAAGATGACAAGAAGAGTACCG
AAGAAGTAGACTCCAAGACTAAAACACCAGATCGAGGACAAGCGGACAGTAAAAACATGG
GAATCATTGATGAAGAAACAGACGAGGATGAGGACTATCAGGTTCCTGAAGCTAACATAG
AGGAAGATCCTAACAAAGATGCTAAGCGTGCAGACGAACCACCAGAAAAGATTGATCTAT
CATGCTTTTCGGGCATTCTTCGTTGCGATGCGGATGAGAAAAGCCGAAACTGTTGGACAG
TACCTGACAGCAAGCTGTTTAAAGTCCGTAGCAAGAACTTCCCGCATGATAAATCAAAGA
TACCTGCAGCGAGTTACCTGATGGAGCTTGCGGCCATTGACTGGTTTAAGGACAGCAAGC
GTATGGATAACGTAGGCAGGCAGAAAGGCTGTGTAGCCCAGGTAGCTGCTGAGAAAGGGA
TGCATACATTTGTTGCCAACATACAGATCCCTGGATCAACTCATTACAGCTTGGTGATGT
ACTTCGTGACAAAGTCGCTGAAGAAGGGATCACTGCTGCAGCGATTCTTCGATGGGGATG
ATGAGTTCCGCAATAGCAGGCTGAAGCTGATACCCTCTGTACCCAAGGGATCATGGATAG
TGCGGCAGAGTGTAGGGAGCACGCCGTGCTTCTTCCTACGAGGATGATCATTTGTCCAAG
AAAACCAACTAAGCTAGCACCTCTCTCAACGCACGCACTGCAACTTATCAATCATTTATC
TTCTTGTAATTTCTAATTATTTCCGAGGCTCATAGCAAGCTTTGTTTTTTTTCTTTTCAT
CTTTTTTTTTATCTCGTTAAGTTGTTTGCAAAGTACAGCTGGTTTTCTTCTACGTAGGAA
CAAAGATAAATCTAGCTAGTGACAGTATTTCGTTGGAACCTAATATTATAGACTGAGATA
TTTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2548#0      CTCCCTAGCTGCGGACGGACTTGGATCCATCCATCTCCCATTCATTCATTCATTCATTCA 60
consensus_2548#1      ------------------------------------------------------------
                                                                                  

consensus_2548#0      TGTGGCCATCCATCCACCATCTTGCATGCTAGCTAGCTACCCTGCAGGCCCATAACGACA 120
consensus_2548#1      ------------------------------------------------------------
                                                                                  

consensus_2548#0      TTATTCAATTCGAATTAATTCCATCATCATATAATAATATATATGATGCTGAGCTCGTCG 180
consensus_2548#1      ------------------------------------------------------------
                                                                                  

consensus_2548#0      GCGTCGAGGCGGGAGGTCGGCGGCGGCGGCGCCGCCTCCAGCACCAAGAGCGGCGAGCTG 240
consensus_2548#1      ------------------------------------------------------------
                                                                                  

consensus_2548#0      TCCCTGTCCAAGGTGGCCAGCGTGGCCATACGGGAGTCGTCGGGCTCGGGCTCGGGCGGG 300
consensus_2548#1      ------------------------------------------------------------
                                                                                  

consensus_2548#0      ATTTCCAAGAGCAGCGAATTGCTGTCGAGGGCAGGAACCATGGCGGCGGCGAGGGAGGCG 360
consensus_2548#1      ------------------------------------------------------------
                                                                                  

consensus_2548#0      GCGGCGGCGGCGGTACACCACGAAGGATGGATGGTGCGCTACGGCCGGAGGAAGATCGGC 420
consensus_2548#1      ------------------------------------------------------------
                                                                                  

consensus_2548#0      AGGTCCTTCTTCCACACCCGCTACTTCGTCCTCGACAGCAGGCTCCTCGCCTACTACAAG 480
consensus_2548#1      ------------------------------------------------------------
                                                                                  

