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Oryza sativa
cluster # 2560 cluster # 2560       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2560#0 length = 2708 sequences # 1  
consensus_2560#1 length = 1658 sequences # 1  

consensusID : consensus_2560#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2708
fasta sequence
                              [ATCATCTGGAATCCAACGCCTGACCTCGCCGCGCGGCGGCATGGCGCCGCCGGAGTTGACGGATGACGTCGTGGAGGAGATCCTGCTCCGCCTCCCGCCGGACGATCCCTCGTGCTCCGCCCGCGCCTCCGCCGTCTGCAAGCCCTGGCGCCGTCTCCTCTCCGACCCCGTCTTCCTCCGCCGCCACCGCGCGTTCCACCGCCGACGAGCACCTCCGTTGCTGGGCTTCATCCACCACGTCTCCGACGAACCCGCCCGCCGCGTCCCCAGCTTCGCGCAGTTCGTCCCGACCACCGCGTTCCGCCCCGCCGAACTGGAGCACAAGAATTGTTGGCCACTCGACTGCCGCCACGGCCGCGCCCTCTTCCAGTCCAGCAACGTCGAGCTCACCATCTGGGACCCCATGACCGGCGACGTGCGGCGGCAGCGCGAGCCCTACGGCACCCTCTGCACGTTCGCCACCGCCGCCGTGCTCTGCGCCGTGCCCGGCTGCGACCACCACGACTGCCACGGAGGCCCCTTCGTCTTGGTCTTCGTCGGCAACGACGAGGACGACGACGGGGAGGAGATCGCGTCGGCATCCTCTTACTCGTCCGAGACCGGGACATGGACCGCCGCTTCCACCGTCCACCATGACGATTCCCTCGAACTCGAAAGCAAGCCCAGCGTCCTCGCCGGAGACGCGGTCCACTTCCTCACCTACTTCGGCAAAGCCATCCTGCGCTACGACCTCACCAAGCTGGAACTCTCGGTGATCCTCCCGCCGGTGGCGTACGGGGACGGCGACGCTCTCCTCATGACGGCGGAGGACGGCGAGCTGGGGCTCGCCCTCTTCGACGGCGAGGCCTCCATCCACCTCTGGGCGAGGGTGGCGGGTGCAGGGTGGGTGCGGCGCAATGTGATCGACCTCTACGCTGTTCTCCCCTTCTTTGATCCTGTACACTCGCTGTCCCTGGTTGGCTTCGCGGAGGGCACCGACATCATCTTCCTCCACGCCATTCATGGCGACTACAGGATGGAGCTCAAGTCACTGCAGATCAGCAAGCTGTGGGAGAAGGACAGATGCTTCAATATCTTCCCCTACATGAGCTTCTTCGTTCCAGGTACATCCTTTACCAATTTGCTAGCATTAGGATTTGGGGATCGTTCAGTTCAAAGTTTCAGAATGGAGCATGCCTCTTGCTCAATTCACCAATCGTGATTCAGGGATATCTTTTCTGTGTGTCTCAGACCTTCCGAAAGGAAAAAAGAATGTTCAGTATGTTTCTGACGGTGACATGAAAACAATGTTGAATATACTTGTTTGGCTCATAATTAGCATCAATCAGATAGTTATAAAAAGTTCTGAAAATAATTGATAACACTGATAAAAGAGGGATTCATTGATATTCAGTACTAGATTCAGTATGCTTCAGAATTCAGAGAGTGACATGAAAACATTTTTTTGGATATTTGGTTGGTTCACAAGTAATACTAGAATGGGCGACGATAATGGATTGAGAGAAGTATATGTGACACTTGGAACTTTAACTTGTTAAGGATCCACTAGAATGGGCAGATATATTATTCTGATAAACCTTTTTTGTGTGTTGACAATAACGATTATAACTTGTCTGCACCCTTTTCAGGTCGTGATAAGACAAATTGCCATCGCCAGCAATTGCAGCAGTAAACTAGTAGCAAACAATGTGTCCAAATTTTGCTAATCTGTTGGGTTCAATTAAGCGTCTTGTTGTTGGTATCCTAGGAGGTCTTGTTTATTTACTTGAAGCTAGTGATATGGAAAACTCTGGACTGAAGGTGATGCATCCCATCTTTGCTGATCTTGGCCTTAGTTCAAGTTGGTTGTTTTCACTTTATTTCATGTCAATCTTGCTGTCAAGCTGTAATAATTTGCAAAACTAGCACAATGTCTTCAGGATGTCGAAGAATGTAAGACGTTCTGGCTGTTTGCTAAAACTGATGGGATATGGTTGGTTCATAAGTAATACTAATTCAGCAACATTAACAAAACGGTGATGATAATGTGCTTGGGGAAAAGTATATGTGACACTGGGTACTTTAACTTGTCGAGGATCAACTAGAATGGGCAAGATATTTTGTTCTGTTATCATTTTCTGTCTGTTGACAATGCTTGTTTTTGGTACCTTTTGTCAGTAGTAGGAATGCTCTCTCAAAATACTTTGTGAATATTGGTTGTAAAACGATTATAACTTTTCTGCATCTTTTTCAGGTCGTGATAGAAACAAATTGCCATCTCCAACAATTATAGCATCAATTTAGCAAACAAAATGGGTCCAAATTATGCTAATACGTCAGATCGAGCCTCTAGCTGTTGGCCTCTTGGTTGATTACTTGAAGCTAGTGATGTGCAAAACTGTTGACTGAAGCTGATGCATCCCTTCTTTGCTGCTTGGTTAGTAGTCATAAGAAATTTGATAGGTTGAGAGGATTCTTCAGAAATTTCTTTTGGTGTTGCTGTGAGTGCTTTATTACACTGCTAAATGAAGAGACGATTTCTTATTTTTGGTGTGTGTGTACTGTGTGTCTGTGTGGTGTGTCATTCCATTAAGGAGTTCAGACACAGACACACAAAAGCATGGTGTGTCATTCCATTAAGGAGTTCAGGCCCTGTTTAGTTCCCACGCAAAAAATTTTCACCATGTCACAATGTTTGGACACATGCATGGAGTATTAAATATAGAAAA]

[+] EMBL AK070767             [ATCATCTGGAATCCAACGCCTGACCTCGCCGCGCGGCGGCATGGCGCCGCCGGAGTTGACGGATGACGTCGTGGAGGAGATCCTGCTCCGCCTCCCGCCGGACGATCCCTCGTGCTCCGCCCGCGCCTCCGCCGTCTGCAAGCCCTGGCGCCGTCTCCTCTCCGACCCCGTCTTCCTCCGCCGCCACCGCGCGTTCCACCGCCGACGAGCACCTCCGTTGCTGGGCTTCATCCACCACGTCTCCGACGAACCCGCCCGCCGCGTCCCCAGCTTCGCGCAGTTCGTCCCGACCACCGCGTTCCGCCCCGCCGAACTGGAGCACAAGAATTGTTGGCCACTCGACTGCCGCCACGGCCGCGCCCTCTTCCAGTCCAGCAACGTCGAGCTCACCATCTGGGACCCCATGACCGGCGACGTGCGGCGGCAGCGCGAGCCCTACGGCACCCTCTGCACGTTCGCCACCGCCGCCGTGCTCTGCGCCGTGCCCGGCTGCGACCACCACGACTGCCACGGAGGCCCCTTCGTCTTGGTCTTCGTCGGCAACGACGAGGACGACGACGGGGAGGAGATCGCGTCGGCATCCTCTTACTCGTCCGAGACCGGGACATGGACCGCCGCTTCCACCGTCCACCATGACGATTCCCTCGAACTCGAAAGCAAGCCCAGCGTCCTCGCCGGAGACGCGGTCCACTTCCTCACCTACTTCGGCAAAGCCATCCTGCGCTACGACCTCACCAAGCTGGAACTCTCGGTGATCCTCCCGCCGGTGGCGTACGGGGACGGCGACGCTCTCCTCATGACGGCGGAGGACGGCGAGCTGGGGCTCGCCCTCTTCGACGGCGAGGCCTCCATCCACCTCTGGGCGAGGGTGGCGGGTGCAGGGTGGGTGCGGCGCAATGTGATCGACCTCTACGCTGTTCTCCCCTTCTTTGATCCTGTACACTCGCTGTCCCTGGTTGGCTTCGCGGAGGGCACCGACATCATCTTCCTCCACGCCATTCATGGCGACTACAGGATGGAGCTCAAGTCACTGCAGATCAGCAAGCTGTGGGAGAAGGACAGATGCTTCAATATCTTCCCCTACATGAGCTTCTTCGTTCCAGGTACATCCTTTACCAATTTGCTAGCATTAGGATTTGGGGATCGTTCAGTTCAAAGTTTCAGAATGGAGCATGCCTCTTGCTCAATTCACCAATCGTGATTCAGGGATATCTTTTCTGTGTGTCTCAGACCTTCCGAAAGGAAAAAAGAATGTTCAGTATGTTTCTGACGGTGACATGAAAACAATGTTGAATATACTTGTTTGGCTCATAATTAGCATCAATCAGATAGTTATAAAAAGTTCTGAAAATAATTGATAACACTGATAAAAGAGGGATTCATTGATATTCAGTACTAGATTCAGTATGCTTCAGAATTCAGAGAGTGACATGAAAACATTTTTTTGGATATTTGGTTGGTTCACAAGTAATACTAGAATGGGCGACGATAATGGATTGAGAGAAGTATATGTGACACTTGGAACTTTAACTTGTTAAGGATCCACTAGAATGGGCAGATATATTATTCTGATAAACCTTTTTTGTGTGTTGACAATAACGATTATAACTTGTCTGCACCCTTTTCAGGTCGTGATAAGACAAATTGCCATCGCCAGCAATTGCAGCAGTAAACTAGTAGCAAACAATGTGTCCAAATTTTGCTAATCTGTTGGGTTCAATTAAGCGTCTTGTTGTTGGTATCCTAGGAGGTCTTGTTTATTTACTTGAAGCTAGTGATATGGAAAACTCTGGACTGAAGGTGATGCATCCCATCTTTGCTGATCTTGGCCTTAGTTCAAGTTGGTTGTTTTCACTTTATTTCATGTCAATCTTGCTGTCAAGCTGTAATAATTTGCAAAACTAGCACAATGTCTTCAGGATGTCGAAGAATGTAAGACGTTCTGGCTGTTTGCTAAAACTGATGGGATATGGTTGGTTCATAAGTAATACTAATTCAGCAACATTAACAAAACGGTGATGATAATGTGCTTGGGGAAAAGTATATGTGACACTGGGTACTTTAACTTGTCGAGGATCAACTAGAATGGGCAAGATATTTTGTTCTGTTATCATTTTCTGTCTGTTGACAATGCTTGTTTTTGGTACCTTTTGTCAGTAGTAGGAATGCTCTCTCAAAATACTTTGTGAATATTGGTTGTAAAACGATTATAACTTTTCTGCATCTTTTTCAGGTCGTGATAGAAACAAATTGCCATCTCCAACAATTATAGCATCAATTTAGCAAACAAAATGGGTCCAAATTATGCTAATACGTCAGATCGAGCCTCTAGCTGTTGGCCTCTTGGTTGATTACTTGAAGCTAGTGATGTGCAAAACTGTTGACTGAAGCTGATGCATCCCTTCTTTGCTGCTTGGTTAGTAGTCATAAGAAATTTGATAGGTTGAGAGGATTCTTCAGAAATTTCTTTTGGTGTTGCTGTGAGTGCTTTATTACACTGCTAAATGAAGAGACGATTTCTTATTTTTGGTGTGTGTGTACTGTGTGTCTGTGTGGTGTGTCATTCCATTAAGGAGTTCAGACACAGACACACAAAAGCATGGTGTGTCATTCCATTAAGGAGTTCAGGCCCTGTTTAGTTCCCACGCAAAAAATTTTCACCATGTCACAATGTTTGGACACATGCATGGAGTATTAAATATAGAAAA]