consensus_2548#0      AAGAAACCCAAAGACAACATGGTGCCACTAAAATCGCTGCTGATAGACGGGAATTGCAGG 540
consensus_2548#1      ------------------------------------------------------------
                                                                                  

consensus_2548#0      GTGGAGGATAGAGGACTCAAAACACATCATGGACAAATGGTCTATGTCCTGTGCGTTTAT 600
consensus_2548#1      ------------------------------------------------------------
                                                                                  

consensus_2548#0      AATAAGAAAGAAAAGGAGCATCAGATCACGATGGGCGCGTATGATATTGAGGATGCTCTG 660
consensus_2548#1      ------------------------------------------------------------
                                                                                  

consensus_2548#0      GCCTGGAAAAAGAATATAGAACTCATTATCGGTCAGCAAGAAAATATGACCTCCAAAAAC 720
consensus_2548#1      ------------------------------------------------------------
                                                                                  

consensus_2548#0      CGCAAGGCCTTTGCTTCAATGGACTTTGATACGGAACTAGGAGGGCAGTTTATATTCTCA 780
consensus_2548#1      ------------------------------------------------------------
                                                                                  

consensus_2548#0      GACCATGACAGCGCAGCTAAAGATGAAGAGGAACGACCTATGTTGATTCGCAGGACAACT 840
consensus_2548#1      ------------------------------------------------------------
                                                                                  

consensus_2548#0      ATAGGGAATGGTCCCCCTGAATCAATACATGACTGGACCAAAGAGCATGATATCGGTCCA 900
consensus_2548#1      ------------------------------------------------------------
                                                                                  

consensus_2548#0      CCCAATCAGATTGACCCCATTCAAGTTAGCTCCAAGAAGAATTGGCGCCTACTTAGATGC 960
consensus_2548#1      ------------------------------------------------------------
                                                                                  

consensus_2548#0      CAAAATGGACTACGCATCTTTGAAGAACTTCTGGAATTCGATTATCTTGCAAGAAGCTGT 1020
consensus_2548#1      ------------------------------------------------------------
                                                                                  

consensus_2548#0      AGCAGAGCTATGCGAGCTGTTGGTGTTGTGGAAGCCACATGCGAAGCCATTTTTGGGCTG 1080
consensus_2548#1      ------------------------------------------------------------
                                                                                  

consensus_2548#0      GTGATGAGCATGGATGTAACAAGATATGAGTGGGACTGCAGCTTTCGCTATGGTAGTTTA 1140
consensus_2548#1      ------------------------------------------------------------
                                                                                  

consensus_2548#0      GTTGAAGAGGTTGACGGCCACACCGCTATACTGTATCATAAGTTGCAGTTGCACTGGTGC 1200
consensus_2548#1      ------------------------------------------------------------
                                                                                  

consensus_2548#0      CCAATGTTAGTATGGCCTCGAGACCTATGTTATGTTCGCTATTGGCGGCGTAATGACGAT 1260
consensus_2548#1      ----------------------------------------------------ATGACGAT 8
                                                                          ********

consensus_2548#0      GGAAGTTACGTTGTGCTGTTTCGATCTACAGAGCATCCAAACTGTGGACGTCAAAAAGGA 1320
consensus_2548#1      GGAAGTTACGTTGTGCTGTTTCGATCTACAGAGCATCCAAACTGTGGACGTCAAAAAGGA 68
                      ************************************************************

consensus_2548#0      TATGTGAGGGCTTTATTTGAAAGTGGAGGTTTCAAGATTTCTCCTCTCAAGTGTCGCAAC 1380
consensus_2548#1      TATGTGAGGGCTTTTATTGAAAGTGGAGGTTTCAAGATTTCTCCTCTCAAGTGTCGCAAC 128
                      **************  ********************************************

consensus_2548#0      GGAAGACCCCGCACTCAAGTTCAACACCTAATGCAGATTGATCTCAGGGGATGGCTCCTC 1440
consensus_2548#1      GGAAGACCCCGCACTCAAGTTCAACACCTAATGCAGATTGATCTCAGGGGATGGCTCCTC 188
                      ************************************************************