>consensus_2560#0 ATCATCTGGAATCCAACGCCTGACCTCGCCGCGCGGCGGCATGGCGCCGCCGGAGTTGAC GGATGACGTCGTGGAGGAGATCCTGCTCCGCCTCCCGCCGGACGATCCCTCGTGCTCCGC CCGCGCCTCCGCCGTCTGCAAGCCCTGGCGCCGTCTCCTCTCCGACCCCGTCTTCCTCCG CCGCCACCGCGCGTTCCACCGCCGACGAGCACCTCCGTTGCTGGGCTTCATCCACCACGT CTCCGACGAACCCGCCCGCCGCGTCCCCAGCTTCGCGCAGTTCGTCCCGACCACCGCGTT CCGCCCCGCCGAACTGGAGCACAAGAATTGTTGGCCACTCGACTGCCGCCACGGCCGCGC CCTCTTCCAGTCCAGCAACGTCGAGCTCACCATCTGGGACCCCATGACCGGCGACGTGCG GCGGCAGCGCGAGCCCTACGGCACCCTCTGCACGTTCGCCACCGCCGCCGTGCTCTGCGC CGTGCCCGGCTGCGACCACCACGACTGCCACGGAGGCCCCTTCGTCTTGGTCTTCGTCGG CAACGACGAGGACGACGACGGGGAGGAGATCGCGTCGGCATCCTCTTACTCGTCCGAGAC CGGGACATGGACCGCCGCTTCCACCGTCCACCATGACGATTCCCTCGAACTCGAAAGCAA GCCCAGCGTCCTCGCCGGAGACGCGGTCCACTTCCTCACCTACTTCGGCAAAGCCATCCT GCGCTACGACCTCACCAAGCTGGAACTCTCGGTGATCCTCCCGCCGGTGGCGTACGGGGA CGGCGACGCTCTCCTCATGACGGCGGAGGACGGCGAGCTGGGGCTCGCCCTCTTCGACGG CGAGGCCTCCATCCACCTCTGGGCGAGGGTGGCGGGTGCAGGGTGGGTGCGGCGCAATGT GATCGACCTCTACGCTGTTCTCCCCTTCTTTGATCCTGTACACTCGCTGTCCCTGGTTGG CTTCGCGGAGGGCACCGACATCATCTTCCTCCACGCCATTCATGGCGACTACAGGATGGA GCTCAAGTCACTGCAGATCAGCAAGCTGTGGGAGAAGGACAGATGCTTCAATATCTTCCC CTACATGAGCTTCTTCGTTCCAGGTACATCCTTTACCAATTTGCTAGCATTAGGATTTGG GGATCGTTCAGTTCAAAGTTTCAGAATGGAGCATGCCTCTTGCTCAATTCACCAATCGTG ATTCAGGGATATCTTTTCTGTGTGTCTCAGACCTTCCGAAAGGAAAAAAGAATGTTCAGT ATGTTTCTGACGGTGACATGAAAACAATGTTGAATATACTTGTTTGGCTCATAATTAGCA TCAATCAGATAGTTATAAAAAGTTCTGAAAATAATTGATAACACTGATAAAAGAGGGATT CATTGATATTCAGTACTAGATTCAGTATGCTTCAGAATTCAGAGAGTGACATGAAAACAT TTTTTTGGATATTTGGTTGGTTCACAAGTAATACTAGAATGGGCGACGATAATGGATTGA GAGAAGTATATGTGACACTTGGAACTTTAACTTGTTAAGGATCCACTAGAATGGGCAGAT ATATTATTCTGATAAACCTTTTTTGTGTGTTGACAATAACGATTATAACTTGTCTGCACC CTTTTCAGGTCGTGATAAGACAAATTGCCATCGCCAGCAATTGCAGCAGTAAACTAGTAG CAAACAATGTGTCCAAATTTTGCTAATCTGTTGGGTTCAATTAAGCGTCTTGTTGTTGGT ATCCTAGGAGGTCTTGTTTATTTACTTGAAGCTAGTGATATGGAAAACTCTGGACTGAAG GTGATGCATCCCATCTTTGCTGATCTTGGCCTTAGTTCAAGTTGGTTGTTTTCACTTTAT TTCATGTCAATCTTGCTGTCAAGCTGTAATAATTTGCAAAACTAGCACAATGTCTTCAGG ATGTCGAAGAATGTAAGACGTTCTGGCTGTTTGCTAAAACTGATGGGATATGGTTGGTTC ATAAGTAATACTAATTCAGCAACATTAACAAAACGGTGATGATAATGTGCTTGGGGAAAA GTATATGTGACACTGGGTACTTTAACTTGTCGAGGATCAACTAGAATGGGCAAGATATTT TGTTCTGTTATCATTTTCTGTCTGTTGACAATGCTTGTTTTTGGTACCTTTTGTCAGTAG TAGGAATGCTCTCTCAAAATACTTTGTGAATATTGGTTGTAAAACGATTATAACTTTTCT GCATCTTTTTCAGGTCGTGATAGAAACAAATTGCCATCTCCAACAATTATAGCATCAATT TAGCAAACAAAATGGGTCCAAATTATGCTAATACGTCAGATCGAGCCTCTAGCTGTTGGC CTCTTGGTTGATTACTTGAAGCTAGTGATGTGCAAAACTGTTGACTGAAGCTGATGCATC CCTTCTTTGCTGCTTGGTTAGTAGTCATAAGAAATTTGATAGGTTGAGAGGATTCTTCAG AAATTTCTTTTGGTGTTGCTGTGAGTGCTTTATTACACTGCTAAATGAAGAGACGATTTC TTATTTTTGGTGTGTGTGTACTGTGTGTCTGTGTGGTGTGTCATTCCATTAAGGAGTTCA GACACAGACACACAAAAGCATGGTGTGTCATTCCATTAAGGAGTTCAGGCCCTGTTTAGT TCCCACGCAAAAAATTTTCACCATGTCACAATGTTTGGACACATGCATGGAGTATTAAAT ATAGAAAA



consensusID : consensus_2560#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1658
fasta sequence
                              [AGATAATCCCAAATTTCTACTCTGAACCCCAAACGCAGAAGCCGGCGAGGCGGCGAGCCGGAGAAGGATGAATCCGCCGGAGCTGATGGACGACCTCGTCGACGAGATCCTCCTCCGCCTCCCCCCCGACGAGCCCGCCTGCCTCGCCCGCGCCTCCGCCGTCTGCAAGCGCTGGCGCCGCCTCCTCTCCGACCGGGCCTTCCTCCTCCGCCGCCGACGCCGCGCGCCGCCTCCCCTGCTGGGTTTCCTCCACAACCTCGACAACGCCGACCACCCCGACCGCTTCGTCCCCACCACCGCCCTCCCGATCCCCCCGCCGCCACCCGAGCTCCACTGCGGGATGGCCCTCGACTGCCGCCATGGCTGCGCCCTCCTCGACGCCTACCCCTCCAGGATCGACCTCGTCGTGTGGCACCCCATGACGGGCCACCTGCTGCGGCGGCTTCCCCGCCCCGACGTCCCGTACCTCTTGTACTACAACGCCGCGGTGCTCTGCGCCGCCGCCGCCGCCGGCTGCGACCACCTCGACTGCCACGAGGGCCCCTTCCGCGTCGTCGTGGTGGGCACCGAGGAGGACAACGAGGCGTGGGCGACCGTGTACTCGTCGGAGTCCGACGAGTGGAGCCCACCGACCTCCGCTCGCCTCGCCCGAGGACCCGAGTTCTGCGTCGAGGGCAAGCCCGCCACCCTCATCGGAGATTCGCTCTACTTCGCCCTCGTGTTTGGTATCGGAGTCGTCAAGTTCGACATGAAGCGCCATCGCCTCTCCCTCATCGATCCGCCGGCTGAGCTCGACGATGGCTTCGTGCTCATGCCGCTGGACAACGATGGCGTGCTTGGGCTCGCGGCCGTGGAGGATCACAGCCTCCTCTCTGTGTGGTCAATGGATGTGAGCCTGGATCATGGACATGGTGTGGCAAATTGGGAGAAGTGCAGGGTCATTGAGCTAGACAGTCTGCTACCAAATCTTGATCACTCTACCCCAGTGCTACCAATTGGATTTGTGGAGGGTGCCAATATCATCTTCCTGAGAACAGATGCGGGTGTCTTCACACTTGAGCTCAGATCAATGCGTGTCACCAAGGTGTGCAAGATGGGTTCTTCTACGCTGTCGTGCCGTACACGAGCTTCTACATTCCTGGTGTCCATCTCCAGCAGCAGCACAGCGGACCTCAGATCAGTAATGGCCGGGCATGGGGATCGCAGGCTGCTAACATGAGGCGTGGCAGCAGTGAGCAGCCGAGAGAGCGTGCTCCACTGCATCAGCAGCGACGGGCAGGACGGCCGGTGAACAGCCAACGTCCTACTGGTGATATGGTCCGTTCTTCAGGCCGTGCTAGCAGATTGGCATCTCAAGTGCGGCCTCCATGGAGACCCTAATGATTCGCAAGGTGGCAATAGCTGACAATAATGTTTAATCTATCGTGCAATTTACAGGTGGTATATTGCTAATCGTCGGTTTTAGTCATTTGTGCGATCAAGAAGAATATCTTATGGTTTTGAATGCATTGTCAGTACAGAATATCTAAACATGGAAAGAGCAGATTAACTGAGAGGAGTGAGAGCTCTATCTCGTATCCGCTAACTGAATTTCCAGTTATAACATCCAATTTGTTTATGGGCTTTCCCATTGTCATACTGCAAGTCTGGTGAATGTT]