consensus_2548#0      AACTACTCTCCTTCCTTTCAGTATCATTCTTTGCTGCAGATACAAAACTGTGTAGCCGGC 1500
consensus_2548#1      AACTACTCTCCTTCCTTTCAGTATCATTCTTTGCTGCAGATACAAAACTGTGTAGCCGGC 248
                      ************************************************************

consensus_2548#0      CTACGAGAATACTTCTCCCAAACAGACGAAACACATATAACTCCAAGGATTCCTGTGATG 1560
consensus_2548#1      CTACGAGAATACTTCTCCCAAACAGACGAAACACATATAACTCCAAGGATTCCTGTGATG 308
                      ************************************************************

consensus_2548#0      GAAAACATGGTTGACACATCTGCAGTACAGAAAGATGACAAGAAGAGTACCGAAGAAGTA 1620
consensus_2548#1      GAAAACATGGTTGACACATCTGCAGTACAGAAAGATGACAAGAAGAGTACCGAAGAAGTA 368
                      ************************************************************

consensus_2548#0      GACTCCAAGACTAAAACACCAGATCGAGGACAAGCGGACAGTAAAAACATGGGAATCATT 1680
consensus_2548#1      GACTCCAAGACTAAAACACCAGATCGAGGACAAGCGGACAGTAAAAACATGGGAATCATT 428
                      ************************************************************

consensus_2548#0      GATGAAGAAACAGACGAGGATGAGGACTATCAGGTTCCTGAAGCTAACATAGAGGAAGAT 1740
consensus_2548#1      GATGAAGAAACAGACGAGGATGAGGACTATCAGGTTCCTGAAGCTAACATAGAGGAAGAT 488
                      ************************************************************

consensus_2548#0      CCTAACAAAGATGCTAAGCGTGCAGACGAACCACCAGAAAAGATTGATCTATCATGCTTT 1800
consensus_2548#1      CCTAACAAAGATGCTAAGCGTGCAGACGAACCACCAGAAAAGATTGATCTATCATGCTTT 548
                      ************************************************************

consensus_2548#0      TCGGGCATTCTTCGTTGCGATGCGGATGAGAAAAGCCGAAACTGTTGGACAGTACCTGAC 1860
consensus_2548#1      TCGGGCATTCTTCGTTGCGATGCGGATGAGAAAAGCCGAAACTGTTGGACAGTACCTGAC 608
                      ************************************************************

consensus_2548#0      AGCAAGCTGTTTAAAGTCCGTAGCAAGAACTTCCCGCATGATAAATCAAAGATACCTGCA 1920
consensus_2548#1      AGCAAGCTGTTTAAAGTCCGTAGCAAGAACTTCCCGCATGATAAATCAAAGATACCTGCA 668
                      ************************************************************

consensus_2548#0      GCGAGTTACCTGATGGAGCTTGCGGCCATTGACTGGTTTAAGGACAGCAAGCGTATGGAT 1980
consensus_2548#1      GCGAGTTACCTGATGGAGCTTGCGGCCATTGACTGGTTTAAGGACAGCAAGCGTATGGAT 728
                      ************************************************************

consensus_2548#0      AACGTAGGCAGGCAGAAAGGCTGTGTAGCCCAGGTAGCTGCTGAGAAAGGGATGCATACA 2040
consensus_2548#1      AACGTAGGCAGGCAGAAAGGCTGTGTAGCCCAGGTAGCTGCTGAGAAAGGGATGCATACA 788
                      ************************************************************

consensus_2548#0      TTTGTTGCCAACATACAGATCCCTGGATCAACTCATTACAGCTTGGTGATGTACTTCGTG 2100
consensus_2548#1      TTTGTTGCCAACATACAGATCCCTGGATCAACTCATTACAGCTTGGTGATGTACTTCGTG 848
                      ************************************************************