[+] EMBL AK107049             [AGATAATCCCAAATTTCTACTCTGAACCCCAAACGCAGAAGCCGGCGAGGCGGCGAGCCGGAGAAGGATGAATCCGCCGGAGCTGATGGACGACCTCGTCGACGAGATCCTCCTCCGCCTCCCCCCCGACGAGCCCGCCTGCCTCGCCCGCGCCTCCGCCGTCTGCAAGCGCTGGCGCCGCCTCCTCTCCGACCGGGCCTTCCTCCTCCGCCGCCGACGCCGCGCGCCGCCTCCCCTGCTGGGTTTCCTCCACAACCTCGACAACGCCGACCACCCCGACCGCTTCGTCCCCACCACCGCCCTCCCGATCCCCCCGCCGCCACCCGAGCTCCACTGCGGGATGGCCCTCGACTGCCGCCATGGCTGCGCCCTCCTCGACGCCTACCCCTCCAGGATCGACCTCGTCGTGTGGCACCCCATGACGGGCCACCTGCTGCGGCGGCTTCCCCGCCCCGACGTCCCGTACCTCTTGTACTACAACGCCGCGGTGCTCTGCGCCGCCGCCGCCGCCGGCTGCGACCACCTCGACTGCCACGAGGGCCCCTTCCGCGTCGTCGTGGTGGGCACCGAGGAGGACAACGAGGCGTGGGCGACCGTGTACTCGTCGGAGTCCGACGAGTGGAGCCCACCGACCTCCGCTCGCCTCGCCCGAGGACCCGAGTTCTGCGTCGAGGGCAAGCCCGCCACCCTCATCGGAGATTCGCTCTACTTCGCCCTCGTGTTTGGTATCGGAGTCGTCAAGTTCGACATGAAGCGCCATCGCCTCTCCCTCATCGATCCGCCGGCTGAGCTCGACGATGGCTTCGTGCTCATGCCGCTGGACAACGATGGCGTGCTTGGGCTCGCGGCCGTGGAGGATCACAGCCTCCTCTCTGTGTGGTCAATGGATGTGAGCCTGGATCATGGACATGGTGTGGCAAATTGGGAGAAGTGCAGGGTCATTGAGCTAGACAGTCTGCTACCAAATCTTGATCACTCTACCCCAGTGCTACCAATTGGATTTGTGGAGGGTGCCAATATCATCTTCCTGAGAACAGATGCGGGTGTCTTCACACTTGAGCTCAGATCAATGCGTGTCACCAAGGTGTGCAAGATGGGTTCTTCTACGCTGTCGTGCCGTACACGAGCTTCTACATTCCTGGTGTCCATCTCCAGCAGCAGCACAGCGGACCTCAGATCAGTAATGGCCGGGCATGGGGATCGCAGGCTGCTAACATGAGGCGTGGCAGCAGTGAGCAGCCGAGAGAGCGTGCTCCACTGCATCAGCAGCGACGGGCAGGACGGCCGGTGAACAGCCAACGTCCTACTGGTGATATGGTCCGTTCTTCAGGCCGTGCTAGCAGATTGGCATCTCAAGTGCGGCCTCCATGGAGACCCTAATGATTCGCAAGGTGGCAATAGCTGACAATAATGTTTAATCTATCGTGCAATTTACAGGTGGTATATTGCTAATCGTCGGTTTTAGTCATTTGTGCGATCAAGAAGAATATCTTATGGTTTTGAATGCATTGTCAGTACAGAATATCTAAACATGGAAAGAGCAGATTAACTGAGAGGAGTGAGAGCTCTATCTCGTATCCGCTAACTGAATTTCCAGTTATAACATCCAATTTGTTTATGGGCTTTCCCATTGTCATACTGCAAGTCTGGTGAATGTT]


>consensus_2560#1 AGATAATCCCAAATTTCTACTCTGAACCCCAAACGCAGAAGCCGGCGAGGCGGCGAGCCG GAGAAGGATGAATCCGCCGGAGCTGATGGACGACCTCGTCGACGAGATCCTCCTCCGCCT CCCCCCCGACGAGCCCGCCTGCCTCGCCCGCGCCTCCGCCGTCTGCAAGCGCTGGCGCCG CCTCCTCTCCGACCGGGCCTTCCTCCTCCGCCGCCGACGCCGCGCGCCGCCTCCCCTGCT GGGTTTCCTCCACAACCTCGACAACGCCGACCACCCCGACCGCTTCGTCCCCACCACCGC CCTCCCGATCCCCCCGCCGCCACCCGAGCTCCACTGCGGGATGGCCCTCGACTGCCGCCA TGGCTGCGCCCTCCTCGACGCCTACCCCTCCAGGATCGACCTCGTCGTGTGGCACCCCAT GACGGGCCACCTGCTGCGGCGGCTTCCCCGCCCCGACGTCCCGTACCTCTTGTACTACAA CGCCGCGGTGCTCTGCGCCGCCGCCGCCGCCGGCTGCGACCACCTCGACTGCCACGAGGG CCCCTTCCGCGTCGTCGTGGTGGGCACCGAGGAGGACAACGAGGCGTGGGCGACCGTGTA CTCGTCGGAGTCCGACGAGTGGAGCCCACCGACCTCCGCTCGCCTCGCCCGAGGACCCGA GTTCTGCGTCGAGGGCAAGCCCGCCACCCTCATCGGAGATTCGCTCTACTTCGCCCTCGT GTTTGGTATCGGAGTCGTCAAGTTCGACATGAAGCGCCATCGCCTCTCCCTCATCGATCC GCCGGCTGAGCTCGACGATGGCTTCGTGCTCATGCCGCTGGACAACGATGGCGTGCTTGG GCTCGCGGCCGTGGAGGATCACAGCCTCCTCTCTGTGTGGTCAATGGATGTGAGCCTGGA TCATGGACATGGTGTGGCAAATTGGGAGAAGTGCAGGGTCATTGAGCTAGACAGTCTGCT ACCAAATCTTGATCACTCTACCCCAGTGCTACCAATTGGATTTGTGGAGGGTGCCAATAT CATCTTCCTGAGAACAGATGCGGGTGTCTTCACACTTGAGCTCAGATCAATGCGTGTCAC CAAGGTGTGCAAGATGGGTTCTTCTACGCTGTCGTGCCGTACACGAGCTTCTACATTCCT GGTGTCCATCTCCAGCAGCAGCACAGCGGACCTCAGATCAGTAATGGCCGGGCATGGGGA TCGCAGGCTGCTAACATGAGGCGTGGCAGCAGTGAGCAGCCGAGAGAGCGTGCTCCACTG CATCAGCAGCGACGGGCAGGACGGCCGGTGAACAGCCAACGTCCTACTGGTGATATGGTC CGTTCTTCAGGCCGTGCTAGCAGATTGGCATCTCAAGTGCGGCCTCCATGGAGACCCTAA TGATTCGCAAGGTGGCAATAGCTGACAATAATGTTTAATCTATCGTGCAATTTACAGGTG GTATATTGCTAATCGTCGGTTTTAGTCATTTGTGCGATCAAGAAGAATATCTTATGGTTT TGAATGCATTGTCAGTACAGAATATCTAAACATGGAAAGAGCAGATTAACTGAGAGGAGT GAGAGCTCTATCTCGTATCCGCTAACTGAATTTCCAGTTATAACATCCAATTTGTTTATG GGCTTTCCCATTGTCATACTGCAAGTCTGGTGAATGTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2560#0      ----------------ATCATCTGGAATCCAA-CGCCTGACCTCGCCGCGCGGCG----- 38
consensus_2560#1      AGATAATCCCAAATTTCTACTCTGAACCCCAAACGCAGAAGCCGGCGAGGCGGCGAGCCG 60
                                       *  **** *  **** ***   * *  **   ******     

consensus_2560#0      -----GCATGGCGCCGCCGGAGTTGACGGATGACGTCGTGGAGGAGATCCTGCTCCGCCT 93
consensus_2560#1      GAGAAGGATGAATCCGCCGGAGCTGATGGACGACCTCGTCGACGAGATCCTCCTCCGCCT 120
                           * ***   ********* *** *** *** **** ** ******** ********

consensus_2560#0      CCCGCCGGACGATCCCTCGTGCTCCGCCCGCGCCTCCGCCGTCTGCAAGCCCTGGCGCCG 153
consensus_2560#1      CCCCCCCGACGAGCCCGCCTGCCTCGCCCGCGCCTCCGCCGTCTGCAAGCGCTGGCGCCG 180
                      *** ** ***** *** * ***  ************************** *********

consensus_2560#0      TCTCCTCTCCGACCCCGTCTTCCTCCGCCGCCACCGCGCGTTCCACCGCCGACGAGCACC 213
consensus_2560#1      CCTCCTCTCCGACCGGGCCTTCCTCCTCCGCCGCCGA---------CGCCGCGCGCCGCC 231
                       *************  * ******** ***** ***          *****     * **

consensus_2560#0      TCCGTTGCTGGGCTTCATCCACCACGTCT------CCGACGAACCCGCCCGCCGCGTCCC 267
consensus_2560#1      TCCCCTGCTGGGTTTCCTCCACAACCTCGACAACGCCGACCACCCCGACCGCTTCGTCCC 291
                      ***  ******* *** ***** ** **       ***** * **** ****  ******

consensus_2560#0      CAGCTTCGCGCAGTTCGTCCCGACCACCGCGTTCCGCCCCGCCGAACTGGAGCACAAGAA 327
consensus_2560#1      CACCACCGCCC------TCCCGATCCCCCCG--CCGCCAC-CCGAGCTCCACTGCGGGA- 341
                      ** *  *** *      ****** * ** **  ***** * **** **  *   *  ** 

consensus_2560#0      TTGTTGGCCACTCGACTGCCGCCACGGCCGCGCCCTCTTC------CAGTCCAGCAACGT 381
consensus_2560#1      ----TGGCC-CTCGACTGCCGCCATGGCTGCGCCCTCCTCGACGCCTACCCCTCCAGGAT 396
                          ***** ************** *** ******** **       *  **  **   *

consensus_2560#0      CGAGCTCACCATCTGGGACCCCATGACCGGCGACGTGCGGCGGCAGCGCGAGCCCTACGG 441
consensus_2560#1      CGACCTCGTCGTGTGGCACCCCATGACGGGCCACCTGCTGCGGCGGCTTCCCCGCCCCGA 456
                      *** ***  * * *** ********** *** ** *** ***** **     * *  ** 

consensus_2560#0      CACCCTCTGCACGTT---CGCCACCGCCGCCGTGCTCTGCGCCGT-GCC-----CGGCTG 492
consensus_2560#1      CGTCCCGTACCTCTTGTACTACAACGCCGCGGTGCTCTGCGCCGCCGCCGCCGCCGGCTG 516
                      *  **  * *   **   *  ** ****** *************  ***     ******

consensus_2560#0      CGACCACCACGACTGCCACGGAGGCCCCTTCGTCTTGGTCTTCGTCGGCAACGACGAGGA 552
consensus_2560#1      CGACCACCTCGACTGCCACGAGGGCCCCTTCCGCGTCGTCGTGGTGGGCACCGAGGAGGA 576
                      ******** ***********  *********  * * *** * ** **** *** *****

consensus_2560#0      CGACGACGGGGAGGAGATCGCGTCGGCATCCTCTTACTCGTCCGAGACCGGGACATGGAC 612
consensus_2560#1      CAACGAGGCGTGGGCGACCGTGT---ACTCGTCGGAGTCCGACGAGTGGAGCCCACCGAC 633
                      * **** * *  ** ** ** **     ** **  * **   ****    *  **  ***