consensus_2548#0      ACAAAGTCGCTGAAGAAGGGATCACTGCTGCAGCGATTCTTCGATGGGGATGATGAGTTC 2160
consensus_2548#1      ACAAAGTCGCTGAAGAAGGGATCACTGCTGCAGCGATTCTTCGATGGGGATGATGAGTTC 908
                      ************************************************************

consensus_2548#0      CGCAATAGCAGGCTGAAGCTGATACCCTCTGTACCCAAGGGATCATGGATAGTGCGGCAG 2220
consensus_2548#1      CGCAATAGCAGGCTGAAGCTGATACCCTCTGTACCCAAGGGATCATGGATAGTGCGGCAG 968
                      ************************************************************

consensus_2548#0      AGTGTAGGGAGCACGCCGTGCTTGCTGGGGAAGGCGGTGGATTGCAGCTACGTGCGTGGA 2280
consensus_2548#1      AGTGTAGGGAGCACGCCGTGCTT------------------------------------- 991
                      ***********************                                     

consensus_2548#0      GCCGGATACCTGGAGGTGGACGTCGACATTGGGTCGTCGGCGGTGGCCAACGGGGTGCTG 2340
consensus_2548#1      ------------------------------------------------------------
                                                                                  

consensus_2548#0      GGTTTGGTGTTTGGTGTGGTGACGACGCTGGTGGTGGACATGGCGTTCCTAATACAGGCC 2400
consensus_2548#1      ------------------------------------------------------------
                                                                                  

consensus_2548#0      AACACCTACGAGGAGCTCCCGAGCAGGTCATCGGCGCCGCCCGTCTCGCTCACGTCGAAC 2460
consensus_2548#1      ------------------------------------------------------------
                                                                                  

consensus_2548#0      CCGCCGCCGCTATCGTCCCCCAGGACCTTACTCCCCCTCCTCCTGCCCTTGCCGACGACG 2520
consensus_2548#1      ------------------------------------------------------------
                                                                                  

consensus_2548#0      ACAACGCCGCTGCTTCTTCCTCCGAGGATGATCATTTTTCCAAGAAAACCAACTAAGCTA 2580
consensus_2548#1      ---------------CTTCCTACGAGGATGATCATTTGTCCAAGAAAACCAACTAAGCTA 1036
                                     ****** *************** **********************

consensus_2548#0      GCACCTCTCTCAACGCACGCACTGCAACTTATCAATCATTTATCTTCTTGTAATTTCTAA 2640
consensus_2548#1      GCACCTCTCTCAACGCACGCACTGCAACTTATCAATCATTTATCTTCTTGTAATTTCTAA 1096
                      ************************************************************

consensus_2548#0      TTATTTCCGAGGCTCATAGCAAGCTTTGTTTTTTTTCTTTTCATCTTTTTTTTTATCTCG 2700
consensus_2548#1      TTATTTCCGAGGCTCATAGCAAGCTTTGTTTTTTTTCTTTTCATCTTTTTTTTTATCTCG 1156
                      ************************************************************

consensus_2548#0      TTAAGTTGTTTGCAAAGTACAGCTGGTTTTCTTCTACGTAGGAACAAAGATAAATCTAGC 2760
consensus_2548#1      TTAAGTTGTTTGCAAAGTACAGCTGGTTTTCTTCTACGTAGGAACAAAGATAAATCTAGC 1216
                      ************************************************************

consensus_2548#0      TAGTGACAGTATTTCGTTGGAACCTAATATTATAGACTGAGATATTTTGTTTAGGCTTAG 2820
consensus_2548#1      TAGTGACAGTATTTCGTTGGAACCTAATATTATAGACTGAGATATTTT------------ 1264
                      ************************************************            

consensus_2548#0      ATTTGCTGTCTTTGGCTTTAAGTCAGACTTTTAATTAACTTACACTCCCTCCATTTTTTT 2880
consensus_2548#1      ------------------------------------------------------------
                                                                                  

consensus_2548#0      AATTGACGACGCCATTGACTTTTGAACACATGTTTGACCATTCGCTTTATTTA 2933
consensus_2548#1      -----------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)