consensus_2560#0      CGCCGCTTCCACCGTCCACCATGACGATTCCCTCGAACTCGAAAGCAAGCCCAGCGTCCT 672
consensus_2560#1      CTCCGCTCGCCTCGCCCGAGGACCCGAGTTCTGCG---TCGAGGGCAAGCCCGCCACCCT 690
                      * *****  *  ** **       *** * *  **   ****  ********  *  ***

consensus_2560#0      CGCCGGAGACGCGGTCCACTTCCTCACCTACTTCGGCAAAGCCATCCTGCGCTACGACCT 732
consensus_2560#1      CATCGGAGATTCGCTCTACTTCGCCCTCGTGTTTGGTATCGGAGTCGTCAAGTTCGACAT 750
                      *  ******  ** ** *****  *  *   ** ** *  *   ** *    * **** *

consensus_2560#0      CACCAAGCTGGAACTCTCGGTGATCCTCCCGCCGGTGGCGTACGGGGACGGCGACGCTCT 792
consensus_2560#1      GAAGCGCCATCGCCTCTCCCTCATCGATCCGCCGGCTGAGCTCGACGATGGCTTCGTGCT 810
                       *     *     *****  * ***   *******  * *  **  ** ***  **  **

consensus_2560#0      CCTCATGACGGCGGAGGACGGCGAGCTGGGGCTCGCCCTCTTCGACGGCGAGGCCTCCAT 852
consensus_2560#1      CATGCCGCTGGACAACGATGGCGTGCTTGGGCTCGCGGCCGTGGAGGATCACAGCCTCCT 870
                      * *   *  **   * ** **** *** ********   * * ** *   *   *  * *

consensus_2560#0      CCACCTCTGGGCGAGGGTGGCGGGT---------------------GCAGGGTGGGTGCG 891
consensus_2560#1      CTCTGTGTGGTCAATGGATGTGAGCCTGGATCATGGACATGGTGTGGCAAATTGGGAGAA 930
                      *    * *** * * **  * * *                      ***   **** *  

consensus_2560#0      GCGCAATGTGATCGACCTCTACGCTGTTCTCCCCTTCTTTGATC-CTGTACACTCGCTGT 950
consensus_2560#1      GTGCAGGGTCATTGAGCTAGACAGTCTGCTACCAAATCTTGATCACTCTAC-CCCAGTGC 989
                      * ***  ** ** ** **  **  * * ** **     ****** ** *** * *  ** 

consensus_2560#0      CCCTGGTTGGCTTCGCGGAGGGCACCGACATCATCTTCCTCCACGCCATTCATGGCGACT 1010
consensus_2560#1      TACCAATTGGATTTGTGGAGGGTGCCAATATCATCTTCCTGAGAACAGATGCGGGTGTCT 1049
                        *   **** ** * ******  ** * ***********     *   *   ** * **

consensus_2560#0      ACAGGATGGAGCTCAAGTCACTGCAGATCAGCAAGCTGTGGGAGAAGGACAGATGCTTCA 1070
consensus_2560#1      TCACACTTGAGCTCAGATCAATGCGTGTCACCAAGGTGTGCAAGATGGGTTCTT-CTACG 1108
                       **   * *******  *** ***   *** **** ****  *** **     * ** * 

consensus_2560#0      ATATCTTCCCCTACATGAGCTTCTTCGTTCCAGGTACATCCTTTACCAATTTGCTAGCAT 1130
consensus_2560#1      CTGTCGTGCCGTACACGAGCTTCTACATTCCTGGTG--TCCATCTCCAGC--AGCAGCAC 1164
                       * ** * ** **** ******** * **** ***   *** *  ***       **** 

consensus_2560#0      TAGGATTTGGGGATCGTTCAGTTCAAAGTTTCAGAATGGAGCATGCCTCTTGCTCAATTC 1190
consensus_2560#1      AGCGGACCTCAGATCAGT------AATGGCCGGGCATGGGGATCGCAGGCTGCTAACATG 1218
                         *       ****  *      ** *     * **** *   **    **** *  * 

consensus_2560#0      ACCAATCGTGATTCAGGGATATCTTTTCTGTGTGTCTCAGACCTTCCGAAAGGAAAAA-A 1249
consensus_2560#1      AGGCGTGGCAGCAGTGAGCAGCCGAGAGAGCGTGCTCCACTGCATCAGCAGCGACGGGCA 1278
                      *    * *       * *    *      * ***   **   * ** * *  **     *

consensus_2560#0      GAATGTTCAGTATGTTTCTGACGGTGACATGAAAACAATGTTGAATATACTTGTTTGGCT 1309
consensus_2560#1      GGACGGCCGGTGAACAGCCAACGTCCTACTGGTGATATGGTCCGTTCTTCAGGCCGTGCT 1338
                      * * *  * **      *  ***      **   * *  **    * * *  *    ***

consensus_2560#0      CATA-ATTAGCATCAATCAGATAGTTATAAAAAGTTCTGAAAATAATTGATAACACTGAT 1368
consensus_2560#1      AGCAGATTGGCATC--TCAAGTGC---------GGCCTCCATGGAGACCCTAATGATTCG 1387
                         * *** *****  ***  *           *  **  *   *     ***   *   

consensus_2560#0      AAAAGAGGGATTCATTGATATTCAGTACTAGATTCAGTATGCTTCAGAATTCAGAGAGTG 1428
consensus_2560#1      CAAGGTGGCAATAGCTGACAAT-AATGTTTAATCTATCGTGC-----AATTTACAG-GTG 1440
                       ** * ** * *   *** * * * *  *  **  *   ***     **** * ** ***

consensus_2560#0      ACATGAAAACATTTTTTTGGATATTTGGTTGGTT-CACAAGTAATACTAGAATGGGCGAC 1487
consensus_2560#1      GTATATTGCTAATCGTCGGT---TTTAGTCATTTGTGCGATCAAGA--AGAATATCTTAT 1495
                        **      * *  *  *    *** **   **   * *  ** *  *****     * 

consensus_2560#0      GATAATGGATTGAGAGAAGTATATGTGACACTTGGAACTTTAACTTGTTAAGGATCCACT 1547
consensus_2560#1      GGTTTTGAATGCATTGTCA-GTACAGAATATCTAAACATGGAAAGAGC---AGATTAACT 1551
                      * *  ** **  *  *     **    * *  *  *  *  **   *     ***  ***

consensus_2560#0      AGAATGGGCAGATATATTATTCTGATAAACCTTTTTTGTGTGTTGACAATAACGAT-TAT 1606
consensus_2560#1      GAGAGGAGTGAGAGCTCTATCTCGT---ATCCGCTAACTGAATTTCCAGTTATAACATCC 1608
                         * * *         ***   *    * *   *   **  **  ** * *  *  *  

consensus_2560#0      AACTTGTCTGCACCCTTTTCAGGTCGTGATAAGACAAATTGCCATCGCCAGCAATTGCAG 1666
consensus_2560#1      AATTTGTTTATGGGCTTTCCCA-TTGTCATACTGCAAGTC----TGGTGAATGTT----- 1658
                      ** **** *     **** *   * ** ***   *** *     * *  *    *     

consensus_2560#0      CAGTAAACTAGTAGCAAACAATGTGTCCAAATTTTGCTAATCTGTTGGGTTCAATTAAGC 1726
consensus_2560#1      ------------------------------------------------------------
                                                                                  

consensus_2560#0      GTCTTGTTGTTGGTATCCTAGGAGGTCTTGTTTATTTACTTGAAGCTAGTGATATGGAAA 1786
consensus_2560#1      ------------------------------------------------------------
                                                                                  

consensus_2560#0      ACTCTGGACTGAAGGTGATGCATCCCATCTTTGCTGATCTTGGCCTTAGTTCAAGTTGGT 1846
consensus_2560#1      ------------------------------------------------------------
                                                                                  

consensus_2560#0      TGTTTTCACTTTATTTCATGTCAATCTTGCTGTCAAGCTGTAATAATTTGCAAAACTAGC 1906
consensus_2560#1      ------------------------------------------------------------
                                                                                  

consensus_2560#0      ACAATGTCTTCAGGATGTCGAAGAATGTAAGACGTTCTGGCTGTTTGCTAAAACTGATGG 1966
consensus_2560#1      ------------------------------------------------------------
                                                                                  

consensus_2560#0      GATATGGTTGGTTCATAAGTAATACTAATTCAGCAACATTAACAAAACGGTGATGATAAT 2026
consensus_2560#1      ------------------------------------------------------------
                                                                                  

consensus_2560#0      GTGCTTGGGGAAAAGTATATGTGACACTGGGTACTTTAACTTGTCGAGGATCAACTAGAA 2086
consensus_2560#1      ------------------------------------------------------------
                                                                                  

consensus_2560#0      TGGGCAAGATATTTTGTTCTGTTATCATTTTCTGTCTGTTGACAATGCTTGTTTTTGGTA 2146
consensus_2560#1      ------------------------------------------------------------
                                                                                  

consensus_2560#0      CCTTTTGTCAGTAGTAGGAATGCTCTCTCAAAATACTTTGTGAATATTGGTTGTAAAACG 2206
consensus_2560#1      ------------------------------------------------------------
                                                                                  

consensus_2560#0      ATTATAACTTTTCTGCATCTTTTTCAGGTCGTGATAGAAACAAATTGCCATCTCCAACAA 2266
consensus_2560#1      ------------------------------------------------------------
                                                                                  

consensus_2560#0      TTATAGCATCAATTTAGCAAACAAAATGGGTCCAAATTATGCTAATACGTCAGATCGAGC 2326
consensus_2560#1      ------------------------------------------------------------
                                                                                  

consensus_2560#0      CTCTAGCTGTTGGCCTCTTGGTTGATTACTTGAAGCTAGTGATGTGCAAAACTGTTGACT 2386
consensus_2560#1      ------------------------------------------------------------
                                                                                  

consensus_2560#0      GAAGCTGATGCATCCCTTCTTTGCTGCTTGGTTAGTAGTCATAAGAAATTTGATAGGTTG 2446
consensus_2560#1      ------------------------------------------------------------
                                                                                  

consensus_2560#0      AGAGGATTCTTCAGAAATTTCTTTTGGTGTTGCTGTGAGTGCTTTATTACACTGCTAAAT 2506
consensus_2560#1      ------------------------------------------------------------
                                                                                  

consensus_2560#0      GAAGAGACGATTTCTTATTTTTGGTGTGTGTGTACTGTGTGTCTGTGTGGTGTGTCATTC 2566
consensus_2560#1      ------------------------------------------------------------
                                                                                  

consensus_2560#0      CATTAAGGAGTTCAGACACAGACACACAAAAGCATGGTGTGTCATTCCATTAAGGAGTTC 2626
consensus_2560#1      ------------------------------------------------------------
                                                                                  

consensus_2560#0      AGGCCCTGTTTAGTTCCCACGCAAAAAATTTTCACCATGTCACAATGTTTGGACACATGC 2686
consensus_2560#1      ------------------------------------------------------------
                                                                                  

consensus_2560#0      ATGGAGTATTAAATATAGAAAA 2708
consensus_2560#1      ----------------------
                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)